BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC147010.10 - phase: 1
(150 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ500818 weakly similar to GP|10435304|dbj unnamed protein produ... 44 2e-05
BQ137234 similar to EGAD|35719|3709 hypothetical protein {Burkho... 42 9e-05
AW585567 38 0.001
BQ150123 similar to GP|21109992|gb| TonB-dependent receptor {Xan... 38 0.002
BQ137346 homologue to GP|15027095|em hypothetical protein LT.09 ... 38 0.002
BQ137255 homologue to PIR|B34768|B347 ORF5 protein - Orf virus (... 37 0.002
TC85442 similar to GP|13543783|gb|AAH06040.1 Unknown (protein fo... 37 0.004
TC78386 similar to SP|Q9NZW4|DSPP_HUMAN Dentin sialophosphoprote... 36 0.005
BQ151366 similar to GP|20146300|dbj hypothetical protein~similar... 36 0.007
BQ137236 weakly similar to GP|19070096|emb UL49 tegument protein... 36 0.007
TC83053 homologue to GP|15705932|gb|AAL05884.1 transcriptional a... 35 0.009
TC91508 weakly similar to SP|P52162|MAX_CHICK MAX protein. [Chic... 35 0.011
BQ137254 similar to GP|22946423|gb| CG31813-PA {Drosophila melan... 35 0.011
BQ137243 similar to GP|2624970|gb|A proline-rich protein 9-1 {Mu... 35 0.015
AW559848 homologue to GP|21592490|gb| unknown {Arabidopsis thali... 34 0.020
BQ137626 homologue to PIR|S67655|S67 probable membrane protein Y... 34 0.026
BQ137242 similar to GP|9800281|gb|A pR69 {rat cytomegalovirus Ma... 34 0.026
BF646398 similar to GP|14028993|gb Putative U1 small nuclear rib... 33 0.044
TC81816 similar to GP|8096269|dbj|BAA95789.1 KED {Nicotiana taba... 33 0.044
BQ150994 similar to GP|22122173|dbj preproneuropeptide B {Homo s... 33 0.057
>AJ500818 weakly similar to GP|10435304|dbj unnamed protein product {Homo
sapiens}, partial (12%)
Length = 457
Score = 43.9 bits (102), Expect = 2e-05
Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 6/99 (6%)
Frame = -1
Query: 30 HRIDSTAIQSANSSPEVKNSSTDHGGRRRRQTGSAQRKEKKTEPKQHASKQHASKR---- 85
H + S +++P+ K+ T + R+ + K+ K++ K++A KR
Sbjct: 352 HMVTSVTHMVTSATPKQKHMVTSVMPTQ*RRNDKRRNARKRNARKRNVRKRNARKRNARK 173
Query: 86 --ARKQRARKQRARKQRARNKNVKSVKNAKNTKQQRQAK 122
RK+ ARK+ ARK+ AR +NV+ K ++R K
Sbjct: 172 RNVRKRNARKRNARKRNARKRNVRKRNVRKRNVRKRNVK 56
Score = 39.7 bits (91), Expect = 5e-04
Identities = 26/104 (25%), Positives = 51/104 (49%), Gaps = 1/104 (0%)
Frame = -1
Query: 26 TNLHHRIDSTAIQSANSSPEVKNSSTDHGGRRRRQTGSAQRKEKKTEPKQHASKQHASKR 85
T++ H + S + + V + T +++ S T+ +++ +++A KR
Sbjct: 397 TSVTHMVTSATPKQMHMVTSVTHMVTSATPKQKHMVTSVM----PTQ*RRNDKRRNARKR 230
Query: 86 -ARKQRARKQRARKQRARNKNVKSVKNAKNTKQQRQAKSHRDRE 128
ARK+ RK+ ARK+ AR +NV+ K ++R A+ R+
Sbjct: 229 NARKRNVRKRNARKRNARKRNVRKRNARKRNARKRNARKRNVRK 98
Score = 29.6 bits (65), Expect = 0.48
Identities = 13/45 (28%), Positives = 24/45 (52%)
Frame = -1
Query: 87 RKQRARKQRARKQRARNKNVKSVKNAKNTKQQRQAKSHRDREVTA 131
+++ ARK+ ARK+ R +N + K ++R A+ R+ A
Sbjct: 253 KRRNARKRNARKRNVRKRNARKRNARKRNVRKRNARKRNARKRNA 119
>BQ137234 similar to EGAD|35719|3709 hypothetical protein {Burkholderia
cepacia}, partial (6%)
Length = 1184
Score = 42.0 bits (97), Expect = 9e-05
Identities = 31/137 (22%), Positives = 59/137 (42%), Gaps = 9/137 (6%)
Frame = +3
Query: 1 QRKQIHQEHKNQKTENSSEILRDSCTNLHHRIDSTAIQSAN---SSPEVKNSSTDHGGRR 57
+R + H++ + E ++ T H + ++ + + T H RR
Sbjct: 423 RRARPHEQEAEKTNAQRRERQKEQTTTEKHEHSTQHTETRDHKSAGARASRDRTSHQQRR 602
Query: 58 RRQTGSA---QRKEKKTEPK---QHASKQHASKRARKQRARKQRARKQRARNKNVKSVKN 111
RQ G QRK+K T + +HA + + R + R + R++R R++ +S +
Sbjct: 603 *RQHGRGKKNQRKDKATRRRARTRHAEARRTTHAPRSEETRGRARRRERQRDRG-QSRSH 779
Query: 112 AKNTKQQRQAKSHRDRE 128
+ K + Q + HR RE
Sbjct: 780 RRRQKDETQEQEHRQRE 830
Score = 38.1 bits (87), Expect = 0.001
Identities = 18/90 (20%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Frame = +1
Query: 38 QSANSSPEVKNSSTDHGGRRRRQTGSAQRKEKKTEPKQHASK-QHASKRARKQRARKQRA 96
+ A+ P K + G +RR +RKE + +PK K +++ +KQ R++
Sbjct: 205 RGADRPPNRKGEARRAGRNKRRSQRQKERKENERKPKTKQKKGGEETRKKKKQPQRRRGE 384
Query: 97 RKQRARNKNVKSVKNAKNTKQQRQAKSHRD 126
R+++ + + + T ++++ ++H++
Sbjct: 385 REEKGEGEEARKREGPGRTNRKQKRRTHKE 474
Score = 35.0 bits (79), Expect = 0.011
Identities = 20/89 (22%), Positives = 37/89 (41%), Gaps = 2/89 (2%)
Frame = +3
Query: 38 QSANSSPEVKNSSTDHGGRRRRQTGSAQ--RKEKKTEPKQHASKQHASKRARKQRARKQR 95
+ + PE K + + + + +KEKKT PK+ ++ +R R R+ R
Sbjct: 255 EKQEAEPEAKRKKRERTKTKNKAKKGRRGNKKEKKTTPKETGRERREGRRRRSTEERRAR 434
Query: 96 ARKQRARNKNVKSVKNAKNTKQQRQAKSH 124
+Q A N + + K+Q + H
Sbjct: 435 PHEQEAEKTN---AQRRERQKEQTTTEKH 512
Score = 34.3 bits (77), Expect = 0.020
Identities = 28/128 (21%), Positives = 48/128 (36%), Gaps = 9/128 (7%)
Frame = +3
Query: 1 QRKQIHQEHKNQKTENSSEILRDSCTNLHHRIDSTA----IQSANSSPEVKNSSTDHG-- 54
Q+++ Q + +K + + R H T + + D G
Sbjct: 591 QQRR*RQHGRGKKNQRKDKATRRRARTRHAEARRTTHAPRSEETRGRARRRERQRDRGQS 770
Query: 55 -GRRRRQTGSAQRKEKKTEPKQHASKQHASKRARKQRARKQR--ARKQRARNKNVKSVKN 111
RRRQ Q +E + + S +RA + ARK R AR++RAR +
Sbjct: 771 RSHRRRQKDETQEQEHRQREPRKRSSTSTRERAHARTARKARGAARRRRARTHGQERAHE 950
Query: 112 AKNTKQQR 119
+ T ++R
Sbjct: 951 QQKTSERR 974
Score = 32.7 bits (73), Expect = 0.057
Identities = 31/147 (21%), Positives = 57/147 (38%), Gaps = 23/147 (15%)
Frame = +1
Query: 2 RKQIHQEHKNQKTENSSEILRDSCTNLHHRIDSTAIQSANSSPEVKNSSTDHGGRRRRQT 61
RKQ + HK + + S + R + T + + T A E +++ G T
Sbjct: 445 RKQKRRTHKEESGKKSKQQQRSTSTAHNTQKRETTRAPARERAETARVTSNAGD---DST 615
Query: 62 GSAQRKEKKT----------------EPKQHASKQHASKRARKQ-------RARKQRARK 98
G+A+R +KT +P +++H +R ++ RA +K
Sbjct: 616 GAAKRIREKTRRRAAERGRDTPRHDGQPTHREARRHVGERGEERDNETEGSRAATDADKK 795
Query: 99 QRARNKNVKSVKNAKNTKQQRQAKSHR 125
R R+KN A+ R+++ R
Sbjct: 796 TRRRSKNTGRENRAREAAPARESERTR 876
>AW585567
Length = 491
Score = 38.1 bits (87), Expect = 0.001
Identities = 36/104 (34%), Positives = 50/104 (47%), Gaps = 8/104 (7%)
Frame = +1
Query: 10 KNQKTENSS---EILRDSCTNLHHRIDSTAIQSANSSPEVKNSSTDHGGRRRRQTGSAQR 66
+NQ NSS ILRDS N HHRI S AI P + R R+ S +R
Sbjct: 184 QNQIHPNSSFFSVILRDSFANRHHRIKSFAI------PVRIHHHWRRIQARSRRIRSLRR 345
Query: 67 KEKKT--EPKQHASKQHA---SKRARKQRARKQRARKQRARNKN 105
+EK+T EP + +QH +AR Q+A + + R+K+
Sbjct: 346 REKETEFEPVKKKKEQHRFIFGFKARNQQAEPDSSVSEDLRSKS 477
>BQ150123 similar to GP|21109992|gb| TonB-dependent receptor {Xanthomonas
axonopodis pv. citri str. 306}, partial (2%)
Length = 1131
Score = 37.7 bits (86), Expect = 0.002
Identities = 30/101 (29%), Positives = 47/101 (45%), Gaps = 1/101 (0%)
Frame = +2
Query: 22 RDSCTNLHHRIDSTAIQSANSSPEVKNSSTDHGGRRRRQTGSAQRKEKKTEPKQHASKQH 81
RD+ T H + ST + V+ S G R GSA+ E K + H
Sbjct: 596 RDAVT--HSKPHSTRAE*DEREDTVRRS----G*SGRETNGSAESDEHTRRDKSSKTTDH 757
Query: 82 ASKRARKQRARKQRARKQRARN-KNVKSVKNAKNTKQQRQA 121
+RAR++ +R+QRA +R R K ++ AK T+++ A
Sbjct: 758 KRRRARRRASRRQRAPPRRGRRAKGSRTADKAK*TERRDDA 880
Score = 29.3 bits (64), Expect = 0.63
Identities = 31/134 (23%), Positives = 50/134 (37%), Gaps = 8/134 (5%)
Frame = +3
Query: 3 KQIHQEHKNQKTENSSEILRDSC----TNLHHRIDSTAIQSANSSPEVKNSSTDHGGRRR 58
+Q K QK ENS + R T R TA +S ++ N GG
Sbjct: 177 RQNEWNKKVQKNENSRDRERTERPPDPTPAAPRHKETAQKSLEAAARTNNRHPHKGGG-- 350
Query: 59 RQTGSAQRKEKKTEPKQHASKQHASKRARKQRARKQRARKQRARNKNVKSVKNAKNTK-- 116
TEP++H + ++ R+ R R + R VKS + T
Sbjct: 351 ------------TEPREHEQRTRQHEQTRRTRM*NGRHAIRVTRRSRVKSTQQHGETHRA 494
Query: 117 --QQRQAKSHRDRE 128
++R+ + R++E
Sbjct: 495 QCRERERRGEREKE 536
Score = 28.1 bits (61), Expect = 1.4
Identities = 19/88 (21%), Positives = 44/88 (49%), Gaps = 1/88 (1%)
Frame = +3
Query: 18 SEILRDSCTNLHHRIDSTAIQSANSSPEVKNSSTDHGGRRRRQTGSAQRKEKK-TEPKQH 76
SE ++ + HHR SA+ N++T+ + + + +K+ EP+
Sbjct: 855 SEQNEETTQHAHHR----GRDSADRHDAQANTATNEAKKSTDSDAAQE*PDKRGAEPRTA 1022
Query: 77 ASKQHASKRARKQRARKQRARKQRARNK 104
A++++ K A + + +++ R+ RAR++
Sbjct: 1023ANEEYEQKDA*ETKTKRRVGRRARARSQ 1106
>BQ137346 homologue to GP|15027095|em hypothetical protein LT.09 {Leishmania
major}, partial (0%)
Length = 1101
Score = 37.7 bits (86), Expect = 0.002
Identities = 37/153 (24%), Positives = 56/153 (36%), Gaps = 32/153 (20%)
Frame = +2
Query: 4 QIHQEHKNQKTENSSEILRDSCTNLHHRIDSTAIQSANSS-------------------- 43
+ H E N+KT R + N H+ TA + +
Sbjct: 650 ETHNEETNEKTRARGSTHRRNHANHTHKNAQTATAETDEARTRTSTSTRREEKSNRAK*E 829
Query: 44 PEVKNSSTDHGGRRRRQTGSAQRKEKKTEPKQHASKQHASKRARKQRARKQRARKQ---- 99
E + T HG RR+ T S R P QH A KR +++ R RA Q
Sbjct: 830 RERRKHETTHGDARRQTTDSRAR-----APAQHKRDNEAPKRQERRKTRNTRAHAQTHHD 994
Query: 100 ---RARNKNVKSVKN-AKNTK----QQRQAKSH 124
R R +N ++ + A+ T+ +RQ + H
Sbjct: 995 THRRPRRENTEAATHPARRTRGRAENERQKRPH 1093
>BQ137255 homologue to PIR|B34768|B347 ORF5 protein - Orf virus (strain NZ2),
partial (10%)
Length = 1161
Score = 37.4 bits (85), Expect = 0.002
Identities = 34/139 (24%), Positives = 62/139 (44%), Gaps = 20/139 (14%)
Frame = +1
Query: 1 QRKQIHQEHKNQKTENSSEILR-DSCTNLHHRIDSTAIQSANSSPEVKNSSTDHGGRRRR 59
+R + + QKT+++ DS + R + SA + E + +TD G RR
Sbjct: 580 RRARARKSSAEQKTDDARATTPPDSAADAARRARAKRTDSARDARERR--ATDDGQRRDA 753
Query: 60 QTGSAQRKE------------------KKTEPKQHASKQHASK-RARKQRARKQRARKQR 100
+A+R++ + T+ A + HA R +RAR+QRAR +R
Sbjct: 754 SEHAAERRDAHEHGTAYRKTRTTRATTRSTKAPTRAPRAHAGAIRVGARRARRQRARDRR 933
Query: 101 ARNKNVKSVKNAKNTKQQR 119
+ N + +A +T+++R
Sbjct: 934 KSDANDRRHTHAYSTRRER 990
Score = 34.3 bits (77), Expect = 0.020
Identities = 18/72 (25%), Positives = 36/72 (50%)
Frame = +3
Query: 56 RRRRQTGSAQRKEKKTEPKQHASKQHASKRARKQRARKQRARKQRARNKNVKSVKNAKNT 115
RRRR+ A+ ++ + A++ R++RAR + AR+ RAR+ + +A++
Sbjct: 654 RRRRRAPRAREAHRQRARRARAARDRRRPAPRRKRARSRAARRARARHSIQEDADDARDD 833
Query: 116 KQQRQAKSHRDR 127
+ A + R
Sbjct: 834 EIDESADTRAAR 869
Score = 31.2 bits (69), Expect = 0.17
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +1
Query: 40 ANSSPEVKNSSTDHGGRRRRQTGSAQRKEKKTEPKQHASKQHASKRARKQRAR-KQRARK 98
AN ST R T + R+ + T QH +++ A RAR+ RAR ++RAR
Sbjct: 943 ANDRRHTHAYSTRRERTRTVATRALARQ*RATSRAQHDTERRARTRARRARARARRRARD 1122
Query: 99 QRARNKNVK 107
RA + K
Sbjct: 1123 ARAAARERK 1149
Score = 29.3 bits (64), Expect = 0.63
Identities = 22/72 (30%), Positives = 36/72 (49%)
Frame = +2
Query: 64 AQRKEKKTEPKQHASKQHASKRARKQRARKQRARKQRARNKNVKSVKNAKNTKQQRQAKS 123
++R ++ E QH +++ + RAR R R + AR RARN + A++ +R+
Sbjct: 467 SERASERRERAQHRARR--TTRARVARPRARDARATRARNDERARGRVARS---RRRTTR 631
Query: 124 HRDREVTAVVLP 135
R R TA P
Sbjct: 632 ERRRRPTAPPTP 667
Score = 28.9 bits (63), Expect = 0.82
Identities = 23/100 (23%), Positives = 38/100 (38%), Gaps = 3/100 (3%)
Frame = +3
Query: 47 KNSSTDHGGRRRRQTGSAQRKE---KKTEPKQHASKQHASKRARKQRARKQRARKQRARN 103
+ + RR R S Q + E + A + A R R R R RA RAR
Sbjct: 750 RKRARSRAARRARARHSIQEDADDARDDEIDESADTRAARARRRDSRRRASRATAARARQ 929
Query: 104 KNVKSVKNAKNTKQQRQAKSHRDREVTAVVLPLSPSVFSS 143
+ + A + + + ++H D T ++ V S+
Sbjct: 930 TKERRERQATHARVLDETRAHADGRDTRARATMTRDVASA 1049
>TC85442 similar to GP|13543783|gb|AAH06040.1 Unknown (protein for MGC:7642)
{Mus musculus}, partial (62%)
Length = 585
Score = 36.6 bits (83), Expect = 0.004
Identities = 18/67 (26%), Positives = 34/67 (49%)
Frame = +3
Query: 62 GSAQRKEKKTEPKQHASKQHASKRARKQRARKQRARKQRARNKNVKSVKNAKNTKQQRQA 121
G A+ EKK EPK+ K+ K K+ A+K+ +K+ + + K + K K++
Sbjct: 48 GPAKEPEKKEEPKKEEPKKEEEK---KEEAKKEEEKKEGEKKEEPKKEEEKKEEKKEEGE 218
Query: 122 KSHRDRE 128
K +++
Sbjct: 219 KKEEEKK 239
>TC78386 similar to SP|Q9NZW4|DSPP_HUMAN Dentin sialophosphoprotein
precursor [Contains: Dentin phosphoprotein (Dentin
phosphophoryn) (DPP);, partial (2%)
Length = 726
Score = 36.2 bits (82), Expect = 0.005
Identities = 33/158 (20%), Positives = 72/158 (44%), Gaps = 32/158 (20%)
Frame = +3
Query: 1 QRKQIHQEHKNQKTENSSEILRDSCTNLH-------HRIDS-------TAIQSANSSPEV 46
+RK+ H+ +++ ++S +I + S ++ H HR S +++ ++ S
Sbjct: 111 RRKRHHRSRRDRDNKDSLKIRKKSKSHSHAKRRRKHHRYSSDSDFYSSSSLSDSSRSESS 290
Query: 47 KNSS--TDHGGRRRRQTGSAQRKEKKTEPKQHASKQHASKRARKQRARKQRA------RK 98
NS T H ++ +++ ++ ++K K H K+H K + K++ +R+ K
Sbjct: 291 SNSEHETSHRSKKHKKSDKPKKNKEKERSKSHRHKRH--KHSLKEKPNGERSSSPVQLSK 464
Query: 99 QRARNKN----------VKSVKNAKNTKQQRQAKSHRD 126
RNK+ K + TK+ ++A+S R+
Sbjct: 465 FLGRNKDDGVRRSAVSGKKILLKLDKTKEDKEAESKRN 578
>BQ151366 similar to GP|20146300|dbj hypothetical protein~similar to Oryza
sativa OSJNBa0058E19.20, partial (9%)
Length = 1137
Score = 35.8 bits (81), Expect = 0.007
Identities = 28/78 (35%), Positives = 38/78 (47%), Gaps = 8/78 (10%)
Frame = +3
Query: 55 GRRRRQTGSAQRKEKKTEP-------KQHASKQHASKR-ARKQRARKQRARKQRARNKNV 106
G RRRQ G+ + KEKK P K+ AS+ R +QR +QR +K+ K
Sbjct: 123 GGRRRQRGTTREKEKKGAPGPGPPAKKKAASRSGGGARGGGEQRNPRQRTKKE----KKN 290
Query: 107 KSVKNAKNTKQQRQAKSH 124
K N T+ RQA S+
Sbjct: 291 KRKTNQPKTEGARQASSN 344
Score = 25.8 bits (55), Expect = 7.0
Identities = 16/69 (23%), Positives = 28/69 (40%), Gaps = 7/69 (10%)
Frame = +2
Query: 39 SANSSPEVKNSSTDHGGRRRRQTGSAQRKEKKTEPKQH-------ASKQHASKRARKQRA 91
+A P + ++RR RKEK EPK+ A K A+ + +++
Sbjct: 113 TARRRPPPPTGDHERKRKKRRTRPGPPRKEKSGEPKRRGGPGRGGAKKPEATNKEGEEKQ 292
Query: 92 RKQRARKQR 100
+K + R
Sbjct: 293 KKDEPAQDR 319
>BQ137236 weakly similar to GP|19070096|emb UL49 tegument protein
{Pseudorabies virus}, partial (10%)
Length = 1224
Score = 35.8 bits (81), Expect = 0.007
Identities = 16/66 (24%), Positives = 31/66 (46%)
Frame = +1
Query: 53 HGGRRRRQTGSAQRKEKKTEPKQHASKQHASKRARKQRARKQRARKQRARNKNVKSVKNA 112
H R +++TG +RK+K KQH R+Q + ++ +R R + K +
Sbjct: 283 HTQRHQKETGEGERKKKTATTGPEGRKQHNRPGGRRQPRPRTKSEGERKRKEGAKEEERE 462
Query: 113 KNTKQQ 118
+ T ++
Sbjct: 463 RETNKK 480
Score = 34.7 bits (78), Expect = 0.015
Identities = 23/75 (30%), Positives = 33/75 (43%), Gaps = 15/75 (20%)
Frame = +2
Query: 69 KKTEPKQHASKQHASKRARKQRARKQRARKQRARNKN---------------VKSVKNAK 113
KKT P H K KRAR + RK+R R+ R N K +NAK
Sbjct: 260 KKTRPPPHTRKDTKKKRAR-ENGRKRRPRRGRKDENNTTDQGAGGNRDPEPKAKGRENAK 436
Query: 114 NTKQQRQAKSHRDRE 128
+++R+ + R R+
Sbjct: 437 RARRRRKERGKRTRK 481
Score = 32.7 bits (73), Expect = 0.057
Identities = 26/129 (20%), Positives = 52/129 (40%), Gaps = 2/129 (1%)
Frame = +1
Query: 2 RKQIHQEHKNQKTENSSEILRDSCTNLHHRIDSTAIQSANSSPEVKNSSTDHGGRRRRQT 61
R + E + ++ E + E R+ TN S + + +TD + T
Sbjct: 397 RPRTKSEGERKRKEGAKEEERERETN-----------KKGSETKGRQPTTDTHADDTQHT 543
Query: 62 GSAQRKE--KKTEPKQHASKQHASKRARKQRARKQRARKQRARNKNVKSVKNAKNTKQQR 119
+ QR + + ++ + A++RAR ++Q A +Q R + + TKQ+
Sbjct: 544 TTTQRSPGPRHADGQRERHAEAAARRARVASTQEQNAVEQTQRTSATRPASARRTTKQES 723
Query: 120 QAKSHRDRE 128
+ H + E
Sbjct: 724 EESKHEETE 750
Score = 31.2 bits (69), Expect = 0.17
Identities = 20/94 (21%), Positives = 42/94 (44%), Gaps = 14/94 (14%)
Frame = +3
Query: 49 SSTDHGGRRRRQTGSAQRKEKKTEPKQH---------ASKQHASKRARKQRARKQRARKQ 99
+ ++H G R + +A ++ ++ K H A + A++ AR+ R + +Q
Sbjct: 624 AGSEHAGTERSRADAANERDTTSKRKTHDEAGERREQARRDRATETARRNATRDRTPVEQ 803
Query: 100 RARNKNVKSV-----KNAKNTKQQRQAKSHRDRE 128
RA K+ K + T+ Q ++H D++
Sbjct: 804 RATTTTRKTHTAIKHKRTQYTRTHTQKEAHSDKQ 905
Score = 30.4 bits (67), Expect = 0.28
Identities = 20/97 (20%), Positives = 40/97 (40%), Gaps = 9/97 (9%)
Frame = +3
Query: 3 KQIHQEHKNQKTENSSEILRDSCTNLH----HRIDST-----AIQSANSSPEVKNSSTDH 53
++ +++H N+K ++ D T H ST Q A + + + H
Sbjct: 930 RRTNRKHSNKKLTTNTATTHDQQTQNRTTHTHNSSSTRDRQNTRQHARRTASSEQDNRTH 1109
Query: 54 GGRRRRQTGSAQRKEKKTEPKQHASKQHASKRARKQR 90
R R + + +++ T QH +QH +++ QR
Sbjct: 1110 TARHRTRREQTRTRQQTTHHTQHTIRQHTTQQRDTQR 1220
Score = 29.3 bits (64), Expect = 0.63
Identities = 21/99 (21%), Positives = 41/99 (41%), Gaps = 5/99 (5%)
Frame = +3
Query: 33 DSTAIQSANSSPEVKNSSTDHGGRRRRQTGSAQRKEKKTEPKQHASKQHASKRARKQRAR 92
++T Q+ E + GG+R +R E + +HA ++H + + R
Sbjct: 387 EATETQNQKRRGEKTQRGREGGGKREGNEQERERDEGEATHDRHARRRHTTHHDDPAQPR 566
Query: 93 KQ-RARKQRARNKNVKSV----KNAKNTKQQRQAKSHRD 126
Q R R +RA + + ++A + + A + RD
Sbjct: 567 TQTRGRAERATRRGGSATGAGSEHAGTERSRADAANERD 683
Score = 26.2 bits (56), Expect = 5.3
Identities = 22/92 (23%), Positives = 38/92 (40%), Gaps = 10/92 (10%)
Frame = +2
Query: 45 EVKNSSTDHGGRRRRQTGSAQRKEKKTE--------PKQHASKQHASKRARKQR-ARKQR 95
+ K GR+RR + + T+ P+ A + +KRAR++R R +R
Sbjct: 293 DTKKKRARENGRKRRPRRGRKDENNTTDQGAGGNRDPEPKAKGRENAKRARRRRKERGKR 472
Query: 96 ARK-QRARNKNVKSVKNAKNTKQQRQAKSHRD 126
RK R R N + + R+ + +D
Sbjct: 473 TRKGARRRGGNPRPTRTPTTHNTPRRPSAAQD 568
>TC83053 homologue to GP|15705932|gb|AAL05884.1 transcriptional activator
FHA1 {Nicotiana tabacum}, partial (55%)
Length = 561
Score = 35.4 bits (80), Expect = 0.009
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Frame = +1
Query: 35 TAIQSANSSP--EVKNSSTDHGGRRRRQTGSAQRKEKKTEPK-QHASKQHASKRARKQRA 91
T IQ +P + + +TDH RRRR+ GS R+ + + HA+ QH + ++
Sbjct: 25 TVIQLHKQTPFSAIHDGNTDH--RRRRRRGSRIRETPRRRFRILHANLQHNPRPQLQEIH 198
Query: 92 RKQRARKQRARNKNVKS 108
R++R K R RN+++ S
Sbjct: 199 RRRRPIKSRRRNEHLPS 249
>TC91508 weakly similar to SP|P52162|MAX_CHICK MAX protein. [Chicken]
{Gallus gallus}, partial (16%)
Length = 1350
Score = 35.0 bits (79), Expect = 0.011
Identities = 24/86 (27%), Positives = 39/86 (44%)
Frame = +1
Query: 11 NQKTENSSEILRDSCTNLHHRIDSTAIQSANSSPEVKNSSTDHGGRRRRQTGSAQRKEKK 70
NQ +SSE R + HHR + S +SS + K+ RR + S R+EK
Sbjct: 250 NQDYSSSSEEERSRKRSRHHRHRRRDVGSDSSSDDEKD---------RRSSRSKGRREKS 402
Query: 71 TEPKQHASKQHASKRARKQRARKQRA 96
+ K SK+H+ + ++ R+
Sbjct: 403 SREKSSGSKKHSKHKKHRKHDSPSRS 480
>BQ137254 similar to GP|22946423|gb| CG31813-PA {Drosophila melanogaster},
partial (12%)
Length = 1220
Score = 35.0 bits (79), Expect = 0.011
Identities = 24/107 (22%), Positives = 45/107 (41%), Gaps = 13/107 (12%)
Frame = +3
Query: 38 QSANSSPEVKNSSTDHGGRRRRQTGSAQRKEKKTEPKQHA-SKQHASKRARKQRARKQRA 96
+S + ++ T+H R R T + R + E A ++QHA+ R + A Q
Sbjct: 552 ESRDDRARESSAQTEHHTRTRPTTATTARARARGEIGSPAHAQQHAAHHTRARAASTQTR 731
Query: 97 RKQRARNKNVKSVK------------NAKNTKQQRQAKSHRDREVTA 131
R +RA ++ + + + +QQ + ++HRD A
Sbjct: 732 RARRASRRDTRQTQPR*TDDGVSQNERTERDEQQHERRAHRDASTRA 872
Score = 32.7 bits (73), Expect = 0.057
Identities = 19/70 (27%), Positives = 38/70 (54%)
Frame = +1
Query: 56 RRRRQTGSAQRKEKKTEPKQHASKQHASKRARKQRARKQRARKQRARNKNVKSVKNAKNT 115
RRRR+ + + + TE ++ A+++ + RAR R+QRAR + R+ ++ + + T
Sbjct: 520 RRRRERE*REERAETTE-RERAARRRNTTRARGLPQRQQRARARAERSGRQRTHSSTQRT 696
Query: 116 KQQRQAKSHR 125
R ++ R
Sbjct: 697 THARARRARR 726
Score = 30.0 bits (66), Expect = 0.37
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 16/94 (17%)
Frame = +2
Query: 54 GGRRRRQTGS---------AQRKEKKTEPKQHASKQHASKRA-------RKQRARKQRAR 97
G RRR+ G+ +RK++ Q+ ++ A +RA K+ R+Q AR
Sbjct: 398 GWGRRRKGGTRTAPRHKHRPRRKQRNKNDTQNGPRRRARRRADDENVSRGKREPRRQSAR 577
Query: 98 KQRARNKNVKSVKNAKNTKQQRQAKSHRDREVTA 131
+QRA A ++ +A++ RDR +A
Sbjct: 578 EQRA--DGTPHAHAAYHSDNSARARARRDRVASA 673
Score = 28.9 bits (63), Expect = 0.82
Identities = 23/63 (36%), Positives = 36/63 (56%), Gaps = 3/63 (4%)
Frame = +1
Query: 45 EVKNSSTD--HGGRRR-RQTGSAQRKEKKTEPKQHASKQHASKRARKQRARKQRARKQRA 101
+V+++ D G R R RQT ++ R ++ E + S + RAR +RA+K RA RA
Sbjct: 730 DVRDARADVTQGRRNRGRQTTASARTREQREMSSNTSGERIGTRAR-ERAQK-RAAAARA 903
Query: 102 RNK 104
RN+
Sbjct: 904 RNQ 912
>BQ137243 similar to GP|2624970|gb|A proline-rich protein 9-1 {Mus musculus},
partial (13%)
Length = 1145
Score = 34.7 bits (78), Expect = 0.015
Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +3
Query: 54 GGRRRRQTGSAQRKEKKTEPKQHASKQHA-SKRARKQRARKQRARKQRARNKNVKSVKNA 112
GGR R +A+ K ++H K+HA ++ R+ R QR ++R +N + +
Sbjct: 123 GGRARHTRPTAEPTRKPKGRREHREKEHALAENQRQSTGRPQRKVRKRVIKRNQGADRRK 302
Query: 113 KNTKQQRQAKSHR 125
N K +++ + R
Sbjct: 303 ANKKGKKKEEGER 341
Score = 30.4 bits (67), Expect = 0.28
Identities = 22/121 (18%), Positives = 49/121 (40%)
Frame = +3
Query: 3 KQIHQEHKNQKTENSSEILRDSCTNLHHRIDSTAIQSANSSPEVKNSSTDHGGRRRRQTG 62
++ +Q+ + Q+ E+ + + + H +I+ +A S K T + Q
Sbjct: 795 REKNQDVQRQRDEHDKQREKRAQHRKHTQIECSANDREESEGHEKRRRTTESAKEAAQRQ 974
Query: 63 SAQRKEKKTEPKQHASKQHASKRARKQRARKQRARKQRARNKNVKSVKNAKNTKQQRQAK 122
+ + E +TE + +A++ +QR + R R K K K K+ + +
Sbjct: 975 TTRPSEHRTE----SDSTNANEARERQRPATNQTTITRGRQNRPKHRKGRKARKESNEKR 1142
Query: 123 S 123
+
Sbjct: 1143T 1145
Score = 28.5 bits (62), Expect = 1.1
Identities = 21/77 (27%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Frame = +2
Query: 56 RRRRQTGSAQRKEKKTEPKQHA-SKQHASKRARKQRARKQRARKQRARNKNVKSVKNAKN 114
RRRR+T + + KT +HA +K A R+ R+ R+Q S A
Sbjct: 362 RRRRRTNTHSDRHTKTAESEHADAKPKARANDRRTTPREAEGRRQTHIRVAHGSAPTAPG 541
Query: 115 TKQQRQAKSHRDREVTA 131
+S RD ++ A
Sbjct: 542 DDTAPAHRSARDEKIGA 592
>AW559848 homologue to GP|21592490|gb| unknown {Arabidopsis thaliana},
partial (13%)
Length = 506
Score = 34.3 bits (77), Expect = 0.020
Identities = 24/106 (22%), Positives = 48/106 (44%)
Frame = +1
Query: 1 QRKQIHQEHKNQKTENSSEILRDSCTNLHHRIDSTAIQSANSSPEVKNSSTDHGGRRRRQ 60
++K ++ K + N + S TN R +S A+ + + K S T G + +
Sbjct: 184 EQKPLNHARKITRVTNEDSVQCVSTTNGGARGNSNAVN--DDGGDGKRSKTS--GNSKGE 351
Query: 61 TGSAQRKEKKTEPKQHASKQHASKRARKQRARKQRARKQRARNKNV 106
S+ + ++T + H K + RAR+ +A + +RAR + +
Sbjct: 352 ENSSGKHAEETSDEPHPKKDYIHVRARRGQATDSHSLAERARREKI 489
>BQ137626 homologue to PIR|S67655|S67 probable membrane protein YDL112w -
yeast (Saccharomyces cerevisiae), partial (1%)
Length = 1101
Score = 33.9 bits (76), Expect = 0.026
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +2
Query: 47 KNSSTDHGGRRRRQTGSAQRKEK-KTEPKQHASKQHASKRARKQRARKQRARKQRARNKN 105
+ S+ D RR Q R+E+ KT S+QH++ R + R ++ R RAR N
Sbjct: 866 RTSALDRAERR**Q*ERGVRRERSKTRATDAESRQHSTARHPRDALRVRQQRTTRAREYN 1045
Query: 106 VKSVKNAKNTKQQRQAK 122
+ A +++R+++
Sbjct: 1046ERHDSEASGRREERESR 1096
>BQ137242 similar to GP|9800281|gb|A pR69 {rat cytomegalovirus Maastricht},
partial (2%)
Length = 1023
Score = 33.9 bits (76), Expect = 0.026
Identities = 30/134 (22%), Positives = 55/134 (40%), Gaps = 11/134 (8%)
Frame = +3
Query: 10 KNQKTENSSEILRDSCTNLHHRIDSTAIQSANSSPE----------VKNSSTDHGGRRRR 59
+ Q T + +R S HR D Q PE N+ T H R+R
Sbjct: 534 RKQNTRRKRDAMRASAER-RHRPDERQKQQ-QEKPE**MDEM*EQCANNTRTTHSNVRKR 707
Query: 60 QTGSAQRKEKKTEPKQHASKQHASKRARKQRARKQ-RARKQRARNKNVKSVKNAKNTKQQ 118
+ +K E ++ + +RA++ RA+++ R ++R RN++ +V A +
Sbjct: 708 RMNDTHAAREK*EQERREEEHRTRERAQQHRAQQEKRNEEERKRNRD-STVHGASINTKD 884
Query: 119 RQAKSHRDREVTAV 132
Q + + R A+
Sbjct: 885 VQTEQDKIRAAEAI 926
>BF646398 similar to GP|14028993|gb Putative U1 small nuclear
ribonucleoprotein {Oryza sativa}, partial (29%)
Length = 503
Score = 33.1 bits (74), Expect = 0.044
Identities = 14/50 (28%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +2
Query: 53 HGGRRRRQTGSAQRKEKKTEPKQHASKQHASKRAR-KQRARKQRARKQRA 101
H GR ++Q+G ++ +E + ++HA + R R K R R++ ++R+
Sbjct: 353 HSGREQQQSGPSRSEEPRVREERHADRDREKSRERGKDRDRERERSRERS 502
>TC81816 similar to GP|8096269|dbj|BAA95789.1 KED {Nicotiana tabacum},
partial (13%)
Length = 663
Score = 33.1 bits (74), Expect = 0.044
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 25/96 (26%)
Frame = +1
Query: 57 RRRQTGSAQRKEKKTEPKQHASKQHASKRARKQRAR------------------KQRARK 98
RRR+ +R+EKKT+ + +++ K R++R R ++R R+
Sbjct: 328 RRRRKRKRRRREKKTKTRM-VKRRNLRKTRRRKRTRMKTMMKVRMEVRKRRIRIRKRKRR 504
Query: 99 QRARNKNVKSV-------KNAKNTKQQRQAKSHRDR 127
+R R K VK + K K K++R+ K R R
Sbjct: 505 RRMRKKRVKYL*GILI*KKPRKKVKRRRRKKKTRKR 612
>BQ150994 similar to GP|22122173|dbj preproneuropeptide B {Homo sapiens},
partial (15%)
Length = 1036
Score = 32.7 bits (73), Expect = 0.057
Identities = 18/64 (28%), Positives = 33/64 (51%)
Frame = +1
Query: 56 RRRRQTGSAQRKEKKTEPKQHASKQHASKRARKQRARKQRARKQRARNKNVKSVKNAKNT 115
RR Q AQRK + P ++ + + + KQRA K+R R++ +S ++A++
Sbjct: 463 RRGAQNAGAQRKNDEPSPNKNQTTEKKDQTREKQRAEKRR----DGRSETQQSTQHAQDP 630
Query: 116 KQQR 119
+ R
Sbjct: 631 RHPR 642
Score = 30.0 bits (66), Expect = 0.37
Identities = 27/120 (22%), Positives = 50/120 (41%), Gaps = 29/120 (24%)
Frame = +3
Query: 38 QSANSSPEVKNSSTDHG--GRRRRQ-----TGSAQRKEKKTEPKQHASKQHASKRAR--- 87
++A +SP +N++ G G R++ A K+T P H ++H +R
Sbjct: 153 KNAGASPPTENATGRRGPAGNARKEGEHTPPPPANTNTKRTTPHGHRQRKHTRRRRETSR 332
Query: 88 ----------KQRARKQRARKQ---------RARNKNVKSVKNAKNTKQQRQAKSHRDRE 128
K+ AR++RAR++ R R + + A ++R+A+ R E
Sbjct: 333 AEGEREREGTKKEARRKRARRKKETPTPDGPRPRRGITRPERQATRRAERRRAEKKRRTE 512
Score = 28.5 bits (62), Expect = 1.1
Identities = 22/88 (25%), Positives = 34/88 (38%)
Frame = +2
Query: 11 NQKTENSSEILRDSCTNLHHRIDSTAIQSANSSPEVKNSSTDHGGRRRRQTGSAQRKEKK 70
N E S E R T + ++ P K R +TG A+R +
Sbjct: 443 NPPRETSDEARR---TQARREKTTNRARTKTKPPRKKTRQERSSAPRSGETGEARRNRAR 613
Query: 71 TEPKQHASKQHASKRARKQRARKQRARK 98
+ K H + HA +R ++ R RA+K
Sbjct: 614 STHKTHDT--HARERRGARKGRAGRAQK 691
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.308 0.118 0.310
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,574,245
Number of Sequences: 36976
Number of extensions: 35283
Number of successful extensions: 559
Number of sequences better than 10.0: 135
Number of HSP's better than 10.0 without gapping: 500
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 535
length of query: 150
length of database: 9,014,727
effective HSP length: 87
effective length of query: 63
effective length of database: 5,797,815
effective search space: 365262345
effective search space used: 365262345
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 54 (25.4 bits)
Medicago: description of AC147010.10