TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC147014.3 + phase: 0 
         (205 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

CA860074                                                               28  3.2
TC91462 similar to GP|7769858|gb|AAF69536.1| F12M16.20 {Arabidop...    27  5.4
TC86648 similar to PIR|A86408|A86408 FH protein interacting prot...    27  5.4
BE317368                                                               27  7.1
BF639611 similar to PIR|H96515|H96 hypothetical protein F16N3.18...    26  9.3

>CA860074 
          Length = 377

 Score = 27.7 bits (60), Expect = 3.2
 Identities = 17/69 (24%), Positives = 32/69 (45%)
 Frame = +1

Query: 20  PRILLGCCGSVAAMKFGLVFNAFSEWAEVRAVVTETSLQFLVHEKAESLFTHRHDIYKDD 79
           P+ILLGC  S+  +     ++ F        ++T  ++ FLV             I+++ 
Sbjct: 175 PQILLGCIASLIFLNLMPKYDDFVYLIRFIMIITFFAIMFLV-----------RFIFENG 321

Query: 80  SEWKNWKKI 88
           SE+ NW ++
Sbjct: 322 SEFVNWPRL 348


>TC91462 similar to GP|7769858|gb|AAF69536.1| F12M16.20 {Arabidopsis
           thaliana}, partial (21%)
          Length = 1134

 Score = 26.9 bits (58), Expect = 5.4
 Identities = 11/29 (37%), Positives = 19/29 (64%)
 Frame = -2

Query: 174 QHMPTNMREMADPSTIFSTVKSFYDSNIL 202
           QH+ T   +    +++F  ++S+YDSNIL
Sbjct: 449 QHVTTRACDFLHSASVFVYLESWYDSNIL 363


>TC86648 similar to PIR|A86408|A86408 FH protein interacting protein FIP1
           [imported] - Arabidopsis thaliana, partial (84%)
          Length = 1193

 Score = 26.9 bits (58), Expect = 5.4
 Identities = 24/98 (24%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
 Frame = -3

Query: 39  FNAFSEWAEVRAVVTETSLQFLVHEKAESLFTHRHDIYKDDSEWKNWKKIGDSVLHI--- 95
           F+  S  A ++  +   +   +VH+  +  F     I   D+ +K + ++G +   +   
Sbjct: 906 FSVQSVSARLQCFLNMFNSAVVVHKAHKPKFM----IVNGDNLYKFFSRVGFACGWVHCS 739

Query: 96  ELANWADIMVIAPLSAHTAAKIAGGLCDNLLTSIVRAW 133
           +L  W D ++IAPLS              L+TS+VR W
Sbjct: 738 QLMQWNDHLIIAPLS--------------LVTSLVRKW 667


>BE317368 
          Length = 621

 Score = 26.6 bits (57), Expect = 7.1
 Identities = 21/85 (24%), Positives = 34/85 (39%), Gaps = 2/85 (2%)
 Frame = +2

Query: 17  PRKPRILLGCCGS--VAAMKFGLVFNAFSEWAEVRAVVTETSLQFLVHEKAESLFTHRHD 74
           P   ++LL  CG       K G+ F    +W E+R      + +       +    +R D
Sbjct: 125 PISTKMLLNICGDEICKTRKPGIAFKN-KKWEEIRVEFNNRAKR----NHTQKQLKNRMD 289

Query: 75  IYKDDSEWKNWKKIGDSVLHIELAN 99
             + D  W  WK++     H+EL N
Sbjct: 290 SLRAD--WILWKQLMGKETHVELNN 358


>BF639611 similar to PIR|H96515|H96 hypothetical protein F16N3.18 [imported]
           - Arabidopsis thaliana, partial (19%)
          Length = 657

 Score = 26.2 bits (56), Expect = 9.3
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = +1

Query: 45  WAEVRAVVTETSLQFLVHEKAESLF 69
           WA VR  +  T LQFL+H +  SLF
Sbjct: 352 WALVRM*ILPTLLQFLMHMQRCSLF 426


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.321    0.133    0.413 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,832,318
Number of Sequences: 36976
Number of extensions: 92793
Number of successful extensions: 402
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 402
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 402
length of query: 205
length of database: 9,014,727
effective HSP length: 92
effective length of query: 113
effective length of database: 5,612,935
effective search space: 634261655
effective search space used: 634261655
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (26.2 bits)