TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC147430.8 + phase: 1 /pseudo
         (437 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

AL370071 similar to GP|15795135|dbj transposase-like protein {Ar...   122  2e-28
CB892335 similar to GP|7715599|gb| F20B17.17 {Arabidopsis thalia...   114  7e-26
TC90728 similar to GP|7715599|gb|AAF68117.1| F20B17.17 {Arabidop...    77  1e-14
TC82359 weakly similar to GP|22655127|gb|AAM98154.1 putative pro...    62  4e-14
BG584059 similar to GP|12722947|gb| UNKNOWN PROTEIN {Lactococcus...    74  1e-13
TC87069 weakly similar to GP|9758877|dbj|BAB09431.1 contains sim...    31  0.82
TC87070 weakly similar to GP|9965105|gb|AAG09952.1| resistance p...    31  0.82
AJ503323 weakly similar to PIR|S51391|S513 probable membrane pro...    31  0.82
TC84080 similar to GP|15982773|gb|AAL09734.1 At1g36320/F7F23_4 {...    30  1.8
TC79739 homologue to PIR|G86423|G86423 probable hydrophilic prot...    28  5.3
TC78645 similar to GP|19310705|gb|AAL85083.1 unknown protein {Ar...    28  9.1
TC92748 similar to SP|P53393|SUT3_STYHA Low affinity sulphate tr...    28  9.1

>AL370071 similar to GP|15795135|dbj transposase-like protein {Arabidopsis
           thaliana}, partial (3%)
          Length = 370

 Score =  122 bits (307), Expect = 2e-28
 Identities = 56/102 (54%), Positives = 71/102 (68%)
 Frame = +3

Query: 334 IIDDRWDRMLHRPLHAAAYYLNPQLHYRPGFKADIEVRKGLMDCITRMVEDPEEQAKIEV 393
           IID+RWD+  H PLHAA Y+LN Q HY PGF+ D++V++GL  CITRMV D EE++KIE+
Sbjct: 63  IIDERWDKQFHSPLHAAGYFLNAQYHYSPGFRDDVKVKRGLQHCITRMVTDHEERSKIEI 242

Query: 394 QMHDFKKQIGYFGTKIAKLTLDKSTPADWWESVVFEYLELQR 435
           Q+ DF KQ   FG  IA +T D   P  WW S+V    ELQ+
Sbjct: 243 QLDDFDKQANQFGHPIAIITADMEIPPIWWGSLVDGPPELQK 368


>CB892335 similar to GP|7715599|gb| F20B17.17 {Arabidopsis thaliana}, partial
           (27%)
          Length = 788

 Score =  114 bits (285), Expect = 7e-26
 Identities = 56/163 (34%), Positives = 95/163 (57%)
 Frame = +2

Query: 21  IQRSKEFNIMCDMISRHGNGFKPPSYYDIRVKLLNQEVKSTNDALEEHKREWKKTSCTIM 80
           + RS  + +M D I++ G GF  PS   ++   L +         ++ ++EW  T CTI+
Sbjct: 299 VARSSSYQLMIDAITKCGPGFTGPSAEILKTIWLERIKSEVGLQSKDVEKEWATTGCTII 478

Query: 81  TDEWTDRRRRTILNFLVNSPRGTVFLKSVDASNICKTSEKIFEMIDAVVEEVGEDNVVQV 140
            D WTD + + I+NFLV+SP    F KSVDAS   K ++ + ++ D+V++E G +NVVQ+
Sbjct: 479 ADTWTDYKSKAIINFLVSSPSRIFFHKSVDASAYFKNTKWLADLFDSVIQEFGPENVVQI 658

Query: 141 VTDNAANYKAAGEMLMRKRKKLYWTPCAAHCLDLMLEDLEKKI 183
           + D++ NY   G  +++    ++ +PCA+  L+L+  D  K I
Sbjct: 659 IMDSSFNYTGIGNHIVQNYGTIFVSPCASQWLNLIFGDSPKMI 787


>TC90728 similar to GP|7715599|gb|AAF68117.1| F20B17.17 {Arabidopsis
           thaliana}, partial (58%)
          Length = 1171

 Score = 77.4 bits (189), Expect = 1e-14
 Identities = 56/211 (26%), Positives = 93/211 (43%), Gaps = 2/211 (0%)
 Frame = +3

Query: 229 TSYLTLGCLYENKEALIRMFTSKEWK-SGKCAKLRDGKALEDIILDKKFWKDIVICLKGA 287
           +++L+L  + + +  L  MF S E+      A      +   I  D  FW+ +  C+  +
Sbjct: 12  STFLSLQTMLKLRTRLKHMFHSPEYALDTSYANKPQSLSCIAIAEDGDFWRTVEECVAIS 191

Query: 288 TPLMKVLRLADLDKKTSHGIHL*SNGSSKGANSKEF*WCQK-EPVWNIIDDRWDRMLHRP 346
            P +KVLR     K T   I+     + +   +       K +   +I+D +W   LH P
Sbjct: 192 EPFLKVLREVSEGKPTVGSIYELMTRAKESIRTYYIMDENKCKTFLDIVDKKWRDQLHSP 371

Query: 347 LHAAAYYLNPQLHYRPGFKADIEVRKGLMDCITRMVEDPEEQAKIEVQMHDFKKQIGYFG 406
           LHAAA +LNP + Y P  K    +++     + +++  P+ +  I  Q++ F K  G FG
Sbjct: 372 LHAAAAFLNPSIQYNPEIKFLSSIKEDFYHVLEKLLPVPDMRRDITNQIYTFTKAHGMFG 551

Query: 407 TKIAKLTLDKSTPADWWESVVFEYLELQRFA 437
             + K   +   P  WWE        LQR A
Sbjct: 552 CSLTKEARNTVAPWLWWEQYGDSAPGLQRVA 644


>TC82359 weakly similar to GP|22655127|gb|AAM98154.1 putative protein
           {Arabidopsis thaliana}, partial (14%)
          Length = 907

 Score = 61.6 bits (148), Expect(2) = 4e-14
 Identities = 28/76 (36%), Positives = 42/76 (54%)
 Frame = +3

Query: 350 AAYYLNPQLHYRPGFKADIEVRKGLMDCITRMVEDPEEQAKIEVQMHDFKKQIGYFGTKI 409
           A +YLNP+  Y        E+R G++DCI R+V D   Q KI  +++ +K   G FG K+
Sbjct: 57  AGFYLNPKFFYSIQGDVPNEIRSGMLDCIERLVPDTRVQDKISKELNLYKSAAGDFGRKM 236

Query: 410 AKLTLDKSTPADWWES 425
           A    D   P++WW +
Sbjct: 237 AIRARDNLLPSEWWST 284



 Score = 33.9 bits (76), Expect(2) = 4e-14
 Identities = 12/18 (66%), Positives = 13/18 (71%)
 Frame = +2

Query: 332 WNIIDDRWDRMLHRPLHA 349
           WNII  RWD + H PLHA
Sbjct: 2   WNIIHQRWDSLWHHPLHA 55


>BG584059 similar to GP|12722947|gb| UNKNOWN PROTEIN {Lactococcus lactis
           subsp. lactis}, partial (9%)
          Length = 838

 Score = 73.6 bits (179), Expect = 1e-13
 Identities = 35/63 (55%), Positives = 46/63 (72%)
 Frame = -1

Query: 228 ATSYLTLGCLYENKEALIRMFTSKEWKSGKCAKLRDGKALEDIILDKKFWKDIVICLKGA 287
           AT+YLT  CL++N  ALI MFT KEWKSGK AK +DG  +E  + D  FWK+++IC++G 
Sbjct: 796 ATTYLT*ECLHDNYRALIIMFTLKEWKSGKLAKSKDGIIVEKAVKD-NFWKNVMICMRGV 620

Query: 288 TPL 290
            PL
Sbjct: 619 FPL 611


>TC87069 weakly similar to GP|9758877|dbj|BAB09431.1 contains similarity to
           disease resistance protein~gene_id:K24G6.11 {Arabidopsis
           thaliana}, partial (4%)
          Length = 1310

 Score = 31.2 bits (69), Expect = 0.82
 Identities = 16/39 (41%), Positives = 22/39 (56%)
 Frame = +3

Query: 37  HGNGFKPPSYYDIRVKLLNQEVKSTNDALEEHKREWKKT 75
           H N F  P +Y+I    + +E  S   ALE H+R+ KKT
Sbjct: 291 HNNQFIFPVFYNIEPCTVRKETGSYGMALENHERDNKKT 407


>TC87070 weakly similar to GP|9965105|gb|AAG09952.1| resistance protein LM17
           {Glycine max}, partial (4%)
          Length = 731

 Score = 31.2 bits (69), Expect = 0.82
 Identities = 16/39 (41%), Positives = 22/39 (56%)
 Frame = +1

Query: 37  HGNGFKPPSYYDIRVKLLNQEVKSTNDALEEHKREWKKT 75
           H N F  P +Y+I    + +E  S   ALE H+R+ KKT
Sbjct: 292 HNNQFIFPVFYNIEPCTVRKETGSYGMALENHERDNKKT 408


>AJ503323 weakly similar to PIR|S51391|S513 probable membrane protein YLR373c
           - yeast (Saccharomyces cerevisiae), partial (2%)
          Length = 512

 Score = 31.2 bits (69), Expect = 0.82
 Identities = 16/39 (41%), Positives = 22/39 (56%)
 Frame = +1

Query: 37  HGNGFKPPSYYDIRVKLLNQEVKSTNDALEEHKREWKKT 75
           H N F  P +Y+I    + +E  S   ALE H+R+ KKT
Sbjct: 298 HNNQFIFPVFYNIEPCTVRKETGSYGMALENHERDNKKT 414


>TC84080 similar to GP|15982773|gb|AAL09734.1 At1g36320/F7F23_4 {Arabidopsis
           thaliana}, partial (27%)
          Length = 594

 Score = 30.0 bits (66), Expect = 1.8
 Identities = 20/58 (34%), Positives = 25/58 (42%)
 Frame = +1

Query: 371 RKGLMDCITRMVEDPEEQAKIEVQMHDFKKQIGYFGTKIAKLTLDKSTPADWWESVVF 428
           R+G   C    V   E+ A  +V   D  K IG     I    +DKSTP DW   + F
Sbjct: 190 RRGFRPC--NYVASNEDNASSDVV--DESKMIGVCDKLIGVFMVDKSTPTDWRRLLAF 351


>TC79739 homologue to PIR|G86423|G86423 probable hydrophilic protein
           29542-30030 [imported] - Arabidopsis thaliana, partial
           (95%)
          Length = 676

 Score = 28.5 bits (62), Expect = 5.3
 Identities = 24/99 (24%), Positives = 47/99 (47%), Gaps = 13/99 (13%)
 Frame = +2

Query: 107 KSVDASNICKTSEKIFEMIDAVVEEVGEDNVV----QVVTDNAANYKAAGEMLMRK---- 158
           K+ D + + K   K  ++      ++GE+ +V     ++ ++A  YK  G +L+++    
Sbjct: 92  KANDLNKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLNEDANVYKLIGPVLVKQDLAE 271

Query: 159 -----RKKLYWTPCAAHCLDLMLEDLEKKIPIHGETIPK 192
                RK++ +       LD  ++DLE+K     ETI K
Sbjct: 272 ANANVRKRIEYISAELKRLDATVQDLEEKQNSKKETIMK 388


>TC78645 similar to GP|19310705|gb|AAL85083.1 unknown protein {Arabidopsis
           thaliana}, partial (70%)
          Length = 1101

 Score = 27.7 bits (60), Expect = 9.1
 Identities = 15/63 (23%), Positives = 33/63 (51%)
 Frame = +1

Query: 247 MFTSKEWKSGKCAKLRDGKALEDIILDKKFWKDIVICLKGATPLMKVLRLADLDKKTSHG 306
           +F+    K+  CA++     +ED++ + + W+D+         L+K+ +L D+ + TS  
Sbjct: 85  LFSCLSSKAFLCAEILKTGVMEDVVSNTRRWEDL-----DTDILVKIFQLLDIFELTSGI 249

Query: 307 IHL 309
            H+
Sbjct: 250 AHV 258


>TC92748 similar to SP|P53393|SUT3_STYHA Low affinity sulphate transporter
           3. {Stylosanthes hamata}, partial (20%)
          Length = 536

 Score = 27.7 bits (60), Expect = 9.1
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +2

Query: 155 LMRKRKKLYWTPCAAHCLDLMLEDL 179
           + RK+KKL+W P  A  L ++L  L
Sbjct: 131 IARKKKKLFWLPAIAPLLSVILSTL 205


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.325    0.138    0.432 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,936,677
Number of Sequences: 36976
Number of extensions: 187083
Number of successful extensions: 1219
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1213
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1217
length of query: 437
length of database: 9,014,727
effective HSP length: 99
effective length of query: 338
effective length of database: 5,354,103
effective search space: 1809686814
effective search space used: 1809686814
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 60 (27.7 bits)