Medicago
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC147013.3 + phase: 0 
         (380 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC84316 weakly similar to GP|11994612|dbj|BAB02749. gb|AAC24186....   615  e-176
TC89353 weakly similar to GP|9279704|dbj|BAB01261.1 gb|AAF25964....   267  6e-72
TC92509 weakly similar to PIR|T49129|T49129 hypothetical protein...   111  5e-25
AW696629                                                              102  2e-22
TC82156 similar to GP|20197985|gb|AAM15340.1 F-box protein famil...    97  8e-21
TC82343 similar to GP|10177628|dbj|BAB10775. gb|AAF30317.1~gene_...    96  2e-20
TC85359 weakly similar to PIR|C96592|C96592 hypothetical protein...    96  3e-20
TC84199 similar to GP|9294656|dbj|BAB03005.1 gb|AAF30317.1~gene_...    95  4e-20
CA921015 homologue to SP|Q8Y7G1|DPO3 DNA polymerase III polC-typ...    93  2e-19
TC81493 weakly similar to PIR|F86249|F86249 protein F25C20.23 [i...    91  6e-19
TC84924 weakly similar to PIR|F96545|F96545 hypothetical protein...    89  2e-18
BQ148450 similar to GP|10177464|dbj gb|AAD21700.1~gene_id:MQB2.1...    89  4e-18
TC84657 weakly similar to GP|9294656|dbj|BAB03005.1 gb|AAF30317....    87  1e-17
TC81326 weakly similar to PIR|T45651|T45651 hypothetical protein...    86  2e-17
TC91177 similar to GP|9294656|dbj|BAB03005.1 gb|AAF30317.1~gene_...    85  4e-17
TC81203 weakly similar to GP|10177464|dbj|BAB10855. gb|AAD21700....    84  7e-17
AW256529 homologue to GP|496669|emb|C C-169 protein {Saccharomyc...    78  6e-15
TC81783 similar to GP|9294656|dbj|BAB03005.1 gb|AAF30317.1~gene_...    52  1e-14
BF648955 similar to GP|18043667|gb| Unknown (protein for IMAGE:3...    75  4e-14
TC91947 similar to GP|8096410|dbj|BAA95880.1 hypothetical protei...    49  6e-14

>TC84316 weakly similar to GP|11994612|dbj|BAB02749.
           gb|AAC24186.1~gene_id:MGL6.4~strong similarity to
           unknown protein {Arabidopsis thaliana}, partial (10%)
          Length = 892

 Score =  615 bits (1585), Expect = e-176
 Identities = 294/296 (99%), Positives = 295/296 (99%)
 Frame = +3

Query: 14  PVAETTANKPLPFLPEELIVIILLRLPVRSLLRFKCVCKSWKTLFSDTHFANNHFLISTV 73
           PVAETTANKPLPFLPEELIVIILLRLPVRSLLRFKCVCKSWKTLFSDTHFANNHFLISTV
Sbjct: 3   PVAETTANKPLPFLPEELIVIILLRLPVRSLLRFKCVCKSWKTLFSDTHFANNHFLISTV 182

Query: 74  YPQLVACESVSAYRTWEIKTYPIESLLENSSTTVIPVSNTGHQRYTILGSCNGFLCLYDN 133
           YPQLVACESVSAYRTWEIKTYPIESLLENSSTTVIPVSNTGHQRYTILGSCNGFLCLYDN
Sbjct: 183 YPQLVACESVSAYRTWEIKTYPIESLLENSSTTVIPVSNTGHQRYTILGSCNGFLCLYDN 362

Query: 134 YQRCVRLWNPSINLKSKSSPTIDRFIYYGFGYDQVNHKYKLLAVKAFSRITETMIYTFGE 193
           YQRCVRLWNPSINLKSKSSPTIDRFIYYGFGYDQVNHKYKLLAVKAFSRITETMIYTFGE
Sbjct: 363 YQRCVRLWNPSINLKSKSSPTIDRFIYYGFGYDQVNHKYKLLAVKAFSRITETMIYTFGE 542

Query: 194 NSCKNVEVKDFPRYPPNRKHLGKFVSGTLNWIVDERDGRATILSFDIEKETYRQVLLPQH 253
           NSCKNVEVKDFPRYPPNRKHLGKFVSGTLNWIVDERDGRATILSFDIEKETYRQVLLPQH
Sbjct: 543 NSCKNVEVKDFPRYPPNRKHLGKFVSGTLNWIVDERDGRATILSFDIEKETYRQVLLPQH 722

Query: 254 GYAVYSPGLYVLSNCICVCTSFLDTRWQLWMMKKYGVAESWTKLMSIPHENLLISN 309
           GYAVYSPGLYVLSNCICVCTSFLDTRWQLWMMKKYGVAESWTKLMSIPHENL IS+
Sbjct: 723 GYAVYSPGLYVLSNCICVCTSFLDTRWQLWMMKKYGVAESWTKLMSIPHENLFISD 890


>TC89353 weakly similar to GP|9279704|dbj|BAB01261.1
           gb|AAF25964.1~gene_id:MYA6.2~similar to unknown protein
           {Arabidopsis thaliana}, partial (10%)
          Length = 1482

 Score =  267 bits (682), Expect = 6e-72
 Identities = 183/393 (46%), Positives = 229/393 (57%), Gaps = 21/393 (5%)
 Frame = +3

Query: 7   NNTDSTLPVAETTANKPLPFLPEELIVIILLRLPVRSLLRFKCVCKSWKTLFSDTHFANN 66
           N T  T  V+E TA+     +PEE+IV ILLRLPVRSLL+F+CVCK WKTL SD  FA  
Sbjct: 60  NVTVFTQSVSEITAD-----MPEEIIVEILLRLPVRSLLQFRCVCKLWKTLISDPQFAKK 224

Query: 67  HFLISTVYPQLVACESVSAYRTWEIKTYPIESLLENSSTTVIPVSN---TGHQRYTILGS 123
           H  IST YPQLV+     +     + +YP++ LL+N S   +  ++         TI+GS
Sbjct: 225 HVSISTAYPQLVSV--FVSIAKCNLVSYPLKPLLDNPSAHRVEPADFEMIHTTSMTIIGS 398

Query: 124 CNGFLCLYDNYQRCVRLWNPSINLKSKSSPTI--------DRFIYYGFGYDQVNHKYKLL 175
           CNG LCL D YQ    LWNPSI LKSK SPTI         RF+Y GFGYDQVN +YK+L
Sbjct: 399 CNGLLCLSDFYQ--FTLWNPSIKLKSKPSPTIIAFDSFDSKRFLYRGFGYDQVNDRYKVL 572

Query: 176 AVKAFS---RITETMIYTFGENSCKNVEVKDFPRYPP----NRKHLGKFVSGTLNWIVDE 228
           AV         T+T+IYTFG      ++   FP  P      R  +GKFVSG LNWIV +
Sbjct: 573 AVVQNCYNLDETKTLIYTFGGKDWTTIQ--KFPCDPSRCDLGRLGVGKFVSGNLNWIVSK 746

Query: 229 RDGRATILSFDIEKETYRQVLLPQHGYAVYSPGLYVLSNCICVCTSFLD-TRWQLWMMKK 287
           +     I+ FDIEKETY ++ LPQ  Y   +  LYV SN I V     + T W +WMMK+
Sbjct: 747 K----VIVFFDIEKETYGEMSLPQ-DYGDKNTVLYVSSNRIYVSFDHSNKTHWVVWMMKE 911

Query: 288 YGVAESWTKLMSIPHENLLISNISLWPCVEPLFISENGVVLLMNTSSSQLILYNLNSRG- 346
           YGV ESWTKLM IP + L  ++   +   + LFISE+G VLLM    S+L +YNLN+ G 
Sbjct: 912 YGVVESWTKLMIIPQDKL--TSPGPYCLSDALFISEHG-VLLMRPQHSKLSVYNLNNDGG 1082

Query: 347 -LYFPRIPPSYLNIYYIEPKLDLHIYHESLLSP 378
             Y   I   +           LHIY+ESL+SP
Sbjct: 1083LDYCTTISGQFARY--------LHIYNESLVSP 1157


>TC92509 weakly similar to PIR|T49129|T49129 hypothetical protein F26G5.80 -
           Arabidopsis thaliana, partial (8%)
          Length = 858

 Score =  111 bits (277), Expect = 5e-25
 Identities = 83/243 (34%), Positives = 124/243 (50%), Gaps = 20/243 (8%)
 Frame = +3

Query: 23  PLPFLPEELIVIILLRLPVRSLLRFKCVCKSWKTLFSDTHFANNHFLISTVYPQLVACES 82
           PLP LP EL+  IL RLPV+ L + +C+CKS+ +L SD  FA  H L S+  P  +   S
Sbjct: 162 PLPTLPFELVAEILCRLPVKLLXQLRCLCKSFNSLISDPKFAKKH-LHSSTTPHHLILRS 338

Query: 83  VSAYRTWEIKTYPIESLLENSSTTVIPVSNTGHQRYTILG----------SCNGFLCLYD 132
            +    + +   PI+S+L   ST+ +PV  T     T L           SC+G +CL  
Sbjct: 339 NNGSGRFALIVSPIQSVL---STSTVPVPQTQLTYPTCLTEEFASPYEWCSCDGIICLTT 509

Query: 133 NYQRCVRLWNPSINLKSKSSPTIDRF-------IYYGFGYDQVNHKYKLLAVKAFSRITE 185
           +Y   V LWNP IN K K+ P +            + FGYD     YK+ A+    + T 
Sbjct: 510 DYSSAV-LWNPFIN-KFKTLPPLKYISLKRSPSCLFTFGYDPFADNYKVFAITFCVKRTT 683

Query: 186 TMIYTFGENSCKNVEVKDFPRYP--PNRKHLGKFVSGTLNWIVDERDG-RATILSFDIEK 242
             ++T G +S + +E  DFP +   P+    G FV+G ++W+  +  G +  I+S D+E 
Sbjct: 684 VEVHTMGTSSWRRIE--DFPSWSFIPDS---GIFVAGYVHWLTYDGPGSQREIVSLDLED 848

Query: 243 ETY 245
           E+Y
Sbjct: 849 ESY 857


>AW696629 
          Length = 663

 Score =  102 bits (254), Expect = 2e-22
 Identities = 63/174 (36%), Positives = 91/174 (52%), Gaps = 12/174 (6%)
 Frame = +2

Query: 16  AETTANKPLPFLPEELIVIILLRLPVRSLLRFKCVCKSWKTLFSDTHFANNHFLISTVYP 75
           +E   + P P LP +LI+ IL  LPV+ L+RF  V K WK+L  D +FA  H   S    
Sbjct: 35  SEEATSSP-PILPSDLIMQILSWLPVKLLIRFTSVSKHWKSLILDPNFAKLHLQKSPKNT 211

Query: 76  QLVACESVSAYRTWEIKTYPIES-LLENSSTTVIPVSNTGHQRYTILGSCNGFLCL---- 130
            ++         TW +  YP+ S LLE SS +        +  Y I+GS NG +CL    
Sbjct: 212 HMILTALDDEDDTWVVTPYPVRSLLLEQSSFSDEECCCFDYHSYFIVGSTNGLVCLAVEK 391

Query: 131 ---YDNYQRCVRLWNPSINLKSKSSPTIDRFIY----YGFGYDQVNHKYKLLAV 177
                 Y+  ++ WNPS+ L+SK +P+++  +Y     GFGYD +N  YK +AV
Sbjct: 392 SLENRKYELFIKFWNPSLRLRSKKAPSLNIGLYGTARLGFGYDDLNDTYKAVAV 553


>TC82156 similar to GP|20197985|gb|AAM15340.1 F-box protein family  AtFBX9
           {Arabidopsis thaliana}, partial (4%)
          Length = 1136

 Score = 97.4 bits (241), Expect = 8e-21
 Identities = 76/234 (32%), Positives = 116/234 (49%), Gaps = 12/234 (5%)
 Frame = +3

Query: 48  KCVCKSWKTLFSDTHFANNHFLISTVYPQLVACESVSAYRTWEIKTYPIESLLENSSTTV 107
           K V KSWK+L SD++F   +  +ST   +L+  +       +   T  + SL+    T  
Sbjct: 459 KSVSKSWKSLISDSNFTKKNLRVSTTSHRLLFPKLTKGQYIFNACT--LSSLITTKGTAT 632

Query: 108 IPVSNTGHQRYT-ILGSCNGFLCLYDNYQRCVRLWNPSINLKSKSSPTID----RFIYYG 162
                   +++  I GSC+G LCL + +QR   LWNP IN K  S P ++      IY  
Sbjct: 633 AMQHPLNIRKFDKIRGSCHGILCL-ELHQRFAILWNPFIN-KYASLPPLEIPWSNTIYSC 806

Query: 163 FGYDQVNHKYKLLAVKAF---SRITETMIYTFGENSCKNVEVKDFPRYPPNRKHLGKFVS 219
           FGYD     YK+ A   +   S I +T ++T G  S + ++  DFP  P  +   GKFVS
Sbjct: 807 FGYDHSTDSYKVAAFIKWMPNSEIYKTYVHTMGTTSWRMIQ--DFPCTPYLKS--GKFVS 974

Query: 220 GTLNWIVDERD---GRATILSFDIEKETYRQVLLPQHGYA-VYSPGLYVLSNCI 269
            T NW+  +         ++S  +E E+Y ++L P +G   V S  L+VL +C+
Sbjct: 975 WTFNWLAYKDKYSVSSLLVVSLHLENESYGEILQPDYGSVDVLSISLWVLRDCL 1136


>TC82343 similar to GP|10177628|dbj|BAB10775.
           gb|AAF30317.1~gene_id:K6M13.17~similar to unknown
           protein {Arabidopsis thaliana}, partial (9%)
          Length = 666

 Score = 96.3 bits (238), Expect = 2e-20
 Identities = 57/160 (35%), Positives = 87/160 (53%), Gaps = 7/160 (4%)
 Frame = +2

Query: 25  PFLPEELIVIILLRLPVRSLLRFKCVCKSWKTLFSDTHFANNHFLISTVYPQLVACESVS 84
           P+LP+ELI  IL+RLPV+SL+RFK VCKSW +L SD HFAN+HF ++     L     + 
Sbjct: 59  PYLPDELITKILVRLPVKSLIRFKSVCKSWFSLISDNHFANSHFQVTAATHTL---RILF 229

Query: 85  AYRTWEIKTYPIESLLENSSTTVIPVS-NTGHQRY----TILGSCNGFLCLYDNYQRCVR 139
              T E +   ++SL  +     +P++ N     +     I  SC GF+ ++   +    
Sbjct: 230 LTATPEFRYIAVDSLFTDDYNEPVPLNPNFPLPEFEFDLEIKASCRGFIYVHTCSE--AY 403

Query: 140 LWNPSINLKSK--SSPTIDRFIYYGFGYDQVNHKYKLLAV 177
           +WNPS     +    P +   I+YGFGYD+    Y +++V
Sbjct: 404 IWNPSTGFLKQIPFPPNVSNLIFYGFGYDESTDDYLVVSV 523


>TC85359 weakly similar to PIR|C96592|C96592 hypothetical protein T7N22.2
           [imported] - Arabidopsis thaliana, partial (7%)
          Length = 1955

 Score = 95.5 bits (236), Expect = 3e-20
 Identities = 90/361 (24%), Positives = 147/361 (39%), Gaps = 72/361 (19%)
 Frame = +2

Query: 27  LPEELIVIILLRLPVRSLLRFKCVCKSWKTLFSDTHFAN--------------------- 65
           LP +L   ILL+LP++SLL  +CVCK W TL S+ HFA                      
Sbjct: 512 LPSQLTTHILLKLPIKSLLICRCVCKIWNTLISEPHFAKLQFERAPVSFVIRNLDNIGVS 691

Query: 66  ------------------NHFLISTVYPQLVACESVSAYRTWEIKTYPIESLLENSSTTV 107
                             NH  +  ++ +L  C+ +S+    + K Y +  + +  S   
Sbjct: 692 RNLYLLECEAEKFEIGSKNHVKLDPIF-ELPLCKDISSRDKNDAKFYKV--IKKKKSKIR 862

Query: 108 IPVSNTGHQRYTILGSCNGFLCLYD-NYQRCVRLWNP---SINLKSKSSPTIDRF----- 158
                +   ++ I+ SCNG LCL + +    + + NP      +  + + T D F     
Sbjct: 863 YFTLTSSRDKFGIVNSCNGLLCLSETSIGSPLVICNPVTREFTILPELTTTSDWFNRARA 1042

Query: 159 -IYYGFGYDQVNHKYKLLAV----------KAFSRITETMIYTFGENSCKNVEVKDFPRY 207
            +  GFG+    ++YK++ +            F R+    I+T G  S + VEV   P+ 
Sbjct: 1043RVQAGFGFQPKTNEYKVIIMWNKYVRRNNRLVFERVV-LEIHTLGTPSWRKVEVD--PQI 1213

Query: 208 PPNRKHLGKFVSGTLNWIVDERDGRATILSFDIEKETYRQVLLPQHGYAVYSPG------ 261
              +      V+G L+WI+ E   + +IL F+ E E  +    P H +  +  G      
Sbjct: 1214SFLKLLNPTCVNGALHWIIFETGQQKSILCFNFESERLQSFPSPPHVFGNHDNGFPLSMP 1393

Query: 262 --LYVLSNCICVCTSFLDTRWQLWMMKKYGVAESWTKLMSIPHENLLISNISL-----WP 314
             L  L   + +C         +W+M +YG+ ESWT + SI    LL+    L     W 
Sbjct: 1394IRLGELKGFLYICHISSLENVTMWVMNEYGIGESWTIVYSIDTSLLLMPGTCLGYPDPWR 1573

Query: 315 C 315
           C
Sbjct: 1574C 1576


>TC84199 similar to GP|9294656|dbj|BAB03005.1
           gb|AAF30317.1~gene_id:F14O13.6~similar to unknown
           protein {Arabidopsis thaliana}, partial (14%)
          Length = 673

 Score = 95.1 bits (235), Expect = 4e-20
 Identities = 64/166 (38%), Positives = 91/166 (54%), Gaps = 10/166 (6%)
 Frame = +1

Query: 22  KPLPFLPEELIVIILLRLPVRSLLRFKCVCKSWKTLFSDTHFANNHFLISTVYPQLVACE 81
           K  P+LP ELI+ ILL LPV+SLLRFKCVCKSW +L SDTHFAN+HF I+  + + V   
Sbjct: 94  KTAPYLPLELIIQILLWLPVKSLLRFKCVCKSWFSLISDTHFANSHFQITAKHSRRVLFM 273

Query: 82  SVSAYRTWEIKTYPIESLLENSSTTVIP------VSNTGHQRYTILGSCNGFLCLYDNYQ 135
                 T  +     E+L  +++ + IP      V        T   SC GF+ L+++  
Sbjct: 274 LNHVPTTLSL---DFEALHCDNAVSEIPNPIPNFVEPPCDSLDTNSSSCRGFIFLHNDPD 444

Query: 136 RCVRLWNPSINLKSK--SSPTIDRFIY--YGFGYDQVNHKYKLLAV 177
             + +WNPS  +  +   SP      +  YGFGYDQ+   Y +++V
Sbjct: 445 --LFIWNPSTRVYKQIPLSPNDSNSFHCLYGFGYDQLRDDYLVVSV 576


>CA921015 homologue to SP|Q8Y7G1|DPO3 DNA polymerase III polC-type (EC
           2.7.7.7) (PolIII). {Listeria monocytogenes}, partial
           (0%)
          Length = 824

 Score = 92.8 bits (229), Expect = 2e-19
 Identities = 72/223 (32%), Positives = 114/223 (50%), Gaps = 7/223 (3%)
 Frame = -1

Query: 163 FGYDQVNHKYKLLAVKAFSRITETMIYTFGENSCKNVEVKDFPRYPPNRKHLGKFVSGTL 222
           FGYD      +++ V   + ++   +YT G +  K +E       P N    G FVSGT+
Sbjct: 821 FGYDHFIDNIRVMFVLPKNEVS---VYTLGTDYWKRIE-----DIPYNIFEEGVFVSGTV 666

Query: 223 NWIVDERDGRATILSFDIEKETYRQVLLPQHGYAVYSPGLYVLSNCICVCTS---FLDTR 279
           NW+  +    + ILS D+EKE+Y+QVLLP     ++  G  VL NC+C+  +   FLD  
Sbjct: 665 NWLASDD---SFILSLDVEKESYQQVLLPDTENDLWILG--VLRNCLCILATSNLFLD-- 507

Query: 280 WQLWMMKKYGVAESWTKLMSIPHENLLISNISLWPCVEPLFISENGVVLL----MNTSSS 335
             +W+M +YG  ESWTKL S+P  N+    +  +     L+ SE+  +LL    M +   
Sbjct: 506 --VWIMNEYGNQESWTKLYSVP--NMQDHGLEAYTV---LYSSEDDQLLLEFNEMRSDKV 348

Query: 336 QLILYNLNSRGLYFPRIPPSYLNIYYIEPKLDLHIYHESLLSP 378
           +L++Y+  +  L  P    +Y        ++  + Y ESL+SP
Sbjct: 347 KLVVYDSKTGTLNIPEFQNNY-------DQICQNFYIESLISP 240


>TC81493 weakly similar to PIR|F86249|F86249 protein F25C20.23 [imported] -
           Arabidopsis thaliana, partial (9%)
          Length = 728

 Score = 91.3 bits (225), Expect = 6e-19
 Identities = 75/249 (30%), Positives = 114/249 (45%), Gaps = 24/249 (9%)
 Frame = +1

Query: 27  LPEELIVIILLRLPVRSLLRFKCVCKSWKTLFSDTHFANNHFLISTVYPQLVACESVSAY 86
           LP E+   IL R+P + LLR +  CK W+ L   T F   H  +S     ++     S  
Sbjct: 16  LPTEVTTEILSRVPAKPLLRLRSTCKWWRNLIDSTDFIFLH--LSKSRDSVIILRQHS-- 183

Query: 87  RTWEIKTYPIESLLENSSTTVIPVSNTGHQRYTILGSCNGFLCLYDNYQRCVRLWNPS-- 144
           R +E+    ++ + E     ++  SN    R  +LGSCNG LC+  N    +  WNP+  
Sbjct: 184 RLYELDLNSMDRVKE-LDHPLMCYSN----RIKVLGSCNGLLCIC-NIADDIAFWNPTIR 345

Query: 145 ----------INLKSKSSPTIDRFI---YYGFGYDQVNHKYKLLAVKAF------SRITE 185
                     I  ++  + TI   +    YGFGYD     YKL+++  F      S  + 
Sbjct: 346 KHRIIPSEPLIRKETNENNTITTLLAAHVYGFGYDSATDDYKLVSISNFVDLHNRSYDSH 525

Query: 186 TMIYTFGENSCKNVEVKDFPRYPPNRKHLGKFVSGTLNWIVD---ERDGRATILSFDIEK 242
             IYT G +    + +   P      + +G FVSG L+W+V    E D R  I++FD+  
Sbjct: 526 VTIYTMGSDVW--MPLPGVPYALCCARPMGVFVSGALHWVVPRALEPDSRDLIVAFDLRF 699

Query: 243 ETYRQVLLP 251
           E +R+V LP
Sbjct: 700 EVFREVALP 726


>TC84924 weakly similar to PIR|F96545|F96545 hypothetical protein F8A12.9
           [imported] - Arabidopsis thaliana, partial (9%)
          Length = 575

 Score = 89.4 bits (220), Expect = 2e-18
 Identities = 59/172 (34%), Positives = 94/172 (54%), Gaps = 9/172 (5%)
 Frame = +1

Query: 27  LPEELIVIILLRLPVRSLLRFKCVCKSWKTLFSDTHFANNHFLIS-TVYPQLVACESVSA 85
           LP+ELI+  LLRLPV+SLL FKC+CK W ++ SD HFAN+HF ++   + +   C S  +
Sbjct: 61  LPQELIIQFLLRLPVKSLLVFKCICKLWFSIISDPHFANSHFQLNHAKHTRRFLCISALS 240

Query: 86  YRTWEIKTYPIESLLENSSTTVIPVSN----TGHQRYTILGSCNGFLCLYDNYQRCVRLW 141
               EI++   ++ L ++  +  P  N      +  + I GSC GF+ +Y +    + +W
Sbjct: 241 P---EIRSIDFDAFLNDAPAS--PNFNCSLPDSYFPFEIKGSCRGFIFMYRHPN--IYIW 399

Query: 142 NPSINLKSK---SSPTIDRFI-YYGFGYDQVNHKYKLLAVKAFSRITETMIY 189
           NPS   K +   S+     +I  YGFGYDQ    Y ++ +   S I   +++
Sbjct: 400 NPSTGSKRQILMSAFNTKAYINLYGFGYDQSRDDYVVVFIVQ*SLIHSPLVF 555


>BQ148450 similar to GP|10177464|dbj gb|AAD21700.1~gene_id:MQB2.18~similar to
           unknown protein {Arabidopsis thaliana}, partial (9%)
          Length = 666

 Score = 88.6 bits (218), Expect = 4e-18
 Identities = 67/197 (34%), Positives = 100/197 (50%), Gaps = 18/197 (9%)
 Frame = +3

Query: 27  LPEELIVIILLRLPVRSLLRFKCVCKSWKTLFSDTHFANNHFLIS-TVYPQLVACESVSA 85
           LP E+ V IL RLPV+ L++F+CVCK WK+  S   F   H  +S T +  L+    +S 
Sbjct: 3   LPFEIQVEILSRLPVKYLMQFQCVCKLWKSQISKPDFVKKHLRVSNTRHLFLLTFSKLSP 182

Query: 86  YRTWEIKTYPIESLLENSSTTVIPVS---NTGHQRYTILGSCNGFLCLYDNYQRCVRLWN 142
                IK+YP+ S+    + T   +    N   +  +++GSC+G LC+  N    V LWN
Sbjct: 183 ELV--IKSYPLSSVFTEMTPTFTQLEYPLNNRDESDSMVGSCHGILCIQCNLSFPV-LWN 353

Query: 143 PSINLKSKSSPTID----RFI--YYGFGYDQVNHKYKLLAVKAFSRI--------TETMI 188
           PSI  K    P+ +    +FI   Y FGYD  +  YK++AV   S I        T   +
Sbjct: 354 PSIR-KFTKLPSFEFPQNKFINPTYAFGYDHSSDTYKVVAVFCTSNIDNGVYQLKTLVNV 530

Query: 189 YTFGENSCKNVEVKDFP 205
           +T G N  + ++  +FP
Sbjct: 531 HTMGTNCWRRIQT-EFP 578


>TC84657 weakly similar to GP|9294656|dbj|BAB03005.1
           gb|AAF30317.1~gene_id:F14O13.6~similar to unknown
           protein {Arabidopsis thaliana}, partial (14%)
          Length = 884

 Score = 86.7 bits (213), Expect = 1e-17
 Identities = 62/167 (37%), Positives = 89/167 (53%), Gaps = 15/167 (8%)
 Frame = +1

Query: 26  FLPEELIVIILLRLPVRSLLRFKCVCKSWKTLFSDTHFANNHFLIST-VYPQLVACESVS 84
           +LP ELI+ I+LRLPV+SL+RFKCVCKS   L SD +FA +HF +ST  +   +   S  
Sbjct: 325 YLPHELIIQIMLRLPVKSLIRFKCVCKSLLALISDHNFAKSHFELSTATHTNRIVFMSTL 504

Query: 85  AYRTWEIKTYPIESLLENSSTTVIPVSNTGHQRYT---ILGSCNGFLCLYDNYQRCVRLW 141
           A  T  I      SL ++S++T + ++    + Y+   I  SC GF+ L       + LW
Sbjct: 505 ALETRSIDFE--ASLNDDSASTSLNLNFMPPESYSSLEIKSSCRGFIVL--TCSSNIYLW 672

Query: 142 NPSI-----------NLKSKSSPTIDRFIYYGFGYDQVNHKYKLLAV 177
           NPS            NL +K S  +     YGFGYD +   Y +++V
Sbjct: 673 NPSTGHHKQIPFPASNLDAKYSCCL-----YGFGYDHLRDDYLVVSV 798


>TC81326 weakly similar to PIR|T45651|T45651 hypothetical protein F13I12.200
           - Arabidopsis thaliana, partial (12%)
          Length = 838

 Score = 85.9 bits (211), Expect = 2e-17
 Identities = 57/156 (36%), Positives = 79/156 (50%), Gaps = 7/156 (4%)
 Frame = +3

Query: 24  LPFLPEELIVIILLRLPVRSLLRFKCVCKSWKTLFSDTHFANNHFLISTVYPQLVACESV 83
           LP+LP ELI  ILLRLPV+SL RFK V KSW +L S  HFAN+HF +++          +
Sbjct: 159 LPYLPHELIFQILLRLPVKSLTRFKSVRKSWFSLISAPHFANSHFQLTSAKHAASRIMFI 338

Query: 84  SAYRTWEIKTYPIESLLENSSTTVIPVS---NTGHQRYTILGSCNGFLCLYDNYQRCVRL 140
           S   + E ++   ++ L +     + ++      H    I GSC GF+ LY      + +
Sbjct: 339 STL-SHETRSIDFKAFLNDDDPASLNITFSLTRSHFPVEIRGSCRGFILLYRPPD--IYI 509

Query: 141 WNPSINLKS--KSSPTIDRFI--YYGFGYDQVNHKY 172
           WNPS   K     SP   + +    GFGYDQ    Y
Sbjct: 510 WNPSTGFKKHIHLSPVDSKSVAQCQGFGYDQSRDDY 617


>TC91177 similar to GP|9294656|dbj|BAB03005.1
           gb|AAF30317.1~gene_id:F14O13.6~similar to unknown
           protein {Arabidopsis thaliana}, partial (9%)
          Length = 1298

 Score = 85.1 bits (209), Expect = 4e-17
 Identities = 92/369 (24%), Positives = 159/369 (42%), Gaps = 38/369 (10%)
 Frame = +2

Query: 47  FKCVCKSWKTLFSDTHFANNHFLISTV-----------YPQLVACE-SVSAYRTWEIKTY 94
           FKCVCK W +L S  HFAN+HF ++T            Y Q ++ +  +S      + T 
Sbjct: 74  FKCVCKLWLSLISQPHFANSHFQLTTATHTNRIMLITPYLQSLSIDLELSLNDDSAVYTT 253

Query: 95  PIESLLEN----SSTTVIPVSNTGHQRYTIL---GSCNGFLCLYDNYQRCVRLWNPSINL 147
            I  L+++    SS++      +  + + IL   GSC GF+ L      C+  WNPS   
Sbjct: 254 DISFLIDDEDYYSSSSSDMDDLSPPKSFFILDFKGSCRGFILLNCYSSLCI--WNPSTGF 427

Query: 148 KSKSSPTI-----DRFIYYGFGYDQVNHKYKLLAVK------AFSRITETMIYTFGENSC 196
             +   T      D   +YGFGYD+    Y ++++       +   ++   I++   N  
Sbjct: 428 HKRIPFTTIDSNPDANYFYGFGYDESTDDYLVISMSYEPSPSSDGMLSHLGIFSLRANVW 607

Query: 197 KNVEVKDFPRYPPNR--KHLGKFVSGTLNWIVDERD-GRATILSFDIEKETYRQVLLPQH 253
             VE  +   Y  N     +    +G ++W+    D     I++F + +    ++ LP  
Sbjct: 608 TRVEGGNLLLYSQNSLLNLVESLSNGAIHWLAFRNDISMPVIVAFHLMERKLLELRLPNE 787

Query: 254 GYAVYSPG----LYVLSNCICVCTSFLD-TRWQLWMMKKYGVAESWTKLMSIPHENLLIS 308
              +  P     L+V   C+ +     D   +Q+W+M+KY V  SWTK + +  +     
Sbjct: 788 --IINGPSRAYDLWVYRGCLALWHILPDRVTFQIWVMEKYNVQSSWTKTLVLSFDGNPAH 961

Query: 309 NISLWPCVEPLFISENGVVLLMNTSSSQLILYNLNSRGLYFPRIPPSYLNIYYIEPKLDL 368
             S W    P + +++G ++  N    +  L   N +G    +   SY +  Y+ P +  
Sbjct: 962 --SFW----PKYYTKSGDIVGRN---MRCALAKYNDKGQL--QEHHSYCDSQYVSPVV-- 1102

Query: 369 HIYHESLLS 377
            +Y ESLLS
Sbjct: 1103-MYTESLLS 1126



 Score = 33.5 bits (75), Expect = 0.14
 Identities = 18/55 (32%), Positives = 30/55 (53%)
 Frame = +3

Query: 26 FLPEELIVIILLRLPVRSLLRFKCVCKSWKTLFSDTHFANNHFLISTVYPQLVAC 80
          +LP ELI+ ILLRLPV+SL+R          L+ +     + F +  ++ ++  C
Sbjct: 12 YLPFELIIQILLRLPVKSLIRLNAFVSYGYLLYLNLTLQIHIFNLPPLHTRIELC 176


>TC81203 weakly similar to GP|10177464|dbj|BAB10855.
           gb|AAD21700.1~gene_id:MQB2.18~similar to unknown protein
           {Arabidopsis thaliana}, partial (9%)
          Length = 715

 Score = 84.3 bits (207), Expect = 7e-17
 Identities = 62/183 (33%), Positives = 86/183 (46%), Gaps = 27/183 (14%)
 Frame = +1

Query: 17  ETTANKPLPFLPEELIVIILLRLPVRSLLRFKCVCKSWKTLFS-DTHFANNHFLIS--TV 73
           ++    P   L +ELIV IL RLPV++L++FKCVCKSWKTL S D  FA  H   S    
Sbjct: 169 QSNGGAPTSLLLDELIVDILSRLPVKTLMQFKCVCKSWKTLISHDPSFAKLHLQRSPRNT 348

Query: 74  YPQLVACESVSAYRTWEIKTYPIESLLENSSTTVIP---------VSNTGHQRYT----- 119
           +  LV+  S      + +  +P+  L+E +  T+ P         V+      Y      
Sbjct: 349 HLTLVSDRSSDDESNFSVVPFPVSHLIE-APLTITPFEPYHLLRNVAIPDDPYYVLGNMD 525

Query: 120 ---ILGSCNGFLCL------YDNYQR-CVRLWNPSINLKSKSSPTIDRFIYYGFGYDQVN 169
              I+GSCNG  CL      Y+  +    R WNP+ N  S+    ++ F    FGYD  N
Sbjct: 526 CCIIIGSCNGLYCLRCYSLIYEEEEHDWFRFWNPATNTLSEELGCLNEFFRLTFGYDISN 705

Query: 170 HKY 172
             Y
Sbjct: 706 DTY 714


>AW256529 homologue to GP|496669|emb|C C-169 protein {Saccharomyces
           cerevisiae}, partial (7%)
          Length = 624

 Score = 77.8 bits (190), Expect = 6e-15
 Identities = 41/120 (34%), Positives = 68/120 (56%), Gaps = 7/120 (5%)
 Frame = +1

Query: 200 EVKDFPRYPPNRKHLGKFVSGTLNWI----VDERDGRATILSFDIEKETYRQVLLPQHGY 255
           +++DFP         G FVSGT+NW+    +D+ +   TI+S D+ KE Y+++  P +G 
Sbjct: 1   KIEDFPSLMIPYSQHGIFVSGTVNWLADYDLDDNNSLGTIVSLDLRKEIYQEISQPDYGD 180

Query: 256 AVYSPGLYVLSNCICVCTSFLDTRWQLWMMKKYGVAESWTKLMSIP---HENLLISNISL 312
                 L  +  C+CV  S  D+   +W+MK+YG  ESW KL+ IP   + +L+  N+++
Sbjct: 181 VTVKLSLGAMRECLCVF-SHSDSFDDVWLMKEYGNEESWIKLIRIPCISNRSLVFDNVNI 357


>TC81783 similar to GP|9294656|dbj|BAB03005.1
           gb|AAF30317.1~gene_id:F14O13.6~similar to unknown
           protein {Arabidopsis thaliana}, partial (6%)
          Length = 1225

 Score = 52.4 bits (124), Expect = 3e-07
 Identities = 24/55 (43%), Positives = 37/55 (66%)
 Frame = +2

Query: 24  LPFLPEELIVIILLRLPVRSLLRFKCVCKSWKTLFSDTHFANNHFLISTVYPQLV 78
           LP LP +L+  IL RLPV+ L++ +C+CK + +L SD +FA  HF  S  + +L+
Sbjct: 125 LPTLPFDLLPEILCRLPVKLLIQLRCLCKFFNSLISDPNFAKKHFQFSAKHHRLM 289



 Score = 45.1 bits (105), Expect(3) = 1e-14
 Identities = 31/94 (32%), Positives = 50/94 (52%), Gaps = 7/94 (7%)
 Frame = +2

Query: 264 VLSNCICVCTSFLDTRWQLWMMKKYGVAESWTKLMSIP---HENLLISNISLWPCVEPLF 320
           +L +C+CV  +  D  + +W+MK+YG  ESWTKL S+P   H       IS        +
Sbjct: 875 MLRDCLCVYEAS-DLFFNVWIMKEYGNQESWTKLYSVPKMQHRRFKAYTIS--------Y 1027

Query: 321 ISENGVVLL----MNTSSSQLILYNLNSRGLYFP 350
           I E+  +LL    M +S+++L +Y+  +  L  P
Sbjct: 1028IYEDDQLLLGIVDMQSSNTKLAVYDSKTGTLNIP 1129



 Score = 39.7 bits (91), Expect(3) = 1e-14
 Identities = 17/37 (45%), Positives = 25/37 (66%)
 Frame = +1

Query: 215 GKFVSGTLNWIVDERDGRATILSFDIEKETYRQVLLP 251
           G FV GT+NW+  +      ILS D+EKE+Y+++ LP
Sbjct: 715 GIFVGGTVNWMASDIADLLFILSLDLEKESYQKLFLP 825



 Score = 31.6 bits (70), Expect(3) = 1e-14
 Identities = 20/61 (32%), Positives = 27/61 (43%), Gaps = 4/61 (6%)
 Frame = +3

Query: 123 SCNGFLCLYDNYQRCVRLWNPSIN----LKSKSSPTIDRFIYYGFGYDQVNHKYKLLAVK 178
           SC+G  C   N   C  +WNPSI     L    +P         FGYD     YK++A+ 
Sbjct: 447 SCDGIFCGELNLGYCF-VWNPSIRKFKLLPPYKNPLEGDPFSISFGYDHFIDNYKVVAIS 623

Query: 179 A 179
           +
Sbjct: 624 S 626


>BF648955 similar to GP|18043667|gb| Unknown (protein for IMAGE:3661715) {Mus
           musculus}, partial (3%)
          Length = 514

 Score = 75.1 bits (183), Expect = 4e-14
 Identities = 54/152 (35%), Positives = 70/152 (45%), Gaps = 8/152 (5%)
 Frame = +3

Query: 26  FLPEELIVIILLRLPVRSLLRFKCVCKSWKTLFSDTHFANNHFLISTVYPQLVACESVSA 85
           FLP ELIV I+  LPV+ L++F+CV K +KTL SD +F   H   S   P L        
Sbjct: 54  FLPSELIVEIISWLPVKYLMQFRCVSKFYKTLISDPYFVQMHLEKSARNPHLALMWQDDL 233

Query: 86  YR-TWEIKTYPIESLLENSSTTVIPVSNTGHQRYTILGSCNGFLCLYD------NYQRCV 138
            R    I    +  LL N  TT  P  +       I+GSCNG LCL D       Y   +
Sbjct: 234 LREDGSIIFLSVSRLLGNKYTTP-PFQSGTFYHSCIIGSCNGLLCLVDFHCPDYYYYYYL 410

Query: 139 RLWNPSINLK-SKSSPTIDRFIYYGFGYDQVN 169
             WNP+   K      T+     + FGYD ++
Sbjct: 411 YFWNPATRTKFXNILITLSXDFKFSFGYDTLS 506


>TC91947 similar to GP|8096410|dbj|BAA95880.1 hypothetical protein {Oryza
          sativa (japonica cultivar-group)}, partial (6%)
          Length = 872

 Score = 49.3 bits (116), Expect(2) = 6e-14
 Identities = 29/66 (43%), Positives = 36/66 (53%), Gaps = 7/66 (10%)
 Frame = +1

Query: 30 ELIVIILLRLPVRSLLRFKCVCKSWKTLFSDTHFANNHFL-------ISTVYPQLVACES 82
          E+IV IL RLPVRS+L++K VCKSWKTL + T      F        I +   Q + C S
Sbjct: 16 EIIVEILSRLPVRSILQYKRVCKSWKTLLTSTAAYPRFFCSNGGRREIISYQTQSIHCSS 195

Query: 83 VSAYRT 88
             Y T
Sbjct: 196TPIYTT 213



 Score = 45.4 bits (106), Expect(2) = 6e-14
 Identities = 25/54 (46%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
 Frame = +2

Query: 128 LCLYDNYQRCVRLWNP----SINLKSKSSPTIDRFIYYGFGYDQVNHKYKLLAV 177
           LCLY      +RLWNP     I + SK     D   ++GFGYDQVN KYK+L +
Sbjct: 221 LCLYHKLLYNIRLWNPFY*IEIQIISK-----DCITHHGFGYDQVNDKYKVLYI 367



 Score = 38.9 bits (89), Expect = 0.003
 Identities = 35/111 (31%), Positives = 48/111 (42%), Gaps = 3/111 (2%)
 Frame = +3

Query: 143 PSINLKSKSSPTIDRFIYYGFGYDQVNHKYKLLAVKAFSRITETMIYTFGENSCKNVEVK 202
           PSI LKSK SP I            V+H   L+ +K    I    +       C N  + 
Sbjct: 267 PSIELKSKLSPKI------------VSHIMVLVMIKLTISIRCCTL-------CSNSGIG 389

Query: 203 DFPRYPPNRKHLGKFVSGTLNWIV---DERDGRATILSFDIEKETYRQVLL 250
               +       G +VSGTLNWI+        +  I+S D+EKETY +V +
Sbjct: 390 *DNSFEFPV*TSGIYVSGTLNWIIA*DGVNSNQLVIISVDLEKETYGEVFM 542


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.322    0.138    0.435 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,447,857
Number of Sequences: 36976
Number of extensions: 272814
Number of successful extensions: 1822
Number of sequences better than 10.0: 142
Number of HSP's better than 10.0 without gapping: 1728
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1757
length of query: 380
length of database: 9,014,727
effective HSP length: 98
effective length of query: 282
effective length of database: 5,391,079
effective search space: 1520284278
effective search space used: 1520284278
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)


Medicago: description of AC147013.3