BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC147179.6 + phase: 0 /pseudo
(660 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC91503 similar to GP|20161013|dbj|BAB89946. putative ovule deve... 596 e-171
TC93444 similar to GP|22136940|gb|AAM91814.1 unknown protein {Ar... 119 2e-39
BQ122372 similar to PIR|B96750|B96 hypothetical protein F28P22.2... 144 1e-34
TC88593 homologue to GP|13272407|gb|AAK17142.1 putative AP2 doma... 112 3e-25
TC89787 similar to GP|18476518|gb|AAL50205.1 APETALA2-like prote... 91 1e-18
BE998204 similar to GP|20161013|dbj putative ovule development p... 91 2e-18
TC82165 homologue to PIR|C84686|C84686 probable AP2 domain trans... 89 7e-18
TC82951 homologue to GP|13173164|gb|AAK14326.1 APETAL2-like prot... 68 6e-17
CB893400 similar to PIR|B86197|B861 hypothetical protein [import... 60 2e-09
TC88745 similar to GP|21304225|gb|AAL47210.1 aintegumenta-like p... 59 8e-09
TC88951 similar to GP|17979408|gb|AAL49846.1 putative ethylene r... 55 7e-08
BQ124998 similar to GP|20196893|gb| putative AP2 domain transcri... 55 1e-07
BG587357 similar to GP|9757933|dbj| contains similarity to unkno... 54 2e-07
TC86273 similar to SP|O80340|ERF4_ARATH Ethylene responsive elem... 54 2e-07
TC78789 homologue to PIR|T48580|T48580 hypothetical protein T31B... 53 3e-07
TC86558 similar to GP|20805105|dbj|BAB92777. contains ESTs AU065... 52 1e-06
TC80833 weakly similar to PIR|D86175|D86175 hypothetical protein... 51 1e-06
TC93662 similar to GP|10177219|dbj|BAB10294. contains similarity... 50 2e-06
TC88083 similar to GP|4587373|dbj|BAA76734.1 ethylene responsive... 50 3e-06
TC79845 similar to GP|21554069|gb|AAM63150.1 ethylene responsive... 50 3e-06
>TC91503 similar to GP|20161013|dbj|BAB89946. putative ovule development
protein aintegumenta-like protein {Oryza sativa
(japonica cultivar-group), partial (27%)
Length = 1057
Score = 596 bits (1537), Expect = e-171
Identities = 302/352 (85%), Positives = 308/352 (86%), Gaps = 28/352 (7%)
Frame = +2
Query: 285 RREGQTRKGRQVFVGGYDKEEKAARAYDLAALKYWGTTTTTNFPISHYEKEVEEMKHMTR 344
RREGQTRKGRQV++GGYDKEEKAARAYDLAALKYWGTTTTTNFPISHYEKEVEEMKHMTR
Sbjct: 2 RREGQTRKGRQVYLGGYDKEEKAARAYDLAALKYWGTTTTTNFPISHYEKEVEEMKHMTR 181
Query: 345 QEYVASLRRKSSGFSRGASIYRGVTRQ----------------------TSSTW*MAS*D 382
QEYVASLRRKSSGFSRGASIYRGVTR T ST A+
Sbjct: 182 QEYVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEA 361
Query: 383 WKSCR---QQRSLPRNF---QYDVKTILESSTLPIGGAAKRLKDMEQVELNHVNVDISHR 436
+ + S NF +YDVKTILESSTLPIGGAAKRLKDMEQVELNHVNVDISHR
Sbjct: 362 YDVAAIKFRGLSAVTNFDMSRYDVKTILESSTLPIGGAAKRLKDMEQVELNHVNVDISHR 541
Query: 437 TEQDHSIINNTSHLTEQAIYAATNASNWHALSFQHQQPHHHYNANNMQLQNYPYGTQTQK 496
TEQDHSIINNTSHLTEQAIYAATNASNWHALSFQHQQPHHHYNANNMQLQNYPYGTQTQK
Sbjct: 542 TEQDHSIINNTSHLTEQAIYAATNASNWHALSFQHQQPHHHYNANNMQLQNYPYGTQTQK 721
Query: 497 LWCKQEQDSDDHSTYTTATDIHQLQLGNNNNNTHNFFGLQNIMSMDSASMDNSSGSNSVV 556
LWCKQEQDSDDHSTYTTATDIHQLQLGNNNNNTHNFFGLQNIMSMDSASMDNSSGSNSVV
Sbjct: 722 LWCKQEQDSDDHSTYTTATDIHQLQLGNNNNNTHNFFGLQNIMSMDSASMDNSSGSNSVV 901
Query: 557 YGGGDHGGYGGNGGYMIPMAIANDGNQNPRSNNNFGESEIKGFGYENVFGTT 608
YGGGDHGGYGGNGGYMIPMAIANDGNQNPRSNNNFGESEIKGFGYENVFGTT
Sbjct: 902 YGGGDHGGYGGNGGYMIPMAIANDGNQNPRSNNNFGESEIKGFGYENVFGTT 1057
Score = 64.7 bits (156), Expect = 1e-10
Identities = 31/84 (36%), Positives = 50/84 (58%)
Frame = +2
Query: 250 RKSVDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQTRKGRQVFVGGYDKEEKAAR 309
R+ F + SIYRGVTRH GR++A + G+ + +++G + +E+AA
Sbjct: 203 RRKSSGFSRGASIYRGVTRHHQHGRWQARI--------GRVAGNKDLYLGTFSTQEEAAE 358
Query: 310 AYDLAALKYWGTTTTTNFPISHYE 333
AYD+AA+K+ G + TNF +S Y+
Sbjct: 359 AYDVAAIKFRGLSAVTNFDMSRYD 430
>TC93444 similar to GP|22136940|gb|AAM91814.1 unknown protein {Arabidopsis
thaliana}, partial (46%)
Length = 949
Score = 119 bits (299), Expect(2) = 2e-39
Identities = 57/80 (71%), Positives = 67/80 (83%)
Frame = +2
Query: 291 RKGRQVFVGGYDKEEKAARAYDLAALKYWGTTTTTNFPISHYEKEVEEMKHMTRQEYVAS 350
RKG + +G YD+EE AARAYDLAALKYWGT+T TNFPIS Y+KE+E M MT++EY+A+
Sbjct: 341 RKGSKFTLGXYDEEESAARAYDLAALKYWGTSTFTNFPISDYDKEIEIMNTMTKEEYLAT 520
Query: 351 LRRKSSGFSRGASIYRGVTR 370
LRRKSSGFSRG S YRGV R
Sbjct: 521 LRRKSSGFSRGVSKYRGVAR 580
Score = 64.7 bits (156), Expect = 1e-10
Identities = 37/110 (33%), Positives = 60/110 (53%)
Frame = +2
Query: 247 AVPRKSVDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQTRKGRQVFVGGYDKEEK 306
A R+ F + S YRGV RH GR+EA + G+ + +++G Y +E+
Sbjct: 515 ATLRRKSSGFSRGVSKYRGVARHHHNGRWEARI--------GRVFGNKYLYLGTYSTQEE 670
Query: 307 AARAYDLAALKYWGTTTTTNFPISHYEKEVEEMKHMTRQEYVASLRRKSS 356
AARAYD+AA++Y G TNF +S Y K ++ + T + + + + +K S
Sbjct: 671 AARAYDIAAIEYRGIHAVTNFELSSYIKWLKP-ETTTEENHESQILQKES 817
Score = 61.6 bits (148), Expect(2) = 2e-39
Identities = 28/63 (44%), Positives = 41/63 (64%)
Frame = +1
Query: 237 DSNQTSVVESAVPRKSVDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQTRKGRQV 296
D+N+ + + V S +R+S +RGV+RHRWTGR+EAHLWD Q +KG+QV
Sbjct: 184 DANK--MAQKQVGENSTTNTSKRSSRFRGVSRHRWTGRFEAHLWDKLSWNTTQKKKGKQV 357
Query: 297 FVG 299
++G
Sbjct: 358 YLG 366
>BQ122372 similar to PIR|B96750|B96 hypothetical protein F28P22.24 [imported]
- Arabidopsis thaliana, partial (37%)
Length = 513
Score = 144 bits (363), Expect = 1e-34
Identities = 87/159 (54%), Positives = 100/159 (62%), Gaps = 28/159 (17%)
Frame = +1
Query: 287 EGQTRKGRQVFVGGYDKEEKAARAYDLAALKYWGTTTTTNFPISHYEKEVEEMKHMTRQE 346
EG R RQV++GGYDKEEKAA+AYDLAALKYWG TT NFP+S Y+KE+EEMKHMTRQE
Sbjct: 1 EGANRIRRQVYLGGYDKEEKAAKAYDLAALKYWGPTTHINFPLSTYDKELEEMKHMTRQE 180
Query: 347 YVASLRRKSSGFSRGASIYRGVTRQ----------------------TSSTW*MAS*DWK 384
+VA+LRRKSSGFSRGAS+YRGVTR T ST A+ +
Sbjct: 181 FVANLRRKSSGFSRGASVYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYD 360
Query: 385 SCR---QQRSLPRNF---QYDVKTILESSTLPIGGAAKR 417
+ S NF +YDVK I SSTL G AKR
Sbjct: 361 IAAIKFRGNSAVTNFDISRYDVKRICSSSTLITGDLAKR 477
Score = 66.2 bits (160), Expect = 4e-11
Identities = 31/84 (36%), Positives = 50/84 (58%)
Frame = +1
Query: 250 RKSVDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQTRKGRQVFVGGYDKEEKAAR 309
R+ F + S+YRGVTRH GR++A + G+ + +++G + +E+AA
Sbjct: 196 RRKSSGFSRGASVYRGVTRHHQHGRWQARI--------GRVAGNKDLYLGTFSTQEEAAE 351
Query: 310 AYDLAALKYWGTTTTTNFPISHYE 333
AYD+AA+K+ G + TNF IS Y+
Sbjct: 352 AYDIAAIKFRGNSAVTNFDISRYD 423
>TC88593 homologue to GP|13272407|gb|AAK17142.1 putative AP2 domain
transcription factor {Arabidopsis thaliana}, partial
(38%)
Length = 1052
Score = 112 bits (281), Expect = 3e-25
Identities = 56/118 (47%), Positives = 80/118 (67%)
Frame = +3
Query: 259 RTSIYRGVTRHRWTGRYEAHLWDNSCRREGQTRKGRQVFVGGYDKEEKAARAYDLAALKY 318
R+S YRGVT +R TGR+E+H+WD C G+QV++GG+D AARAYD AA+K+
Sbjct: 579 RSSQYRGVTFYRRTGRWESHIWD--C--------GKQVYLGGFDTAHAAARAYDRAAIKF 728
Query: 319 WGTTTTTNFPISHYEKEVEEMKHMTRQEYVASLRRKSSGFSRGASIYRGVTRQTSSTW 376
G NF + YE+++ +MK+++++E+V LRR S+GFSRG+S YRGVT W
Sbjct: 729 RGLDADINFNLVEYEEDMNQMKNLSKEEFVHILRRHSNGFSRGSSKYRGVTLHKCGRW 902
Score = 38.1 bits (87), Expect = 0.011
Identities = 32/88 (36%), Positives = 39/88 (43%)
Frame = +3
Query: 250 RKSVDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQTRKGRQVFVGGYDKEEKAAR 309
R+ + F + +S YRGVT H+ GR+EA R GQ +
Sbjct: 828 RRHSNGFSRGSSKYRGVTLHK-CGRWEA--------RMGQLL---------------GKK 935
Query: 310 AYDLAALKYWGTTTTTNFPISHYEKEVE 337
AYD AALK G TNF S YE E E
Sbjct: 936 AYDKAALKCNGREAVTNFEPSTYENEYE 1019
>TC89787 similar to GP|18476518|gb|AAL50205.1 APETALA2-like protein {Hordeum
vulgare} [Hordeum vulgare subsp. vulgare], partial (20%)
Length = 1163
Score = 90.9 bits (224), Expect = 1e-18
Identities = 51/132 (38%), Positives = 83/132 (62%), Gaps = 2/132 (1%)
Frame = +2
Query: 237 DSNQTSVVESAVPRKSVDTFG--QRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQTRKGR 294
+ N S+++ P+ + G R+S YRGVT +R TGR+E+H+WD C G+
Sbjct: 617 EQNGHSILQQKQPQVRKNRRGPRSRSSQYRGVTFYRRTGRWESHIWD--C--------GK 766
Query: 295 QVFVGGYDKEEKAARAYDLAALKYWGTTTTTNFPISHYEKEVEEMKHMTRQEYVASLRRK 354
QV++GG+D AARAYD AA+ + G NF +S YE ++++M+ ++++E+V LRRK
Sbjct: 767 QVYLGGFDTAHAAARAYDRAAVMFRGVDADINFNLSDYE-DLKQMRGLSKEEFVLRLRRK 943
Query: 355 SSGFSRGASIYR 366
++ S+ +S YR
Sbjct: 944 TNENSKRSSTYR 979
>BE998204 similar to GP|20161013|dbj putative ovule development protein
aintegumenta-like protein {Oryza sativa (japonica
cultivar-group), partial (13%)
Length = 288
Score = 90.5 bits (223), Expect = 2e-18
Identities = 42/59 (71%), Positives = 50/59 (84%), Gaps = 1/59 (1%)
Frame = +1
Query: 319 WGTTTTTNFPISHYEKEVEEMKHMTRQEYVASLRRKSSGFSRGASIYRGVTR-QTSSTW 376
WG T TTNFP+S+Y KE+EEMK++T+ E++ASLRRKSSGFSRGASIYRGVTR TW
Sbjct: 1 WGPTATTNFPVSNYAKELEEMKNVTQHEFIASLRRKSSGFSRGASIYRGVTRHHQQGTW 177
Score = 47.8 bits (112), Expect = 1e-05
Identities = 25/67 (37%), Positives = 38/67 (56%)
Frame = +1
Query: 250 RKSVDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQTRKGRQVFVGGYDKEEKAAR 309
R+ F + SIYRGVTRH G ++A R G+ + +++G + EE+AA
Sbjct: 100 RRKSSGFSRGASIYRGVTRHHQQGTWQA--------RIGRVAGNKDLYLGTFSTEEEAAD 255
Query: 310 AYDLAAL 316
AYD+AA+
Sbjct: 256 AYDIAAI 276
>TC82165 homologue to PIR|C84686|C84686 probable AP2 domain transcription
factor [imported] - Arabidopsis thaliana, partial (37%)
Length = 1182
Score = 88.6 bits (218), Expect = 7e-18
Identities = 65/195 (33%), Positives = 102/195 (51%), Gaps = 5/195 (2%)
Frame = +3
Query: 180 NNNNNNNESGARVQTLSLSM--STGSQSSSSVPLLNANVMSGEISSSENKQPPTTAVVLD 237
N + + + R TLS + + GS S++ V V SSS + + + ++
Sbjct: 549 NADGDEDSCSTRDFTLSFDILKTEGSNSNNVVTKEFFPVKLQATSSSFSMKNGSVDFSIN 728
Query: 238 SNQTSVVESAVPRKSVDTFG--QRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQTRKGRQ 295
N+ + A + G R+S YRGVT +R TGR+E+H+WD C G+Q
Sbjct: 729 QNEEMKIVQAPQQVKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWD--C--------GKQ 878
Query: 296 VFVGGYDKEEKAARAYDLAALKYWGTTTTTNFPISHYEKEVEEMKHM-TRQEYVASLRRK 354
V++GG+D AARAYD AA+K+ G+ F + + + ++E+V LRR+
Sbjct: 879 VYLGGFDTAHAAARAYDRAAIKFRGSWC*HKFQFE*LPMMILNRRRIYQKKEFVQILRRQ 1058
Query: 355 SSGFSRGASIYRGVT 369
S+GFSRG+S Y+GVT
Sbjct: 1059SNGFSRGSSKYKGVT 1103
>TC82951 homologue to GP|13173164|gb|AAK14326.1 APETAL2-like protein {Pisum
sativum}, partial (38%)
Length = 700
Score = 68.2 bits (165), Expect(2) = 6e-17
Identities = 30/68 (44%), Positives = 49/68 (71%)
Frame = +2
Query: 293 GRQVFVGGYDKEEKAARAYDLAALKYWGTTTTTNFPISHYEKEVEEMKHMTRQEYVASLR 352
G+QV++GG+D AA AYD AA+K+ G NF I YE+++++M ++T++E+V LR
Sbjct: 173 GKQVYLGGFDTAHAAAPAYDXAAIKFRGVEADINFNIEDYEEDLKQMTNLTKEEFVHVLR 352
Query: 353 RKSSGFSR 360
R+S+ FS+
Sbjct: 353 RQSTWFSK 376
Score = 37.7 bits (86), Expect(2) = 6e-17
Identities = 15/23 (65%), Positives = 20/23 (86%)
Frame = +1
Query: 259 RTSIYRGVTRHRWTGRYEAHLWD 281
R+S YRGVT +R TGR+E+H+WD
Sbjct: 100 RSSQYRGVTFYRRTGRWESHIWD 168
>CB893400 similar to PIR|B86197|B861 hypothetical protein [imported] -
Arabidopsis thaliana, partial (34%)
Length = 565
Score = 60.5 bits (145), Expect = 2e-09
Identities = 42/124 (33%), Positives = 65/124 (51%), Gaps = 5/124 (4%)
Frame = +2
Query: 236 LDSNQTSVVESAVPRKSVDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQTRKGRQ 295
+ SN T +V+S+ P+KS Y+GV R W G++ A + D+ TRKG +
Sbjct: 17 ISSNSTQLVQSSSPKKS----------YKGVRRRPW-GKFAAEIRDS-------TRKGVR 142
Query: 296 VFVGGYDKEEKAARAYDLAALKYWGTTTTTNFPISHYEKEVEEMKHMTRQEY-----VAS 350
V++G +D E AA AYD AAL G+ NFP + +++M++ E V +
Sbjct: 143 VWIGTFDTAEAAALAYDQAALSTRGSMAVLNFPEHVVRESLKDMENNKSWEKDGSSPVLA 322
Query: 351 LRRK 354
L+RK
Sbjct: 323 LKRK 334
>TC88745 similar to GP|21304225|gb|AAL47210.1 aintegumenta-like protein
{Oryza sativa}, partial (20%)
Length = 1098
Score = 58.5 bits (140), Expect = 8e-09
Identities = 27/71 (38%), Positives = 43/71 (60%)
Frame = +2
Query: 263 YRGVTRHRWTGRYEAHLWDNSCRREGQTRKGRQVFVGGYDKEEKAARAYDLAALKYWGTT 322
YRGVTRH GR++A + G+ + +++G + +E+AA AYD+AA+K+ G
Sbjct: 2 YRGVTRHHQHGRWQARI--------GRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLN 157
Query: 323 TTTNFPISHYE 333
TNF +S Y+
Sbjct: 158 AVTNFDMSRYD 190
Score = 29.6 bits (65), Expect = 3.9
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +1
Query: 371 QTSSTW*MAS*DWKSCRQQRSLPRNFQY 398
+T W MA + +SCR+QR LP +FQ+
Sbjct: 16 KTPPAWPMAGKNRQSCRKQRPLPWHFQH 99
>TC88951 similar to GP|17979408|gb|AAL49846.1 putative ethylene reponse
factor AP2 domain transcription factor {Arabidopsis
thaliana}, partial (40%)
Length = 1084
Score = 55.5 bits (132), Expect = 7e-08
Identities = 60/180 (33%), Positives = 83/180 (45%), Gaps = 5/180 (2%)
Frame = +2
Query: 182 NNNNNESGARVQTLSLSMSTGSQSSSSVPLLNANVMSGEISSSENKQPPTTAVVLDSNQT 241
NN +N SG SLS ST S SS SV L N + E+SS+ T V+ QT
Sbjct: 215 NNYSNSSG------SLS-STESNSSGSV-LSNEPL---EVSSNT-----TYKQVIKETQT 346
Query: 242 SVVESAVPRKSVDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQTRKGRQVFVGGY 301
S P K + +RGV W G++ A + D+ TRKG +V++G +
Sbjct: 347 SSPPPPPPIKE-----SKKRAFRGVRTRPW-GKFAAEIRDS-------TRKGVRVWIGTF 487
Query: 302 DKEEKAARAYDLAALKYWGTTTTTNFPISHYEKEVEEMKHMTR-----QEYVASLRRKSS 356
D E AA AYD AA G+ NFP + ++EM ++ V +L+RK S
Sbjct: 488 DTAEAAALAYDQAAFSTRGSLAVLNFPEEVVRESLKEMASNSKPLDEGTSPVLALKRKHS 667
>BQ124998 similar to GP|20196893|gb| putative AP2 domain transcription factor
{Arabidopsis thaliana}, partial (14%)
Length = 650
Score = 54.7 bits (130), Expect = 1e-07
Identities = 26/45 (57%), Positives = 37/45 (81%)
Frame = +3
Query: 332 YEKEVEEMKHMTRQEYVASLRRKSSGFSRGASIYRGVTRQTSSTW 376
Y +++EE+++++R+EY+ASLRRKSSGFSRG S YRG+ SS W
Sbjct: 3 YTRDLEEIQNVSREEYLASLRRKSSGFSRGLSKYRGL----SSRW 125
>BG587357 similar to GP|9757933|dbj| contains similarity to unknown
protein~gb|AAD30633.1~gene_id:MSF19.5 {Arabidopsis
thaliana}, partial (7%)
Length = 610
Score = 53.9 bits (128), Expect = 2e-07
Identities = 60/211 (28%), Positives = 80/211 (37%), Gaps = 13/211 (6%)
Frame = +3
Query: 74 NNNIHTTQDWKENY---NNQNLLLGTSCMNQNVNNNNQQAQPKLENFLGGHSFTDHQEYG 130
N N + T D + N N L S N N N + + L F HSFT
Sbjct: 75 NQNQNQTMDKSSSSPPTNTNNTSLAFSLSNNNFPNPSHSSSSHLSLF---HSFTP----- 230
Query: 131 GSNSYSSLHLPP--------HQPEASCGGGDGSTSNNNSI-GLSMIKTWLRNQPPPPENN 181
Y S +PP + EAS DG T+N + G + +L + P
Sbjct: 231 ----YPSSIIPPSLTLTGSNNPVEASPEATDGGTTNLSIFTGGHKFEDFLGSSVAP---- 386
Query: 182 NNNNNESGARVQTLSLSMSTGSQS-SSSVPLLNANVMSGEISSSENKQPPTTAVVLDSNQ 240
+ T ST + +S + A G + N +P
Sbjct: 387 --TRTAAATCAPTQLQQFSTDNDVYNSELKKTIAACFPGGYPTEPNSEP----------- 527
Query: 241 TSVVESAVPRKSVDTFGQRTSIYRGVTRHRW 271
+ P+K+VDTFGQRTSIYRGVTRHRW
Sbjct: 528 ----QKPSPKKTVDTFGQRTSIYRGVTRHRW 608
>TC86273 similar to SP|O80340|ERF4_ARATH Ethylene responsive element binding
factor 4 (AtERF4). [Mouse-ear cress] {Arabidopsis
thaliana}, partial (43%)
Length = 1171
Score = 53.9 bits (128), Expect = 2e-07
Identities = 33/92 (35%), Positives = 46/92 (49%)
Frame = +3
Query: 237 DSNQTSVVESAVPRKSVDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQTRKGRQV 296
D+ T+ P S Q+ YRGV + W GRY A + D K +V
Sbjct: 102 DNRITNTTTGPGPNPSAQAQAQKEIRYRGVRKRPW-GRYAAEIRDPG--------KKTRV 254
Query: 297 FVGGYDKEEKAARAYDLAALKYWGTTTTTNFP 328
++G +D E+AARAYD AA ++ G+ TNFP
Sbjct: 255 WLGTFDTAEEAARAYDKAAREFRGSKAKTNFP 350
>TC78789 homologue to PIR|T48580|T48580 hypothetical protein T31B5.150 -
Arabidopsis thaliana, partial (33%)
Length = 1112
Score = 53.1 bits (126), Expect = 3e-07
Identities = 36/107 (33%), Positives = 54/107 (49%)
Frame = +1
Query: 222 SSSENKQPPTTAVVLDSNQTSVVESAVPRKSVDTFGQRTSIYRGVTRHRWTGRYEAHLWD 281
+SS N P A + + + ES P+ +D ++ YRGV + W G++ A + D
Sbjct: 238 TSSTNHNNPQMAQSISTTMVNE-ESQPPQPLLDQETKKKPHYRGVRQRPW-GKWAAEIRD 411
Query: 282 NSCRREGQTRKGRQVFVGGYDKEEKAARAYDLAALKYWGTTTTTNFP 328
+K +V++G +D E AA AYD AALK+ GT NFP
Sbjct: 412 --------PKKAARVWLGTFDTAEDAALAYDKAALKFKGTKAKLNFP 528
>TC86558 similar to GP|20805105|dbj|BAB92777. contains ESTs AU065506(C0784)
AU083422(C0784)~unknown protein, partial (47%)
Length = 1346
Score = 51.6 bits (122), Expect = 1e-06
Identities = 53/195 (27%), Positives = 86/195 (43%), Gaps = 8/195 (4%)
Frame = +1
Query: 159 NNSIGLSMIKTWLRNQPPPPENNNNNNNESGARVQTLSLSMSTGSQSSSSVPLLNANVMS 218
+N+I S WL + N +++ G + + G + ++S L N
Sbjct: 100 HNTISPSKTSPWLADTS---SNTHHHQRMCGGAIIADFIPRRDGRRLTASE--LWPNSFG 264
Query: 219 GEISSSE--------NKQPPTTAVVLDSNQTSVVESAVPRKSVDTFGQRTSIYRGVTRHR 270
+I SS ++QPP+T L +Q V V + QR ++YRG+ +
Sbjct: 265 QQIDSSNFGFSHTAADQQPPST---LKRSQPPKVNERVEKPLKK---QRKNLYRGIRQRP 426
Query: 271 WTGRYEAHLWDNSCRREGQTRKGRQVFVGGYDKEEKAARAYDLAALKYWGTTTTTNFPIS 330
W G++ A + D RKG +V++G ++ E+AARAYD A K G NFP
Sbjct: 427 W-GKWAAEIRD--------PRKGVRVWLGTFNTAEEAARAYDKEARKIRGKKAKVNFP-- 573
Query: 331 HYEKEVEEMKHMTRQ 345
++ E H TR+
Sbjct: 574 --NEDDEYTIHATRR 612
>TC80833 weakly similar to PIR|D86175|D86175 hypothetical protein [imported]
- Arabidopsis thaliana, partial (60%)
Length = 709
Score = 51.2 bits (121), Expect = 1e-06
Identities = 27/66 (40%), Positives = 38/66 (56%)
Frame = +1
Query: 263 YRGVTRHRWTGRYEAHLWDNSCRREGQTRKGRQVFVGGYDKEEKAARAYDLAALKYWGTT 322
YRG+ R W G++ A + D TRKG ++++G +D E+AARAYD AA + G
Sbjct: 178 YRGIRRRPW-GKFAAEIRD-------PTRKGTRIWLGTFDTAEQAARAYDAAAFHFRGHR 333
Query: 323 TTTNFP 328
NFP
Sbjct: 334 AILNFP 351
>TC93662 similar to GP|10177219|dbj|BAB10294. contains similarity to AP2
domain transcription factor~gene_id:MPF21.9 {Arabidopsis
thaliana}, partial (31%)
Length = 555
Score = 50.4 bits (119), Expect = 2e-06
Identities = 33/91 (36%), Positives = 47/91 (51%)
Frame = +3
Query: 238 SNQTSVVESAVPRKSVDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQTRKGRQVF 297
SN T E+A +T G+R YRGV + W G++ A + D K +V+
Sbjct: 186 SNTTQSSEAASTTNEEET-GERRRRYRGVRQRPW-GKWAAEIRD--------PHKAARVW 335
Query: 298 VGGYDKEEKAARAYDLAALKYWGTTTTTNFP 328
+G ++ E AARAYD AAL++ G NFP
Sbjct: 336 LGTFETAEAAARAYDEAALRFRGNRAKLNFP 428
>TC88083 similar to GP|4587373|dbj|BAA76734.1 ethylene responsive element
binding factor {Nicotiana tabacum}, partial (46%)
Length = 1214
Score = 50.1 bits (118), Expect = 3e-06
Identities = 34/88 (38%), Positives = 47/88 (52%)
Frame = +1
Query: 245 ESAVPRKSVDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQTRKGRQVFVGGYDKE 304
E+A P KS T + YRGV + W GR+ A + D K +V++G YD
Sbjct: 109 EAAEPMKSSVTVKEIR--YRGVRKRPW-GRFAAEIRD--------PWKKTRVWLGTYDTA 255
Query: 305 EKAARAYDLAALKYWGTTTTTNFPISHY 332
E+AA AYD AA+K+ + TNFPI +
Sbjct: 256 EQAALAYDSAAIKFRASKAKTNFPIPEH 339
>TC79845 similar to GP|21554069|gb|AAM63150.1 ethylene responsive element
binding factor-like {Arabidopsis thaliana}, partial
(39%)
Length = 857
Score = 50.1 bits (118), Expect = 3e-06
Identities = 33/89 (37%), Positives = 48/89 (53%)
Frame = +1
Query: 241 TSVVESAVPRKSVDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQTRKGRQVFVGG 300
T++V S +K + + T YRGV R W G++ A + D S RKG +V++G
Sbjct: 301 TTMVSSKKVKKEEECVDE-TRRYRGVRRRPW-GKFAAEIRDPS-------RKGSRVWLGT 453
Query: 301 YDKEEKAARAYDLAALKYWGTTTTTNFPI 329
+D E AA+AYD AA + G NFP+
Sbjct: 454 FDCEIDAAKAYDSAAFRMRGQKAILNFPL 540
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.313 0.128 0.384
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,167,669
Number of Sequences: 36976
Number of extensions: 386627
Number of successful extensions: 3266
Number of sequences better than 10.0: 157
Number of HSP's better than 10.0 without gapping: 2640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3045
length of query: 660
length of database: 9,014,727
effective HSP length: 102
effective length of query: 558
effective length of database: 5,243,175
effective search space: 2925691650
effective search space used: 2925691650
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)
Medicago: description of AC147179.6