BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC147964.5 + phase: 0
(447 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC77037 similar to PIR|B84652|B84652 hypothetical protein At2g25... 558 e-159
TC77654 similar to GP|22137236|gb|AAM91463.1 At2g36630/F1O11.26 ... 431 e-121
TC88574 weakly similar to GP|22137236|gb|AAM91463.1 At2g36630/F1... 231 4e-61
TC84534 weakly similar to PIR|B84652|B84652 hypothetical protein... 134 9e-32
TC91496 similar to GP|13272465|gb|AAK17171.1 unknown protein {Ar... 107 1e-23
TC88695 similar to GP|13272465|gb|AAK17171.1 unknown protein {Ar... 95 5e-20
TC82901 similar to GP|22137236|gb|AAM91463.1 At2g36630/F1O11.26 ... 77 1e-14
TC77790 similar to GP|15294268|gb|AAK95311.1 At1g32920/F9L11_25 ... 33 0.29
TC90963 similar to PIR|A84431|A84431 probable C2H2-type zinc fin... 33 0.29
AW585119 32 0.38
TC89959 similar to GP|15795137|dbj|BAB02515. transporter-like pr... 25 1.7
BF646944 similar to GP|12597808|gb| hypothetical protein {Arabid... 30 2.5
TC78466 30 2.5
TC87480 similar to GP|6277254|dbj|BAA86284.1 geranylgeranyl pyro... 29 3.2
TC85524 similar to SP|P93508|CRTC_RICCO Calreticulin precursor. ... 29 4.2
TC87250 similar to GP|10140799|gb|AAG13629.1 putative steroid me... 29 4.2
TC82819 homologue to PIR|T06753|T06753 zinc finger protein F15B8... 28 5.5
TC88483 similar to GP|8843859|dbj|BAA97385.1 contains similarity... 28 5.5
AW585086 28 7.2
BQ751108 28 9.4
>TC77037 similar to PIR|B84652|B84652 hypothetical protein At2g25740
[imported] - Arabidopsis thaliana, partial (33%)
Length = 2114
Score = 558 bits (1439), Expect = e-159
Identities = 277/427 (64%), Positives = 341/427 (78%), Gaps = 7/427 (1%)
Frame = +2
Query: 23 KKTSFFWYSGESSYERVWPEMKFGWRIVVGSIVGFFGAALGSVGGVGGGGIFIPMLTLII 82
K +F W S S Y+ VWPEM+FGW+IV+GS +GF GAA GSVGGVGGGGIF+PML+LII
Sbjct: 545 KAVNFLWKSDGSGYQHVWPEMEFGWQIVLGSFIGFCGAAFGSVGGVGGGGIFVPMLSLII 724
Query: 83 GFDPKSSTALSKCMITGAAGSTVYYNLRLRHPTLDMPLIDYDLALLFQPMLMLGISIGVA 142
GFDPKSSTA+SKCMI GAA STVYYNLRLRHPTLDMP+IDYDLALL QPMLMLGISIGV
Sbjct: 725 GFDPKSSTAISKCMIMGAALSTVYYNLRLRHPTLDMPIIDYDLALLIQPMLMLGISIGVV 904
Query: 143 FNVMFADWMVTILLIILFIGTSTKALVKGIDTWKKETIMKKEAFEEAAQMLESGSTPDYA 202
FNV+F DW+VTILLI+LF+GTSTKA KG++TW KETIMKKEA A + +GS
Sbjct: 905 FNVVFPDWLVTILLIVLFLGTSTKAFFKGLETWNKETIMKKEA---ARRQESNGS----- 1060
Query: 203 SEEDYKSLP-----ADLQDEEVPLLDNIHWKELSVLMYVWVAFLIVQILK-TYSKTCSIE 256
+YK+LP A ++ +V +++N++WKE +L +VW++FL +QI K Y+ TCS
Sbjct: 1061--GEYKALPTGPNVAIEKENKVSIIENVYWKEFGLLAFVWISFLALQIAKQNYTTTCSAA 1234
Query: 257 YWLLNSLQVPIAISVTLFEAICLCKGTRVIASRGKE-ITWKFHKICLYCFCGIIAGMVSG 315
YW+LN LQ+PIA+ VT +EA L G RVIAS G + + ++ +YC G++AG+V G
Sbjct: 1235YWILNLLQIPIAVGVTAYEATALFTGRRVIASTGDQGKAFTVGQLVIYCVFGVLAGIVGG 1414
Query: 316 LLGLGGGFILGPLFLELGIPPQVASATSTFAMVFSSSMSVVQYYHLDRFPIPYASYLVLV 375
LLGLGGGF++GPLFLELG+PPQV+SAT+TFAM FSSSMSVV+YY L RFP+PYA YL LV
Sbjct: 1415LLGLGGGFVMGPLFLELGVPPQVSSATATFAMTFSSSMSVVEYYLLKRFPVPYALYLSLV 1594
Query: 376 ATIAALTGQHVVRKIIAIFGRASIIVFILAFTIFVSAISLGGVGIGNMVEKMENEEYMGF 435
ATIAAL GQH+VR++I +FGRAS+I+FILA TIF+SAISLGGVGI NMV K+ N EYMGF
Sbjct: 1595ATIAALVGQHIVRRLIILFGRASLIIFILAGTIFISAISLGGVGISNMVHKIANHEYMGF 1774
Query: 436 DNLCHHG 442
+N+C +G
Sbjct: 1775ENICKYG 1795
>TC77654 similar to GP|22137236|gb|AAM91463.1 At2g36630/F1O11.26
{Arabidopsis thaliana}, partial (94%)
Length = 1939
Score = 431 bits (1109), Expect = e-121
Identities = 216/413 (52%), Positives = 291/413 (70%), Gaps = 10/413 (2%)
Frame = +2
Query: 37 ERVWPEMKFGWRIVVGSIVGFFGAALGSVGGVGGGGIFIPMLTLIIGFDPKSSTALSKCM 96
++ WPE+K WR+ + SI+GF G+A G+VGGVGGGGIF+PMLTLIIGFD KS+ ALSKCM
Sbjct: 212 DKTWPELKPSWRLALASIIGFLGSAFGTVGGVGGGGIFVPMLTLIIGFDTKSAAALSKCM 391
Query: 97 ITGAAGSTVYYNLRLRHPTLDMPLIDYDLALLFQPMLMLGISIGVAFNVMFADWMVTILL 156
I GA+ S+V+YNLR+RHPT D+P++DYDLALLFQPMLMLGI++GVA +V+F W++T+L+
Sbjct: 392 IMGASTSSVFYNLRVRHPTKDVPILDYDLALLFQPMLMLGITVGVALSVVFPYWLITVLI 571
Query: 157 IILFIGTSTKALVKGIDTWKKETIMKKEAFEEAAQMLESGSTPDYASEEDYKSLPADLQD 216
IILFIGTS+++ KG + WK+ET++KKE + + S +E D P ++
Sbjct: 572 IILFIGTSSRSFFKGTEMWKEETLLKKEMAQAQTTFVNSRGELLIDTEYD----PLVPRE 739
Query: 217 EEVPL---LDNIHWKELSVLMYVWVAFLIVQILKTYSKTCSIEYWLLNSLQVPIAISVTL 273
E+ P+ N+ WK + VLM VWV+FL++Q++K K CS+ YW+L SLQ PIA+ V
Sbjct: 740 EKTPMQIFCSNLKWKRILVLMIVWVSFLLLQVIKNDVKVCSVWYWVLFSLQFPIALVVFW 919
Query: 274 FEAICLCKGTRVIASRGK-------EITWKFHKICLYCFCGIIAGMVSGLLGLGGGFILG 326
+EA+ L K + + G I W I CGI+ G V GLLG GGGFILG
Sbjct: 920 YEAMKLYKDYKKRMNTGNLECICEASIEWTVLHIVFCALCGILGGTVGGLLGSGGGFILG 1099
Query: 327 PLFLELGIPPQVASATSTFAMVFSSSMSVVQYYHLDRFPIPYASYLVLVATIAALTGQHV 386
PL +E+G+ PQVASAT+TF M+FSSS+SVV++Y L RFPIPYA YL V+ +A GQ
Sbjct: 1100PLLIEIGVIPQVASATATFVMMFSSSLSVVEFYLLKRFPIPYALYLFTVSVLAGFVGQLF 1279
Query: 387 VRKIIAIFGRASIIVFILAFTIFVSAISLGGVGIGNMVEKMENEEYMGFDNLC 439
VRK++ I GRASIIVFIL+ IF SA+++G +GI + ++N E+MGF C
Sbjct: 1280VRKLLRILGRASIIVFILSGVIFASALTMGVIGIERSIHMIQNHEFMGFLGFC 1438
>TC88574 weakly similar to GP|22137236|gb|AAM91463.1 At2g36630/F1O11.26
{Arabidopsis thaliana}, partial (25%)
Length = 663
Score = 231 bits (589), Expect = 4e-61
Identities = 106/175 (60%), Positives = 145/175 (82%)
Frame = +3
Query: 8 AERVLEDEKPEIVVMKKTSFFWYSGESSYERVWPEMKFGWRIVVGSIVGFFGAALGSVGG 67
A R ++ E+ +V + SF+++ + E VWP+++ GW+I+VG+++G FGA+ GSVGG
Sbjct: 144 ANRTIKSEERSWIVNEAQSFYYHV--KANEHVWPDIRLGWQIIVGTLIGIFGASFGSVGG 317
Query: 68 VGGGGIFIPMLTLIIGFDPKSSTALSKCMITGAAGSTVYYNLRLRHPTLDMPLIDYDLAL 127
VGGGGIF+PML LIIGFD KS+TA+SKCM+TGAA STV++NL+LRHPTLD+P+IDYDL L
Sbjct: 318 VGGGGIFVPMLILIIGFDAKSATAISKCMVTGAAISTVFFNLKLRHPTLDIPMIDYDLVL 497
Query: 128 LFQPMLMLGISIGVAFNVMFADWMVTILLIILFIGTSTKALVKGIDTWKKETIMK 182
L P+++LGISIGV +V+FADWM+T+LLII+FI TS +A +KG+DTW KETI+K
Sbjct: 498 LNAPVIILGISIGVVLSVVFADWMITVLLIIVFIVTSVRAYLKGLDTWNKETIIK 662
>TC84534 weakly similar to PIR|B84652|B84652 hypothetical protein At2g25740
[imported] - Arabidopsis thaliana, partial (9%)
Length = 505
Score = 134 bits (336), Expect = 9e-32
Identities = 60/105 (57%), Positives = 85/105 (80%)
Frame = +1
Query: 336 PQVASATSTFAMVFSSSMSVVQYYHLDRFPIPYASYLVLVATIAALTGQHVVRKIIAIFG 395
PQ+ASA+++ M F++S+SV QYY L RFP+PYA YL LV+TIAA GQ ++ K++ IF
Sbjct: 1 PQLASASASLGMTFTASISVAQYYLLKRFPVPYALYLTLVSTIAAYIGQKIIDKLVNIFQ 180
Query: 396 RASIIVFILAFTIFVSAISLGGVGIGNMVEKMENEEYMGFDNLCH 440
RAS+I+F+L+FTI VSAI+LGGVGI M+++++N EYMGF+ C+
Sbjct: 181 RASLIIFVLSFTILVSAIALGGVGISRMIQRIQNNEYMGFEEFCY 315
>TC91496 similar to GP|13272465|gb|AAK17171.1 unknown protein {Arabidopsis
thaliana}, partial (31%)
Length = 672
Score = 107 bits (266), Expect = 1e-23
Identities = 60/188 (31%), Positives = 110/188 (57%), Gaps = 3/188 (1%)
Frame = +3
Query: 255 IEYWLLNSLQVPIAISVTLFEAI---CLCKGTRVIASRGKEITWKFHKICLYCFCGIIAG 311
+ YW+++S+QVP+A+ T + + + T + + + +K+ ++ ++AG
Sbjct: 9 VGYWIISSVQVPLAVVFTAWMVLRKESIQDQTLIPQVQCQNRNCPSNKL-VFPLMALLAG 185
Query: 312 MVSGLLGLGGGFILGPLFLELGIPPQVASATSTFAMVFSSSMSVVQYYHLDRFPIPYASY 371
M+ G+ G+GGG ++ PL L++GI P+V +AT +F + FSS+MS +QY L + A
Sbjct: 186 MLGGVFGIGGGMLISPLLLQVGIAPEVTAATCSFMVFFSSTMSSLQYLLLGMEHVETALI 365
Query: 372 LVLVATIAALTGQHVVRKIIAIFGRASIIVFILAFTIFVSAISLGGVGIGNMVEKMENEE 431
L ++ +A+L G VV+K+I +GR SIIVF ++ + +S + + G + E ++ +
Sbjct: 366 LAIMCFVASLLGLLVVQKVIRKYGRPSIIVFSVSIVMSLSIVLMTSFGTLKVWEDYKSGK 545
Query: 432 YMGFDNLC 439
YMGF C
Sbjct: 546 YMGFKLPC 569
Score = 29.6 bits (65), Expect = 2.5
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = +3
Query: 50 VVGSIVGFFGAALGSVGGVGGGGIFIPMLTLIIGFDPKSSTALSKCMI--TGAAGSTVYY 107
+V ++ LG V G+GGG + P+L L +G P+ + A M+ + S Y
Sbjct: 153 LVFPLMALLAGMLGGVFGIGGGMLISPLL-LQVGIAPEVTAATCSFMVFFSSTMSSLQYL 329
Query: 108 NLRLRH 113
L + H
Sbjct: 330 LLGMEH 347
>TC88695 similar to GP|13272465|gb|AAK17171.1 unknown protein {Arabidopsis
thaliana}, partial (24%)
Length = 591
Score = 95.1 bits (235), Expect = 5e-20
Identities = 46/118 (38%), Positives = 77/118 (64%), Gaps = 1/118 (0%)
Frame = +2
Query: 49 IVVGSIVGFFGAALGSVGGVGGGGIFIPMLTLIIGFDPKSSTALSKCMITGAA-GSTVYY 107
+VV I+ F +++ S GG+GGGGIFIP+LT++ G D K ++++S M+TG + + + Y
Sbjct: 239 LVVAGILCFIASSISSAGGIGGGGIFIPILTIVAGLDLKVASSISAFMVTGGSIANVICY 418
Query: 108 NLRLRHPTLDMPLIDYDLALLFQPMLMLGISIGVAFNVMFADWMVTILLIILFIGTST 165
LIDYD+AL +P ++LG+S+GV N++F +W++T L+ +F+ ST
Sbjct: 419 MFTTSTKFGGKSLIDYDIALSSEPCMLLGVSVGVICNLVFPEWLIT-LMFAVFLAWST 589
Score = 30.4 bits (67), Expect = 1.4
Identities = 20/58 (34%), Positives = 31/58 (52%), Gaps = 1/58 (1%)
Frame = +2
Query: 302 LYCFCGIIAGMVSGLLGLGGGFILGPLF-LELGIPPQVASATSTFAMVFSSSMSVVQY 358
+ CF IA +S G+GGG I P+ + G+ +VAS+ S F + S +V+ Y
Sbjct: 254 ILCF---IASSISSAGGIGGGGIFIPILTIVAGLDLKVASSISAFMVTGGSIANVICY 418
>TC82901 similar to GP|22137236|gb|AAM91463.1 At2g36630/F1O11.26
{Arabidopsis thaliana}, partial (22%)
Length = 647
Score = 77.0 bits (188), Expect = 1e-14
Identities = 44/107 (41%), Positives = 61/107 (56%), Gaps = 1/107 (0%)
Frame = +2
Query: 42 EMKFGWRIVVGSIVGFFGAALGSVGGVGGGGIFIPMLTLIIGFDPKSSTALSKCMITGAA 101
E+K WR+ + SI+GF G+A G+VGGVGGGGIF+PMLTLIIGF + + G+
Sbjct: 320 ELKPSWRLALASIIGFLGSAFGTVGGVGGGGIFVPMLTLIIGFRYQVCCCSFQMYDNGSI 499
Query: 102 GSTVYYNLRLRHPTLDMPLIDYDLALLFQPM-LMLGISIGVAFNVMF 147
+ I + + L F + MLGI++GVA NV+F
Sbjct: 500 NIFCILQPKSASSNKRCSNIGFMI*LFFFNLCFMLGITVGVALNVVF 640
Score = 64.7 bits (156), Expect = 7e-11
Identities = 32/75 (42%), Positives = 49/75 (64%)
Frame = +3
Query: 76 PMLTLIIGFDPKSSTALSKCMITGAAGSTVYYNLRLRHPTLDMPLIDYDLALLFQPMLML 135
P L L + D KS+ ALSKCMI GA+ S+V+YNLR+RHPT D+P++D + F +
Sbjct: 423 PCLLLSLVLDTKSAAALSKCMIMGASTSSVFYNLRVRHPTKDVPILDL*SSSSFSTYALC 602
Query: 136 GISIGVAFNVMFADW 150
+S+ V ++F+ +
Sbjct: 603 LVSLLVLLLMLFSPY 647
>TC77790 similar to GP|15294268|gb|AAK95311.1 At1g32920/F9L11_25
{Arabidopsis thaliana}, partial (23%)
Length = 1206
Score = 32.7 bits (73), Expect = 0.29
Identities = 16/63 (25%), Positives = 30/63 (47%)
Frame = +1
Query: 181 MKKEAFEEAAQMLESGSTPDYASEEDYKSLPADLQDEEVPLLDNIHWKELSVLMYVWVAF 240
+ +A +EA + +G P ++ + K +PA + P LD +H E V W+ F
Sbjct: 184 VNSKANKEATESKTTGKNPKTSTPSEDKQIPAPSRQRFAPELDGLHCFEFIVPSE*WIQF 363
Query: 241 LIV 243
+ +
Sbjct: 364 VTI 372
>TC90963 similar to PIR|A84431|A84431 probable C2H2-type zinc finger protein
[imported] - Arabidopsis thaliana, partial (21%)
Length = 1769
Score = 32.7 bits (73), Expect = 0.29
Identities = 21/102 (20%), Positives = 45/102 (43%), Gaps = 1/102 (0%)
Frame = +3
Query: 120 LIDYDLALLFQPMLMLGISIGVAFNVMFADWMVTILLIILFIGTSTKALVKGIDTWKKET 179
++ + LLF+ + M + V F + +I + F+G +K + TW+
Sbjct: 462 ILQFRFILLFKDICMSRFTY--TSRVFFLIFFSSIYIFFFFVGLRVLLSIKMLVTWEGSI 635
Query: 180 IMKKEAFEEAAQML-ESGSTPDYASEEDYKSLPADLQDEEVP 220
I K ++ L + S+P +SE ++ + P + + +P
Sbjct: 636 IQKLNHYKHQLHALSRTASSPSPSSETNFNTCPWQTRLQAIP 761
>AW585119
Length = 515
Score = 32.3 bits (72), Expect = 0.38
Identities = 17/45 (37%), Positives = 25/45 (54%), Gaps = 1/45 (2%)
Frame = -3
Query: 75 IPMLTLIIGFD-PKSSTALSKCMITGAAGSTVYYNLRLRHPTLDM 118
IPM+ ++G PK+S A+ C+I TV + L H TLD+
Sbjct: 336 IPMVVFLVGSQYPKTSVAIR*CLIISGFRGTVSVMVPLSHSTLDL 202
>TC89959 similar to GP|15795137|dbj|BAB02515. transporter-like protein
{Arabidopsis thaliana}, partial (87%)
Length = 1681
Score = 25.0 bits (53), Expect(2) = 1.7
Identities = 17/39 (43%), Positives = 22/39 (55%)
Frame = +3
Query: 317 LGLGGGFILGPLFLELGIPPQVASATSTFAMVFSSSMSV 355
LGLGGG +L FLE +P A T+ +VFS +V
Sbjct: 495 LGLGGGPVLSSWFLEF-VP---APNRGTWMVVFSGFWTV 599
Score = 23.5 bits (49), Expect(2) = 1.7
Identities = 7/13 (53%), Positives = 9/13 (68%)
Frame = +2
Query: 294 TWKFHKICLYCFC 306
TWK +I YC+C
Sbjct: 380 TWKEKRISYYCYC 418
>BF646944 similar to GP|12597808|gb| hypothetical protein {Arabidopsis
thaliana}, partial (14%)
Length = 340
Score = 29.6 bits (65), Expect = 2.5
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = -2
Query: 145 VMFADWMVTILLIILFIGTSTKALVKGIDTWK 176
++F W+V ++ I++FI TS +LV TW+
Sbjct: 156 IVFERWVVVVVGIVVFIDTS*CSLVTPFQTWE 61
>TC78466
Length = 620
Score = 29.6 bits (65), Expect = 2.5
Identities = 11/23 (47%), Positives = 18/23 (77%)
Frame = +1
Query: 142 AFNVMFADWMVTILLIILFIGTS 164
AFN+ +W+V LL+ILF+G++
Sbjct: 427 AFNLTSNEWVVVFLLLILFVGST 495
>TC87480 similar to GP|6277254|dbj|BAA86284.1 geranylgeranyl pyrophosphate
synthase {Croton sublyratus}, partial (79%)
Length = 1583
Score = 29.3 bits (64), Expect = 3.2
Identities = 13/30 (43%), Positives = 18/30 (59%)
Frame = -1
Query: 409 FVSAISLGGVGIGNMVEKMENEEYMGFDNL 438
F S+ S+G + N + ENEE +GFD L
Sbjct: 512 FCSSASIGSCFVSNEETEKENEEELGFDGL 423
>TC85524 similar to SP|P93508|CRTC_RICCO Calreticulin precursor. [Castor bean]
{Ricinus communis}, partial (93%)
Length = 1699
Score = 28.9 bits (63), Expect = 4.2
Identities = 18/52 (34%), Positives = 23/52 (43%), Gaps = 7/52 (13%)
Frame = +1
Query: 173 DTWKKETIMKKEAFEEAAQMLESGSTPD-------YASEEDYKSLPADLQDE 217
+TW K+ +K AFEEA + E T D EED + D DE
Sbjct: 1129 ETWGKQKDAEKAAFEEAEKKKEEEETKDDPVDSDAEEDEEDANEVSHDSDDE 1284
>TC87250 similar to GP|10140799|gb|AAG13629.1 putative steroid membrane
binding protein {Oryza sativa}, partial (65%)
Length = 1017
Score = 28.9 bits (63), Expect = 4.2
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Frame = +2
Query: 170 KGIDTWKKETIMKKEAFEEAAQMLESGSTPDYAS----EEDYKSLPADLQDEEVP 220
K ++ + K +KKEA E + SGSTP ED +S PA ++ EE P
Sbjct: 491 KFMEKYVKVGTIKKEATEAESTGEPSGSTPRDVDVINPTEDGRSKPAAVKSEETP 655
>TC82819 homologue to PIR|T06753|T06753 zinc finger protein F15B8.140 -
Arabidopsis thaliana, partial (50%)
Length = 1064
Score = 28.5 bits (62), Expect = 5.5
Identities = 20/69 (28%), Positives = 32/69 (45%), Gaps = 4/69 (5%)
Frame = -3
Query: 240 FLIVQILKTYSK---TCSIEYWLLNSLQVPIAISVT-LFEAICLCKGTRVIASRGKEITW 295
FL+ + +Y K T S WL + L + + + + +F+ C V+ASR ITW
Sbjct: 768 FLVSSPVTSYCKCFATLSTHKWLYSMLSLVMCLKCSKIFQWFCSWMINVVLASRCTTITW 589
Query: 296 KFHKICLYC 304
+ C C
Sbjct: 588 ES*HGCWLC 562
>TC88483 similar to GP|8843859|dbj|BAA97385.1 contains similarity to unknown
protein~dbj|BAA91854.1~gene_id:MWD22.17 {Arabidopsis
thaliana}, partial (46%)
Length = 1219
Score = 28.5 bits (62), Expect = 5.5
Identities = 25/111 (22%), Positives = 47/111 (41%), Gaps = 8/111 (7%)
Frame = +1
Query: 222 LDNIHWKELSVLMYVWVAFLIVQILKTYSKTCSIEYWLLNSLQVPIAISVTLFEAICLCK 281
L+ + W S+L++ ++ +I + +Y +CS +N + + + LF +
Sbjct: 322 LNPVLWHFPSILLFE*MSLIIRGLSVSYLNSCSFIVSRVNQFEGLMLFTEELFHKL---- 489
Query: 282 GTRVIASRGKEITWKFHK----ICLYCFCGIIAGMVSG----LLGLGGGFI 324
+ K +TW+ H +CLY CG +S L LG F+
Sbjct: 490 ---INPLFMKCLTWRKHSKQHFLCLYFTCGFTCAALSKREMMALNLGSTFM 633
>AW585086
Length = 536
Score = 28.1 bits (61), Expect = 7.2
Identities = 15/41 (36%), Positives = 21/41 (50%)
Frame = -3
Query: 281 KGTRVIASRGKEITWKFHKICLYCFCGIIAGMVSGLLGLGG 321
K V SRG EI W +CL F G ++ V ++ +GG
Sbjct: 516 KPRSVFVSRGFEIVWSQLDVCLPSFTGFVS-RVRTVVSIGG 397
>BQ751108
Length = 402
Score = 27.7 bits (60), Expect = 9.4
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = -1
Query: 26 SFFWYSGESSYERVWPEMKFGWR 48
++ +++GE+ R WPE + GWR
Sbjct: 369 AYCFHAGEAGQWRRWPEQRRGWR 301
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.326 0.142 0.431
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,764,305
Number of Sequences: 36976
Number of extensions: 214293
Number of successful extensions: 1769
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 1721
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1755
length of query: 447
length of database: 9,014,727
effective HSP length: 99
effective length of query: 348
effective length of database: 5,354,103
effective search space: 1863227844
effective search space used: 1863227844
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 60 (27.7 bits)
Medicago: description of AC147964.5