BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC147714.8 + phase: 0 /pseudo
(2334 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CB065285 weakly similar to PIR|A84500|A84 probable retroelement ... 346 5e-95
CB065382 similar to PIR|T09671|T096 RPE15 protein - alfalfa (fra... 299 7e-81
AL366605 285 1e-76
AL375831 228 3e-76
AW684517 similar to GP|9927273|dbj Similar to Arabidopsis thalia... 253 6e-67
AL367832 weakly similar to GP|14091845|gb Putative retroelement ... 211 2e-54
BE942785 150 4e-36
AL375832 117 4e-26
AJ497987 weakly similar to GP|9927273|dbj Similar to Arabidopsis... 103 6e-22
TC89839 homologue to SP|P23466|CYAA_SACKL Adenylate cyclase (EC ... 91 4e-18
BE124481 72 2e-12
TC92405 similar to GP|11994325|dbj|BAB02284. gene_id:MLM24.13~un... 39 0.031
TC83704 similar to PIR|T05005|T05005 hypothetical protein T19P19... 36 0.20
BQ144407 weakly similar to GP|6523547|emb| hydroxyproline-rich g... 35 0.34
BQ144193 weakly similar to GP|14026007|dbj putative transporter ... 35 0.34
BG648523 similar to GP|9955540|emb| putative protein {Arabidopsi... 34 0.58
TC77172 similar to GP|20466472|gb|AAM20553.1 putative protein {A... 34 0.76
TC91935 33 0.99
TC80931 similar to GP|14190783|gb|AAF65166.2 putative phloem tra... 33 0.99
TC80046 similar to SP|P22699|GUN6_DICDI Endoglucanase precursor ... 33 0.99
>CB065285 weakly similar to PIR|A84500|A84 probable retroelement gag/pol
polyprotein [imported] - Arabidopsis thaliana, partial
(2%)
Length = 592
Score = 346 bits (888), Expect = 5e-95
Identities = 172/196 (87%), Positives = 176/196 (89%)
Frame = -1
Query: 1734 EIKRLRRTVD**RSRSQ*QVGFSL*WCCQCLW*RNWGSHCIPAGASHSFYRPDPVRMYKQ 1793
+IKRLRRTVD *RSRSQ*Q+GFSL*WCCQCLW*RNW SHCIPAGA H FYRPD VRMYKQ
Sbjct: 592 KIKRLRRTVDW*RSRSQ*QMGFSL*WCCQCLW*RNWSSHCIPAGALHPFYRPDSVRMYKQ 413
Query: 1794 YG*V*SMYLWDRGSN*HENQTPRHLWRFCARHQSDKG*MGDPPC*VDSLS*LCETTADIF 1853
YG*V*SMYLWDRGSN*HENQTPRHLWRFC HQ D+G*MGDPPC DSL LCE AD+F
Sbjct: 412 YG*V*SMYLWDRGSN*HENQTPRHLWRFCTCHQPDQG*MGDPPCQSDSLPRLCEAFADLF 233
Query: 1854 YKG*AAPYSS**EPNG*CSCYSILHVSSKPLE*CANNQSATP*KTFTCVCYWGCDRSGW* 1913
YK *AAPYSS* EPNG*CS YSILHVSSKPLE*CANNQSATP*KTFTCVCYW CDRS *
Sbjct: 232 YKS*AAPYSS*REPNG*CSGYSILHVSSKPLE*CANNQSATP*KTFTCVCYWECDRSDR* 53
Query: 1914 KCG*L*TLVLRHQTVL 1929
KCG*L*TLVLRHQTVL
Sbjct: 52 KCG*L*TLVLRHQTVL 5
>CB065382 similar to PIR|T09671|T096 RPE15 protein - alfalfa (fragment),
partial (9%)
Length = 624
Score = 299 bits (766), Expect = 7e-81
Identities = 148/189 (78%), Positives = 156/189 (82%)
Frame = -2
Query: 417 QPQVPVYAIAQQMKQQLPVQQQQQNQQARPTFPPIPMLYAELLPTLLHRGHCTTRQGKPA 476
+P +P PV QQ+Q QQARPTFP IPMLYAE LPTLL RGHCT RQGKP
Sbjct: 569 RPMIP*LLC*PPRNNHPPVHQQRQ*QQARPTFPLIPMLYAE*LPTLLLRGHCTIRQGKPP 390
Query: 477 PDPLPPRFRSDLKCDFHQGALGHDVEGCYALKYIVKKLIDQGKLTFENNVPHVLDNPLPN 536
PDPLPPRFRSDLKCDFHQGALGHDVEGCYALK+IVKKLI+QGKLTFENNVPHVLDNPLPN
Sbjct: 389 PDPLPPRFRSDLKCDFHQGALGHDVEGCYALKHIVKKLINQGKLTFENNVPHVLDNPLPN 210
Query: 537 HAAVNMIEVCEEAPRLDVRNVATPLVPLHIKLHKASLFSHDHAKCLGCLRNPLGCYTVQD 596
HAAVNMIEV EEAP LDVRNV TPLVPLHIKL +ASLF HDHA C NPLGC VQ+
Sbjct: 209 HAAVNMIEVYEEAPGLDVRNVTTPLVPLHIKLCQASLFDHDHANCQE*FYNPLGCCVVQN 30
Query: 597 DIQSLMNDN 605
DIQSLMN+N
Sbjct: 29 DIQSLMNNN 3
Score = 63.5 bits (153), Expect = 9e-10
Identities = 32/40 (80%), Positives = 35/40 (87%)
Frame = -1
Query: 1 NAQLRTELATLREELAKANDVMTALLAAQEQSATAIPIAT 40
NAQLRTELA++REELAKAND MTALLAAQEQS+T P T
Sbjct: 618 NAQLRTELASMREELAKANDTMTALLAAQEQSSTGSPTTT 499
>AL366605
Length = 422
Score = 285 bits (730), Expect = 1e-76
Identities = 136/140 (97%), Positives = 138/140 (98%)
Frame = -3
Query: 148 HEIKANQGNADSFKTQDLCLVSKVDVPKKFKIPDFDRYNGLTCPQNHIIKYVRKMGNYKD 207
HEIKAN+GNADSFKTQDLCLVSKVDVPKKFKIPDFDRYNGLTCPQNHIIKYVRKMGNYKD
Sbjct: 420 HEIKANRGNADSFKTQDLCLVSKVDVPKKFKIPDFDRYNGLTCPQNHIIKYVRKMGNYKD 241
Query: 208 NDSLMIHCFQDSLMEDAAEWYTSLSKNDIHTFDELAAAFKSHYGFNIRLKPNREFLRSLS 267
NDSLMIHCFQDSLMEDAAEWYTSLSKNDIHTFDELAAAFKSHYGFN RLKPNREFLRSLS
Sbjct: 240 NDSLMIHCFQDSLMEDAAEWYTSLSKNDIHTFDELAAAFKSHYGFNTRLKPNREFLRSLS 61
Query: 268 *KKEESFREYAQRWKGAAAR 287
KKEESFREYAQRW+GAAAR
Sbjct: 60 QKKEESFREYAQRWRGAAAR 1
>AL375831
Length = 467
Score = 228 bits (582), Expect(2) = 3e-76
Identities = 111/121 (91%), Positives = 115/121 (94%)
Frame = +2
Query: 87 VLIPATNVVSINATLPQTTAAVTEPLVHTMPQSVNINTQHGSIPVTKTMEEMMEELAKEL 146
VLIPATN SI ATLPQTTAAVTEPLVHT+PQ +NINTQH SIPVTKTMEEMMEELAKEL
Sbjct: 2 VLIPATNAASIIATLPQTTAAVTEPLVHTLPQGININTQHRSIPVTKTMEEMMEELAKEL 181
Query: 147 RHEIKANQGNADSFKTQDLCLVSKVDVPKKFKIPDFDRYNGLTCPQNHIIKYVRKMGNYK 206
RHEI+AN+GNADS KTQDLCLVSKVDVPKKFKIPDFDRYNGLTCPQNHIIKYVRKMGNYK
Sbjct: 182 RHEIQANRGNADSVKTQDLCLVSKVDVPKKFKIPDFDRYNGLTCPQNHIIKYVRKMGNYK 361
Query: 207 D 207
D
Sbjct: 362 D 364
Score = 77.8 bits (190), Expect(2) = 3e-76
Identities = 35/36 (97%), Positives = 35/36 (97%)
Frame = +3
Query: 206 KDNDSLMIHCFQDSLMEDAAEWYTSLSKNDIHTFDE 241
K NDSLMIHCFQDSLMEDAAEWYTSLSKNDIHTFDE
Sbjct: 360 KTNDSLMIHCFQDSLMEDAAEWYTSLSKNDIHTFDE 467
>AW684517 similar to GP|9927273|dbj Similar to Arabidopsis thaliana chromosome
II BAC F26H6; putative retroelement pol polyprotein,
partial (1%)
Length = 488
Score = 253 bits (646), Expect = 6e-67
Identities = 131/187 (70%), Positives = 143/187 (76%)
Frame = +1
Query: 899 ITFQVMDINASYSCLLGRPWIHDAGAVTSTLHQKLKFAKSGKLVTIHGEEAYLVSQLSSF 958
ITFQVMDINASYSCLLGRPWIHDAGAVTSTLHQKLKF K+G
Sbjct: 1 ITFQVMDINASYSCLLGRPWIHDAGAVTSTLHQKLKFVKNG------------------- 123
Query: 959 SCIEAGSAEGTAFQGLTVEGTEPKRVGTAMASLKDA*RAVQEGQAAGWGRLIQLRENKHK 1018
SAEGTAFQGL++EG EPK+VG AMASLKDA +AVQEGQAA WG+LIQL ENK K
Sbjct: 124 ------SAEGTAFQGLSMEGAEPKKVGAAMASLKDAQKAVQEGQAADWGKLIQLCENKRK 285
Query: 1019 EGLGFSPTSGVSTGAFYSAGFVNAITEEATGFGPRPVFVTPGGIARDWDAIDIPSIMHVS 1078
EGL FSPTSGVSTG F+SAGFVN + EE F PRP+FV PGGIA+DWDA+D+PSIMHVS
Sbjct: 286 EGLRFSPTSGVSTGTFHSAGFVNTLAEEVARFVPRPLFVIPGGIAKDWDAVDVPSIMHVS 465
Query: 1079 E*YTLLL 1085
* LLL
Sbjct: 466 X*CVLLL 486
>AL367832 weakly similar to GP|14091845|gb Putative retroelement {Oryza
sativa}, partial (2%)
Length = 384
Score = 211 bits (538), Expect = 2e-54
Identities = 106/127 (83%), Positives = 112/127 (87%)
Frame = -3
Query: 1217 RKESHSASPGRD*AYQHRYRGEQARNQDRCYSRGRG*KEDHPTPPGISGYFCMVV*RYAR 1276
RKESHSASPGRD*AYQ RYRGEQAR+Q RC SRGRG*KED P PP I GYFCM+V*RYAR
Sbjct: 382 RKESHSASPGRD*AYQPRYRGEQARDQGRCCSRGRG*KEDLPAPPRIPGYFCMLV*RYAR 203
Query: 1277 SRSYDCRASDPHQA*MSSRQAEIEKDSSRYGSQD*E*GSKTD*CGFPHDSLVP*VGCQYC 1336
SRS +C SDP++A*MSSRQ EIEKDSSRYGSQD*E*GSK D*CGF HDS V *+GCQYC
Sbjct: 202 SRS*NCGTSDPNKA*MSSRQVEIEKDSSRYGSQD*E*GSKAD*CGFSHDS*VS*MGCQYC 23
Query: 1337 TCAKEGW 1343
TCAKEGW
Sbjct: 22 TCAKEGW 2
>BE942785
Length = 460
Score = 150 bits (380), Expect = 4e-36
Identities = 76/82 (92%), Positives = 78/82 (94%)
Frame = -2
Query: 938 SGKLVTIHGEEAYLVSQLSSFSCIEAGSAEGTAFQGLTVEGTEPKRVGTAMASLKDA*RA 997
SG LVTIHGEEAYL+SQLSSFSCIEAGSAEGTAFQGLTVEGTEPKR GTAMASLKDA RA
Sbjct: 378 SGXLVTIHGEEAYLISQLSSFSCIEAGSAEGTAFQGLTVEGTEPKRDGTAMASLKDAQRA 199
Query: 998 VQEGQAAGWGRLIQLRENKHKE 1019
VQE QAAGWGRLIQLRENKHK+
Sbjct: 198 VQESQAAGWGRLIQLRENKHKD 133
>AL375832
Length = 535
Score = 117 bits (294), Expect = 4e-26
Identities = 84/164 (51%), Positives = 92/164 (55%), Gaps = 8/164 (4%)
Frame = +3
Query: 1039 FVNAITEEATGFGPRPVFVTPGGIARDWDAIDIPSIMHVSE*YTLLLKYLVFFKITILSL 1098
FVNAI+EEATG G RP FVTPGGIA DWDAIDIPSIMHVSE* LLL VF L+L
Sbjct: 3 FVNAISEEATGSGLRPAFVTPGGIASDWDAIDIPSIMHVSE*CVLLL*RFVFKNNNPLAL 182
Query: 1099 CPKRE*YFL*GHVCFGIAVD**KKFCRFFHDCFLV-PFFLEIMVMPEKTKTSVFFLLISK 1157
PK F C K CRFFHDCF FFLE +K K F +
Sbjct: 183 -PKARVIFS-VRACLFRHCRLMNKNCRFFHDCFFFSAFFLEKW*CQKKPKRLYFLINFKN 356
Query: 1158 I-------CIKTLFLKSSNHFTQIEL**TRWAQ*PCIPSEF*VP 1194
+ K LFLKSSNH+ Q+E **TR Q* S+ * P
Sbjct: 357 LHEKKKIQKTKKLFLKSSNHYMQVEP**TR*TQ*FYASSKL*FP 488
>AJ497987 weakly similar to GP|9927273|dbj Similar to Arabidopsis thaliana
chromosome II BAC F26H6; putative retroelement pol
polyprotein, partial (1%)
Length = 636
Score = 103 bits (258), Expect = 6e-22
Identities = 72/164 (43%), Positives = 101/164 (60%)
Frame = -1
Query: 1638 EDLLCSGLGR*TPASLFGESYDLVDIQNGSDKVYL*ESRCYWEDCTLADAFV*I*YCVQN 1697
ED+LCS LG P SL+ S+ L I NGS++V++*E+R +DCT+ADA + I*Y V
Sbjct: 636 EDMLCSSLGCQAPPSLYD*SHYLAGI*NGSNQVHI*EARFDRKDCTVADATIGI*YRVPF 457
Query: 1698 SKGNQR*HSCRSSCLPTS**LSTN*VRFPR*RDHVFEIKRLRRTVD**RSRSQ*QVGFSL 1757
+GN R +SC S PT+* LST V *RD+V + +RL R RS S+ VGF +
Sbjct: 456 PEGN*RQYSC*SLGSPTT*RLSTYQV*LS**RDYVSKDERL*RATIRRRS*SRFSVGFDI 277
Query: 1758 *WCCQCLW*RNWGSHCIPAGASHSFYRPDPVRMYKQYG*V*SMY 1801
*W CQC+ R+ GS SH F+ PV +++Q+ *+ S++
Sbjct: 276 *WGCQCIRQRHRGSTPYS*RCSHPFHSKTPV*LHEQHR*IRSLH 145
>TC89839 homologue to SP|P23466|CYAA_SACKL Adenylate cyclase (EC 4.6.1.1)
(ATP pyrophosphate-lyase) (Adenylyl cyclase). [Yeast],
partial (0%)
Length = 665
Score = 91.3 bits (225), Expect = 4e-18
Identities = 56/137 (40%), Positives = 69/137 (49%), Gaps = 11/137 (8%)
Frame = +3
Query: 405 PPFYHQYPLPPGQPQVPVYAIAQQMKQQLPVQQQQQNQQARPTFP-----------PIPM 453
PP Q P P QP P Q+ +QQ P Q QNQ + P PIP+
Sbjct: 228 PPLVQQRPQSPYQPMCP-----QKPRQQAPRQSIPQNQVPQKFIPQNQVQKASQCDPIPV 392
Query: 454 LYAELLPTLLHRGHCTTRQGKPAPDPLPPRFRSDLKCDFHQGALGHDVEGCYALKYIVKK 513
YA+LLP LL + T P+ LPP +R DL C FHQGA GHD E CY LK V+K
Sbjct: 393 KYADLLPILLKKNLIQTLPLPRVPNSLPPWYRPDLNCVFHQGAPGHDTEQCYPLKEEVQK 572
Query: 514 LIDQGKLTFENNVPHVL 530
LI+ +F++ VL
Sbjct: 573 LIENNVWSFDDQDIKVL 623
>BE124481
Length = 538
Score = 72.4 bits (176), Expect = 2e-12
Identities = 44/107 (41%), Positives = 52/107 (48%), Gaps = 11/107 (10%)
Frame = +3
Query: 405 PPFYHQYPLPPGQPQVPVYAIAQQMKQQLPVQQQQQNQQARPTFP-----------PIPM 453
PP Q P P QP P Q+ +QQ P Q QNQ + P PIP+
Sbjct: 231 PPLVQQRPQSPYQPMCP-----QKPRQQAPRQSIPQNQVPQKFIPQNQVQKASQCDPIPV 395
Query: 454 LYAELLPTLLHRGHCTTRQGKPAPDPLPPRFRSDLKCDFHQGALGHD 500
YA+LLP LL + T P+ LPP +R DL C FHQGA GHD
Sbjct: 396 KYADLLPILLKKNLIQTLPLPRVPNSLPPWYRPDLNCVFHQGAPGHD 536
>TC92405 similar to GP|11994325|dbj|BAB02284. gene_id:MLM24.13~unknown
protein {Arabidopsis thaliana}, partial (69%)
Length = 864
Score = 38.5 bits (88), Expect = 0.031
Identities = 44/156 (28%), Positives = 64/156 (40%), Gaps = 7/156 (4%)
Frame = +2
Query: 796 SIVGNITACSNLWFSEDELP------EAGKHHNLALHISVNCKSDMISNVLVDTGSSLNV 849
SI G+I SN + S L +G + LA K+D + L D G +++
Sbjct: 152 SISGSIPIPSNPFDSTSPLKFNLLSAVSGLNRGLAASEEDLQKADAAAKELEDAGGLVDL 331
Query: 850 MPKSTLDQLSYRGTPLRRSTFLVKAFNGTRKSV-LGEIDLPITIGPETFLITFQVMDINA 908
LD+L R + S F + G+R +G + LPIT+G I D +
Sbjct: 332 T--DNLDRLQGRWKLIYSSAFSSRTLGGSRPGPPIGRL-LPITLGQVFQRIDILSKDFDN 502
Query: 909 SYSCLLGRPWIHDAGAVTSTLHQKLKFAKSGKLVTI 944
LG PW VT+TL K + S K+ I
Sbjct: 503 IVDLQLGAPWPLPPLEVTATLAHKFELVGSSKIKII 610
>TC83704 similar to PIR|T05005|T05005 hypothetical protein T19P19.70 -
Arabidopsis thaliana, partial (15%)
Length = 716
Score = 35.8 bits (81), Expect = 0.20
Identities = 31/111 (27%), Positives = 45/111 (39%), Gaps = 6/111 (5%)
Frame = +1
Query: 379 ATVAPINAAQMPPSYPYVSYSQHPFFPPFYHQYPLPPGQPQVPVYAIAQQMKQQLPVQQQ 438
+TV P+ +P PY QH PP P PP ++P A +Q+ P+ +
Sbjct: 262 STVPPVATTSLPEPLPY----QHKEQPPIPVTLPPPPPLSKLPP-ATREQLPPPPPLSKL 426
Query: 439 QQNQQARPTFPP----IPMLYAELLPTL--LHRGHCTTRQGKPAPDPLPPR 483
+ P PP +P E LP L + R+ P P PLP +
Sbjct: 427 PPAAREHPPPPPPSAKLPPAARERLPLPPPLSKLPPAARERLPPPSPLPEK 579
>BQ144407 weakly similar to GP|6523547|emb| hydroxyproline-rich glycoprotein
DZ-HRGP {Volvox carteri f. nagariensis}, partial (23%)
Length = 1217
Score = 35.0 bits (79), Expect = 0.34
Identities = 29/105 (27%), Positives = 44/105 (41%), Gaps = 5/105 (4%)
Frame = -2
Query: 383 PINAAQMPPSYPYVSYSQHPFFPP---FYHQYPLPPGQPQV-PVYAIAQQMKQQLPVQQQ 438
PI+ + +P YP ++ +P FPP +PL P P ++ +LP+
Sbjct: 601 PIHPSVLPHPYPRLTTPSYPPFPPPLVVLSPFPLTPSPTLASPFQHPPPHLQFRLPILFT 422
Query: 439 QQNQQARPTFPPIPMLYAELLPTLLHRGHCTTRQ-GKPAPDPLPP 482
+ + PT PP P ++ L P C AP PLPP
Sbjct: 421 R*TALSSPTPPPRPAAHSLLPPPF----RCPPASCPLSAPPPLPP 299
>BQ144193 weakly similar to GP|14026007|dbj putative transporter
{Mesorhizobium loti}, partial (4%)
Length = 1037
Score = 35.0 bits (79), Expect = 0.34
Identities = 22/67 (32%), Positives = 29/67 (42%), Gaps = 1/67 (1%)
Frame = +2
Query: 352 SKRYGNGHHKK-KETEVGMVSAGAGQSMATVAPINAAQMPPSYPYVSYSQHPFFPPFYHQ 410
+K+ NG K ET G + +S + +MPP YP S HP PP H
Sbjct: 47 TKKRANGKQAKINETNAGKLKV---KSNTPAYLVGYKEMPPVYPRKSPKTHPRPPPNSHN 217
Query: 411 YPLPPGQ 417
P PP +
Sbjct: 218 RPEPPAK 238
>BG648523 similar to GP|9955540|emb| putative protein {Arabidopsis thaliana},
partial (9%)
Length = 770
Score = 34.3 bits (77), Expect = 0.58
Identities = 34/113 (30%), Positives = 43/113 (37%), Gaps = 3/113 (2%)
Frame = +3
Query: 373 GAGQSMATVAP-INAAQMPPSYPYVSYSQHPFFPPFYHQYPLPPGQPQVPVYAIAQQMKQ 431
G G +M P + +Q P+ P PP H L P Q Q QQ Q
Sbjct: 318 GVGVAMPLSIPSFDGSQGEQKQPHPGSIGAPPLPPGPHPSLLNPNQQQP-----FQQNPQ 482
Query: 432 QLPVQQQQQNQQARPTFPPIPMLYAELLPTLLHRGHCT--TRQGKPAPDPLPP 482
Q+P QQQ Q P+PM +P + H H + Q P P P P
Sbjct: 483 QIPQHQQQLQQH----MGPLPM--PPNMPQIQHSSHSSMLPHQHLPRPPPQMP 623
>TC77172 similar to GP|20466472|gb|AAM20553.1 putative protein {Arabidopsis
thaliana}, partial (78%)
Length = 4130
Score = 33.9 bits (76), Expect = 0.76
Identities = 23/75 (30%), Positives = 27/75 (35%)
Frame = +1
Query: 410 QYPLPPGQPQVPVYAIAQQMKQQLPVQQQQQNQQARPTFPPIPMLYAELLPTLLHRGHCT 469
Q P+ +PQ P + QQ + Q N PTFPP Y P H GH
Sbjct: 2776 QPPVRVFEPQTPALIRNPEQYQQPTLGSQLYNTNNNPTFPPTNQPYQPTPPAPSHIGHGP 2955
Query: 470 TRQGKPAPDPLPPRF 484
AP P F
Sbjct: 2956 NLPHVAAPTSNPIGF 3000
>TC91935
Length = 1144
Score = 33.5 bits (75), Expect = 0.99
Identities = 17/61 (27%), Positives = 31/61 (49%), Gaps = 8/61 (13%)
Frame = +2
Query: 168 VSKVDVPKKFKIPDFDRYNGLTCP--------QNHIIKYVRKMGNYKDNDSLMIHCFQDS 219
VS+V + ++ +P+F R LTCP N++I Y+ ++ N ++ C QD
Sbjct: 521 VSRVIIQSRYNVPNFSRSTALTCPTFDQEASLPNNLIAYLSRLANM----MIIFSCKQDH 688
Query: 220 L 220
+
Sbjct: 689 I 691
>TC80931 similar to GP|14190783|gb|AAF65166.2 putative phloem transcription
factor M1 {Apium graveolens}, partial (67%)
Length = 1193
Score = 33.5 bits (75), Expect = 0.99
Identities = 25/84 (29%), Positives = 37/84 (43%)
Frame = +1
Query: 26 LAAQEQSATAIPIATAIPVTTSVLPTASTDARFAMPAGFPYGLPPFFTPSTAAGTSGTAN 85
+ +Q+Q + I A TT+ TA+T++ A FP TP+TAA T T+
Sbjct: 535 MQSQQQHLSTIAATDATTTTTATASTAATES-----AAFPDSTADSTTPATAAATPSTST 699
Query: 86 NVLIPATNVVSINATLPQTTAAVT 109
A + + AT TA T
Sbjct: 700 ---AAAFSAAATAATASAVTATAT 762
>TC80046 similar to SP|P22699|GUN6_DICDI Endoglucanase precursor (EC
3.2.1.4) (Endo-1 4-beta-glucanase) (Spore germination
protein 270-6), partial (11%)
Length = 643
Score = 33.5 bits (75), Expect = 0.99
Identities = 32/114 (28%), Positives = 42/114 (36%), Gaps = 4/114 (3%)
Frame = +1
Query: 376 QSMATVAPINAAQMPPSYPYVSYSQHPFFPPFYHQYPLPPGQ-PQVPVYAIAQQMKQQLP 434
Q+ + P Q PP P Q P P PP + PQ P + Q+ Q+LP
Sbjct: 253 QTRSLPLPQRPPQRPPQRPPQKPPQRPPQKPPQRPPQRPPQKLPQRPPQKLPQRPPQKLP 432
Query: 435 VQQQQQNQQA---RPTFPPIPMLYAELLPTLLHRGHCTTRQGKPAPDPLPPRFR 485
+ Q+ Q P PP+ L P L H +P P P P R
Sbjct: 433 QKLPQKPPQRPLPHPQKPPLRPLPHPQKPPLRPLPHPQKPPLRPLPHPQKPPLR 594
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.345 0.151 0.521
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,942,121
Number of Sequences: 36976
Number of extensions: 1192473
Number of successful extensions: 12180
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 5014
Number of HSP's successfully gapped in prelim test: 630
Number of HSP's that attempted gapping in prelim test: 6378
Number of HSP's gapped (non-prelim): 6847
length of query: 2334
length of database: 9,014,727
effective HSP length: 112
effective length of query: 2222
effective length of database: 4,873,415
effective search space: 10828728130
effective search space used: 10828728130
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 15 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 38 (21.6 bits)
S2: 66 (30.0 bits)
Medicago: description of AC147714.8