Medicago
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC147010.10 - phase: 1 
         (150 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

AJ500818 weakly similar to GP|10435304|dbj unnamed protein produ...    44  2e-05
BQ137234 similar to EGAD|35719|3709 hypothetical protein {Burkho...    42  9e-05
AW585567                                                               38  0.001
BQ150123 similar to GP|21109992|gb| TonB-dependent receptor {Xan...    38  0.002
BQ137346 homologue to GP|15027095|em hypothetical protein LT.09 ...    38  0.002
BQ137255 homologue to PIR|B34768|B347 ORF5 protein - Orf virus (...    37  0.002
TC85442 similar to GP|13543783|gb|AAH06040.1 Unknown (protein fo...    37  0.004
TC78386 similar to SP|Q9NZW4|DSPP_HUMAN Dentin sialophosphoprote...    36  0.005
BQ151366 similar to GP|20146300|dbj hypothetical protein~similar...    36  0.007
BQ137236 weakly similar to GP|19070096|emb UL49 tegument protein...    36  0.007
TC83053 homologue to GP|15705932|gb|AAL05884.1 transcriptional a...    35  0.009
TC91508 weakly similar to SP|P52162|MAX_CHICK MAX protein. [Chic...    35  0.011
BQ137254 similar to GP|22946423|gb| CG31813-PA {Drosophila melan...    35  0.011
BQ137243 similar to GP|2624970|gb|A proline-rich protein 9-1 {Mu...    35  0.015
AW559848 homologue to GP|21592490|gb| unknown {Arabidopsis thali...    34  0.020
BQ137626 homologue to PIR|S67655|S67 probable membrane protein Y...    34  0.026
BQ137242 similar to GP|9800281|gb|A pR69 {rat cytomegalovirus Ma...    34  0.026
BF646398 similar to GP|14028993|gb Putative U1 small nuclear rib...    33  0.044
TC81816 similar to GP|8096269|dbj|BAA95789.1 KED {Nicotiana taba...    33  0.044
BQ150994 similar to GP|22122173|dbj preproneuropeptide B {Homo s...    33  0.057

>AJ500818 weakly similar to GP|10435304|dbj unnamed protein product {Homo
           sapiens}, partial (12%)
          Length = 457

 Score = 43.9 bits (102), Expect = 2e-05
 Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 6/99 (6%)
 Frame = -1

Query: 30  HRIDSTAIQSANSSPEVKNSSTDHGGRRRRQTGSAQRKEKKTEPKQHASKQHASKR---- 85
           H + S      +++P+ K+  T     + R+    +   K+   K++  K++A KR    
Sbjct: 352 HMVTSVTHMVTSATPKQKHMVTSVMPTQ*RRNDKRRNARKRNARKRNVRKRNARKRNARK 173

Query: 86  --ARKQRARKQRARKQRARNKNVKSVKNAKNTKQQRQAK 122
              RK+ ARK+ ARK+ AR +NV+     K   ++R  K
Sbjct: 172 RNVRKRNARKRNARKRNARKRNVRKRNVRKRNVRKRNVK 56



 Score = 39.7 bits (91), Expect = 5e-04
 Identities = 26/104 (25%), Positives = 51/104 (49%), Gaps = 1/104 (0%)
 Frame = -1

Query: 26  TNLHHRIDSTAIQSANSSPEVKNSSTDHGGRRRRQTGSAQRKEKKTEPKQHASKQHASKR 85
           T++ H + S   +  +    V +  T    +++    S       T+ +++  +++A KR
Sbjct: 397 TSVTHMVTSATPKQMHMVTSVTHMVTSATPKQKHMVTSVM----PTQ*RRNDKRRNARKR 230

Query: 86  -ARKQRARKQRARKQRARNKNVKSVKNAKNTKQQRQAKSHRDRE 128
            ARK+  RK+ ARK+ AR +NV+     K   ++R A+    R+
Sbjct: 229 NARKRNVRKRNARKRNARKRNVRKRNARKRNARKRNARKRNVRK 98



 Score = 29.6 bits (65), Expect = 0.48
 Identities = 13/45 (28%), Positives = 24/45 (52%)
 Frame = -1

Query: 87  RKQRARKQRARKQRARNKNVKSVKNAKNTKQQRQAKSHRDREVTA 131
           +++ ARK+ ARK+  R +N +     K   ++R A+    R+  A
Sbjct: 253 KRRNARKRNARKRNVRKRNARKRNARKRNVRKRNARKRNARKRNA 119


>BQ137234 similar to EGAD|35719|3709 hypothetical protein {Burkholderia
           cepacia}, partial (6%)
          Length = 1184

 Score = 42.0 bits (97), Expect = 9e-05
 Identities = 31/137 (22%), Positives = 59/137 (42%), Gaps = 9/137 (6%)
 Frame = +3

Query: 1   QRKQIHQEHKNQKTENSSEILRDSCTNLHHRIDSTAIQSAN---SSPEVKNSSTDHGGRR 57
           +R + H++   +      E  ++  T   H   +   ++ +   +        T H  RR
Sbjct: 423 RRARPHEQEAEKTNAQRRERQKEQTTTEKHEHSTQHTETRDHKSAGARASRDRTSHQQRR 602

Query: 58  RRQTGSA---QRKEKKTEPK---QHASKQHASKRARKQRARKQRARKQRARNKNVKSVKN 111
            RQ G     QRK+K T  +   +HA  +  +   R +  R +  R++R R++  +S  +
Sbjct: 603 *RQHGRGKKNQRKDKATRRRARTRHAEARRTTHAPRSEETRGRARRRERQRDRG-QSRSH 779

Query: 112 AKNTKQQRQAKSHRDRE 128
            +  K + Q + HR RE
Sbjct: 780 RRRQKDETQEQEHRQRE 830



 Score = 38.1 bits (87), Expect = 0.001
 Identities = 18/90 (20%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
 Frame = +1

Query: 38  QSANSSPEVKNSSTDHGGRRRRQTGSAQRKEKKTEPKQHASK-QHASKRARKQRARKQRA 96
           + A+  P  K  +   G  +RR     +RKE + +PK    K    +++ +KQ  R++  
Sbjct: 205 RGADRPPNRKGEARRAGRNKRRSQRQKERKENERKPKTKQKKGGEETRKKKKQPQRRRGE 384

Query: 97  RKQRARNKNVKSVKNAKNTKQQRQAKSHRD 126
           R+++   +  +  +    T ++++ ++H++
Sbjct: 385 REEKGEGEEARKREGPGRTNRKQKRRTHKE 474



 Score = 35.0 bits (79), Expect = 0.011
 Identities = 20/89 (22%), Positives = 37/89 (41%), Gaps = 2/89 (2%)
 Frame = +3

Query: 38  QSANSSPEVKNSSTDHGGRRRRQTGSAQ--RKEKKTEPKQHASKQHASKRARKQRARKQR 95
           +   + PE K    +    + +     +  +KEKKT PK+   ++   +R R    R+ R
Sbjct: 255 EKQEAEPEAKRKKRERTKTKNKAKKGRRGNKKEKKTTPKETGRERREGRRRRSTEERRAR 434

Query: 96  ARKQRARNKNVKSVKNAKNTKQQRQAKSH 124
             +Q A   N    +  +  K+Q   + H
Sbjct: 435 PHEQEAEKTN---AQRRERQKEQTTTEKH 512



 Score = 34.3 bits (77), Expect = 0.020
 Identities = 28/128 (21%), Positives = 48/128 (36%), Gaps = 9/128 (7%)
 Frame = +3

Query: 1   QRKQIHQEHKNQKTENSSEILRDSCTNLHHRIDSTA----IQSANSSPEVKNSSTDHG-- 54
           Q+++  Q  + +K +   +  R      H     T      +        +    D G  
Sbjct: 591 QQRR*RQHGRGKKNQRKDKATRRRARTRHAEARRTTHAPRSEETRGRARRRERQRDRGQS 770

Query: 55  -GRRRRQTGSAQRKEKKTEPKQHASKQHASKRARKQRARKQR--ARKQRARNKNVKSVKN 111
              RRRQ    Q +E +    +  S     +RA  + ARK R  AR++RAR    +    
Sbjct: 771 RSHRRRQKDETQEQEHRQREPRKRSSTSTRERAHARTARKARGAARRRRARTHGQERAHE 950

Query: 112 AKNTKQQR 119
            + T ++R
Sbjct: 951 QQKTSERR 974



 Score = 32.7 bits (73), Expect = 0.057
 Identities = 31/147 (21%), Positives = 57/147 (38%), Gaps = 23/147 (15%)
 Frame = +1

Query: 2   RKQIHQEHKNQKTENSSEILRDSCTNLHHRIDSTAIQSANSSPEVKNSSTDHGGRRRRQT 61
           RKQ  + HK +  + S +  R + T  + +   T    A    E    +++ G      T
Sbjct: 445 RKQKRRTHKEESGKKSKQQQRSTSTAHNTQKRETTRAPARERAETARVTSNAGD---DST 615

Query: 62  GSAQRKEKKT----------------EPKQHASKQHASKRARKQ-------RARKQRARK 98
           G+A+R  +KT                +P    +++H  +R  ++       RA     +K
Sbjct: 616 GAAKRIREKTRRRAAERGRDTPRHDGQPTHREARRHVGERGEERDNETEGSRAATDADKK 795

Query: 99  QRARNKNVKSVKNAKNTKQQRQAKSHR 125
            R R+KN      A+     R+++  R
Sbjct: 796 TRRRSKNTGRENRAREAAPARESERTR 876


>AW585567 
          Length = 491

 Score = 38.1 bits (87), Expect = 0.001
 Identities = 36/104 (34%), Positives = 50/104 (47%), Gaps = 8/104 (7%)
 Frame = +1

Query: 10  KNQKTENSS---EILRDSCTNLHHRIDSTAIQSANSSPEVKNSSTDHGGRRRRQTGSAQR 66
           +NQ   NSS    ILRDS  N HHRI S AI      P   +        R R+  S +R
Sbjct: 184 QNQIHPNSSFFSVILRDSFANRHHRIKSFAI------PVRIHHHWRRIQARSRRIRSLRR 345

Query: 67  KEKKT--EPKQHASKQHA---SKRARKQRARKQRARKQRARNKN 105
           +EK+T  EP +   +QH      +AR Q+A    +  +  R+K+
Sbjct: 346 REKETEFEPVKKKKEQHRFIFGFKARNQQAEPDSSVSEDLRSKS 477


>BQ150123 similar to GP|21109992|gb| TonB-dependent receptor {Xanthomonas
           axonopodis pv. citri str. 306}, partial (2%)
          Length = 1131

 Score = 37.7 bits (86), Expect = 0.002
 Identities = 30/101 (29%), Positives = 47/101 (45%), Gaps = 1/101 (0%)
 Frame = +2

Query: 22  RDSCTNLHHRIDSTAIQSANSSPEVKNSSTDHGGRRRRQTGSAQRKEKKTEPKQHASKQH 81
           RD+ T  H +  ST  +       V+ S    G   R   GSA+  E     K   +  H
Sbjct: 596 RDAVT--HSKPHSTRAE*DEREDTVRRS----G*SGRETNGSAESDEHTRRDKSSKTTDH 757

Query: 82  ASKRARKQRARKQRARKQRARN-KNVKSVKNAKNTKQQRQA 121
             +RAR++ +R+QRA  +R R  K  ++   AK T+++  A
Sbjct: 758 KRRRARRRASRRQRAPPRRGRRAKGSRTADKAK*TERRDDA 880



 Score = 29.3 bits (64), Expect = 0.63
 Identities = 31/134 (23%), Positives = 50/134 (37%), Gaps = 8/134 (5%)
 Frame = +3

Query: 3   KQIHQEHKNQKTENSSEILRDSC----TNLHHRIDSTAIQSANSSPEVKNSSTDHGGRRR 58
           +Q     K QK ENS +  R       T    R   TA +S  ++    N     GG   
Sbjct: 177 RQNEWNKKVQKNENSRDRERTERPPDPTPAAPRHKETAQKSLEAAARTNNRHPHKGGG-- 350

Query: 59  RQTGSAQRKEKKTEPKQHASKQHASKRARKQRARKQRARKQRARNKNVKSVKNAKNTK-- 116
                       TEP++H  +    ++ R+ R    R   +  R   VKS +    T   
Sbjct: 351 ------------TEPREHEQRTRQHEQTRRTRM*NGRHAIRVTRRSRVKSTQQHGETHRA 494

Query: 117 --QQRQAKSHRDRE 128
             ++R+ +  R++E
Sbjct: 495 QCRERERRGEREKE 536



 Score = 28.1 bits (61), Expect = 1.4
 Identities = 19/88 (21%), Positives = 44/88 (49%), Gaps = 1/88 (1%)
 Frame = +3

Query: 18  SEILRDSCTNLHHRIDSTAIQSANSSPEVKNSSTDHGGRRRRQTGSAQRKEKK-TEPKQH 76
           SE   ++  + HHR       SA+      N++T+   +      + +  +K+  EP+  
Sbjct: 855 SEQNEETTQHAHHR----GRDSADRHDAQANTATNEAKKSTDSDAAQE*PDKRGAEPRTA 1022

Query: 77  ASKQHASKRARKQRARKQRARKQRARNK 104
           A++++  K A + + +++  R+ RAR++
Sbjct: 1023ANEEYEQKDA*ETKTKRRVGRRARARSQ 1106


>BQ137346 homologue to GP|15027095|em hypothetical protein LT.09 {Leishmania
           major}, partial (0%)
          Length = 1101

 Score = 37.7 bits (86), Expect = 0.002
 Identities = 37/153 (24%), Positives = 56/153 (36%), Gaps = 32/153 (20%)
 Frame = +2

Query: 4   QIHQEHKNQKTENSSEILRDSCTNLHHRIDSTAIQSANSS-------------------- 43
           + H E  N+KT       R +  N  H+   TA    + +                    
Sbjct: 650 ETHNEETNEKTRARGSTHRRNHANHTHKNAQTATAETDEARTRTSTSTRREEKSNRAK*E 829

Query: 44  PEVKNSSTDHGGRRRRQTGSAQRKEKKTEPKQHASKQHASKRARKQRARKQRARKQ---- 99
            E +   T HG  RR+ T S  R      P QH     A KR  +++ R  RA  Q    
Sbjct: 830 RERRKHETTHGDARRQTTDSRAR-----APAQHKRDNEAPKRQERRKTRNTRAHAQTHHD 994

Query: 100 ---RARNKNVKSVKN-AKNTK----QQRQAKSH 124
              R R +N ++  + A+ T+     +RQ + H
Sbjct: 995 THRRPRRENTEAATHPARRTRGRAENERQKRPH 1093


>BQ137255 homologue to PIR|B34768|B347 ORF5 protein - Orf virus (strain NZ2),
           partial (10%)
          Length = 1161

 Score = 37.4 bits (85), Expect = 0.002
 Identities = 34/139 (24%), Positives = 62/139 (44%), Gaps = 20/139 (14%)
 Frame = +1

Query: 1   QRKQIHQEHKNQKTENSSEILR-DSCTNLHHRIDSTAIQSANSSPEVKNSSTDHGGRRRR 59
           +R +  +    QKT+++      DS  +   R  +    SA  + E +  +TD G RR  
Sbjct: 580 RRARARKSSAEQKTDDARATTPPDSAADAARRARAKRTDSARDARERR--ATDDGQRRDA 753

Query: 60  QTGSAQRKE------------------KKTEPKQHASKQHASK-RARKQRARKQRARKQR 100
              +A+R++                  + T+    A + HA   R   +RAR+QRAR +R
Sbjct: 754 SEHAAERRDAHEHGTAYRKTRTTRATTRSTKAPTRAPRAHAGAIRVGARRARRQRARDRR 933

Query: 101 ARNKNVKSVKNAKNTKQQR 119
             + N +   +A +T+++R
Sbjct: 934 KSDANDRRHTHAYSTRRER 990



 Score = 34.3 bits (77), Expect = 0.020
 Identities = 18/72 (25%), Positives = 36/72 (50%)
 Frame = +3

Query: 56  RRRRQTGSAQRKEKKTEPKQHASKQHASKRARKQRARKQRARKQRARNKNVKSVKNAKNT 115
           RRRR+   A+   ++   +  A++       R++RAR + AR+ RAR+   +   +A++ 
Sbjct: 654 RRRRRAPRAREAHRQRARRARAARDRRRPAPRRKRARSRAARRARARHSIQEDADDARDD 833

Query: 116 KQQRQAKSHRDR 127
           +    A +   R
Sbjct: 834 EIDESADTRAAR 869



 Score = 31.2 bits (69), Expect = 0.17
 Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
 Frame = +1

Query: 40   ANSSPEVKNSSTDHGGRRRRQTGSAQRKEKKTEPKQHASKQHASKRARKQRAR-KQRARK 98
            AN        ST     R   T +  R+ + T   QH +++ A  RAR+ RAR ++RAR 
Sbjct: 943  ANDRRHTHAYSTRRERTRTVATRALARQ*RATSRAQHDTERRARTRARRARARARRRARD 1122

Query: 99   QRARNKNVK 107
             RA  +  K
Sbjct: 1123 ARAAARERK 1149



 Score = 29.3 bits (64), Expect = 0.63
 Identities = 22/72 (30%), Positives = 36/72 (49%)
 Frame = +2

Query: 64  AQRKEKKTEPKQHASKQHASKRARKQRARKQRARKQRARNKNVKSVKNAKNTKQQRQAKS 123
           ++R  ++ E  QH +++  + RAR  R R + AR  RARN      + A++   +R+   
Sbjct: 467 SERASERRERAQHRARR--TTRARVARPRARDARATRARNDERARGRVARS---RRRTTR 631

Query: 124 HRDREVTAVVLP 135
            R R  TA   P
Sbjct: 632 ERRRRPTAPPTP 667



 Score = 28.9 bits (63), Expect = 0.82
 Identities = 23/100 (23%), Positives = 38/100 (38%), Gaps = 3/100 (3%)
 Frame = +3

Query: 47  KNSSTDHGGRRRRQTGSAQRKE---KKTEPKQHASKQHASKRARKQRARKQRARKQRARN 103
           +  +     RR R   S Q      +  E  + A  + A  R R  R R  RA   RAR 
Sbjct: 750 RKRARSRAARRARARHSIQEDADDARDDEIDESADTRAARARRRDSRRRASRATAARARQ 929

Query: 104 KNVKSVKNAKNTKQQRQAKSHRDREVTAVVLPLSPSVFSS 143
              +  + A + +   + ++H D   T     ++  V S+
Sbjct: 930 TKERRERQATHARVLDETRAHADGRDTRARATMTRDVASA 1049


>TC85442 similar to GP|13543783|gb|AAH06040.1 Unknown (protein for MGC:7642)
           {Mus musculus}, partial (62%)
          Length = 585

 Score = 36.6 bits (83), Expect = 0.004
 Identities = 18/67 (26%), Positives = 34/67 (49%)
 Frame = +3

Query: 62  GSAQRKEKKTEPKQHASKQHASKRARKQRARKQRARKQRARNKNVKSVKNAKNTKQQRQA 121
           G A+  EKK EPK+   K+   K   K+ A+K+  +K+  + +  K  +  K  K++   
Sbjct: 48  GPAKEPEKKEEPKKEEPKKEEEK---KEEAKKEEEKKEGEKKEEPKKEEEKKEEKKEEGE 218

Query: 122 KSHRDRE 128
           K   +++
Sbjct: 219 KKEEEKK 239


>TC78386 similar to SP|Q9NZW4|DSPP_HUMAN Dentin sialophosphoprotein
           precursor [Contains: Dentin phosphoprotein (Dentin
           phosphophoryn) (DPP);, partial (2%)
          Length = 726

 Score = 36.2 bits (82), Expect = 0.005
 Identities = 33/158 (20%), Positives = 72/158 (44%), Gaps = 32/158 (20%)
 Frame = +3

Query: 1   QRKQIHQEHKNQKTENSSEILRDSCTNLH-------HRIDS-------TAIQSANSSPEV 46
           +RK+ H+  +++  ++S +I + S ++ H       HR  S       +++  ++ S   
Sbjct: 111 RRKRHHRSRRDRDNKDSLKIRKKSKSHSHAKRRRKHHRYSSDSDFYSSSSLSDSSRSESS 290

Query: 47  KNSS--TDHGGRRRRQTGSAQRKEKKTEPKQHASKQHASKRARKQRARKQRA------RK 98
            NS   T H  ++ +++   ++ ++K   K H  K+H  K + K++   +R+       K
Sbjct: 291 SNSEHETSHRSKKHKKSDKPKKNKEKERSKSHRHKRH--KHSLKEKPNGERSSSPVQLSK 464

Query: 99  QRARNKN----------VKSVKNAKNTKQQRQAKSHRD 126
              RNK+           K +     TK+ ++A+S R+
Sbjct: 465 FLGRNKDDGVRRSAVSGKKILLKLDKTKEDKEAESKRN 578


>BQ151366 similar to GP|20146300|dbj hypothetical protein~similar to Oryza
           sativa OSJNBa0058E19.20, partial (9%)
          Length = 1137

 Score = 35.8 bits (81), Expect = 0.007
 Identities = 28/78 (35%), Positives = 38/78 (47%), Gaps = 8/78 (10%)
 Frame = +3

Query: 55  GRRRRQTGSAQRKEKKTEP-------KQHASKQHASKR-ARKQRARKQRARKQRARNKNV 106
           G RRRQ G+ + KEKK  P       K+ AS+     R   +QR  +QR +K+    K  
Sbjct: 123 GGRRRQRGTTREKEKKGAPGPGPPAKKKAASRSGGGARGGGEQRNPRQRTKKE----KKN 290

Query: 107 KSVKNAKNTKQQRQAKSH 124
           K   N   T+  RQA S+
Sbjct: 291 KRKTNQPKTEGARQASSN 344



 Score = 25.8 bits (55), Expect = 7.0
 Identities = 16/69 (23%), Positives = 28/69 (40%), Gaps = 7/69 (10%)
 Frame = +2

Query: 39  SANSSPEVKNSSTDHGGRRRRQTGSAQRKEKKTEPKQH-------ASKQHASKRARKQRA 91
           +A   P       +   ++RR      RKEK  EPK+        A K  A+ +  +++ 
Sbjct: 113 TARRRPPPPTGDHERKRKKRRTRPGPPRKEKSGEPKRRGGPGRGGAKKPEATNKEGEEKQ 292

Query: 92  RKQRARKQR 100
           +K    + R
Sbjct: 293 KKDEPAQDR 319


>BQ137236 weakly similar to GP|19070096|emb UL49 tegument protein
           {Pseudorabies virus}, partial (10%)
          Length = 1224

 Score = 35.8 bits (81), Expect = 0.007
 Identities = 16/66 (24%), Positives = 31/66 (46%)
 Frame = +1

Query: 53  HGGRRRRQTGSAQRKEKKTEPKQHASKQHASKRARKQRARKQRARKQRARNKNVKSVKNA 112
           H  R +++TG  +RK+K         KQH     R+Q   + ++  +R R +  K  +  
Sbjct: 283 HTQRHQKETGEGERKKKTATTGPEGRKQHNRPGGRRQPRPRTKSEGERKRKEGAKEEERE 462

Query: 113 KNTKQQ 118
           + T ++
Sbjct: 463 RETNKK 480



 Score = 34.7 bits (78), Expect = 0.015
 Identities = 23/75 (30%), Positives = 33/75 (43%), Gaps = 15/75 (20%)
 Frame = +2

Query: 69  KKTEPKQHASKQHASKRARKQRARKQRARKQRARNKN---------------VKSVKNAK 113
           KKT P  H  K    KRAR +  RK+R R+ R    N                K  +NAK
Sbjct: 260 KKTRPPPHTRKDTKKKRAR-ENGRKRRPRRGRKDENNTTDQGAGGNRDPEPKAKGRENAK 436

Query: 114 NTKQQRQAKSHRDRE 128
             +++R+ +  R R+
Sbjct: 437 RARRRRKERGKRTRK 481



 Score = 32.7 bits (73), Expect = 0.057
 Identities = 26/129 (20%), Positives = 52/129 (40%), Gaps = 2/129 (1%)
 Frame = +1

Query: 2   RKQIHQEHKNQKTENSSEILRDSCTNLHHRIDSTAIQSANSSPEVKNSSTDHGGRRRRQT 61
           R +   E + ++ E + E  R+  TN              S  + +  +TD      + T
Sbjct: 397 RPRTKSEGERKRKEGAKEEERERETN-----------KKGSETKGRQPTTDTHADDTQHT 543

Query: 62  GSAQRKE--KKTEPKQHASKQHASKRARKQRARKQRARKQRARNKNVKSVKNAKNTKQQR 119
            + QR    +  + ++    + A++RAR    ++Q A +Q  R    +     + TKQ+ 
Sbjct: 544 TTTQRSPGPRHADGQRERHAEAAARRARVASTQEQNAVEQTQRTSATRPASARRTTKQES 723

Query: 120 QAKSHRDRE 128
           +   H + E
Sbjct: 724 EESKHEETE 750



 Score = 31.2 bits (69), Expect = 0.17
 Identities = 20/94 (21%), Positives = 42/94 (44%), Gaps = 14/94 (14%)
 Frame = +3

Query: 49  SSTDHGGRRRRQTGSAQRKEKKTEPKQH---------ASKQHASKRARKQRARKQRARKQ 99
           + ++H G  R +  +A  ++  ++ K H         A +  A++ AR+   R +   +Q
Sbjct: 624 AGSEHAGTERSRADAANERDTTSKRKTHDEAGERREQARRDRATETARRNATRDRTPVEQ 803

Query: 100 RARNKNVKSV-----KNAKNTKQQRQAKSHRDRE 128
           RA     K+      K  + T+   Q ++H D++
Sbjct: 804 RATTTTRKTHTAIKHKRTQYTRTHTQKEAHSDKQ 905



 Score = 30.4 bits (67), Expect = 0.28
 Identities = 20/97 (20%), Positives = 40/97 (40%), Gaps = 9/97 (9%)
 Frame = +3

Query: 3    KQIHQEHKNQKTENSSEILRDSCTNLH----HRIDST-----AIQSANSSPEVKNSSTDH 53
            ++ +++H N+K   ++    D  T       H   ST       Q A  +   +  +  H
Sbjct: 930  RRTNRKHSNKKLTTNTATTHDQQTQNRTTHTHNSSSTRDRQNTRQHARRTASSEQDNRTH 1109

Query: 54   GGRRRRQTGSAQRKEKKTEPKQHASKQHASKRARKQR 90
              R R +    + +++ T   QH  +QH +++   QR
Sbjct: 1110 TARHRTRREQTRTRQQTTHHTQHTIRQHTTQQRDTQR 1220



 Score = 29.3 bits (64), Expect = 0.63
 Identities = 21/99 (21%), Positives = 41/99 (41%), Gaps = 5/99 (5%)
 Frame = +3

Query: 33  DSTAIQSANSSPEVKNSSTDHGGRRRRQTGSAQRKEKKTEPKQHASKQHASKRARKQRAR 92
           ++T  Q+     E      + GG+R       +R E +    +HA ++H +      + R
Sbjct: 387 EATETQNQKRRGEKTQRGREGGGKREGNEQERERDEGEATHDRHARRRHTTHHDDPAQPR 566

Query: 93  KQ-RARKQRARNKNVKSV----KNAKNTKQQRQAKSHRD 126
            Q R R +RA  +   +     ++A   + +  A + RD
Sbjct: 567 TQTRGRAERATRRGGSATGAGSEHAGTERSRADAANERD 683



 Score = 26.2 bits (56), Expect = 5.3
 Identities = 22/92 (23%), Positives = 38/92 (40%), Gaps = 10/92 (10%)
 Frame = +2

Query: 45  EVKNSSTDHGGRRRRQTGSAQRKEKKTE--------PKQHASKQHASKRARKQR-ARKQR 95
           + K       GR+RR     + +   T+        P+  A  +  +KRAR++R  R +R
Sbjct: 293 DTKKKRARENGRKRRPRRGRKDENNTTDQGAGGNRDPEPKAKGRENAKRARRRRKERGKR 472

Query: 96  ARK-QRARNKNVKSVKNAKNTKQQRQAKSHRD 126
            RK  R R  N +  +        R+  + +D
Sbjct: 473 TRKGARRRGGNPRPTRTPTTHNTPRRPSAAQD 568


>TC83053 homologue to GP|15705932|gb|AAL05884.1 transcriptional activator
           FHA1 {Nicotiana tabacum}, partial (55%)
          Length = 561

 Score = 35.4 bits (80), Expect = 0.009
 Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
 Frame = +1

Query: 35  TAIQSANSSP--EVKNSSTDHGGRRRRQTGSAQRKEKKTEPK-QHASKQHASKRARKQRA 91
           T IQ    +P   + + +TDH  RRRR+ GS  R+  +   +  HA+ QH  +   ++  
Sbjct: 25  TVIQLHKQTPFSAIHDGNTDH--RRRRRRGSRIRETPRRRFRILHANLQHNPRPQLQEIH 198

Query: 92  RKQRARKQRARNKNVKS 108
           R++R  K R RN+++ S
Sbjct: 199 RRRRPIKSRRRNEHLPS 249


>TC91508 weakly similar to SP|P52162|MAX_CHICK MAX protein. [Chicken]
           {Gallus gallus}, partial (16%)
          Length = 1350

 Score = 35.0 bits (79), Expect = 0.011
 Identities = 24/86 (27%), Positives = 39/86 (44%)
 Frame = +1

Query: 11  NQKTENSSEILRDSCTNLHHRIDSTAIQSANSSPEVKNSSTDHGGRRRRQTGSAQRKEKK 70
           NQ   +SSE  R    + HHR     + S +SS + K+         RR + S  R+EK 
Sbjct: 250 NQDYSSSSEEERSRKRSRHHRHRRRDVGSDSSSDDEKD---------RRSSRSKGRREKS 402

Query: 71  TEPKQHASKQHASKRARKQRARKQRA 96
           +  K   SK+H+  +  ++     R+
Sbjct: 403 SREKSSGSKKHSKHKKHRKHDSPSRS 480


>BQ137254 similar to GP|22946423|gb| CG31813-PA {Drosophila melanogaster},
           partial (12%)
          Length = 1220

 Score = 35.0 bits (79), Expect = 0.011
 Identities = 24/107 (22%), Positives = 45/107 (41%), Gaps = 13/107 (12%)
 Frame = +3

Query: 38  QSANSSPEVKNSSTDHGGRRRRQTGSAQRKEKKTEPKQHA-SKQHASKRARKQRARKQRA 96
           +S +      ++ T+H  R R  T +  R   + E    A ++QHA+   R + A  Q  
Sbjct: 552 ESRDDRARESSAQTEHHTRTRPTTATTARARARGEIGSPAHAQQHAAHHTRARAASTQTR 731

Query: 97  RKQRARNKNVKSVK------------NAKNTKQQRQAKSHRDREVTA 131
           R +RA  ++ +  +              +  +QQ + ++HRD    A
Sbjct: 732 RARRASRRDTRQTQPR*TDDGVSQNERTERDEQQHERRAHRDASTRA 872



 Score = 32.7 bits (73), Expect = 0.057
 Identities = 19/70 (27%), Positives = 38/70 (54%)
 Frame = +1

Query: 56  RRRRQTGSAQRKEKKTEPKQHASKQHASKRARKQRARKQRARKQRARNKNVKSVKNAKNT 115
           RRRR+    + + + TE ++ A+++  + RAR    R+QRAR +  R+   ++  + + T
Sbjct: 520 RRRRERE*REERAETTE-RERAARRRNTTRARGLPQRQQRARARAERSGRQRTHSSTQRT 696

Query: 116 KQQRQAKSHR 125
              R  ++ R
Sbjct: 697 THARARRARR 726



 Score = 30.0 bits (66), Expect = 0.37
 Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 16/94 (17%)
 Frame = +2

Query: 54  GGRRRRQTGS---------AQRKEKKTEPKQHASKQHASKRA-------RKQRARKQRAR 97
           G  RRR+ G+          +RK++     Q+  ++ A +RA        K+  R+Q AR
Sbjct: 398 GWGRRRKGGTRTAPRHKHRPRRKQRNKNDTQNGPRRRARRRADDENVSRGKREPRRQSAR 577

Query: 98  KQRARNKNVKSVKNAKNTKQQRQAKSHRDREVTA 131
           +QRA          A ++    +A++ RDR  +A
Sbjct: 578 EQRA--DGTPHAHAAYHSDNSARARARRDRVASA 673



 Score = 28.9 bits (63), Expect = 0.82
 Identities = 23/63 (36%), Positives = 36/63 (56%), Gaps = 3/63 (4%)
 Frame = +1

Query: 45  EVKNSSTD--HGGRRR-RQTGSAQRKEKKTEPKQHASKQHASKRARKQRARKQRARKQRA 101
           +V+++  D   G R R RQT ++ R  ++ E   + S +    RAR +RA+K RA   RA
Sbjct: 730 DVRDARADVTQGRRNRGRQTTASARTREQREMSSNTSGERIGTRAR-ERAQK-RAAAARA 903

Query: 102 RNK 104
           RN+
Sbjct: 904 RNQ 912


>BQ137243 similar to GP|2624970|gb|A proline-rich protein 9-1 {Mus musculus},
           partial (13%)
          Length = 1145

 Score = 34.7 bits (78), Expect = 0.015
 Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
 Frame = +3

Query: 54  GGRRRRQTGSAQRKEKKTEPKQHASKQHA-SKRARKQRARKQRARKQRARNKNVKSVKNA 112
           GGR R    +A+   K    ++H  K+HA ++  R+   R QR  ++R   +N  + +  
Sbjct: 123 GGRARHTRPTAEPTRKPKGRREHREKEHALAENQRQSTGRPQRKVRKRVIKRNQGADRRK 302

Query: 113 KNTKQQRQAKSHR 125
            N K +++ +  R
Sbjct: 303 ANKKGKKKEEGER 341



 Score = 30.4 bits (67), Expect = 0.28
 Identities = 22/121 (18%), Positives = 49/121 (40%)
 Frame = +3

Query: 3   KQIHQEHKNQKTENSSEILRDSCTNLHHRIDSTAIQSANSSPEVKNSSTDHGGRRRRQTG 62
           ++ +Q+ + Q+ E+  +  + +    H +I+ +A     S    K   T    +   Q  
Sbjct: 795 REKNQDVQRQRDEHDKQREKRAQHRKHTQIECSANDREESEGHEKRRRTTESAKEAAQRQ 974

Query: 63  SAQRKEKKTEPKQHASKQHASKRARKQRARKQRARKQRARNKNVKSVKNAKNTKQQRQAK 122
           + +  E +TE    +   +A++   +QR    +    R R    K  K  K  K+  + +
Sbjct: 975 TTRPSEHRTE----SDSTNANEARERQRPATNQTTITRGRQNRPKHRKGRKARKESNEKR 1142

Query: 123 S 123
           +
Sbjct: 1143T 1145



 Score = 28.5 bits (62), Expect = 1.1
 Identities = 21/77 (27%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
 Frame = +2

Query: 56  RRRRQTGSAQRKEKKTEPKQHA-SKQHASKRARKQRARKQRARKQRARNKNVKSVKNAKN 114
           RRRR+T +   +  KT   +HA +K  A    R+   R+   R+Q        S   A  
Sbjct: 362 RRRRRTNTHSDRHTKTAESEHADAKPKARANDRRTTPREAEGRRQTHIRVAHGSAPTAPG 541

Query: 115 TKQQRQAKSHRDREVTA 131
                  +S RD ++ A
Sbjct: 542 DDTAPAHRSARDEKIGA 592


>AW559848 homologue to GP|21592490|gb| unknown {Arabidopsis thaliana},
           partial (13%)
          Length = 506

 Score = 34.3 bits (77), Expect = 0.020
 Identities = 24/106 (22%), Positives = 48/106 (44%)
 Frame = +1

Query: 1   QRKQIHQEHKNQKTENSSEILRDSCTNLHHRIDSTAIQSANSSPEVKNSSTDHGGRRRRQ 60
           ++K ++   K  +  N   +   S TN   R +S A+   +   + K S T   G  + +
Sbjct: 184 EQKPLNHARKITRVTNEDSVQCVSTTNGGARGNSNAVN--DDGGDGKRSKTS--GNSKGE 351

Query: 61  TGSAQRKEKKTEPKQHASKQHASKRARKQRARKQRARKQRARNKNV 106
             S+ +  ++T  + H  K +   RAR+ +A    +  +RAR + +
Sbjct: 352 ENSSGKHAEETSDEPHPKKDYIHVRARRGQATDSHSLAERARREKI 489


>BQ137626 homologue to PIR|S67655|S67 probable membrane protein YDL112w -
           yeast (Saccharomyces cerevisiae), partial (1%)
          Length = 1101

 Score = 33.9 bits (76), Expect = 0.026
 Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
 Frame = +2

Query: 47  KNSSTDHGGRRRRQTGSAQRKEK-KTEPKQHASKQHASKRARKQRARKQRARKQRARNKN 105
           + S+ D   RR  Q     R+E+ KT      S+QH++ R  +   R ++ R  RAR  N
Sbjct: 866 RTSALDRAERR**Q*ERGVRRERSKTRATDAESRQHSTARHPRDALRVRQQRTTRAREYN 1045

Query: 106 VKSVKNAKNTKQQRQAK 122
            +    A   +++R+++
Sbjct: 1046ERHDSEASGRREERESR 1096


>BQ137242 similar to GP|9800281|gb|A pR69 {rat cytomegalovirus Maastricht},
           partial (2%)
          Length = 1023

 Score = 33.9 bits (76), Expect = 0.026
 Identities = 30/134 (22%), Positives = 55/134 (40%), Gaps = 11/134 (8%)
 Frame = +3

Query: 10  KNQKTENSSEILRDSCTNLHHRIDSTAIQSANSSPE----------VKNSSTDHGGRRRR 59
           + Q T    + +R S     HR D    Q     PE            N+ T H   R+R
Sbjct: 534 RKQNTRRKRDAMRASAER-RHRPDERQKQQ-QEKPE**MDEM*EQCANNTRTTHSNVRKR 707

Query: 60  QTGSAQRKEKKTEPKQHASKQHASKRARKQRARKQ-RARKQRARNKNVKSVKNAKNTKQQ 118
           +        +K E ++   +    +RA++ RA+++ R  ++R RN++  +V  A    + 
Sbjct: 708 RMNDTHAAREK*EQERREEEHRTRERAQQHRAQQEKRNEEERKRNRD-STVHGASINTKD 884

Query: 119 RQAKSHRDREVTAV 132
            Q +  + R   A+
Sbjct: 885 VQTEQDKIRAAEAI 926


>BF646398 similar to GP|14028993|gb Putative U1 small nuclear
           ribonucleoprotein {Oryza sativa}, partial (29%)
          Length = 503

 Score = 33.1 bits (74), Expect = 0.044
 Identities = 14/50 (28%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
 Frame = +2

Query: 53  HGGRRRRQTGSAQRKEKKTEPKQHASKQHASKRAR-KQRARKQRARKQRA 101
           H GR ++Q+G ++ +E +   ++HA +     R R K R R++   ++R+
Sbjct: 353 HSGREQQQSGPSRSEEPRVREERHADRDREKSRERGKDRDRERERSRERS 502


>TC81816 similar to GP|8096269|dbj|BAA95789.1 KED {Nicotiana tabacum},
           partial (13%)
          Length = 663

 Score = 33.1 bits (74), Expect = 0.044
 Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 25/96 (26%)
 Frame = +1

Query: 57  RRRQTGSAQRKEKKTEPKQHASKQHASKRARKQRAR------------------KQRARK 98
           RRR+    +R+EKKT+ +    +++  K  R++R R                  ++R R+
Sbjct: 328 RRRRKRKRRRREKKTKTRM-VKRRNLRKTRRRKRTRMKTMMKVRMEVRKRRIRIRKRKRR 504

Query: 99  QRARNKNVKSV-------KNAKNTKQQRQAKSHRDR 127
           +R R K VK +       K  K  K++R+ K  R R
Sbjct: 505 RRMRKKRVKYL*GILI*KKPRKKVKRRRRKKKTRKR 612


>BQ150994 similar to GP|22122173|dbj preproneuropeptide B {Homo sapiens},
           partial (15%)
          Length = 1036

 Score = 32.7 bits (73), Expect = 0.057
 Identities = 18/64 (28%), Positives = 33/64 (51%)
 Frame = +1

Query: 56  RRRRQTGSAQRKEKKTEPKQHASKQHASKRARKQRARKQRARKQRARNKNVKSVKNAKNT 115
           RR  Q   AQRK  +  P ++ + +   +   KQRA K+R      R++  +S ++A++ 
Sbjct: 463 RRGAQNAGAQRKNDEPSPNKNQTTEKKDQTREKQRAEKRR----DGRSETQQSTQHAQDP 630

Query: 116 KQQR 119
           +  R
Sbjct: 631 RHPR 642



 Score = 30.0 bits (66), Expect = 0.37
 Identities = 27/120 (22%), Positives = 50/120 (41%), Gaps = 29/120 (24%)
 Frame = +3

Query: 38  QSANSSPEVKNSSTDHG--GRRRRQ-----TGSAQRKEKKTEPKQHASKQHASKRAR--- 87
           ++A +SP  +N++   G  G  R++        A    K+T P  H  ++H  +R     
Sbjct: 153 KNAGASPPTENATGRRGPAGNARKEGEHTPPPPANTNTKRTTPHGHRQRKHTRRRRETSR 332

Query: 88  ----------KQRARKQRARKQ---------RARNKNVKSVKNAKNTKQQRQAKSHRDRE 128
                     K+ AR++RAR++         R R    +  + A    ++R+A+  R  E
Sbjct: 333 AEGEREREGTKKEARRKRARRKKETPTPDGPRPRRGITRPERQATRRAERRRAEKKRRTE 512



 Score = 28.5 bits (62), Expect = 1.1
 Identities = 22/88 (25%), Positives = 34/88 (38%)
 Frame = +2

Query: 11  NQKTENSSEILRDSCTNLHHRIDSTAIQSANSSPEVKNSSTDHGGRRRRQTGSAQRKEKK 70
           N   E S E  R   T       +   ++    P  K         R  +TG A+R   +
Sbjct: 443 NPPRETSDEARR---TQARREKTTNRARTKTKPPRKKTRQERSSAPRSGETGEARRNRAR 613

Query: 71  TEPKQHASKQHASKRARKQRARKQRARK 98
           +  K H +  HA +R   ++ R  RA+K
Sbjct: 614 STHKTHDT--HARERRGARKGRAGRAQK 691


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.308    0.118    0.310 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,574,245
Number of Sequences: 36976
Number of extensions: 35283
Number of successful extensions: 559
Number of sequences better than 10.0: 135
Number of HSP's better than 10.0 without gapping: 500
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 535
length of query: 150
length of database: 9,014,727
effective HSP length: 87
effective length of query: 63
effective length of database: 5,797,815
effective search space: 365262345
effective search space used: 365262345
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 54 (25.4 bits)


Medicago: description of AC147010.10