Medicago
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC147007.4 - phase: 0 
         (419 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC82149 weakly similar to PIR|H96695|H96695 hypothetical protein...   384  e-107
TC82275 similar to PIR|H96695|H96695 hypothetical protein F5A8.1...   268  4e-72
CB892842 similar to PIR|H96695|H966 hypothetical protein F5A8.10...   126  1e-29
BI263679                                                               97  9e-21
BI309637 similar to PIR|D86241|D86 protein T16B5.8 [imported] - ...    44  9e-05
TC93620 homologue to GP|12964610|dbj|BAB32671. pre-mRNA processi...    42  6e-04
TC82880 similar to GP|9858483|gb|AAG01054.1| resistance protein ...    38  0.008
TC82690 weakly similar to GP|9802755|gb|AAF99824.1| Unknown prot...    37  0.019
TC87984 weakly similar to GP|10177368|dbj|BAB10659. contains sim...    36  0.032
TC82802 similar to GP|9802755|gb|AAF99824.1| Unknown protein {Ar...    34  0.092
BG646112 weakly similar to GP|10177368|dbj contains similarity t...    34  0.12
TC78804                                                                34  0.12
AL380606                                                               33  0.20
BF649950 similar to GP|9802755|gb|A Unknown protein {Arabidopsis...    32  0.46
AW690594 similar to GP|23498163|emb hypothetical protein {Plasmo...    32  0.60
AL366325                                                               31  1.0
TC80786 similar to GP|20339360|gb|AAM19353.1 TIR-similar-domain-...    31  1.0
TC85351                                                                30  1.3
TC85666 homologue to SP|P10933|FENR_PEA Ferredoxin--NADP reducta...    30  2.3
TC86137 weakly similar to PIR|A96673|A96673 probable cytochrome ...    29  3.0

>TC82149 weakly similar to PIR|H96695|H96695 hypothetical protein F5A8.10
           [imported] - Arabidopsis thaliana, partial (63%)
          Length = 1225

 Score =  384 bits (987), Expect = e-107
 Identities = 193/273 (70%), Positives = 225/273 (81%)
 Frame = +3

Query: 1   MEDLPVEVVGIILSHLGSARDVLIASLTCKKWREAWQTHLQTLSFNTSDWPLYREICSSH 60
           M++LPVEV+G ILS LGSARDV+IASLTCKKWR+AW+ HL TL F T DWP+YRE+ SS 
Sbjct: 402 MDNLPVEVIGNILSLLGSARDVVIASLTCKKWRQAWRYHLHTLEFITFDWPVYRELSSST 581

Query: 61  LEMLITCTLFQTKGLQCLTIFMDDEHEFSVTPVIAWLMYTRDSLRELRYNVRTSPNFNII 120
           LE++IT T+FQTK L+CLTI MDD HEFS   VIAW MYTR+ LR L + V T P FNII
Sbjct: 582 LEIIITQTIFQTKALRCLTIKMDDVHEFSAASVIAWFMYTREDLRRLHFYVNTPPMFNII 761

Query: 121 EKCSRKTLEVLTLASNPISGVEPKYHKFPCLKSLSLSFVSISALDLSLLLSACPKLETLS 180
           EKC+R+ LEVL L  N I+ VEP Y KFPCLKSLSLSFVSISALDLSLLLS CP+LETL+
Sbjct: 762 EKCARQKLEVLVLGQNFITRVEPSYLKFPCLKSLSLSFVSISALDLSLLLSVCPRLETLA 941

Query: 181 IVCPEIAMSDSEASIELSSSSLKDFFVESYSFDKLILVADMLENLHLKDCSFDAFELINK 240
           +V PEIAMSDS+AS+ELSSSSLK+F VES+  DK +L AD+LE LHLKDC+F+ FE I K
Sbjct: 942 LVSPEIAMSDSQASMELSSSSLKEFSVESFGLDKFVLEADLLECLHLKDCTFEVFEFIGK 1121

Query: 241 GTLKVLKLDDVSVIHLDIGDNTENLEIVDVCNF 273
             LKVLK+DDVSVIHLDIG+N +NLE VD+ NF
Sbjct: 1122EGLKVLKVDDVSVIHLDIGENADNLEYVDISNF 1220


>TC82275 similar to PIR|H96695|H96695 hypothetical protein F5A8.10
           [imported] - Arabidopsis thaliana, partial (49%)
          Length = 751

 Score =  268 bits (684), Expect = 4e-72
 Identities = 133/208 (63%), Positives = 167/208 (79%)
 Frame = +1

Query: 1   MEDLPVEVVGIILSHLGSARDVLIASLTCKKWREAWQTHLQTLSFNTSDWPLYREICSSH 60
           M+ LPVEV+G ILSHL SARDV+IAS TCKKWR A   HL TLSF+++DW +YR++ ++ 
Sbjct: 127 MDQLPVEVIGNILSHLKSARDVVIASATCKKWRTACCKHLHTLSFSSNDWSVYRDLSTTR 306

Query: 61  LEMLITCTLFQTKGLQCLTIFMDDEHEFSVTPVIAWLMYTRDSLRELRYNVRTSPNFNII 120
           LE+LIT T+FQT GLQ L+I M+D  EFS + VIAWLMYTR++LR+L YNV+T PN NI+
Sbjct: 307 LEILITQTIFQTSGLQSLSILMEDVDEFSASAVIAWLMYTRETLRQLFYNVKTMPNVNIL 486

Query: 121 EKCSRKTLEVLTLASNPISGVEPKYHKFPCLKSLSLSFVSISALDLSLLLSACPKLETLS 180
           E C R  LE+L L  N I GVEP Y +FPCLKSLSLS VSISALDL+LL+SACP++E L 
Sbjct: 487 EICGRHKLEILDLEHNSIVGVEPNYQRFPCLKSLSLSCVSISALDLNLLVSACPRIEALE 666

Query: 181 IVCPEIAMSDSEASIELSSSSLKDFFVE 208
           +V PEIAMSD+  ++ELSSS+LK+ +VE
Sbjct: 667 LVNPEIAMSDAMVTVELSSSTLKNVYVE 750


>CB892842 similar to PIR|H96695|H966 hypothetical protein F5A8.10 [imported]
           - Arabidopsis thaliana, partial (23%)
          Length = 846

 Score =  126 bits (317), Expect = 1e-29
 Identities = 61/97 (62%), Positives = 77/97 (78%)
 Frame = +3

Query: 1   MEDLPVEVVGIILSHLGSARDVLIASLTCKKWREAWQTHLQTLSFNTSDWPLYREICSSH 60
           M+ LPVEV+G ILSHL SARDV+IAS TCKKWR A   HL TLSF+++DW +YR++ ++ 
Sbjct: 555 MDQLPVEVIGNILSHLKSARDVVIASATCKKWRTACCKHLHTLSFSSNDWSVYRDLSTTR 734

Query: 61  LEMLITCTLFQTKGLQCLTIFMDDEHEFSVTPVIAWL 97
           LE+LIT T+FQT GLQ L+I M+D  EFS + VIAWL
Sbjct: 735 LEILITQTIFQTSGLQSLSILMEDVDEFSASAVIAWL 845


>BI263679 
          Length = 482

 Score = 97.4 bits (241), Expect = 9e-21
 Identities = 45/45 (100%), Positives = 45/45 (100%)
 Frame = +3

Query: 375 KKMVIYGYVAEIKTHEECQTFTKFTEFMIQLGRKYSHIKFEFEYE 419
           KKMVIYGYVAEIKTHEECQTFTKFTEFMIQLGRKYSHIKFEFEYE
Sbjct: 12  KKMVIYGYVAEIKTHEECQTFTKFTEFMIQLGRKYSHIKFEFEYE 146


>BI309637 similar to PIR|D86241|D86 protein T16B5.8 [imported] - Arabidopsis
           thaliana, partial (28%)
          Length = 714

 Score = 44.3 bits (103), Expect = 9e-05
 Identities = 45/192 (23%), Positives = 85/192 (43%), Gaps = 10/192 (5%)
 Frame = +2

Query: 1   MEDLPVEVVGIILSHLGSARDVLIASLTCKKWREAWQTHLQTLSF--NTSDWPLYREICS 58
           +E LP  ++  ILSH+ + RDV   +   K+W+ +    +++L F  N  D   +RE   
Sbjct: 62  IESLPDVILQYILSHVSNGRDVAYCNCVSKRWKNS-MACIRSLYFTRNAFDNAPHRE--- 229

Query: 59  SHLEMLITCTLFQTKGLQCLTIFMDDEHEFSVTPVIAWLMYTRDSLRELRYNVRTSPNFN 118
            + ++++   +   + L+ L ++      FSV  + +WL     SL  L   +    +  
Sbjct: 230 -NSDIIVKRMVSAVERLEELVVYC----PFSVYGLASWLSLAGPSLSHLELRMDNLGDNE 394

Query: 119 IIEKCSRK--------TLEVLTLASNPISGVEPKYHKFPCLKSLSLSFVSISALDLSLLL 170
           II +   K         +E L L    I  + PK+  F  L+ L +    +    ++ ++
Sbjct: 395 IIHESPSKLDCIGAAVNVETLKLWGVLIKLI-PKWETFHNLRILEVVGARVEDAAVNAMI 571

Query: 171 SACPKLETLSIV 182
            ACP L  L ++
Sbjct: 572 QACPNLTRLLLL 607


>TC93620 homologue to GP|12964610|dbj|BAB32671. pre-mRNA processing 8
           protein {Mus musculus}, partial (1%)
          Length = 446

 Score = 41.6 bits (96), Expect = 6e-04
 Identities = 20/28 (71%), Positives = 22/28 (78%)
 Frame = +1

Query: 392 CQTFTKFTEFMIQLGRKYSHIKFEFEYE 419
           CQ   KFTEF+IQLGR+Y  IK EFEYE
Sbjct: 157 CQA--KFTEFIIQLGREYMDIKIEFEYE 234


>TC82880 similar to GP|9858483|gb|AAG01054.1| resistance protein MG55
           {Glycine max}, partial (46%)
          Length = 1238

 Score = 37.7 bits (86), Expect = 0.008
 Identities = 40/169 (23%), Positives = 71/169 (41%), Gaps = 8/169 (4%)
 Frame = +2

Query: 136 NPISGVEPKYHKFPCLKSLSLSFVSISALDLSLLLSACPKLETLSIVCPEIAMSDSEASI 195
           N ++ + P       L SL +   +++ +  S +LS+C KL ++S+ C      DSE  +
Sbjct: 749 NSVAHISPFGGMSKSLASLDIESNNLALVYQSQILSSCSKLRSVSVQC------DSEIQL 910

Query: 196 ELSSSSLKDFFVESYSFDKLILVADMLENLHLKDCSFDAFELINKGTLKVL------KLD 249
           +      + F  + Y  D  +    +    H+ D S  +  LI  G   ++       L 
Sbjct: 911 K---QEFRRFLDDLY--DAGLTELGISHASHISDHSLRSL-LIGMGNCHIVINILGKSLS 1072

Query: 250 DV--SVIHLDIGDNTENLEIVDVCNFIFMWQNFYNMISKASKLKKLRLW 296
            V     HL      EN+E+  +C F F W  F N +   S + ++ +W
Sbjct: 1073QVPSQSSHLIFYHY*ENMELCSICMFFFKW*RFIN-VHFYSSIYQILIW 1216


>TC82690 weakly similar to GP|9802755|gb|AAF99824.1| Unknown protein
           {Arabidopsis thaliana}, partial (12%)
          Length = 762

 Score = 36.6 bits (83), Expect = 0.019
 Identities = 49/190 (25%), Positives = 77/190 (39%), Gaps = 8/190 (4%)
 Frame = +1

Query: 1   MEDLPVEVVGIILSHLGSARDVLIASLTCKKWREAWQTHLQTLSFNT---SDWPLYREIC 57
           +  LP  ++  ILS L   ++ +  S+   KWR  W T L  L F++   SD      + 
Sbjct: 121 ISSLPGHIIDQILSIL-PIKEAVRTSILSTKWRYKWAT-LPNLVFDSQCISDTSEDLLVI 294

Query: 58  SSHLEMLITCTLFQTKGLQCLTIFMDDEHEFSVTPVIAWLMY-TRDSLRELRYNVRTSPN 116
            S L  +I   L    G       +       VT +  W ++ TR  ++E    +     
Sbjct: 295 KSKLSRIIDHVLLLHSG-PIKKFKLSHRELIGVTDIDRWTLHLTRRPVKEFVLEIWKGQR 471

Query: 117 FNI---IEKCSR-KTLEVLTLASNPISGVEPKYHKFPCLKSLSLSFVSISALDLSLLLSA 172
           + I   +  C     LE+      P S     +  F  LKSL L  V++S      L+S 
Sbjct: 472 YKIPSCLFSCQGLHHLELFNCWLIPPS----TFQGFRNLKSLDLQHVTLSQDAFENLIST 639

Query: 173 CPKLETLSIV 182
           CP LE L+++
Sbjct: 640 CPLLERLTLM 669


>TC87984 weakly similar to GP|10177368|dbj|BAB10659. contains similarity to
           heat shock transcription factor HSF30~gene_id:K16L22.13,
           partial (5%)
          Length = 696

 Score = 35.8 bits (81), Expect = 0.032
 Identities = 47/195 (24%), Positives = 77/195 (39%), Gaps = 14/195 (7%)
 Frame = +3

Query: 1   MEDLPVEVVGIILSHLGSARDVLIASLTCKKWREAWQTHLQTLSFNTSDWPLYRE----- 55
           +  LP  ++  ILS L +   V    L  +KWR  W+ +L+ L F  S  P   E     
Sbjct: 111 INQLPNSLLHHILSFLPTKTCVQTTPLVSRKWRNLWK-NLEALDFCDSSSPQIYEFDNDE 287

Query: 56  ---ICSSHLEMLITCTLFQTKGLQCLTIFMDDEHEFSVTPVIAWLMYT-RDSLRELRYNV 111
              I S  +  ++T    +     CL+ +      F    +  W+  T   +L E    +
Sbjct: 288 QFLIFSVFVNTVLTLRKSRVVRKFCLSCYHVQLDPFYNHSIDTWINATIGPNLEEFHLTL 467

Query: 112 RTSPNFNIIEKCSRKTLEVLTLASNPISGVEPKYHKFPCLKSLS-LSFVSISALDLSL-- 168
            T+  FN +         +++L+ N    ++ + +   CL SL  L  + +  LDL    
Sbjct: 468 LTAAGFNRVPLSLFSCPNLVSLSFNDYIILQLQDNSKICLPSLKLLQLLDMYNLDLKFCE 647

Query: 169 --LLSACPKLETLSI 181
                A P LE L I
Sbjct: 648 MPFSLAVPVLENLEI 692


>TC82802 similar to GP|9802755|gb|AAF99824.1| Unknown protein {Arabidopsis
           thaliana}, partial (50%)
          Length = 864

 Score = 34.3 bits (77), Expect = 0.092
 Identities = 32/111 (28%), Positives = 51/111 (45%), Gaps = 4/111 (3%)
 Frame = +3

Query: 1   MEDLPVEVVGIILSHLGSARDVLIASLTCKKWREAWQTHLQTLSFNTSDWP--LYREICS 58
           + DLP  ++  IL  L   RD +  S+  +KWR  W T  Q L F+   +P    RE+  
Sbjct: 138 ISDLPQSIIETILIQL-PIRDAVRTSILSRKWRYKWSTITQ-LVFDEKCYPNSTDREVVQ 311

Query: 59  SHLEMLITCTLFQTKGLQCLTIFMDDEHEFSVTPVI-AWLMY-TRDSLREL 107
             +   IT  LF  +G   +  F          P I  W+++ +R+ L++L
Sbjct: 312 KSVVEFITRLLFLHQG--PIHKFQIVNTSLQTCPAINQWILFLSRNDLKDL 458


>BG646112 weakly similar to GP|10177368|dbj contains similarity to heat shock
           transcription factor HSF30~gene_id:K16L22.13, partial
           (5%)
          Length = 742

 Score = 33.9 bits (76), Expect = 0.12
 Identities = 50/205 (24%), Positives = 83/205 (40%), Gaps = 26/205 (12%)
 Frame = +2

Query: 1   MEDLPVEVVGIILSHLGSARDVLIASLTCKKWREAWQTHLQTLSF------NTSDWPLYR 54
           M  LP  ++  ILS L +   V+  SL  ++WR  W+ HL    F      N  +   +R
Sbjct: 20  MSSLPDSLLCHILSFLPTKTSVMTTSLVSRRWRHLWE-HLNVFVFDDKSNCNCRNPKKFR 196

Query: 55  EICSSHLEMLITCTLFQTKGLQ--CLTIFMDDEHEFSVTPVIAWLMYT-RDSLRELRYNV 111
           +       +L   +L +++ ++   LT    D + F    V  W+       L +L  N+
Sbjct: 197 KFAFFVSSVL---SLRKSRHIRKFHLTCCTSDVYSFPGECVYMWVRAAIGPHLEDLSLNI 367

Query: 112 RTSPNFNIIEKCSRKTLEVLTLASNPISGV-----EPKYHKFPCLKSLSLSFVSIS-ALD 165
            T+ + + +       L    L S  + G+     +P    FP LK L + F  +   +D
Sbjct: 368 -TNCHGDDMVYLPPSLLNCTNLVSLSLFGLIHLKFQPSAIHFPSLKMLKVEFSILEHNID 544

Query: 166 LS-----------LLLSACPKLETL 179
           +            + LS CP LETL
Sbjct: 545 IEDFGKHLTDSILVFLSGCPVLETL 619


>TC78804 
          Length = 1318

 Score = 33.9 bits (76), Expect = 0.12
 Identities = 53/214 (24%), Positives = 87/214 (39%), Gaps = 14/214 (6%)
 Frame = +3

Query: 26  SLTCKKWREAWQTHLQTLSFNT---SDWPLYREICSSHLEMLITCTLFQTKGLQCLTIFM 82
           S+    WR  W T L  L F+    S+      +  S L  +I   L    G   +  F 
Sbjct: 21  SILSTNWRYKWTT-LPNLVFDNECLSETSKDLLVIKSKLSRIIDHVLLLRSGP--IKKFK 191

Query: 83  DDEHEFSVTPVIAWLMY-TRDSLRELRYNVRTSPNFNI-----IEKC-SRKTLEVLTLAS 135
                  VT +  W +Y TR  ++E    +  +P+        +  C S   LE+L    
Sbjct: 192 LSRDHIDVTDIDRWTLYLTRWQVKEFVLEIWKNPDQRYKIPSWLFSCQSLHHLELLECWL 371

Query: 136 NPISGVEPKYHKFPCLKSLSLSFVSISALDLSLLLSACPKLETLSIVCPEIAMSDSEASI 195
            P S     +  F  LKSL L +V+++   +  L+S+C  LE L ++       D   ++
Sbjct: 372 IPPS----TFQGFKNLKSLDLQYVTLTKDAVENLISSCLMLERLILM-----ECDGFKNL 524

Query: 196 ELSSSSLKDFFV----ESYSFDKLILVADMLENL 225
            + + +L+ F +    E  SF     +AD+  NL
Sbjct: 525 NIHAPNLQYFLMEGKFEDISFKNTSQLADVFINL 626


>AL380606 
          Length = 437

 Score = 33.1 bits (74), Expect = 0.20
 Identities = 17/36 (47%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
 Frame = +1

Query: 147 KFPCLKSLSLSFVSISAL-DLSLLLSACPKLETLSI 181
           +FP LK+LSL  +  S + D  LLL+ CP LE L +
Sbjct: 274 EFPSLKTLSLRLIKFSEVRDFMLLLAGCPILEDLHV 381


>BF649950 similar to GP|9802755|gb|A Unknown protein {Arabidopsis thaliana},
           partial (7%)
          Length = 581

 Score = 32.0 bits (71), Expect = 0.46
 Identities = 30/97 (30%), Positives = 46/97 (46%), Gaps = 2/97 (2%)
 Frame = +2

Query: 87  EFSVTPVIAWLMY-TRDSLRELRYNVRTSPNFNIIEKCSRKTLEVLTLASNPISGVEPKY 145
           E  V+ V  W++Y +R S++EL  +V T   + I   C      +  L  +      P  
Sbjct: 206 ESLVSDVDQWILYLSRKSIKELVLDVCTEELYKI-PWCLFSCQSLHHLKLHFCCLKPPTL 382

Query: 146 HK-FPCLKSLSLSFVSISALDLSLLLSACPKLETLSI 181
            K F  LKSL L+ V+++      L+S CP LE L +
Sbjct: 383 FKGFRSLKSLDLNHVAVAQDAFENLISGCPLLEKLKL 493


>AW690594 similar to GP|23498163|emb hypothetical protein {Plasmodium
           falciparum 3D7}, partial (10%)
          Length = 633

 Score = 31.6 bits (70), Expect = 0.60
 Identities = 18/46 (39%), Positives = 24/46 (52%)
 Frame = +3

Query: 4   LPVEVVGIILSHLGSARDVLIASLTCKKWREAWQTHLQTLSFNTSD 49
           LP  ++  ILS L +   V   SL  +KWR  W+  LQ  +F  SD
Sbjct: 270 LPDPLLLHILSFLPTRTSVATMSLASRKWRNLWE-QLQVFNFKDSD 404


>AL366325 
          Length = 195

 Score = 30.8 bits (68), Expect = 1.0
 Identities = 17/32 (53%), Positives = 19/32 (59%)
 Frame = +3

Query: 1  MEDLPVEVVGIILSHLGSARDVLIASLTCKKW 32
          ME LP EVV  ILS L S R++L     CK W
Sbjct: 36 MEHLPQEVVSNILSRLPS-RELLKCKFVCKSW 128


>TC80786 similar to GP|20339360|gb|AAM19353.1 TIR-similar-domain-containing
           protein TSDC {Pisum sativum}, partial (20%)
          Length = 831

 Score = 30.8 bits (68), Expect = 1.0
 Identities = 15/52 (28%), Positives = 21/52 (39%)
 Frame = +1

Query: 34  EAWQTHLQTLSFNTSDWPLYREICSSHLEMLITCTLFQTKGLQCLTIFMDDE 85
           E W+  L  L  +T+ W ++            T +LFQ         FMDDE
Sbjct: 277 EEWEKSLHNLRHSTAQWQMFLSFRGEDTRYSFTGSLFQALSQGGFKTFMDDE 432


>TC85351 
          Length = 720

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 14/25 (56%), Positives = 15/25 (60%)
 Frame = -3

Query: 351 LGWTTISDLFSVWVAGLLEGCPNLK 375
           LGW  +   F VWV G LEG PN K
Sbjct: 637 LGWQMMEH-FPVWVVGFLEGWPNCK 566


>TC85666 homologue to SP|P10933|FENR_PEA Ferredoxin--NADP reductase  leaf
           isozyme  chloroplast precursor (EC 1.18.1.2) (FNR).
           [Garden pea], partial (96%)
          Length = 1389

 Score = 29.6 bits (65), Expect = 2.3
 Identities = 16/49 (32%), Positives = 27/49 (54%)
 Frame = +3

Query: 284 ISKASKLKKLRLWSVVFDDEDEVVDIETISVCFPRLTHLSLSYDLKDGV 332
           I K  K  KLRL+S+      +  D +T+S+C  RL + + + ++  GV
Sbjct: 477 IDKNGKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNDAGEVVKGV 623


>TC86137 weakly similar to PIR|A96673|A96673 probable cytochrome P450
           F13O11.25 [imported] - Arabidopsis thaliana, partial
           (69%)
          Length = 1695

 Score = 29.3 bits (64), Expect = 3.0
 Identities = 25/87 (28%), Positives = 38/87 (42%), Gaps = 4/87 (4%)
 Frame = +1

Query: 98  MYTRDSLRELRYNVRTSPNFNIIEKCSRKTLEVLTLASNPISGVEPKYH----KFPCLKS 153
           +YT  S +    +   SPN N+  K S   +  + L+S  IS ++  +      +P + S
Sbjct: 169 LYTSPSSQTSNCSKNQSPNLNLFSKLS---MPNMVLSSLSISVLDLPFSLTTILWPTMFS 339

Query: 154 LSLSFVSISALDLSLLLSACPKLETLS 180
                 S+ AL L LL   CP   T S
Sbjct: 340 FKTHPSSLIALQLFLLPKCCPATNTTS 420


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.323    0.138    0.414 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,262,860
Number of Sequences: 36976
Number of extensions: 244969
Number of successful extensions: 1287
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 1263
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1281
length of query: 419
length of database: 9,014,727
effective HSP length: 99
effective length of query: 320
effective length of database: 5,354,103
effective search space: 1713312960
effective search space used: 1713312960
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 60 (27.7 bits)


Medicago: description of AC147007.4