BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC147012.13 + phase: 0 /pseudo
(459 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC82011 similar to GP|14423394|gb|AAK62379.1 Unknown protein {Ar... 302 2e-82
TC79449 weakly similar to GP|14423394|gb|AAK62379.1 Unknown prot... 273 8e-74
TC86057 similar to GP|15146330|gb|AAK83648.1 At1g44800/T12C22_7 ... 33 0.30
TC87320 weakly similar to SP|Q92DM1|PHOT_LISIN Blue-light photor... 31 1.1
TC89002 weakly similar to GP|12325088|gb|AAG52497.1 putative cho... 31 1.1
TC85775 similar to GP|21553460|gb|AAM62553.1 snap25a {Arabidopsi... 31 1.1
TC79934 similar to GP|20259633|gb|AAM14173.1 putative GAR1 prote... 31 1.1
TC86234 similar to SP|Q02758|ATPD_PEA ATP synthase delta chain ... 31 1.1
TC77096 similar to PIR|T05572|T05572 glucose-6-phosphate isomera... 27 1.3
TC90125 similar to GP|15982881|gb|AAL09787.1 AT3g53110/T4D2_40 {... 30 2.0
TC84516 similar to GP|17065882|emb|CAD12035. AtbZIP transcriptio... 30 2.5
BQ150123 similar to GP|21109992|gb| TonB-dependent receptor {Xan... 29 3.3
TC82946 weakly similar to GP|20160863|dbj|BAB89802. putative sub... 29 4.3
TC91362 weakly similar to GP|15524453|emb|CAC69349. unnamed prot... 28 5.7
BG449013 28 7.4
AW693735 weakly similar to GP|15290056|dbj putative glucosyltran... 28 7.4
BQ144062 weakly similar to SP|P03211|EBN1_ EBNA-1 nuclear protei... 28 7.4
AW688430 similar to GP|22535581|dbj contains EST AU182189(C63973... 28 7.4
TC89693 weakly similar to GP|21104633|dbj|BAB93225. hypothetical... 28 7.4
TC93623 weakly similar to GP|5668770|gb|AAD45997.1| T17H3.9 {Ara... 28 7.4
>TC82011 similar to GP|14423394|gb|AAK62379.1 Unknown protein {Arabidopsis
thaliana}, partial (4%)
Length = 684
Score = 302 bits (774), Expect = 2e-82
Identities = 148/148 (100%), Positives = 148/148 (100%)
Frame = +1
Query: 1 MAIITHLTGKRPHHWLSVDHNRPSPNSPTFKRQKLSTTMSNNTPPPLTTNATVFRISRYP 60
MAIITHLTGKRPHHWLSVDHNRPSPNSPTFKRQKLSTTMSNNTPPPLTTNATVFRISRYP
Sbjct: 241 MAIITHLTGKRPHHWLSVDHNRPSPNSPTFKRQKLSTTMSNNTPPPLTTNATVFRISRYP 420
Query: 61 KTKPPLRREIHAPCSSRPRKFDLSTNLKLTESSNLMASDTTDELMEKYEHAKHAALATIS 120
KTKPPLRREIHAPCSSRPRKFDLSTNLKLTESSNLMASDTTDELMEKYEHAKHAALATIS
Sbjct: 421 KTKPPLRREIHAPCSSRPRKFDLSTNLKLTESSNLMASDTTDELMEKYEHAKHAALATIS 600
Query: 121 FREKGKVKDNIKEVVVLKDSNVEDVEEF 148
FREKGKVKDNIKEVVVLKDSNVEDVEEF
Sbjct: 601 FREKGKVKDNIKEVVVLKDSNVEDVEEF 684
>TC79449 weakly similar to GP|14423394|gb|AAK62379.1 Unknown protein
{Arabidopsis thaliana}, partial (44%)
Length = 1486
Score = 273 bits (699), Expect = 8e-74
Identities = 166/333 (49%), Positives = 218/333 (64%), Gaps = 2/333 (0%)
Frame = +2
Query: 10 KRPHHWLSV--DHNRPSPNSPTFKRQKLSTTMSNNTPPPLTTNATVFRISRYPKTKPPLR 67
KR +SV +H S + P+ KR K S +T P T+NA V R+SRYP TKP
Sbjct: 179 KRSEECMSVLTNHTTISISQPSSKRPKFSY---QSTRPVSTSNAIVSRLSRYPDTKPQFL 349
Query: 68 REIHAPCSSRPRKFDLSTNLKLTESSNLMASDTTDELMEKYEHAKHAALATISFREKGKV 127
RE+HAPC RPRKF+LS KL+ + + D + L YE K +AL K ++
Sbjct: 350 REVHAPC--RPRKFNLSR--KLSNFGDFI--DMGNFLQRNYEKVKRSALG------KCRL 493
Query: 128 KDNIKEVVVLKDSNVEDVEEFLSVVKDHKLKENGLVCLDDKVEVVNGGIQQQSTSSMVDA 187
++VV+ DS+ ED ++ VV+ +++ D +++ V G+Q++ T S +
Sbjct: 494 VTQKEKVVIDLDSDGEDSDDS-GVVEVVEIR-------DTEMKDVEIGVQRRLTDSALTN 649
Query: 188 AKMLDNLSLSTKNDLSGVCAYKKLLEAVDKRGDTLGRLKFEIQLNEKRKSAFDLLRPKKE 247
A + N+ +DLS V YKKLL+ V +R DT+ L F+I+LNEKR+ F LLRPKKE
Sbjct: 650 AVV--NVE---DHDLSSVHVYKKLLQGVQRRTDTIQSLNFQIELNEKRRDIFQLLRPKKE 814
Query: 248 LVEEVPREPFVPLTKEEEVEVTRAFSANQNKVLVNHEKSNIEISGKMFRCLRPGEWLNDE 307
L+EEVP EPFVPLT +EE+EV+ AFS+N+ KVLV HE SNIE+SG+ RCL PG WLNDE
Sbjct: 815 LIEEVPFEPFVPLTDDEEIEVSCAFSSNRRKVLVAHESSNIEVSGEKMRCLLPGAWLNDE 994
Query: 308 VINLYLELLKERERREPQKFLKCHFFNTFFYKK 340
VINLYLELLKERERREP+KFLKCHFF+TFFYKK
Sbjct: 995 VINLYLELLKERERREPKKFLKCHFFSTFFYKK 1093
Score = 60.1 bits (144), Expect(2) = 5e-21
Identities = 45/101 (44%), Positives = 59/101 (57%), Gaps = 5/101 (4%)
Frame = +1
Query: 312 YLELLKERE-RREPQKFLKCHFFNTFFYKK----QECL*LQISEEMDYSKEIGIWPT*M* 366
++ + ERE + Q+ + FF F +K Q +*LQI +MD SKEIGI P *+*
Sbjct: 1003 FVPRVAEREGAKRTQEVSEMSFFQHLFLQKVNKWQG*I*LQICPKMDDSKEIGIQPI*L* 1182
Query: 367 *NICTYSPGDPLVLSCYQ*EGKEISVS*FTERN*HRSAGSA 407
*NICT+ + LVL YQ*+ +I VS* ERN A SA
Sbjct: 1183 *NICTHPQRNSLVLGSYQ*KRCKIPVS*LIERNGSSCARSA 1305
Score = 58.9 bits (141), Expect(2) = 5e-21
Identities = 24/31 (77%), Positives = 29/31 (93%)
Frame = +2
Query: 408 DEVKDKTGEDVDISSWETEFVEDLPEQMNGF 438
DEVKDKTG+D+D+S+WE E+VEDLPEQ NGF
Sbjct: 1322 DEVKDKTGKDIDVSTWEKEYVEDLPEQENGF 1414
>TC86057 similar to GP|15146330|gb|AAK83648.1 At1g44800/T12C22_7
{Arabidopsis thaliana}, partial (80%)
Length = 1476
Score = 32.7 bits (73), Expect = 0.30
Identities = 20/58 (34%), Positives = 31/58 (52%), Gaps = 1/58 (1%)
Frame = -1
Query: 283 HEKSNIEISGKMFRCLRPGEWLNDEVINLYLE-LLKERERREPQKFLKCHFFNTFFYK 339
H KSN + RC R L+ +V+ + ++ LKE + R PQK +CH + F +K
Sbjct: 492 HYKSNCWQNVNSGRCKRC*GVLHSQVVQILIKHWLKETKNR*PQKDRECHLWPNFSFK 319
>TC87320 weakly similar to SP|Q92DM1|PHOT_LISIN Blue-light photoreceptor
(Phototropin homolog). {Listeria innocua}, partial (11%)
Length = 1006
Score = 30.8 bits (68), Expect = 1.1
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = -1
Query: 3 IITHLTGKRPHHWLSVDHNRPSPNSPT--FKRQKLSTTMSNNT 43
I T+L P H + + HNR P + T F+R ST M+N+T
Sbjct: 856 IRTNLFPTTPKHKIMIHHNRTHPTTITL*FQRNLTSTKMNNST 728
>TC89002 weakly similar to GP|12325088|gb|AAG52497.1 putative chorismate
mutase; 16810-15349 {Arabidopsis thaliana}, partial
(42%)
Length = 1028
Score = 30.8 bits (68), Expect = 1.1
Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Frame = +1
Query: 179 QSTSSMVDAAKMLDNLSLSTKNDLSGVCAYKKLLEAVDKRGDTLGR-LKFEIQLNEKRKS 237
Q S+ +AA + + L + Y+ + E+V KR + R E+++NE
Sbjct: 499 QECPSVYEAA-----IKAKDRKRLLELLTYESVEESVQKRVEMKARTFSQEVKINEAGDV 663
Query: 238 AFDLLRPKKELVEEVPREPFVPLTKEEEVE 267
A + R K L+ + + +PLTKE +VE
Sbjct: 664 ADPVYRIKSGLIGNLYGKWIMPLTKEVQVE 753
>TC85775 similar to GP|21553460|gb|AAM62553.1 snap25a {Arabidopsis
thaliana}, partial (59%)
Length = 1380
Score = 30.8 bits (68), Expect = 1.1
Identities = 24/95 (25%), Positives = 45/95 (47%), Gaps = 9/95 (9%)
Frame = +1
Query: 63 KPPLR----REIHAPCSSRPRKFDLSTNLKLTESS---NLMASDTTDELMEKYEHAKHAA 115
K PL+ R H P S K D N+ ++S NL+ DT + + H++
Sbjct: 253 KSPLKDAKPRSKHNPFDSDEEKKDNRKNISSKKNSSQYNLVQRDTNTNPFDDVDARGHSS 432
Query: 116 LATI--SFREKGKVKDNIKEVVVLKDSNVEDVEEF 148
++ S+ + K++ ++ L+ +VED+EE+
Sbjct: 433 SSSYAPSYGNRNMYKNDFRDSGGLQSQSVEDLEEY 537
>TC79934 similar to GP|20259633|gb|AAM14173.1 putative GAR1 protein
{Arabidopsis thaliana}, partial (87%)
Length = 814
Score = 30.8 bits (68), Expect = 1.1
Identities = 20/90 (22%), Positives = 37/90 (40%)
Frame = -3
Query: 2 AIITHLTGKRPHHWLSVDHNRPSPNSPTFKRQKLSTTMSNNTPPPLTTNATVFRISRYPK 61
++++ +T W++V+ + S P+ + N PPP R + P
Sbjct: 287 SLVSFVTASPSQAWINVETSTTSEGGPSSRNPPPPPRPPPNRPPP--------RPRKPPP 132
Query: 62 TKPPLRREIHAPCSSRPRKFDLSTNLKLTE 91
++PPL P + PR L+ L + E
Sbjct: 131 SRPPLNPPSRPPLNPPPRPPPLAGGLIVWE 42
>TC86234 similar to SP|Q02758|ATPD_PEA ATP synthase delta chain chloroplast
precursor (EC 3.6.3.14). [Garden pea] {Pisum sativum},
partial (98%)
Length = 1131
Score = 30.8 bits (68), Expect = 1.1
Identities = 17/72 (23%), Positives = 35/72 (48%)
Frame = +1
Query: 23 PSPNSPTFKRQKLSTTMSNNTPPPLTTNATVFRISRYPKTKPPLRREIHAPCSSRPRKFD 82
P+P +P+ + ST N++P P + + ++S+ P L + S+ K
Sbjct: 475 PNPTTPSTPPLQTSTKSKNSSPTPRCSTISPAQLSKTPPNAISLLNSLLPLASNHTHKTS 654
Query: 83 LSTNLKLTESSN 94
+++ K TES++
Sbjct: 655 STSSSKPTESTS 690
>TC77096 similar to PIR|T05572|T05572 glucose-6-phosphate isomerase (EC
5.3.1.9) - Arabidopsis thaliana, partial (89%)
Length = 2494
Score = 26.9 bits (58), Expect(2) = 1.3
Identities = 17/43 (39%), Positives = 19/43 (43%)
Frame = +1
Query: 37 TTMSNNTPPPLTTNATVFRISRYPKTKPPLRREIHAPCSSRPR 79
TT S P P T + R +R LR IH P SSR R
Sbjct: 286 TTTSPYIPNPTQTPSNPLRRTRNSNRNRSLRCAIHKPPSSRER 414
Score = 21.9 bits (45), Expect(2) = 1.3
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = +2
Query: 101 TDELMEKYEHAKHAALATISFREKGKVKDNIKEVVV----LKDSN 141
TDE +++ E AAL + EKG + + + +V L+DSN
Sbjct: 503 TDEFVKEMEPRFQAALKAMEELEKGAIANPDEGRMVGHYWLRDSN 637
>TC90125 similar to GP|15982881|gb|AAL09787.1 AT3g53110/T4D2_40
{Arabidopsis thaliana}, partial (33%)
Length = 832
Score = 30.0 bits (66), Expect = 2.0
Identities = 19/66 (28%), Positives = 28/66 (41%), Gaps = 4/66 (6%)
Frame = +1
Query: 15 WLSVDHNRPSPNSPTFKRQKLSTTMSNNTPPP----LTTNATVFRISRYPKTKPPLRREI 70
+ S H R SP+S T + +++ N PPP L A + + P PP
Sbjct: 22 YYSNTHRRTSPSSVTLTHRSFNSSPCQNLPPPLLHRLQPKAGPIKPMKKPIKPPPPPPTK 201
Query: 71 HAPCSS 76
H P +S
Sbjct: 202HLPSTS 219
>TC84516 similar to GP|17065882|emb|CAD12035. AtbZIP transcription factor
{Arabidopsis thaliana}, partial (18%)
Length = 623
Score = 29.6 bits (65), Expect = 2.5
Identities = 27/102 (26%), Positives = 42/102 (40%), Gaps = 7/102 (6%)
Frame = +2
Query: 14 HWLSVDHNRPSPNSPTFKRQKLSTTMSNNTPPPLTTNATVFRISRYPKTK--PPLRREIH 71
H + H +PN P + + + PPP T AT + S +P+T P R H
Sbjct: 47 HS*QMQHQSSNPN-PNSNPNRHNASQLPPPPPPSTAAATTAKPSLFPRTTNVPSHHRRAH 223
Query: 72 APCSSR--PRKFDLSTNLKLTESSNLMASD---TTDELMEKY 108
+ + R DLS + T S+ + D + D+L Y
Sbjct: 224 SDLTFRLPDDMMDLSPSDPFTGGSSTASLDEIGSEDDLFSTY 349
>BQ150123 similar to GP|21109992|gb| TonB-dependent receptor {Xanthomonas
axonopodis pv. citri str. 306}, partial (2%)
Length = 1131
Score = 29.3 bits (64), Expect = 3.3
Identities = 24/88 (27%), Positives = 33/88 (37%)
Frame = +2
Query: 31 KRQKLSTTMSNNTPPPLTTNATVFRISRYPKTKPPLRREIHAPCSSRPRKFDLSTNLKLT 90
KR + +T P P T+ T R P++ P R SS P + T
Sbjct: 182 KRMEQKSTKKREQPGP-RTHGTPPRPD--PRSAAPQRNSAEKSRSSSPHQQQTPTQGGRN 352
Query: 91 ESSNLMASDTTDELMEKYEHAKHAALAT 118
++ A DTT + Y H K A T
Sbjct: 353 RATRARAKDTTARADQTYAHVKRATRYT 436
>TC82946 weakly similar to GP|20160863|dbj|BAB89802. putative
subtilisin-like protease {Oryza sativa (japonica
cultivar-group)}, partial (21%)
Length = 921
Score = 28.9 bits (63), Expect = 4.3
Identities = 17/58 (29%), Positives = 32/58 (54%)
Frame = +3
Query: 86 NLKLTESSNLMASDTTDELMEKYEHAKHAALATISFREKGKVKDNIKEVVVLKDSNVE 143
N +LT SSN + S + +L+ Y H + A +S +E +K + + +KDS+++
Sbjct: 156 NPQLTTSSNNLNSLFSSKLIYTYTHVMNGFSANLSPKEHESLKTSPGYISSIKDSHMK 329
>TC91362 weakly similar to GP|15524453|emb|CAC69349. unnamed protein product
{Glycine max}, partial (64%)
Length = 611
Score = 28.5 bits (62), Expect = 5.7
Identities = 20/81 (24%), Positives = 37/81 (44%)
Frame = +1
Query: 12 PHHWLSVDHNRPSPNSPTFKRQKLSTTMSNNTPPPLTTNATVFRISRYPKTKPPLRREIH 71
P++ L + + P +P+ + LS M N T AT+ +I + KT PP ++
Sbjct: 139 PNYALCIQYLNSDPKAPSADIRGLSLIMVNVIKTKAT--ATLNKIRQLLKTSPPSQKGAL 312
Query: 72 APCSSRPRKFDLSTNLKLTES 92
C S+ ++ + TE+
Sbjct: 313 TSCESKYNTIIVADVAEATEA 375
>BG449013
Length = 527
Score = 28.1 bits (61), Expect = 7.4
Identities = 10/13 (76%), Positives = 11/13 (83%)
Frame = -2
Query: 372 YSPGDPLVLSCYQ 384
Y P DPL+LSCYQ
Sbjct: 421 YYPSDPLILSCYQ 383
>AW693735 weakly similar to GP|15290056|dbj putative glucosyltransferase IS5a
salicylate-induced {Oryza sativa (japonica
cultivar-group)}, partial (7%)
Length = 591
Score = 28.1 bits (61), Expect = 7.4
Identities = 21/78 (26%), Positives = 31/78 (38%), Gaps = 6/78 (7%)
Frame = +2
Query: 25 PNSPTFKRQKLSTTMSNNTPPPLTTNATVFRISRYPKTKPPLRREIHAPCSSRP------ 78
PN + S + +PP +T+ T P T PP R CSS
Sbjct: 191 PNLSPLSIRSSSAFTPSTSPPSKSTSPTELNHCPPPMTLPPWPRYAKVQCSSMNPLENLW 370
Query: 79 RKFDLSTNLKLTESSNLM 96
R+ +L+T+L + LM
Sbjct: 371 RRMNLTTSLPTVYTLGLM 424
>BQ144062 weakly similar to SP|P03211|EBN1_ EBNA-1 nuclear protein. [strain
B95-8 Human herpesvirus 4] {Epstein-barr virus},
partial (8%)
Length = 1390
Score = 28.1 bits (61), Expect = 7.4
Identities = 19/57 (33%), Positives = 23/57 (40%)
Frame = -1
Query: 22 RPSPNSPTFKRQKLSTTMSNNTPPPLTTNATVFRISRYPKTKPPLRREIHAPCSSRP 78
RP P R PPP ++AT FR+ P T P RRE P + P
Sbjct: 724 RPRPRRRHRARSPPPPRSPCGPPPPKRSSATSFRLPPPPST--PARREALLPRADSP 560
>AW688430 similar to GP|22535581|dbj contains EST AU182189(C63973)~similar to
Arabidopsis thaliana chromosome5 At5g65910~unknown,
partial (2%)
Length = 674
Score = 28.1 bits (61), Expect = 7.4
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 21 NRPSPNSPTFKRQKLSTTMSNNTPPPLTTNATVFR 55
N ++P F L + + + PPPLTT T+FR
Sbjct: 486 NSGKQSTPRFNLLLLMSMIHWSLPPPLTTTVTLFR 590
>TC89693 weakly similar to GP|21104633|dbj|BAB93225. hypothetical
protein~similar to Arabidopsis thaliana chromosome 3
At3g46550, partial (53%)
Length = 1346
Score = 28.1 bits (61), Expect = 7.4
Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Frame = +3
Query: 7 LTGKRPHHWLSVDHNRPSPNSPTFKRQKLSTTMSNNTPPPLTTNATVFRISRYPKTKPPL 66
L+ +RP H + H+RPSP P R + + + P PL P T P L
Sbjct: 216 LSPRRPQH---LSHHRPSPP*PLPLRPRRHPPLPHPPPIPLLVR---------PPTPPSL 359
Query: 67 R-REIHAPCSSRPR 79
R H+ + RPR
Sbjct: 360 R*TRHHSLPNHRPR 401
>TC93623 weakly similar to GP|5668770|gb|AAD45997.1| T17H3.9 {Arabidopsis
thaliana}, partial (13%)
Length = 744
Score = 28.1 bits (61), Expect = 7.4
Identities = 21/84 (25%), Positives = 34/84 (40%)
Frame = +2
Query: 11 RPHHWLSVDHNRPSPNSPTFKRQKLSTTMSNNTPPPLTTNATVFRISRYPKTKPPLRREI 70
+P H + H RPSP SP ++Q ++ P +++ R PL R
Sbjct: 173 QPIHGRTTTHQRPSPLSPRRRQQPRRHLRQDHFPQTSQRPSSLHR---------PLSRCR 325
Query: 71 HAPCSSRPRKFDLSTNLKLTESSN 94
P S R F ++ ++ S N
Sbjct: 326 PFPLSPRTSVFSSTSRSQIAHSDN 397
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.324 0.138 0.410
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,154,872
Number of Sequences: 36976
Number of extensions: 182492
Number of successful extensions: 1482
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 1460
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1474
length of query: 459
length of database: 9,014,727
effective HSP length: 99
effective length of query: 360
effective length of database: 5,354,103
effective search space: 1927477080
effective search space used: 1927477080
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 60 (27.7 bits)
Medicago: description of AC147012.13