TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC147496.7 + phase: 0 
         (110 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC81786 similar to PIR|B86416|B86416 unknown protein  16040-1118...    70  1e-13
TC81822 weakly similar to GP|17380854|gb|AAL36239.1 unknown prot...    64  1e-11
AW689137 similar to GP|17380854|gb| unknown protein {Arabidopsis...    51  6e-08
BQ140130 similar to GP|18390108|gb gb protein {Sorghum bicolor},...    35  0.004
BI268698                                                               28  0.54
TC86963 similar to GP|15148918|gb|AAK84886.1 homeodomain leucine...    27  0.92
AW683707 similar to GP|1814424|gb|A homeodomain protein AHDP {Ar...    27  1.6
TC88015 similar to GP|13926206|gb|AAK49581.1 Unknown protein {Ar...    27  1.6
TC86277 similar to GP|17933281|gb|AAL48224.1 At2g17710/T17A5.17 ...    26  2.0
AW736138 similar to PIR|E84800|E848 hypothetical protein At2g380...    26  2.7
TC77092 squalene monooxygenase 2 [Medicago truncatula]                 25  3.5
BG647894 similar to GP|17381274|gb AT5g11700/T22P22_90 {Arabidop...    25  4.6
BQ151168                                                               25  4.6
TC79500 similar to GP|9294059|dbj|BAB02016.1 MAP kinase {Arabido...    25  4.6
BI310700 weakly similar to GP|21592712|gb| cystatin-like protein...    25  6.0
TC79032 weakly similar to GP|11340591|emb|CAC17051. unnamed prot...    25  6.0
TC87034 homologue to SP|P13983|EXTN_TOBAC Extensin precursor (Ce...    25  6.0
TC84613 similar to GP|10176939|dbj|BAB10088. DNAJ-like protein {...    24  7.8
BF646611 weakly similar to GP|9294562|dbj contains similarity to...    24  7.8
TC82955 GP|7300270|gb|AAF55432.1| CG5829 gene product {Drosophil...    24  7.8

>TC81786 similar to PIR|B86416|B86416 unknown protein  16040-11188
           [imported] - Arabidopsis thaliana, partial (6%)
          Length = 534

 Score = 70.1 bits (170), Expect = 1e-13
 Identities = 39/83 (46%), Positives = 53/83 (62%), Gaps = 5/83 (6%)
 Frame = +3

Query: 4   ESVVNRNSGGGGGVKAVKE----VVTTAKNVVAAVKEIV-NCTEQEIYDVLRECDMDPNL 58
           E +  R SG  GG K        +   ++ +V ++KEIV N  + EIY  L++C+MDPN 
Sbjct: 120 EGIGVRMSGKVGGQKGTSSSLSGIPAASRKMVQSLKEIVSNIPDNEIYATLKDCNMDPNE 299

Query: 59  AVEKLLSQDTFREVRSKREKRKE 81
           AV +LLSQD F EV+SKREK+KE
Sbjct: 300 AVSRLLSQDPFHEVKSKREKKKE 368


>TC81822 weakly similar to GP|17380854|gb|AAL36239.1 unknown protein
           {Arabidopsis thaliana}, partial (7%)
          Length = 767

 Score = 63.5 bits (153), Expect = 1e-11
 Identities = 30/71 (42%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
 Frame = +1

Query: 14  GGGVKAVKEVVTTAKNVVAAVKEIV-NCTEQEIYDVLRECDMDPNLAVEKLLSQDTFREV 72
           G G KA   +  + K  +  +KEI  N ++++IY +L+EC MDPN   +KLL QDTF EV
Sbjct: 262 GSGFKA--SIPNSVKKTIQNIKEITGNHSDEDIYAMLKECSMDPNETTQKLLLQDTFHEV 435

Query: 73  RSKREKRKEVI 83
           + K++++KE++
Sbjct: 436 KRKKDRKKEIL 468


>AW689137 similar to GP|17380854|gb| unknown protein {Arabidopsis
          thaliana}, partial (8%)
          Length = 452

 Score = 51.2 bits (121), Expect = 6e-08
 Identities = 23/41 (56%), Positives = 31/41 (75%)
 Frame = +3

Query: 41 TEQEIYDVLRECDMDPNLAVEKLLSQDTFREVRSKREKRKE 81
          T+ EI+ VL+E +MDPN   +KLL  DTF EV S+R++RKE
Sbjct: 24 TDDEIFSVLKESNMDPNETTQKLLYLDTFHEVXSRRDRRKE 146


>BQ140130 similar to GP|18390108|gb gb protein {Sorghum bicolor}, partial
           (3%)
          Length = 346

 Score = 35.0 bits (79), Expect = 0.004
 Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
 Frame = +3

Query: 8   NRNSGGGGGVKAVKEVVTTAKNVVAAVKEIV-NCTEQEIYDVLRECDMDPNLAVEKL 63
           +R  G GG       +    +  + ++KEIV N +E +IY  L+E +MDPN   +KL
Sbjct: 177 SRTEGAGG--TGTHLLSAKVRKTIQSIKEIVGNHSEADIYVALKETNMDPNETTQKL 341


>BI268698 
          Length = 136

 Score = 28.1 bits (61), Expect = 0.54
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +1

Query: 78  KRKEVILLRYVNIDMRLNLSLMMNNVCMYF 107
           K  EV+ +R VN+  R+ L +M + VC+ F
Sbjct: 25  KHLEVVYVRMVNVCFRITLQIMNSYVCL*F 114


>TC86963 similar to GP|15148918|gb|AAK84886.1 homeodomain leucine zipper
           protein HDZ2 {Phaseolus vulgaris}, partial (87%)
          Length = 1519

 Score = 27.3 bits (59), Expect = 0.92
 Identities = 22/92 (23%), Positives = 41/92 (43%)
 Frame = +1

Query: 2   GSESVVNRNSGGGGGVKAVKEVVTTAKNVVAAVKEIVNCTEQEIYDVLRECDMDPNLAVE 61
           GS SVVN  +GGG         V T +     +++  NC +++      +      L+ E
Sbjct: 595 GSNSVVNFENGGG------SNRVVTDRPFFQQLEKEENCGDEDYEACYHQQGKKRRLSSE 756

Query: 62  KLLSQDTFREVRSKREKRKEVILLRYVNIDMR 93
           ++   +   EV +K E  ++V L + + +  R
Sbjct: 757 QVQFLEKSFEVENKLEPDRKVQLAKELGLQPR 852


>AW683707 similar to GP|1814424|gb|A homeodomain protein AHDP {Arabidopsis
           thaliana}, partial (3%)
          Length = 620

 Score = 26.6 bits (57), Expect = 1.6
 Identities = 10/17 (58%), Positives = 13/17 (75%)
 Frame = +3

Query: 7   VNRNSGGGGGVKAVKEV 23
           V  NSGGGGGV+ + E+
Sbjct: 324 VENNSGGGGGVRNIGEI 374


>TC88015 similar to GP|13926206|gb|AAK49581.1 Unknown protein {Arabidopsis
           thaliana}, partial (57%)
          Length = 741

 Score = 26.6 bits (57), Expect = 1.6
 Identities = 13/36 (36%), Positives = 24/36 (66%)
 Frame = +3

Query: 71  EVRSKREKRKEVILLRYVNIDMRLNLSLMMNNVCMY 106
           +V SK +  K ++LLR  N+D+   LSL++  +C++
Sbjct: 468 KVSSKVKVLKLLVLLRINNMDLVEILSLVVRKLCLF 575


>TC86277 similar to GP|17933281|gb|AAL48224.1 At2g17710/T17A5.17
           {Arabidopsis thaliana}, partial (52%)
          Length = 989

 Score = 26.2 bits (56), Expect = 2.0
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -1

Query: 1   MGSESVVNRNSGGGGGVKAVKEVV 24
           +G E + N  SGGGGG  A  E+V
Sbjct: 299 LGFEMIRNFGSGGGGGGVAALEIV 228


>AW736138 similar to PIR|E84800|E848 hypothetical protein At2g38070
           [imported] - Arabidopsis thaliana, partial (7%)
          Length = 604

 Score = 25.8 bits (55), Expect = 2.7
 Identities = 14/51 (27%), Positives = 26/51 (50%)
 Frame = +3

Query: 11  SGGGGGVKAVKEVVTTAKNVVAAVKEIVNCTEQEIYDVLRECDMDPNLAVE 61
           +G GGG+++++      +N+     E+    E  +    R CD DP L+V+
Sbjct: 435 TGNGGGLRSMEVEKQRRRNLRETQSEV---GEYGLSLCRRSCDTDPRLSVD 578


>TC77092 squalene monooxygenase 2 [Medicago truncatula]
          Length = 1910

 Score = 25.4 bits (54), Expect = 3.5
 Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = +2

Query: 85  LRYVNIDMRLNLSLMMNNVC-MYFDFR 110
           LRY +I  RL+  L   ++C + FDFR
Sbjct: 119 LRYGSIQYRLDFKLCFESICVIQFDFR 199


>BG647894 similar to GP|17381274|gb AT5g11700/T22P22_90 {Arabidopsis
           thaliana}, partial (43%)
          Length = 604

 Score = 25.0 bits (53), Expect = 4.6
 Identities = 12/27 (44%), Positives = 16/27 (58%)
 Frame = +1

Query: 2   GSESVVNRNSGGGGGVKAVKEVVTTAK 28
           G  +V N + GGGGG +   EVV T +
Sbjct: 283 GGTTVKNESYGGGGGGRIWFEVVDTVE 363


>BQ151168 
          Length = 1011

 Score = 25.0 bits (53), Expect = 4.6
 Identities = 11/29 (37%), Positives = 18/29 (61%)
 Frame = -3

Query: 9   RNSGGGGGVKAVKEVVTTAKNVVAAVKEI 37
           R  GGGGGV+    ++T A N +A ++ +
Sbjct: 874 RQLGGGGGVEQ*T*LITQAGNGMAVIEHV 788


>TC79500 similar to GP|9294059|dbj|BAB02016.1 MAP kinase {Arabidopsis
           thaliana}, partial (55%)
          Length = 1381

 Score = 25.0 bits (53), Expect = 4.6
 Identities = 13/44 (29%), Positives = 23/44 (51%)
 Frame = +3

Query: 63  LLSQDTFREVRSKREKRKEVILLRYVNIDMRLNLSLMMNNVCMY 106
           LLS +     RSK+   KEV++L  + + + L   L+   + M+
Sbjct: 405 LLSMERQVNTRSKKSLEKEVMVLSVLQLTLILAKKLLSRKLTMF 536


>BI310700 weakly similar to GP|21592712|gb| cystatin-like protein
           {Arabidopsis thaliana}, partial (26%)
          Length = 792

 Score = 24.6 bits (52), Expect = 6.0
 Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
 Frame = +2

Query: 10  NSGGGG-GVKAVKEVVTTAKNVVAAVKEIVN 39
           N+GGGG G+K V EVV   + VV+ +K  +N
Sbjct: 275 NNGGGGEGLKFV-EVVEAEQQVVSGMKYYLN 364


>TC79032 weakly similar to GP|11340591|emb|CAC17051. unnamed protein product
           {Zea mays}, partial (78%)
          Length = 956

 Score = 24.6 bits (52), Expect = 6.0
 Identities = 10/36 (27%), Positives = 23/36 (63%)
 Frame = -1

Query: 69  FREVRSKREKRKEVILLRYVNIDMRLNLSLMMNNVC 104
           FR++ + + ++   I L +V I++++ + L +N VC
Sbjct: 779 FRQMFTTKVRKIIAIALEFV*INLQVQVLLQLNTVC 672


>TC87034 homologue to SP|P13983|EXTN_TOBAC Extensin precursor (Cell wall
           hydroxyproline-rich glycoprotein). [Common tobacco],
           partial (2%)
          Length = 644

 Score = 24.6 bits (52), Expect = 6.0
 Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
 Frame = -2

Query: 10  NSGGGG-GVKAVKEVVTTAKNVVAAVKEIVN 39
           N+GGGG G+K V EVV   + VV+ +K  +N
Sbjct: 412 NNGGGGEGLKFV-EVVEAEQQVVSGMKYYLN 323


>TC84613 similar to GP|10176939|dbj|BAB10088. DNAJ-like protein {Arabidopsis
           thaliana}, partial (10%)
          Length = 628

 Score = 24.3 bits (51), Expect = 7.8
 Identities = 10/41 (24%), Positives = 22/41 (53%)
 Frame = +1

Query: 5   SVVNRNSGGGGGVKAVKEVVTTAKNVVAAVKEIVNCTEQEI 45
           S+VNR   GGGG+  +  +      ++  ++++    E++I
Sbjct: 118 SLVNRMCLGGGGIMFIGHMAVVEWVIIIIIRDLRFTVEEDI 240


>BF646611 weakly similar to GP|9294562|dbj contains similarity to CAF
           protein~gene_id:MQC12.21 {Arabidopsis thaliana}, partial
           (36%)
          Length = 637

 Score = 24.3 bits (51), Expect = 7.8
 Identities = 18/73 (24%), Positives = 38/73 (51%), Gaps = 4/73 (5%)
 Frame = +3

Query: 14  GGGVKAVKEVVTTAKNVVAAVKEIVNCTEQEIYDVLRECDMDPNLAVEKLLSQ----DTF 69
           GG VKA K +    +++ AAV   V+   ++++ +LR   ++P + ++ L  +     T 
Sbjct: 384 GGSVKAPKILADVVESIAAAVYVDVDFDLKKLWVILRGL-LEPIVTLDDLERKPQPVTTL 560

Query: 70  REVRSKREKRKEV 82
            E+  K  ++ E+
Sbjct: 561 YEICQKNGRKVEI 599


>TC82955 GP|7300270|gb|AAF55432.1| CG5829 gene product {Drosophila
           melanogaster}, partial (5%)
          Length = 446

 Score = 24.3 bits (51), Expect = 7.8
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +1

Query: 2   GSESVVNRNSGGGGGV 17
           G  S  N +SGGGGGV
Sbjct: 133 GGSSTSNGSSGGGGGV 180


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.319    0.135    0.369 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,559,907
Number of Sequences: 36976
Number of extensions: 24112
Number of successful extensions: 162
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 159
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 161
length of query: 110
length of database: 9,014,727
effective HSP length: 86
effective length of query: 24
effective length of database: 5,834,791
effective search space: 140034984
effective search space used: 140034984
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 50 (23.9 bits)