BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148098.6 - phase: 0
(556 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC80115 similar to SP|Q9SAF5|ALAB_ARATH Potential phospholipid-t... 56 3e-08
TC76900 similar to GP|393707|emb|CAA47926.1| acetyl-CoA acyltra... 44 1e-04
TC86598 similar to GP|1129145|emb|CAA53078.1 acetyl-CoA C-acyltr... 41 0.001
TC88844 similar to GP|20147219|gb|AAM10325.1 At1g59820/F23H11_14... 38 0.009
TC84439 weakly similar to GP|6539574|dbj|BAA88191.1 Similar to c... 37 0.020
AW774343 similar to GP|6539574|dbj Similar to chromaffin granule... 36 0.044
TC80650 weakly similar to PIR|T01281|T01281 probable leucine-ric... 33 0.22
BQ137786 weakly similar to GP|15451563|gb| Putative exonuclease ... 32 0.84
TC78906 similar to GP|18377616|gb|AAL66958.1 unknown protein {Ar... 30 1.9
TC89081 similar to GP|15982743|gb|AAL09712.1 AT5g17920/MPI7_60 {... 30 3.2
TC87004 similar to GP|9294061|dbj|BAB02018.1 WD40-repeat protein... 30 3.2
AW774314 30 3.2
TC87638 similar to GP|14190457|gb|AAK55709.1 At2g20820/F5H14.21 ... 30 3.2
TC88645 similar to PIR|S62700|S62700 photoassimilate-responsive ... 29 4.1
TC77025 similar to GP|10334495|emb|CAC10209. putative extracellu... 28 9.2
>TC80115 similar to SP|Q9SAF5|ALAB_ARATH Potential phospholipid-transporting
ATPase 11 (EC 3.6.3.1) (Aminophospholipid flippase 11).,
partial (31%)
Length = 1276
Score = 56.2 bits (134), Expect = 3e-08
Identities = 32/69 (46%), Positives = 40/69 (57%)
Frame = +2
Query: 66 IPYKVSKLANDQQLNMSSKPWVFTSDTMETTLNIGSTCSLLGPGMHYIIICSTTPQIIFL 125
+P + KLA K WV T D MET +NIG CSLL GM III S TP+I L
Sbjct: 107 VPECIDKLAQ-----AGIKLWVLTGDKMETAINIGFACSLLRQGMKQIIINSDTPEIKTL 271
Query: 126 KEVEDMSTA 134
+++ED S +
Sbjct: 272 EKMEDKSAS 298
>TC76900 similar to GP|393707|emb|CAA47926.1| acetyl-CoA acyltransferase
{Cucumis sativus}, partial (96%)
Length = 1780
Score = 44.3 bits (103), Expect = 1e-04
Identities = 20/44 (45%), Positives = 31/44 (70%)
Frame = +3
Query: 134 AANMCLMQRRMTIDRGSPILEMFKSFAIVGVAHAVMGVGPSKSL 177
A + LM+R + + +G PIL +F+SF VGV A+MGVGP+ ++
Sbjct: 951 AGAVLLMKRSIAMQKGLPILGVFRSFVAVGVDPAIMGVGPAAAI 1082
>TC86598 similar to GP|1129145|emb|CAA53078.1 acetyl-CoA C-acyltransferase
{Mangifera indica}, partial (89%)
Length = 1534
Score = 41.2 bits (95), Expect = 0.001
Identities = 23/50 (46%), Positives = 31/50 (62%)
Frame = +1
Query: 134 AANMCLMQRRMTIDRGSPILEMFKSFAIVGVAHAVMGVGPSKSLESFYEI 183
AA + LM+R + + +G PIL +F+SF+ VGV AVMG S S EI
Sbjct: 922 AAAVLLMKRSVAVQKGLPILGIFRSFSAVGVDPAVMGCWSSFCYSSCSEI 1071
>TC88844 similar to GP|20147219|gb|AAM10325.1 At1g59820/F23H11_14
{Arabidopsis thaliana}, partial (44%)
Length = 1786
Score = 38.1 bits (87), Expect = 0.009
Identities = 20/47 (42%), Positives = 26/47 (54%)
Frame = +2
Query: 84 KPWVFTSDTMETTLNIGSTCSLLGPGMHYIIICSTTPQIIFLKEVED 130
K WV T D +ET +NI C+L+ M +I S T I +EVED
Sbjct: 149 KIWVLTGDKIETAINIAYACNLINNEMKQFVISSETDAI---REVED 280
>TC84439 weakly similar to GP|6539574|dbj|BAA88191.1 Similar to chromaffin
granule ATPase II homolog (U75321) {Oryza sativa
(japonica cultivar-group)}, partial (16%)
Length = 801
Score = 37.0 bits (84), Expect = 0.020
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +2
Query: 84 KPWVFTSDTMETTLNIGSTCSLLGPGMHYIIICSTTPQ 121
K WV T D ET ++IG +C LL M I+I T+ +
Sbjct: 485 KVWVLTGDKQETAISIGLSCKLLSADMQQIVINGTSEE 598
>AW774343 similar to GP|6539574|dbj Similar to chromaffin granule ATPase II
homolog (U75321) {Oryza sativa (japonica
cultivar-group)}, partial (7%)
Length = 616
Score = 35.8 bits (81), Expect = 0.044
Identities = 15/36 (41%), Positives = 21/36 (57%)
Frame = +1
Query: 86 WVFTSDTMETTLNIGSTCSLLGPGMHYIIICSTTPQ 121
WV T D ET ++IG +C LL M I+I T+ +
Sbjct: 280 WVLTGDKQETAISIGLSCKLLSADMQQIVINGTSEE 387
>TC80650 weakly similar to PIR|T01281|T01281 probable leucine-rich-repeat
protein At2g19330 [imported] - Arabidopsis thaliana,
partial (37%)
Length = 847
Score = 33.5 bits (75), Expect = 0.22
Identities = 25/117 (21%), Positives = 54/117 (45%)
Frame = +3
Query: 40 LLDLKGALTHQLVTQIWKVQLRCIGSIPYKVSKLANDQQLNMSSKPWVFTSDTMETTLNI 99
L+ L + +H + + V+L C+ S+P + L N + LN+S S +I
Sbjct: 24 LVCLPRSTSHMMTLMVLDVRLNCLRSLPDDLENLVNLETLNVSQNFRYLES----LPYSI 191
Query: 100 GSTCSLLGPGMHYIIICSTTPQIIFLKEVEDMSTAANMCLMQRRMTIDRGSPILEMF 156
G SL+ + Y I + I L++++ +S N + + +++G +++ +
Sbjct: 192 GLLLSLVELDVSYNNIKTLPDSIGCLQKLQKLSVEGNPLISPPQEVVEQGLHVVKEY 362
>BQ137786 weakly similar to GP|15451563|gb| Putative exonuclease {Oryza
sativa} [Oryza sativa (japonica cultivar-group)],
partial (17%)
Length = 707
Score = 31.6 bits (70), Expect = 0.84
Identities = 18/58 (31%), Positives = 29/58 (49%)
Frame = +3
Query: 267 VAWYKNKHNRKGLVSIVHSSYLIFYCYTRVIDKVYENWKYWMSWMTVCNLEDKLGLHG 324
+ WY R ++IV+ + +IF+C + +Y+ Y SWMT L +GL G
Sbjct: 306 IRWYIPHAIRIDRLTIVYIAKIIFHCSILIYVHIYKFSGY--SWMTSAQLHIDVGLQG 473
>TC78906 similar to GP|18377616|gb|AAL66958.1 unknown protein {Arabidopsis
thaliana}, partial (43%)
Length = 1746
Score = 30.4 bits (67), Expect = 1.9
Identities = 28/124 (22%), Positives = 53/124 (42%), Gaps = 12/124 (9%)
Frame = +3
Query: 342 MFYHEETIEEIQAVEVRMMKRTRRKKMLPLSW--------VQLIFVLQFLLSVQDISASS 393
MF ++ +Q + + K + K L L+ VQ + FLL + + +
Sbjct: 357 MFLQGRYLKTMQVINLMTAKNFWKMKTLNLNTNFLN*PIPVQTT*IQFFLLLLSPLKSIY 536
Query: 394 QIDTLEFSHFQIIVPLEVDSLNSQIFLTLYHGYCISGG----NSFEFPFMFTHWSLTMLK 449
I L+ I+ E + + +IF+TL H C++ + +PF+ HW + +K
Sbjct: 537 NI-ILKKGALVILTWQEWELMREEIFVTLKHVMCLTSTFLT*SLQAYPFVEIHWMMMSVK 713
Query: 450 LTAY 453
+Y
Sbjct: 714 QPSY 725
>TC89081 similar to GP|15982743|gb|AAL09712.1 AT5g17920/MPI7_60 {Arabidopsis
thaliana}, partial (40%)
Length = 1219
Score = 29.6 bits (65), Expect = 3.2
Identities = 15/38 (39%), Positives = 21/38 (54%)
Frame = +2
Query: 64 GSIPYKVSKLANDQQLNMSSKPWVFTSDTMETTLNIGS 101
GSIP VSKLA+ + S PW+ + T+L + S
Sbjct: 809 GSIPIVVSKLASTPR*TQPSLPWLRPQNASATSLQVES 922
>TC87004 similar to GP|9294061|dbj|BAB02018.1 WD40-repeat protein
{Arabidopsis thaliana}, partial (21%)
Length = 775
Score = 29.6 bits (65), Expect = 3.2
Identities = 29/103 (28%), Positives = 46/103 (44%), Gaps = 7/103 (6%)
Frame = +2
Query: 381 QFLLSVQDISASSQIDTLEFSHFQIIVPLEVDSLNSQ-----IFLTLYHGYCISGGNSFE 435
+F+L + S +ID L++S I + ++ + ++L++Y IS
Sbjct: 353 EFVLKKEFRVLSGRIDDLQWSPDGIRIVASGEAKGNSFVRAFMYLSIYSFITIS------ 514
Query: 436 FPFMFTHWSLTMLKLTAYTA--QSFLASKLGLSAVLHLIVKGL 476
FPF+F H+ L L T Y S L L L LHL + L
Sbjct: 515 FPFLFFHFKLI*LHFTIYRIGYHSSLTLHLHLHLHLHLHISNL 643
>AW774314
Length = 206
Score = 29.6 bits (65), Expect = 3.2
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2
Query: 283 VHSSYLIFYCYTRVIDKVYENWKYWMSWMTVCN 315
V + L+FYC T + + K+W +W CN
Sbjct: 2 VEITQLLFYCKTSLFILTL*HLKFWWAWSLTCN 100
>TC87638 similar to GP|14190457|gb|AAK55709.1 At2g20820/F5H14.21
{Arabidopsis thaliana}, partial (33%)
Length = 750
Score = 29.6 bits (65), Expect = 3.2
Identities = 31/127 (24%), Positives = 49/127 (38%), Gaps = 7/127 (5%)
Frame = -1
Query: 274 HNRKGLVSIVHSSYLIFYCYTRVIDKVYENWKYWMSWMTVCNLEDKLGLHGIDNDTIYVV 333
+NRK I Y F CY +K+ +NW + +DK H +D++ + VV
Sbjct: 507 NNRKLKAVISPKPY--FKCYANNTNKIAQNWLLF--------TKDK--NHNLDSNFLAVV 364
Query: 334 -------WVQSLLEWMFYHEETIEEIQAVEVRMMKRTRRKKMLPLSWVQLIFVLQFLLSV 386
W +LL + EE + ++ + + PL W Q I L S
Sbjct: 363 IKISGLAWFCNLLFLLATSEELVTTVEE*SPSSQRSNHKMFFFPLRWRQWILPNVHLWSS 184
Query: 387 QDISASS 393
I +S
Sbjct: 183 MRIGGTS 163
>TC88645 similar to PIR|S62700|S62700 photoassimilate-responsive protein
PAR-1c precursor - common tobacco, partial (90%)
Length = 1164
Score = 29.3 bits (64), Expect = 4.1
Identities = 18/87 (20%), Positives = 40/87 (45%), Gaps = 3/87 (3%)
Frame = -1
Query: 174 SKSLESFYEILDRLPILFNCVSAPCCLALNFMANE---IIIFLSNVATNDLVPGHLVYND 230
S S+ + + P+LF C S L L+ ANE ++ F ++ + +
Sbjct: 318 SASISNVLHVYASSPVLFTCFSRTHLLLLDETANEHVSLLRFSHSIPPRVPCTAREIARE 139
Query: 231 TMTLIMKVELKELCELIDTFSKLYVKL 257
++ ++K+ L+ +C + + F + K+
Sbjct: 138 AISKLLKINLEAICLVEERFLNNWPKV 58
>TC77025 similar to GP|10334495|emb|CAC10209. putative extracellular dermal
glycoprotein {Cicer arietinum}, complete
Length = 1513
Score = 28.1 bits (61), Expect = 9.2
Identities = 14/55 (25%), Positives = 28/55 (50%), Gaps = 11/55 (20%)
Frame = +2
Query: 267 VAWYKNKHN----------RKGLVSIVHSS-YLIFYCYTRVIDKVYENWKYWMSW 310
++W++N N RK +V + HS ++I + Y+ ++K+Y W+ W
Sbjct: 185 ISWHRNS*NKFQSSH*SCWRKSMV*L*HSL*FIIIHSYSMWLNKMYRYCMCWLQW 349
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.326 0.137 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,776,064
Number of Sequences: 36976
Number of extensions: 330949
Number of successful extensions: 2492
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 2471
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2490
length of query: 556
length of database: 9,014,727
effective HSP length: 101
effective length of query: 455
effective length of database: 5,280,151
effective search space: 2402468705
effective search space used: 2402468705
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 61 (28.1 bits)
Medicago: description of AC148098.6