BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC147428.3 - phase: 0
(364 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL382911 similar to GP|21902044|dbj hypothetical protein~similar... 179 2e-45
BE124805 similar to GP|10177426|db GATA-binding transcription fa... 169 1e-42
TC78378 similar to GP|10177426|dbj|BAB10711. GATA-binding transc... 163 1e-40
TC80004 similar to GP|8778844|gb|AAF79843.1| T6D22.9 {Arabidopsi... 136 1e-32
AL382912 similar to PIR|T52104|T521 GATA-binding transcription f... 125 3e-29
AW256569 similar to GP|10177426|dbj GATA-binding transcription f... 120 8e-28
CA921267 homologue to GP|10177426|dbj GATA-binding transcription... 117 7e-27
TC89696 similar to GP|10177426|dbj|BAB10711. GATA-binding transc... 73 7e-27
TC88635 similar to GP|12711287|emb|CAC28528. GATA-1 zinc finger ... 115 3e-26
BG583956 homologue to GP|10177159|dbj gb|AAF63824.1~gene_id:K21P... 60 1e-09
BE240450 similar to GP|21555178|gb| transcription factor-like pr... 57 1e-08
TC84058 weakly similar to GP|10177426|dbj|BAB10711. GATA-binding... 53 2e-07
AL370166 52 3e-07
TC81215 similar to GP|17064972|gb|AAL32640.1 Unknown protein {Ar... 52 4e-07
BI264172 homologue to PIR|T45739|T457 transcription factor-like ... 52 5e-07
TC80890 similar to PIR|T04270|T04270 hypothetical protein F20B18... 45 3e-05
TC88671 similar to PIR|JC7336|JC7336 zinc-finger protein - Arabi... 42 3e-04
TC92996 42 5e-04
TC83875 similar to GP|17380994|gb|AAL36309.1 putative GATA trans... 40 0.001
TC85373 similar to GP|15028099|gb|AAK76580.1 putative flowering ... 40 0.002
>AL382911 similar to GP|21902044|dbj hypothetical protein~similar to
Arabidopsis thaliana chromosome 5 At5g25830, partial
(6%)
Length = 261
Score = 179 bits (453), Expect = 2e-45
Identities = 85/86 (98%), Positives = 85/86 (98%)
Frame = +2
Query: 168 KAPNNVASKPYEESNPTVHSQVSVPAKARSKRSRVPPCNWTSRLLVLSPTTTTTTTTTTS 227
KAPNNV SKPYEESNPTVHSQVSVPAKARSKRSRVPPCNWTSRLLVLSPTTTTTTTTTTS
Sbjct: 2 KAPNNVXSKPYEESNPTVHSQVSVPAKARSKRSRVPPCNWTSRLLVLSPTTTTTTTTTTS 181
Query: 228 SHSDTMAPPKKPSPRKRDPNDGGEGR 253
SHSDTMAPPKKPSPRKRDPNDGGEGR
Sbjct: 182 SHSDTMAPPKKPSPRKRDPNDGGEGR 259
>BE124805 similar to GP|10177426|db GATA-binding transcription factor-like
protein {Arabidopsis thaliana}, partial (36%)
Length = 715
Score = 169 bits (429), Expect = 1e-42
Identities = 95/196 (48%), Positives = 121/196 (61%), Gaps = 3/196 (1%)
Frame = +2
Query: 131 ELSVPYDDLAELEWVSKFAEESFSS-EDLHKLQLISGLKAPNNVASKPYEESNPTVHSQV 189
EL+VP ++ A+LEW+S F E+SFS LQL PN S P ++
Sbjct: 74 ELTVPVEEAADLEWLSYFVEDSFSEFPKTENLQLQQKAHEPNPTFSTPCFKT-------- 229
Query: 190 SVPAKARSKRSRVPPCNWTSRLLVLSPTTTTTTTTTTSSHSDTMAPPKKPSPRKRDPNDG 249
VPAKARSKR+R W L S +T+++ T ++S+ + P +K + R P+
Sbjct: 230 PVPAKARSKRTRTGIRVWPISL-ANSSSTSSSATLSSSNLEECSKPAEKKAKRMVSPDGE 406
Query: 250 GEG--RKCLHCATDKTPQWRTGPLGPKTLCNACGVRYKSGRLVPEYRPAASPTFVLTKHS 307
G R+C HC KTPQWRTGP GPKTLCNACGVRYKSGRL+PEYRPA SPTF HS
Sbjct: 407 ARGVPRRCSHCGVQKTPQWRTGPGGPKTLCNACGVRYKSGRLLPEYRPACSPTFSSELHS 586
Query: 308 NSHRKVQELRRQKEMM 323
N HRKV E+RR+KE++
Sbjct: 587 NHHRKVIEMRRKKEVV 634
>TC78378 similar to GP|10177426|dbj|BAB10711. GATA-binding transcription
factor-like protein {Arabidopsis thaliana}, partial
(23%)
Length = 1284
Score = 163 bits (412), Expect = 1e-40
Identities = 120/331 (36%), Positives = 158/331 (47%), Gaps = 28/331 (8%)
Frame = +3
Query: 21 LPILSHFIIFF-------------ASTSKPNNNNNLT-QPMEAQEFFQSDNNSNTNNVNT 66
LP L F+ FF A KP+ + Q +E F N+
Sbjct: 114 LPFLLRFLFFFFFFFFTEKMEFAVAKALKPSLRSEFVFQQTLGEELFSFTANT------V 275
Query: 67 AASDHFIVEDLFDFSNE-DVAIEDPTFEESPPTNSNDSPPLETNPTSNFFTDNSCQNSAD 125
A + F V+DL DFS+ D+ D +E + S S L + SN T S +S
Sbjct: 276 VAGEDFSVDDLLDFSHGGDILHHDGDEQEKESSLSPSSQSLSEDNNSNS-TGASFDSSI- 449
Query: 126 GPFSGELSVPYDDLAELEWVSKFAEESFSSEDLHKLQLISGLKAPNNVASKPYEESNPTV 185
FS EL VP DD+A LEWVS F ++S L +L L+ ++ N K +E +
Sbjct: 450 --FSTELLVPDDDVAGLEWVSHFVDDS-----LPELSLLYPVQIQTNACPKQHETQHGKT 608
Query: 186 ----HSQVSVPAKARSKRSRVP-PCNWTSRLLVLSPTTTTTTTTTTSSHSDTMAPPKKPS 240
++ + K R+ ++R P P W R SP+ APP K
Sbjct: 609 LRFSTEKMKITTKTRTVKNRKPNPRVWAQRPFFPSPSVVFG------------APPAKKQ 752
Query: 241 PRKRDPN--------DGGEGRKCLHCATDKTPQWRTGPLGPKTLCNACGVRYKSGRLVPE 292
+K + +G R+C HC KTPQWRTGP+G KTLCNACGVRYKSGRL E
Sbjct: 753 KKKPEAQVVGHEAQEEGQLQRRCSHCQVQKTPQWRTGPMGAKTLCNACGVRYKSGRLFSE 932
Query: 293 YRPAASPTFVLTKHSNSHRKVQELRRQKEMM 323
YRPA SPTF HSNSHRKV E+R++K M+
Sbjct: 933 YRPACSPTFSSEIHSNSHRKVLEMRKRKGMV 1025
>TC80004 similar to GP|8778844|gb|AAF79843.1| T6D22.9 {Arabidopsis
thaliana}, partial (8%)
Length = 1058
Score = 136 bits (343), Expect = 1e-32
Identities = 96/242 (39%), Positives = 117/242 (47%), Gaps = 45/242 (18%)
Frame = +3
Query: 121 QNSADGPFSGELSVPYDDLAE---------LEWVSKFAEESFSSEDLHKLQLISGLK--- 168
Q P LS DDL +EW+S F E+ FSS L L S ++
Sbjct: 144 QEKVLNPSCSNLSSSLDDLFSAQNMEVDVGMEWLSVFVEDCFSSPQSCVL-LPSSVQNTT 320
Query: 169 -----APNNVASKPYEESNPTVHSQVSVPAKARSKRSRVP-PCNWTSRLLVLSPTTTTTT 222
P+N KP +E N S +VP KARSKR R+ P L +LS T
Sbjct: 321 STVSSKPSNTVKKPKQEQN---ESPFAVPGKARSKRKRLSAPRRPKDPLSILSNTLNPQN 491
Query: 223 TTTTS-----------SHSDTMAPPKKPSPRKRDP-------------NDGGEG---RKC 255
+ S + S+ M P + K N+G R+C
Sbjct: 492 ESLCSDPPLLKQAYWLADSELMVPKGEKEVTKDCEVVEKERFDFEGFVNNGQNPIPTRRC 671
Query: 256 LHCATDKTPQWRTGPLGPKTLCNACGVRYKSGRLVPEYRPAASPTFVLTKHSNSHRKVQE 315
HC + +TPQWR GPLGPKTLCNACGVRYKSGRL+PEYRPA SPTFV HSNSH+KV E
Sbjct: 672 THCLSQRTPQWRAGPLGPKTLCNACGVRYKSGRLLPEYRPAKSPTFVSFLHSNSHKKVME 851
Query: 316 LR 317
+R
Sbjct: 852 MR 857
>AL382912 similar to PIR|T52104|T521 GATA-binding transcription factor
homolog 2 [imported] - Arabidopsis thaliana, partial
(6%)
Length = 315
Score = 125 bits (314), Expect = 3e-29
Identities = 58/58 (100%), Positives = 58/58 (100%)
Frame = +3
Query: 307 SNSHRKVQELRRQKEMMRAQQHQLLQLQHHHSIMFEGPSNGDDYLIHQHVGPDFTHLI 364
SNSHRKVQELRRQKEMMRAQQHQLLQLQHHHSIMFEGPSNGDDYLIHQHVGPDFTHLI
Sbjct: 3 SNSHRKVQELRRQKEMMRAQQHQLLQLQHHHSIMFEGPSNGDDYLIHQHVGPDFTHLI 176
>AW256569 similar to GP|10177426|dbj GATA-binding transcription factor-like
protein {Arabidopsis thaliana}, partial (20%)
Length = 613
Score = 120 bits (301), Expect = 8e-28
Identities = 57/87 (65%), Positives = 64/87 (73%), Gaps = 2/87 (2%)
Frame = -3
Query: 238 KPSPRKRDPNDGGEG--RKCLHCATDKTPQWRTGPLGPKTLCNACGVRYKSGRLVPEYRP 295
K +K + GG R+C HC KTPQWR GPLGPKTLCNACGVR+KSGRL PEYRP
Sbjct: 560 KKQRKKPEAQTGGAHFQRRCSHCHVQKTPQWRAGPLGPKTLCNACGVRFKSGRLFPEYRP 381
Query: 296 AASPTFVLTKHSNSHRKVQELRRQKEM 322
A SPTF HSNSHRKV E+RR+KE+
Sbjct: 380 ACSPTFSGEIHSNSHRKVLEMRRRKEV 300
>CA921267 homologue to GP|10177426|dbj GATA-binding transcription factor-like
protein {Arabidopsis thaliana}, partial (20%)
Length = 694
Score = 117 bits (293), Expect = 7e-27
Identities = 51/71 (71%), Positives = 59/71 (82%)
Frame = -1
Query: 253 RKCLHCATDKTPQWRTGPLGPKTLCNACGVRYKSGRLVPEYRPAASPTFVLTKHSNSHRK 312
R+C HC KTPQWR+GPLG KTLCNACGVR+KSGRL+PEYRPA SPTF HSN HRK
Sbjct: 538 RRCSHCGVTKTPQWRSGPLGAKTLCNACGVRFKSGRLLPEYRPACSPTFSSELHSNHHRK 359
Query: 313 VQELRRQKEMM 323
V E+RR+KE++
Sbjct: 358 VLEMRRKKEVV 326
>TC89696 similar to GP|10177426|dbj|BAB10711. GATA-binding transcription
factor-like protein {Arabidopsis thaliana}, partial
(25%)
Length = 806
Score = 73.2 bits (178), Expect(2) = 7e-27
Identities = 65/223 (29%), Positives = 88/223 (39%), Gaps = 15/223 (6%)
Frame = +2
Query: 74 VEDLFDFSNEDVAIEDPTFEESPPTNSNDS--PPLETNPTSNFFTDNSCQNSADGPFSGE 131
V+DL DFS+ D+ +D ++ P + S P P+ N + NS + E
Sbjct: 77 VDDLLDFSS-DIGEDD---DDDKPKKAFPSLKPECSDPPSLNPLALDDPINSLSEEVAEE 244
Query: 132 LSVPYDDLAELEWVSK---------FAEESFSSEDLHKLQLISGLKAPNNVASKPYEESN 182
ELEW+S F + S DL K Q+ S + + +S SN
Sbjct: 245 ---------ELEWLSNKDAFPAVETFVDLSCIQPDLLKHQMTSPMLENSTSSSNSNNSSN 397
Query: 183 PTV----HSQVSVPAKARSKRSRVPPCNWTSRLLVLSPTTTTTTTTTTSSHSDTMAPPKK 238
++ + P +ARSK P + P +T T+ T
Sbjct: 398 SITLLSGYNHMKFPVRARSKSRSKPRLGLADASNLQFPWKQPSTKTSKEKVKQTPTI--- 568
Query: 239 PSPRKRDPNDGGEGRKCLHCATDKTPQWRTGPLGPKTLCNACG 281
GRKC HC D TPQWR GP GPKTLCNACG
Sbjct: 569 -------------GRKCHHCGVDDTPQWRAGPNGPKTLCNACG 658
Score = 65.1 bits (157), Expect(2) = 7e-27
Identities = 31/42 (73%), Positives = 33/42 (77%)
Frame = +3
Query: 281 GVRYKSGRLVPEYRPAASPTFVLTKHSNSHRKVQELRRQKEM 322
GVRYKSGRLVPEYRPA PTF HSN HRKV E+R+QK M
Sbjct: 657 GVRYKSGRLVPEYRPANRPTFRSDVHSNXHRKVVEMRKQKGM 782
>TC88635 similar to GP|12711287|emb|CAC28528. GATA-1 zinc finger protein
{Nicotiana tabacum}, partial (21%)
Length = 1327
Score = 115 bits (288), Expect = 3e-26
Identities = 52/86 (60%), Positives = 62/86 (71%)
Frame = +1
Query: 253 RKCLHCATDKTPQWRTGPLGPKTLCNACGVRYKSGRLVPEYRPAASPTFVLTKHSNSHRK 312
RKC HC +TPQWR GP GPKTLCNACGVRY+SGRL PEYRPAASPTF + HSNSH+K
Sbjct: 820 RKCTHCEVTETPQWREGPKGPKTLCNACGVRYRSGRLFPEYRPAASPTFEASVHSNSHKK 999
Query: 313 VQELRRQKEMMRAQQHQLLQLQHHHS 338
V E+R++ + +L L + S
Sbjct: 1000VLEIRKKVNQETVKGSSMLYLSSNLS 1077
>BG583956 homologue to GP|10177159|dbj gb|AAF63824.1~gene_id:K21P3.18~similar
to unknown protein {Arabidopsis thaliana}, partial (43%)
Length = 818
Score = 60.1 bits (144), Expect = 1e-09
Identities = 26/56 (46%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = +2
Query: 229 HSDTMAPPKKPSPRKRDPNDGGEGRK-CLHCATDKTPQWRTGPLGPKTLCNACGVR 283
HSD ++ + +P +D +K C C T KTP WR GP GPK+LCNACG+R
Sbjct: 188 HSDKVSEGEDSNPNAAVSSDNSNPKKTCADCGTSKTPLWRGGPAGPKSLCNACGIR 355
>BE240450 similar to GP|21555178|gb| transcription factor-like protein
{Arabidopsis thaliana}, partial (18%)
Length = 529
Score = 57.0 bits (136), Expect = 1e-08
Identities = 22/39 (56%), Positives = 27/39 (68%)
Frame = +1
Query: 247 NDGGEGRKCLHCATDKTPQWRTGPLGPKTLCNACGVRYK 285
ND R+C C + TP WR GP GP++LCNACG+RYK
Sbjct: 10 NDSLLARRCASCDSTSTPLWRNGPRGPESLCNACGIRYK 126
>TC84058 weakly similar to GP|10177426|dbj|BAB10711. GATA-binding
transcription factor-like protein {Arabidopsis
thaliana}, partial (15%)
Length = 526
Score = 52.8 bits (125), Expect = 2e-07
Identities = 35/100 (35%), Positives = 49/100 (49%), Gaps = 3/100 (3%)
Frame = +1
Query: 56 DNNSNTNNVNTAASDHFIVEDLFDFSNEDVAIEDPTFEESPPTNSNDSPPL---ETNPTS 112
D S N N SD F V+DL DFS+ + + EE S L + + TS
Sbjct: 124 DEISALNAQNGTTSDDFFVDDLLDFSHVEEQQQQQEQEEQHQQQQEHSLCLSLKQNHETS 303
Query: 113 NFFTDNSCQNSADGPFSGELSVPYDDLAELEWVSKFAEES 152
N T S + + +L+VP DD+A+LEW+S F E+S
Sbjct: 304 NPNTTFSLKEDYSSLPTNDLNVPSDDVADLEWLSHFVEDS 423
>AL370166
Length = 405
Score = 52.4 bits (124), Expect = 3e-07
Identities = 41/133 (30%), Positives = 53/133 (39%), Gaps = 27/133 (20%)
Frame = +3
Query: 36 KPNNNNNLTQPMEAQEFFQSDNNSNTNNVNTAASDH---------FIVEDLFDFSNEDVA 86
K N T MEAQ++F N + H F ++DL DFSN DV
Sbjct: 30 KNYTNFAFTNEMEAQDYFVGGYYGAGENQFSPEKRHGDQKPPCEPFAIDDLLDFSNADVI 209
Query: 87 IEDPTFEESPPTNSNDSPPLETNPTSNFFTDNSCQNSADG------------------PF 128
+ D F+ + NS DS SN +SC +S G
Sbjct: 210 MSDGFFDNNVAGNSTDS--------SNVTAVDSCNSSGSGGDNRFGGTIVPYGFSGDVQL 365
Query: 129 SGELSVPYDDLAE 141
+GEL VPYDD+AE
Sbjct: 366 TGELCVPYDDMAE 404
>TC81215 similar to GP|17064972|gb|AAL32640.1 Unknown protein {Arabidopsis
thaliana}, partial (14%)
Length = 938
Score = 52.0 bits (123), Expect = 4e-07
Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Frame = +3
Query: 248 DGGEGRKCLHCATDKTPQWRTGPLGPKTLCNACGVRYKSGRLVPEYRPAASPTFVLTKHS 307
D G+ C HC TP WR GP LCNACG R+++ + Y P + T +
Sbjct: 426 DMGKQGPCFHCGVTSTPLWRNGPPEKPILCNACGSRWRTKGTLANYTPLHARTDPVDFED 605
Query: 308 N--SHRKVQELRRQKEMMRAQQHQ 329
S K+ L + KE+ ++ Q
Sbjct: 606 QRVSRLKIVSLNKNKEVKLVKRKQ 677
>BI264172 homologue to PIR|T45739|T457 transcription factor-like protein -
Arabidopsis thaliana, partial (4%)
Length = 568
Score = 51.6 bits (122), Expect = 5e-07
Identities = 49/171 (28%), Positives = 72/171 (41%), Gaps = 21/171 (12%)
Frame = +3
Query: 3 FSLTTPNHKLCHTLFLQLLPILSHFIIFFASTSKPNN--NNNLTQPMEAQEFFQSDNNS- 59
FS + P L L L L HF F K L + + FQ
Sbjct: 54 FSASKPKETL---LRFPLFVTLHHFYFFIREKKKMEVVVAEALKPSLRTESIFQQTICEE 224
Query: 60 ----NTNNVNTAASDHFIVEDLFDFSN---------EDVAI----EDPTFEESPPTNSND 102
N NNV + F V+DL DFSN ++V + E+ E++ T+ ++
Sbjct: 225 ILCLNANNV--VVGEDFSVDDLLDFSNGEFQHGSVGKEVDVCEEEEEEEHEKNSTTSGSE 398
Query: 103 SPPLETNPTSNFFTDNSC-QNSADGPFSGELSVPYDDLAELEWVSKFAEES 152
E + SN T + ++ F+G L+VP DD+A+LEWVS F + S
Sbjct: 399 HERTEDDDNSNSTTFSGAGDGESNSIFAGGLAVPADDVADLEWVSHFVDXS 551
>TC80890 similar to PIR|T04270|T04270 hypothetical protein F20B18.260 -
Arabidopsis thaliana, partial (14%)
Length = 710
Score = 45.4 bits (106), Expect = 3e-05
Identities = 22/64 (34%), Positives = 32/64 (49%)
Frame = +1
Query: 264 PQWRTGPLGPKTLCNACGVRYKSGRLVPEYRPAASPTFVLTKHSNSHRKVQELRRQKEMM 323
P WR+GP GPK+LCNACG+R + R V K +K+Q R++ +
Sbjct: 7 PLWRSGPTGPKSLCNACGIRQRKARRALAAAANGETLVVAEKPYVKGKKLQIKRKRSKTD 186
Query: 324 RAQQ 327
+ Q
Sbjct: 187 QCAQ 198
>TC88671 similar to PIR|JC7336|JC7336 zinc-finger protein - Arabidopsis
thaliana, partial (44%)
Length = 1272
Score = 42.4 bits (98), Expect = 3e-04
Identities = 17/30 (56%), Positives = 20/30 (66%), Gaps = 2/30 (6%)
Frame = +3
Query: 255 CLHCATDK--TPQWRTGPLGPKTLCNACGV 282
C HC T TP R GP GP++LCNACG+
Sbjct: 726 CTHCGTSSKSTPMMRRGPSGPRSLCNACGL 815
>TC92996
Length = 669
Score = 41.6 bits (96), Expect = 5e-04
Identities = 37/122 (30%), Positives = 55/122 (44%), Gaps = 16/122 (13%)
Frame = +1
Query: 97 PTNSNDSPPLETNPTSNFFTDNSCQNSADGPFSGELSVPYDDLAE---------LEWVSK 147
P +S+ PPL+ + +N S F E S DDL +EW+S
Sbjct: 43 PPSSSSHPPLDMDICNNV--------SVSEEFQQEFST-IDDLFPAHNTEVDLGMEWLSV 195
Query: 148 FAEESFSSEDLHKLQLISGLK-------APNNVASKPYEESNPTVHSQVSVPAKARSKRS 200
F EE FSS+ + S ++ P+N KP +++ + + V VP KARSKR
Sbjct: 196 FVEECFSSKPSCVIAPSSNVQIQESTNTKPSNTMQKPQQQNQSYLQNFV-VPGKARSKRK 372
Query: 201 RV 202
R+
Sbjct: 373 RL 378
>TC83875 similar to GP|17380994|gb|AAL36309.1 putative GATA transcription
factor 3 {Arabidopsis thaliana}, partial (8%)
Length = 828
Score = 40.4 bits (93), Expect = 0.001
Identities = 18/25 (72%), Positives = 20/25 (80%)
Frame = +1
Query: 293 YRPAASPTFVLTKHSNSHRKVQELR 317
YRPA SPT V + HSNSHRKV E+R
Sbjct: 67 YRPANSPTLVASVHSNSHRKVLEMR 141
>TC85373 similar to GP|15028099|gb|AAK76580.1 putative flowering protein
CONSTANS {Arabidopsis thaliana}, partial (22%)
Length = 683
Score = 39.7 bits (91), Expect = 0.002
Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 4/42 (9%)
Frame = +1
Query: 247 NDGGEGRK--CLHCATDK--TPQWRTGPLGPKTLCNACGVRY 284
NDG + + C C + TP R GP GP+TLCNACG+ +
Sbjct: 220 NDGSQQQDNVCRQCNISEKCTPMMRRGPEGPRTLCNACGLMW 345
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.313 0.129 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,544,712
Number of Sequences: 36976
Number of extensions: 230887
Number of successful extensions: 2778
Number of sequences better than 10.0: 167
Number of HSP's better than 10.0 without gapping: 2139
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2446
length of query: 364
length of database: 9,014,727
effective HSP length: 97
effective length of query: 267
effective length of database: 5,428,055
effective search space: 1449290685
effective search space used: 1449290685
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 59 (27.3 bits)
Medicago: description of AC147428.3