TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC147964.8 + phase: 0 
         (992 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

AL370156 similar to GP|20466826|g unknown protein {Arabidopsis t...   218  9e-57
TC91100 similar to GP|20466826|gb|AAM20730.1 unknown protein {Ar...   100  3e-21
BG644947 similar to GP|2462838|gb| unknown protein {Arabidopsis ...    44  2e-04
BI273249 weakly similar to GP|2462838|gb| unknown protein {Arabi...    35  0.14
BG449558                                                               33  0.71
BF519278                                                               32  1.2
AW697370 similar to GP|17429075|emb PROBABLE NADH DEHYDROGENASE ...    31  2.1
TC77416 similar to GP|18139887|gb|AAL60196.1 O-linked N-acetyl g...    31  2.7
BQ141237 similar to GP|2462838|gb|A unknown protein {Arabidopsis...    30  6.0
TC76875 weakly similar to GP|21554666|gb|AAM63650.1 putative ace...    30  6.0

>AL370156 similar to GP|20466826|g unknown protein {Arabidopsis thaliana},
           partial (14%)
          Length = 437

 Score =  218 bits (555), Expect = 9e-57
 Identities = 106/145 (73%), Positives = 127/145 (87%)
 Frame = +3

Query: 497 SILDTALLQAMLLTGQPSMAENLLRVLNYCDLKICEEILQEGSYHVSLVELYKCNSMHRE 556
           SILDTALLQA+LLTGQ S A  +LR +NYCD+KICEEIL++G+ + +L+ELYKC S+HR+
Sbjct: 3   SILDTALLQALLLTGQSSAALEILRGVNYCDMKICEEILRKGNLNAALLELYKCKSLHRQ 182

Query: 557 ALEIINKSVKESESSQSKIAHRFKPEAIIEYLKPLCELDTTLVLEYSMLVLESCPTQTIE 616
           ALE+++K V ES SSQS+I  RFKPE I+EYLKPLCE D  LVLE+SMLVLESCP+QTIE
Sbjct: 183 ALELLHKLVDESRSSQSEITQRFKPEDIVEYLKPLCETDPILVLEFSMLVLESCPSQTIE 362

Query: 617 LFLSGNIPADMVNLYLKQHAPNLQA 641
           LFLSGNIPADMVN YLKQH+PN+QA
Sbjct: 363 LFLSGNIPADMVNSYLKQHSPNMQA 437


>TC91100 similar to GP|20466826|gb|AAM20730.1 unknown protein {Arabidopsis
           thaliana}, partial (5%)
          Length = 592

 Score =  100 bits (249), Expect = 3e-21
 Identities = 47/64 (73%), Positives = 54/64 (83%)
 Frame = +1

Query: 927 KDELYNKRKAVIKISDDNMCSLCHKKIGTSVFAVYPNGKTLVHFVCFRDSQSMKAVAKVS 986
           K  LY +RKAV+K++ D+MCSLC KKIGTSVFAVYPNG TLVHFVCF+DSQ MKAV K S
Sbjct: 13  KMNLYCQRKAVVKVTSDSMCSLCRKKIGTSVFAVYPNGSTLVHFVCFKDSQKMKAVTKGS 192

Query: 987 PLKK 990
            L+K
Sbjct: 193 QLRK 204


>BG644947 similar to GP|2462838|gb| unknown protein {Arabidopsis thaliana},
           partial (13%)
          Length = 749

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 24/69 (34%), Positives = 37/69 (52%)
 Frame = +1

Query: 690 SPKRKKLLSALESISGYNPEALLKLLPSDALYEERAILLGKMNQHELALSLYVHKLHVPE 749
           +P R++L   L+S   Y+PE +L L+    L+ E+AIL  ++ Q  L L +   KL   E
Sbjct: 541 TPVRERLQFFLQSSDLYDPEEVLDLIEGSELWLEKAILYRRLGQETLVLQILALKLEDSE 720

Query: 750 LALSYCDHV 758
            A  YC  +
Sbjct: 721 AAEQYCAEI 747


>BI273249 weakly similar to GP|2462838|gb| unknown protein {Arabidopsis
           thaliana}, partial (16%)
          Length = 698

 Score = 35.0 bits (79), Expect = 0.14
 Identities = 21/62 (33%), Positives = 32/62 (50%)
 Frame = +3

Query: 690 SPKRKKLLSALESISGYNPEALLKLLPSDALYEERAILLGKMNQHELALSLYVHKLHVPE 749
           +P R++L   L+S   Y+P+ +L L+    L+ E AIL   + Q  L L +   KL   E
Sbjct: 510 TPVRERLQFFLQSSXLYDPKXVLDLIEGSELWLEXAILYXXLGQXTLXLQILALKLKNSE 689

Query: 750 LA 751
            A
Sbjct: 690 TA 695


>BG449558 
          Length = 660

 Score = 32.7 bits (73), Expect = 0.71
 Identities = 31/108 (28%), Positives = 51/108 (46%), Gaps = 5/108 (4%)
 Frame = +2

Query: 464 VGNNFESYNSNRFKKINKRHGSIPVSSEAREMASILDTALLQAMLLTGQPSMAE----NL 519
           V NN    +    K+ N+ H S P+     E   +L+   L+  +  GQPS+A     ++
Sbjct: 188 VQNNTNLNHIVENKERNQIHASFPIL----ETLVLLNLKNLEH-IFHGQPSIASFGKLSV 352

Query: 520 LRVLNYCDLK-ICEEILQEGSYHVSLVELYKCNSMHREALEIINKSVK 566
           ++V N   LK I    + +  YH+S +++ +CNSM        N S K
Sbjct: 353 IKVKNCVQLKYIFSYPVVKELYHISKIKVCECNSMKEVVFGDNNSSAK 496


>BF519278 
          Length = 620

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 28/126 (22%), Positives = 60/126 (47%)
 Frame = +3

Query: 680 SEQKWDEKVYSPKRKKLLSALESISGYNPEALLKLLPSDALYEERAILLGKMNQHELALS 739
           S++ WDEK+ + K+           G++ EA+++     A      +LL  +++  L +S
Sbjct: 84  SKKLWDEKIDTFKKW----------GWSDEAIIR-----AFRCRPELLLASIDKINLVMS 218

Query: 740 LYVHKLHVPELALSYCDHVYESAHKSSVKSLSNIYLMLLQIYLNPRRTTKNYEKKISNLL 799
            +V++L    LAL+   H++  +    +   +++   LL          K  +KK ++L+
Sbjct: 219 FWVNQLGWNSLALTKRPHIFSYSLDKRITPRASVLQFLLM---------KGLQKKNASLV 371

Query: 800 SPRNKS 805
           +P + S
Sbjct: 372 TPLSYS 389


>AW697370 similar to GP|17429075|emb PROBABLE NADH DEHYDROGENASE I (CHAIN G)
           OXIDOREDUCTASE PROTEIN {Ralstonia solanacearum}, partial
           (2%)
          Length = 574

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 18/58 (31%), Positives = 26/58 (44%)
 Frame = +2

Query: 83  FLLSLSESIAFHKLPTFETIAVITKAKGANAFCWDEHRGFLCFARQKRVCIFRRDGGR 140
           FLL  S S+     P   T+   +K+K  +  CW     FLC       C+++ DG R
Sbjct: 35  FLLLRSISLPLLHPPAIRTLWTTSKSKLLSCCCWTSPCNFLCLP-----CLWQHDGWR 193


>TC77416 similar to GP|18139887|gb|AAL60196.1 O-linked N-acetyl glucosamine
           transferase {Arabidopsis thaliana}, partial (94%)
          Length = 3465

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 11/36 (30%), Positives = 24/36 (66%)
 Frame = +2

Query: 320 LPPEDSNLRAAKEDSIHIRYAHYLFDNGSYEESMEH 355
           L P  +N  +  ++ +H+  AH ++ +GSY++++EH
Sbjct: 350 LLPLRANDSSEVDEDLHLTLAHQMYKSGSYKKALEH 457


>BQ141237 similar to GP|2462838|gb|A unknown protein {Arabidopsis thaliana},
           partial (10%)
          Length = 352

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 21/80 (26%), Positives = 36/80 (44%)
 Frame = +1

Query: 281 VIIALENSIHCLFPVPLGAQIVQLTAAGNFEEALSLCKLLPPEDSNLRAAKEDSIHIRYA 340
           V +A    + C   +P   QI  L    N++ A+SL + L  E   +       +H +  
Sbjct: 10  VAVATATKVVCYRKLPSVDQIKDLLRKKNYKGAISLVEELEYE-GEMSNELLSFVHAQVG 186

Query: 341 HYLFDNGSYEESMEHFLASQ 360
             L  +  +EE++ HFL S+
Sbjct: 187 FLLLFDLHFEEAVNHFLLSE 246


>TC76875 weakly similar to GP|21554666|gb|AAM63650.1 putative
           acetone-cyanohydrin lyase {Arabidopsis thaliana},
           partial (62%)
          Length = 1020

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
 Frame = -1

Query: 731 MNQHELALSLYVHKLHVPELALSYCDHVYESAHKSSV-KSLSNIY 774
           MNQHE++L+L    +H+P L L Y   V E  +K  + K L  I+
Sbjct: 129 MNQHEMSLNL---SIHLPFLVLCYVGLVREKKNKILINKGLDGIW 4


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.317    0.133    0.373 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,962,975
Number of Sequences: 36976
Number of extensions: 402204
Number of successful extensions: 2115
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 2092
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2115
length of query: 992
length of database: 9,014,727
effective HSP length: 106
effective length of query: 886
effective length of database: 5,095,271
effective search space: 4514410106
effective search space used: 4514410106
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)