BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC147001.5 + phase: 0 /pseudo
(308 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC88819 similar to GP|9758951|dbj|BAB09338.1 serine/threonine-sp... 441 e-144
TC79829 similar to GP|20146232|dbj|BAB89014. similar to receptor... 201 4e-52
TC92229 similar to PIR|B86369|B86369 hypothetical protein AAC980... 197 6e-51
TC78778 weakly similar to PIR|S71277|S71277 serine/threonine-spe... 195 2e-50
TC78806 similar to GP|8978273|dbj|BAA98164.1 receptor protein ki... 195 2e-50
TC83862 similar to PIR|T05270|T05270 probable serine/threonine-s... 194 3e-50
TC90232 weakly similar to PIR|T45697|T45697 hypothetical protein... 146 3e-49
TC87048 similar to GP|8778594|gb|AAF79602.1| F5M15.3 {Arabidopsi... 191 4e-49
TC86901 similar to GP|13937147|gb|AAK50067.1 AT5g13160/T19L5_120... 191 4e-49
TC87606 similar to PIR|C84473|C84473 probable protein kinase [im... 190 7e-49
TC77448 SYMRK; MtSYMRK [Medicago truncatula]; nod region linked ... 189 2e-48
TC88105 similar to GP|21593085|gb|AAM65034.1 Putative protein ki... 189 2e-48
NP496346 NP496346|AJ418371.1|CAD10810.1 nod region linked recept... 189 2e-48
TC87314 similar to PIR|T00848|T00848 probable serine/threonine-s... 186 7e-48
TC90272 similar to PIR|T45686|T45686 receptor-like protein kinas... 184 4e-47
TC79005 similar to GP|19423982|gb|AAL87287.1 putative protein ki... 183 8e-47
TC82398 similar to PIR|T45686|T45686 receptor-like protein kinas... 182 1e-46
TC86487 similar to PIR|C84473|C84473 probable protein kinase [im... 161 3e-46
TC78270 similar to GP|16649103|gb|AAL24403.1 Unknown protein {Ar... 179 1e-45
TC79033 similar to GP|21554229|gb|AAM63304.1 somatic embryogenes... 178 3e-45
>TC88819 similar to GP|9758951|dbj|BAB09338.1 serine/threonine-specific
protein kinase-like protein {Arabidopsis thaliana},
partial (86%)
Length = 1231
Score = 441 bits (1133), Expect(2) = e-144
Identities = 218/218 (100%), Positives = 218/218 (100%)
Frame = +1
Query: 1 MSTGETVAVKVLATNSKQGEKEFHTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVYMSK 60
MSTGETVAVKVLATNSKQGEKEFHTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVYMSK
Sbjct: 451 MSTGETVAVKVLATNSKQGEKEFHTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVYMSK 630
Query: 61 GNLASHLYSEENGNLGWDLRVHIALDVARGLEYLHDGAVPPVIHRDIKSNNILLDQSMRA 120
GNLASHLYSEENGNLGWDLRVHIALDVARGLEYLHDGAVPPVIHRDIKSNNILLDQSMRA
Sbjct: 631 GNLASHLYSEENGNLGWDLRVHIALDVARGLEYLHDGAVPPVIHRDIKSNNILLDQSMRA 810
Query: 121 RVADFGLSREEMVDKHAAIRGTFGYLDPEYISSGTFTKKSDVYSFGVLLFELIAGRNPQQ 180
RVADFGLSREEMVDKHAAIRGTFGYLDPEYISSGTFTKKSDVYSFGVLLFELIAGRNPQQ
Sbjct: 811 RVADFGLSREEMVDKHAAIRGTFGYLDPEYISSGTFTKKSDVYSFGVLLFELIAGRNPQQ 990
Query: 181 GLMEHVELAAMNSEGKVGWEEIVDSKLEGKCDFQEVNE 218
GLMEHVELAAMNSEGKVGWEEIVDSKLEGKCDFQEVNE
Sbjct: 991 GLMEHVELAAMNSEGKVGWEEIVDSKLEGKCDFQEVNE 1104
Score = 88.2 bits (217), Expect(2) = e-144
Identities = 42/43 (97%), Positives = 43/43 (99%)
Frame = +2
Query: 218 EVAALAYRCINRSPRKRPSMRDIVQVLTRILKARHQRNHHKKS 260
+VAALAYRCINRSPRKRPSMRDIVQVLTRILKARHQRNHHKKS
Sbjct: 1103 KVAALAYRCINRSPRKRPSMRDIVQVLTRILKARHQRNHHKKS 1231
>TC79829 similar to GP|20146232|dbj|BAB89014. similar to receptor protein
kinase {Oryza sativa (japonica cultivar-group)}, partial
(40%)
Length = 1736
Score = 201 bits (510), Expect = 4e-52
Identities = 113/256 (44%), Positives = 155/256 (60%), Gaps = 9/256 (3%)
Frame = +2
Query: 1 MSTGETVAVKVLATNSKQGEKEFHTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVYMSK 60
+S G VA+K S QGEKEF TE+ LL RLHHRNLV+L+GYC E+G+ MLVY YM
Sbjct: 443 ISGGTAVAIKRAQEGSLQGEKEFLTEISLLSRLHHRNLVSLIGYCDEEGEQMLVYEYMPN 622
Query: 61 GNLASHLYSEENGNLGWDLRVHIALDVARGLEYLHDGAVPPVIHRDIKSNNILLDQSMRA 120
G L HL L + +R+ IAL A+GL YLH+ A PP+ HRD+K++NILLD + A
Sbjct: 623 GTLRDHLSVSAKEPLTFIMRLKIALGSAKGLMYLHNEADPPIFHRDVKASNILLDSKLSA 802
Query: 121 RVADFGLSR-------EEMVDKHAA--IRGTFGYLDPEYISSGTFTKKSDVYSFGVLLFE 171
+VADFGLSR E +V H + ++GT GYLDPEY + T KSDVYS GV+ E
Sbjct: 803 KVADFGLSRLAPVPDMEGIVPGHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLE 982
Query: 172 LIAGRNPQQGLMEHVELAAMNSEGKVGWEEIVDSKLEGKCDFQEVNEVAALAYRCINRSP 231
++ G +P V ++ + V + I+D ++ G + V + LA +C+N P
Sbjct: 983 ILTGMHPISHGKNIVREVNLSYQSGVIF-SIIDERM-GSYPSEHVEKFLTLALKCVNDEP 1156
Query: 232 RKRPSMRDIVQVLTRI 247
RP+M ++V+ L I
Sbjct: 1157DNRPTMAEVVRELENI 1204
>TC92229 similar to PIR|B86369|B86369 hypothetical protein AAC98010.1
[imported] - Arabidopsis thaliana, partial (44%)
Length = 1347
Score = 197 bits (500), Expect = 6e-51
Identities = 108/255 (42%), Positives = 150/255 (58%), Gaps = 11/255 (4%)
Frame = +2
Query: 1 MSTGETVAVKVLATNSKQGEKEFHTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVYMSK 60
M G A+K+L S QGE+EF EV + R+HHR+LV+L+GYC + Q +L+Y ++
Sbjct: 251 MPDGRVGALKLLKAGSGQGEREFRAEVDTISRVHHRHLVSLIGYCIAEQQRVLIYEFVPN 430
Query: 61 GNLASHLYSEENGNLGWDLRVHIALDVARGLEYLHDGAVPPVIHRDIKSNNILLDQSMRA 120
GNL HL+ + L W R+ IA+ ARGL YLH+G P +IHRDIKS+NILLD S A
Sbjct: 431 GNLDQHLHESQWNVLDWPKRMKIAIGAARGLAYLHEGCNPKIIHRDIKSSNILLDDSYEA 610
Query: 121 RVADFGLSR-EEMVDKHAAIR--GTFGYLDPEYISSGTFTKKSDVYSFGVLLFELIAGRN 177
+VADFGL+R + + H + R GTFGY+ PEY +SG T +SDV+SFGV+L EL+ GR
Sbjct: 611 QVADFGLARLTDDTNTHVSTRVMGTFGYMAPEYATSGKLTDRSDVFSFGVVLLELVTGRK 790
Query: 178 P--------QQGLMEHVELAAMNSEGKVGWEEIVDSKLEGKCDFQEVNEVAALAYRCINR 229
P + L+E + + + E+ D +L + E+ + A CI
Sbjct: 791 PVDPTQPVGDESLVEWARPILLRAIETGDFSELADPRLHRQYIDSEMFRMIEAAAACIRH 970
Query: 230 SPRKRPSMRDIVQVL 244
S KRP M I + L
Sbjct: 971 SAPKRPRMVQIARAL 1015
>TC78778 weakly similar to PIR|S71277|S71277 serine/threonine-specific
receptor protein kinase (EC 2.7.1.-) - Arabidopsis
thaliana, partial (23%)
Length = 1808
Score = 195 bits (496), Expect = 2e-50
Identities = 106/271 (39%), Positives = 157/271 (57%), Gaps = 22/271 (8%)
Frame = +3
Query: 1 MSTGETVAVKVLATNSKQGEKEFHTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVYMSK 60
M G VAVK+L+ +S QG KEF TE LL +HH+NLV+ +GYC E + L+Y +M+
Sbjct: 783 MKDGNKVAVKMLSASSAQGPKEFQTEAELLMTVHHKNLVSFIGYCDEGDKMALIYEFMAN 962
Query: 61 GNLASHLYSEENGNLGWDLRVHIALDVARGLEYLHDGAVPPVIHRDIKSNNILLDQSMRA 120
GNL +L + + L W+ R+ IA+D A GL+YLH G PP+IHRD+KS NILL++ + A
Sbjct: 963 GNLKENLSEKSSHCLSWERRLQIAIDAAEGLDYLHHGCKPPIIHRDVKSANILLNEDLEA 1142
Query: 121 RVADFGLSR----------------EEMVDKHAAIRGTFGYLDPEYISSGTFTKKSDVYS 164
++ADFGLS+ ++ + +AI GT GYLDPEY T +KSD+YS
Sbjct: 1143 KIADFGLSKVFKNSDIQNADSTLIHVDVSGEKSAIMGTMGYLDPEYYKLQTLNEKSDIYS 1322
Query: 165 FGVLLFELIAG------RNPQQGLMEHVELAAMNSEGKVGWEEIVDSKLEGKCDFQEVNE 218
+G++L ELI G P + ++E V K +++D +LEGK D +
Sbjct: 1323 YGIVLLELITGLPAVIKGKPSKHILEFVRPRL----NKDDLSKVIDPRLEGKFDVSSGWK 1490
Query: 219 VAALAYRCINRSPRKRPSMRDIVQVLTRILK 249
V LA C + +RP+M ++ L + ++
Sbjct: 1491 VLGLAIACTASTSIQRPTMSVVLAELKQCVR 1583
>TC78806 similar to GP|8978273|dbj|BAA98164.1 receptor protein kinase-like
{Arabidopsis thaliana}, partial (28%)
Length = 1962
Score = 195 bits (495), Expect = 2e-50
Identities = 110/256 (42%), Positives = 149/256 (57%), Gaps = 7/256 (2%)
Frame = +2
Query: 1 MSTGETVAVKVLATNSKQGEKEFHTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVYMSK 60
+ TGE VA+K S QG EF TE+ LL R+HH+NLV+LVG+C EKG+ MLVY Y+
Sbjct: 632 LPTGELVAIKRAGKESMQGAVEFKTEIELLSRVHHKNLVSLVGFCYEKGEQMLVYEYVPN 811
Query: 61 GNLASHLYSEENGNLGWDLRVHIALDVARGLEYLHDGAVPPVIHRDIKSNNILLDQSMRA 120
G L L + + W R+ + L ARGL YLH+ A PP+IHRDIKS+NILLD + A
Sbjct: 812 GTLLDSLSRKSGIWMDWIRRLKVTLGAARGLTYLHELADPPIIHRDIKSSNILLDNHLIA 991
Query: 121 RVADFGLSR----EEMVDKHAAIRGTFGYLDPEYISSGTFTKKSDVYSFGVLLFELIAGR 176
+VADFGLS+ E ++GT GYLDPEY + T+KSDVYSFGVL+ EL R
Sbjct: 992 KVADFGLSKLLVDSERGHVTTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELATSR 1171
Query: 177 NP-QQG--LMEHVELAAMNSEGKVGWEEIVDSKLEGKCDFQEVNEVAALAYRCINRSPRK 233
P +QG ++ V S+ I+D L + + LA RC+ +
Sbjct: 1172KPIEQGKYIVREVMRVMDTSKELYNLHSILDQSLLKGTRPKGLERYVELALRCVKEYAAE 1351
Query: 234 RPSMRDIVQVLTRILK 249
RPSM ++ + + I++
Sbjct: 1352RPSMAEVAKEIESIIE 1399
>TC83862 similar to PIR|T05270|T05270 probable serine/threonine-specific
protein kinase (EC 2.7.1.-) T4L20.80 - Arabidopsis
thaliana, partial (60%)
Length = 948
Score = 194 bits (494), Expect = 3e-50
Identities = 109/253 (43%), Positives = 150/253 (59%), Gaps = 9/253 (3%)
Frame = +1
Query: 1 MSTGETVAVKVLATNSKQGEKEFHTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVYMSK 60
+ G VAVK L N Q EKEF EV +G++ H+NLV LVGYCAE + MLVY Y+
Sbjct: 106 LQDGSIVAVKNLLNNKGQAEKEFKVEVEAIGKVRHKNLVGLVGYCAEGAKRMLVYEYVDN 285
Query: 61 GNLASHLYSEEN--GNLGWDLRVHIALDVARGLEYLHDGAVPPVIHRDIKSNNILLDQSM 118
GNL L+ + L WD+R+ IA+ A+GL YLH+G P V+HRD+KS+NILLD+
Sbjct: 286 GNLEQWLHGDVGPVSPLTWDIRMKIAVGTAKGLAYLHEGLEPKVVHRDVKSSNILLDKKW 465
Query: 119 RARVADFGLSREEMVDKH---AAIRGTFGYLDPEYISSGTFTKKSDVYSFGVLLFELIAG 175
A+V+DFGL++ K + GTFGY+ PEY S+G + SDVYSFG+LL EL+ G
Sbjct: 466 HAKVSDFGLAKLLGSGKSYVTTRVMGTFGYVSPEYASTGMLNEGSDVYSFGILLMELVTG 645
Query: 176 RNPQQGLMEHVELAAMN-SEGKVG---WEEIVDSKLEGKCDFQEVNEVAALAYRCINRSP 231
R+P E+ ++ +G V EE+VD +E + + + + RCI+
Sbjct: 646 RSPIDYSRAPAEMNLVDWFKGMVASRRGEELVDPLIEIQPSPRSLKRALLVCLRCIDLDA 825
Query: 232 RKRPSMRDIVQVL 244
KRP M IV +L
Sbjct: 826 NKRPKMGQIVHML 864
>TC90232 weakly similar to PIR|T45697|T45697 hypothetical protein F18L15.120
- Arabidopsis thaliana, partial (26%)
Length = 1272
Score = 146 bits (369), Expect(2) = 3e-49
Identities = 69/132 (52%), Positives = 96/132 (72%), Gaps = 2/132 (1%)
Frame = +3
Query: 7 VAVKVLATNSKQGEKEFHTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVYMSKGNLASH 66
VAVK+L+ +S QG KEF +E LL +HHRNLV+L+GYC E L+Y YM+ GNL H
Sbjct: 408 VAVKMLSPSSMQGYKEFQSEAQLLAIVHHRNLVSLIGYCDEGEIKALIYEYMANGNLQQH 587
Query: 67 LYSEENGNLGWDLRVHIALDVARGLEYLHDGAVPPVIHRDIKSNNILLDQSMRARVADFG 126
L+ E + L W+ R++IA+D A+GL+Y+H+G PP++HRD+K +NILLD +M A+++DFG
Sbjct: 588 LFVENSNILNWNERLNIAVDAAQGLDYMHNGCKPPILHRDLKPSNILLDDNMHAKISDFG 767
Query: 127 LSRE--EMVDKH 136
LSR VD H
Sbjct: 768 LSRAFGNDVDSH 803
Score = 66.2 bits (160), Expect(2) = 3e-49
Identities = 41/112 (36%), Positives = 59/112 (52%), Gaps = 4/112 (3%)
Frame = +1
Query: 141 GTFGYLDPEYISSGTFTKKSDVYSFGVLLFELIAGR---NPQQGLMEHV-ELAAMNSEGK 196
GT GY DPEY +G KK+D+YSFG++LFELI G+ G H+ E EG
Sbjct: 823 GTLGYADPEYQRTGNTNKKNDIYSFGIILFELITGQKALTKASGENLHILEWVIPIVEGG 1002
Query: 197 VGWEEIVDSKLEGKCDFQEVNEVAALAYRCINRSPRKRPSMRDIVQVLTRIL 248
+ +VDS+L+G+ +V +A C + +RP M +I+ L L
Sbjct: 1003-DIQNVVDSRLQGEFSINSAWKVVEIAMSCTSPDVVERPDMSEILVELKECL 1155
>TC87048 similar to GP|8778594|gb|AAF79602.1| F5M15.3 {Arabidopsis
thaliana}, partial (77%)
Length = 1571
Score = 191 bits (484), Expect = 4e-49
Identities = 109/255 (42%), Positives = 152/255 (58%), Gaps = 11/255 (4%)
Frame = +1
Query: 1 MSTGETVAVKVLATNSKQGEKEFHTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVYMSK 60
+STGE VAVK L+ + +QG +EF TEV++L LHH NLV L+GYC + Q +LVY YM
Sbjct: 523 LSTGELVAVKQLSHDGRQGFQEFVTEVLMLSLLHHSNLVKLIGYCTDGDQRLLVYEYMPM 702
Query: 61 GNLASHLYS--EENGNLGWDLRVHIALDVARGLEYLHDGAVPPVIHRDIKSNNILLDQSM 118
G+L HL+ ++ L W R+ IA+ ARGLEYLH A PPVI+RD+KS NILLD
Sbjct: 703 GSLEDHLFDLPQDKEPLSWSSRMKIAVGAARGLEYLHCKADPPVIYRDLKSANILLDSDF 882
Query: 119 RARVADFGLSREEMV--DKHAAIR--GTFGYLDPEYISSGTFTKKSDVYSFGVLLFELIA 174
+++DFGL++ V + H + R GT+GY PEY SG T KSD+YSFGV+L ELI
Sbjct: 883 SPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 1062
Query: 175 GR-----NPQQGLMEHVELAAMNSEGKVGWEEIVDSKLEGKCDFQEVNEVAALAYRCINR 229
GR + + G V + + + + D L+G + +++ A+ C+
Sbjct: 1063GRRAIDASKKPGEQNLVSWSRPYFSDRRKFVHMADPLLQGHFPVRCLHQAIAITAMCLQE 1242
Query: 230 SPRKRPSMRDIVQVL 244
P+ RP + DIV L
Sbjct: 1243QPKFRPLIGDIVVAL 1287
>TC86901 similar to GP|13937147|gb|AAK50067.1 AT5g13160/T19L5_120
{Arabidopsis thaliana}, partial (83%)
Length = 2028
Score = 191 bits (484), Expect = 4e-49
Identities = 110/266 (41%), Positives = 154/266 (57%), Gaps = 11/266 (4%)
Frame = +1
Query: 2 STGETVAVKVLATNSKQGEKEFHTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVYMSKG 61
+TG+ VAVK L N QG +EF EV++L LH NLV+L+GYCA+ Q +LVY +M G
Sbjct: 592 TTGQAVAVKQLDRNGLQGNREFLVEVLMLSLLHSPNLVSLIGYCADGDQRLLVYEFMPLG 771
Query: 62 NLASHLYS--EENGNLGWDLRVHIALDVARGLEYLHDGAVPPVIHRDIKSNNILLDQSMR 119
+L HL+ + L W+ R+ IA A+GLEYLHD A PPVI+RD KS+NILLD+
Sbjct: 772 SLEDHLHDLPADKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLDEGYH 951
Query: 120 ARVADFGLSREEMV-DK-HAAIR--GTFGYLDPEYISSGTFTKKSDVYSFGVLLFELIAG 175
+++DFGL++ V DK H + R GT+GY PEY +G T KSDVYSFGV+ ELI G
Sbjct: 952 PKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITG 1131
Query: 176 RNPQQGLMEH-----VELAAMNSEGKVGWEEIVDSKLEGKCDFQEVNEVAALAYRCINRS 230
R H V A + + ++ D +L+G+ + + + A+A CI
Sbjct: 1132RKAIDSTRPHGEQNLVTWARPLFNDRRKFSKLADPRLQGRYPMRGLYQALAVASMCIQEQ 1311
Query: 231 PRKRPSMRDIVQVLTRILKARHQRNH 256
RP + D+V L+ + H N+
Sbjct: 1312AAARPLIGDVVTALSYLANQAHDTNN 1389
>TC87606 similar to PIR|C84473|C84473 probable protein kinase [imported] -
Arabidopsis thaliana, partial (69%)
Length = 1803
Score = 190 bits (482), Expect = 7e-49
Identities = 106/252 (42%), Positives = 161/252 (63%), Gaps = 12/252 (4%)
Frame = +3
Query: 5 ETVAVKVLATNSKQGEKEFHTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVYMSKGNLA 64
++VAVK+L SKQG KE+ TEV++LG+L +LV L+GYC E +LVY Y+ +G+L
Sbjct: 579 QSVAVKLLDLESKQGHKEWLTEVVVLGQLRDPHLVKLIGYCIEDEHRLLVYEYLPRGSLE 758
Query: 65 SHLYSEENGNLGWDLRVHIALDVARGLEYLHDGAVPPVIHRDIKSNNILLDQSMRARVAD 124
+ L+ + +L W R+ IA+ A+GL +LH+ A PVI RD K++NILLD A+++D
Sbjct: 759 NQLFRRFSASLPWSTRMKIAVGAAKGLAFLHE-AEQPVIFRDFKASNILLDSDYNAKLSD 935
Query: 125 FGLSRE--EMVDKHAAIR--GTFGYLDPEYISSGTFTKKSDVYSFGVLLFELIAGRNP-- 178
FGL+++ E D H + R GT GY PEY+ +G T KSDVYSFGV+L EL+ GR
Sbjct: 936 FGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLTAKSDVYSFGVVLLELLTGRKSVD 1115
Query: 179 ------QQGLMEHVELAAMNSEGKVGWEEIVDSKLEGKCDFQEVNEVAALAYRCINRSPR 232
+Q L++ ++S K+ +I+D KLEG+ + A+LAY+C++ P+
Sbjct: 1116KNRPQREQNLVDWARPMLIDSR-KI--SKIMDPKLEGQYSEMGAKKAASLAYQCLSHRPK 1286
Query: 233 KRPSMRDIVQVL 244
RP+M ++V++L
Sbjct: 1287SRPTMSNVVKIL 1322
>TC77448 SYMRK; MtSYMRK [Medicago truncatula]; nod region linked receptor
kinase [Medicago truncatula]
Length = 3568
Score = 189 bits (479), Expect = 2e-48
Identities = 114/275 (41%), Positives = 160/275 (57%), Gaps = 12/275 (4%)
Frame = +1
Query: 1 MSTGETVAVKVLATNSKQGEKEFHTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVYMSK 60
+ G+ VAVKV ++ S QG +EF E+ LL + H NLV L+GYC E Q +LVY +MS
Sbjct: 2215 LDDGQEVAVKVRSSTSTQGTREFDNELNLLSAIQHENLVPLLGYCNEYDQQILVYPFMSN 2394
Query: 61 GNLASHLYSEENGN--LGWDLRVHIALDVARGLEYLHDGAVPPVIHRDIKSNNILLDQSM 118
G+L LY E + L W R+ IAL ARGL YLH VIHRD+KS+NILLDQSM
Sbjct: 2395 GSLLDRLYGEASKRKILDWPTRLSIALGAARGLAYLHTFPGRSVIHRDVKSSNILLDQSM 2574
Query: 119 RARVADFGLSR--EEMVDKHAA--IRGTFGYLDPEYISSGTFTKKSDVYSFGVLLFELIA 174
A+VADFG S+ + D + + +RGT GYLDPEY + ++KSDV+SFGV+L E+++
Sbjct: 2575 CAKVADFGFSKYAPQEGDSYVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVS 2754
Query: 175 GRNPQQGLMEHVELAAMN------SEGKVGWEEIVDSKLEGKCDFQEVNEVAALAYRCIN 228
GR P +E + + KV +EIVD ++G + + V +A +C+
Sbjct: 2755 GREPLNIKRPRIEWSLVEWAKPYIRASKV--DEIVDPGIKGGYHAEALWRVVEVALQCLE 2928
Query: 229 RSPRKRPSMRDIVQVLTRILKARHQRNHHKKSLSA 263
RP M DIV+ L L + + + KS+ +
Sbjct: 2929 PYSTYRPCMVDIVRELEDALIIENNASEYMKSIDS 3033
>TC88105 similar to GP|21593085|gb|AAM65034.1 Putative protein kinase
{Arabidopsis thaliana}, partial (72%)
Length = 2379
Score = 189 bits (479), Expect = 2e-48
Identities = 102/254 (40%), Positives = 145/254 (56%), Gaps = 13/254 (5%)
Frame = +2
Query: 4 GETVAVKVLATNSKQGEKEFHTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVYMSKGNL 63
G VA+K L N Q EKEF EV +G + H+NLV L+G+C E +L+Y Y++ GNL
Sbjct: 791 GNPVAIKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGFCIEGTHRLLIYEYVNNGNL 970
Query: 64 ASHLYS--EENGNLGWDLRVHIALDVARGLEYLHDGAVPPVIHRDIKSNNILLDQSMRAR 121
L+ + G L WD R+ I L A+ L YLH+ P V+HRDIKS+NIL+D A+
Sbjct: 971 EQWLHGAMRQYGYLTWDARIKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDDFNAK 1150
Query: 122 VADFGLSREEMVDKH---AAIRGTFGYLDPEYISSGTFTKKSDVYSFGVLLFELIAGRNP 178
++DFGL++ K + GTFGY+ PEY +SG +KSDVYSFGVLL E I GR+P
Sbjct: 1151 ISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVLLLEAITGRDP 1330
Query: 179 --------QQGLMEHVELAAMNSEGKVGWEEIVDSKLEGKCDFQEVNEVAALAYRCINRS 230
+ L++ +++ N EE+VD +E + + V A RC++
Sbjct: 1331 VDYNRSAAEVNLVDWLKMMVGNRHA----EEVVDPNIETRPSTSALKRVLLTALRCVDPD 1498
Query: 231 PRKRPSMRDIVQVL 244
KRP M +V++L
Sbjct: 1499 SEKRPKMSQVVRML 1540
>NP496346 NP496346|AJ418371.1|CAD10810.1 nod region linked receptor kinase
[Medicago truncatula]
Length = 2706
Score = 189 bits (479), Expect = 2e-48
Identities = 114/275 (41%), Positives = 160/275 (57%), Gaps = 12/275 (4%)
Frame = +1
Query: 1 MSTGETVAVKVLATNSKQGEKEFHTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVYMSK 60
+ G+ VAVKV ++ S QG +EF E+ LL + H NLV L+GYC E Q +LVY +MS
Sbjct: 1771 LDDGQEVAVKVRSSTSTQGTREFDNELNLLSAIQHENLVPLLGYCNEYDQQILVYPFMSN 1950
Query: 61 GNLASHLYSEENGN--LGWDLRVHIALDVARGLEYLHDGAVPPVIHRDIKSNNILLDQSM 118
G+L LY E + L W R+ IAL ARGL YLH VIHRD+KS+NILLDQSM
Sbjct: 1951 GSLLDRLYGEASKRKILDWPTRLSIALGAARGLAYLHTFPGRSVIHRDVKSSNILLDQSM 2130
Query: 119 RARVADFGLSR--EEMVDKHAA--IRGTFGYLDPEYISSGTFTKKSDVYSFGVLLFELIA 174
A+VADFG S+ + D + + +RGT GYLDPEY + ++KSDV+SFGV+L E+++
Sbjct: 2131 CAKVADFGFSKYAPQEGDSYVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVS 2310
Query: 175 GRNPQQGLMEHVELAAMN------SEGKVGWEEIVDSKLEGKCDFQEVNEVAALAYRCIN 228
GR P +E + + KV +EIVD ++G + + V +A +C+
Sbjct: 2311 GREPLNIKRPRIEWSLVEWAKPYIRASKV--DEIVDPGIKGGYHAEALWRVVEVALQCLE 2484
Query: 229 RSPRKRPSMRDIVQVLTRILKARHQRNHHKKSLSA 263
RP M DIV+ L L + + + KS+ +
Sbjct: 2485 PYSTYRPCMVDIVRELEDALIIENNASEYMKSIDS 2589
>TC87314 similar to PIR|T00848|T00848 probable serine/threonine-specific
protein kinase T20F6.6 (EC 2.7.1.-) - Arabidopsis
thaliana, partial (80%)
Length = 1575
Score = 186 bits (473), Expect = 7e-48
Identities = 109/276 (39%), Positives = 158/276 (56%), Gaps = 20/276 (7%)
Frame = +1
Query: 3 TGETVAVKVLATNSKQGEKEFHTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVYMSKGN 62
+G VAVK L QG KE+ TEV LG+LHH NLV L+GYC E +LVY +M KG+
Sbjct: 526 SGMVVAVKRLKPEGYQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGS 705
Query: 63 LASHLYSEENGNLGWDLRVHIALDVARGLEYLHDGAVPPVIHRDIKSNNILLDQSMRARV 122
L +HL+ L W +R+ +A+ ARGL +LH+ A VI+RD K++NILLD +++
Sbjct: 706 LENHLFRRGPQPLSWSIRMKVAIGAARGLSFLHN-AKSQVIYRDFKASNILLDAEFNSKL 882
Query: 123 ADFGLSRE----EMVDKHAAIRGTFGYLDPEYISSGTFTKKSDVYSFGVLLFELIAGRNP 178
+DFGL++ + + GT GY PEY+++G T KSDVYSFGV++ EL++GR
Sbjct: 883 SDFGLAKAGPTGDRTHVSTQVVGTQGYAAPEYVATGRLTAKSDVYSFGVVMLELLSGRRA 1062
Query: 179 QQGLMEHVELAAMNSEGKVGWEE-----------IVDSKLEGKCDFQEVNEVAALAYRCI 227
+ V+ + V W + I+DSKLEG+ + A LA +C+
Sbjct: 1063VDKTIAGVD------QNLVDWAKPYLGDKRRLFRIMDSKLEGQYPQKGAFMAATLALQCL 1224
Query: 228 NRSPRKRPSMRDIVQVLTRILKARH-QRN----HHK 258
NR + RPSM +++ L +I +H RN HH+
Sbjct: 1225NREAKARPSMTEVLATLEQIEAPKHASRNSLSEHHR 1332
>TC90272 similar to PIR|T45686|T45686 receptor-like protein kinase homolog -
Arabidopsis thaliana, partial (58%)
Length = 941
Score = 184 bits (467), Expect = 4e-47
Identities = 107/243 (44%), Positives = 143/243 (58%), Gaps = 8/243 (3%)
Frame = +3
Query: 7 VAVKVLATNSKQGEKEFHTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVYMSKGNLASH 66
VA K S QG EF TE+ +L + HR+LV+L+GYC E+ + +L+Y YM G + SH
Sbjct: 6 VACKRGNPRSHQGLAEFRTEIEMLSQFRHRHLVSLIGYCDERNEMILIYEYMENGTVKSH 185
Query: 67 LYSEENGNLGWDLRVHIALDVARGLEYLHDGAVPPVIHRDIKSNNILLDQSMRARVADFG 126
LY +L W R+ I + ARGL YLH G VIHRD+KS NILLD+++ A+VADFG
Sbjct: 186 LYGSSLPSLSWKERLEICIGAARGLHYLHTGYAKAVIHRDVKSANILLDENLMAKVADFG 365
Query: 127 LSR--EEMVDKH--AAIRGTFGYLDPEYISSGTFTKKSDVYSFGVLLFELIAGRNPQQGL 182
LS+ E+ H A++G+FGYLDPEY T+KSDVYSFGV+L E++ R
Sbjct: 366 LSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLLEVLCARPVIDPS 545
Query: 183 M--EHVELA--AMNSEGKVGWEEIVDSKLEGKCDFQEVNEVAALAYRCINRSPRKRPSMR 238
+ E V LA AM + K IVD L GK + + A A +C+ RPSM
Sbjct: 546 LPRERVNLAEWAMKWQKKGELARIVDPTLAGKIRPDSLRKFAETAEKCLADFGVDRPSMG 725
Query: 239 DIV 241
D++
Sbjct: 726 DVL 734
>TC79005 similar to GP|19423982|gb|AAL87287.1 putative protein kinase
{Arabidopsis thaliana}, partial (70%)
Length = 1723
Score = 183 bits (464), Expect = 8e-47
Identities = 105/273 (38%), Positives = 153/273 (55%), Gaps = 9/273 (3%)
Frame = +3
Query: 7 VAVKVLATNSKQGEKEFHTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVYMSKGNLASH 66
VA+K L QG++E+ EV LG+ H NLV L GYC E +LVY YM+ +L H
Sbjct: 471 VAIKELNREGFQGDREWLAEVNYLGQFSHPNLVKLFGYCCEDEHRLLVYEYMASDSLEKH 650
Query: 67 LYSEENGNLGWDLRVHIALDVARGLEYLHDGAVPPVIHRDIKSNNILLDQSMRARVADFG 126
L+ L W R+ IAL ARGL +LH GA P+I+RD K++NILLD A+++DFG
Sbjct: 651 LFRRAGSTLTWSKRMKIALHAARGLAFLH-GAERPIIYRDFKTSNILLDADFNAKLSDFG 827
Query: 127 LSRE----EMVDKHAAIRGTFGYLDPEYISSGTFTKKSDVYSFGVLLFELIAGR---NPQ 179
L+++ + + GT+GY PEY+ +G T +SDVY FGV+L EL+ GR +
Sbjct: 828 LAKDGPMGDQTHVSTRVMGTYGYAAPEYVMTGHLTARSDVYGFGVVLLELLIGRRALDKS 1007
Query: 180 QGLMEH--VELAAMNSEGKVGWEEIVDSKLEGKCDFQEVNEVAALAYRCINRSPRKRPSM 237
+ EH VE A +I+D K+EG+ + +VA LAY+C++++P+ RP M
Sbjct: 1008RPSREHNLVEWARPLLNHNKKLLKILDPKVEGQYSSKTATKVALLAYQCLSQNPKSRPLM 1187
Query: 238 RDIVQVLTRILKARHQRNHHKKSLSATTDEVAI 270
+V++L + N K L + V I
Sbjct: 1188SQVVEILENF--QSKEENEEDKILQSGGSSVTI 1280
>TC82398 similar to PIR|T45686|T45686 receptor-like protein kinase homolog -
Arabidopsis thaliana, partial (44%)
Length = 764
Score = 182 bits (463), Expect = 1e-46
Identities = 103/215 (47%), Positives = 136/215 (62%), Gaps = 8/215 (3%)
Frame = +2
Query: 4 GETVAVKVLATNSKQGEKEFHTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVYMSKGNL 63
G VAVK S+QG EF TE+ +L + HR+LV+L+GYC E + +L+Y YM KG L
Sbjct: 41 GRKVAVKRGNPRSQQGIAEFRTEIEMLSQFRHRHLVSLIGYCDENNEMILIYEYMEKGTL 220
Query: 64 ASHLYSEENGNLGWDLRVHIALDVARGLEYLHDGAVPPVIHRDIKSNNILLDQSMRARVA 123
HLY +L W R+ I + ARGL YLH G VIHRD+KS NILLD+++ A+VA
Sbjct: 221 KGHLYGLGLPSLSWKERLDICIGSARGLHYLHTGYAKAVIHRDVKSANILLDENLMAKVA 400
Query: 124 DFGLSR--EEMVDKH--AAIRGTFGYLDPEYISSGTFTKKSDVYSFGVLLFELIAGRNPQ 179
DFGLS+ E+ H A++G+FGYLDPEY T+KSDVYSFGV+LFE++ R
Sbjct: 401 DFGLSKTGPELDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVI 580
Query: 180 QGLM--EHVELA--AMNSEGKVGWEEIVDSKLEGK 210
+ E V LA AM + K E+I+D+ L+GK
Sbjct: 581 DPSLPKEMVNLAEWAMKYQKKGQLEQIIDTALQGK 685
>TC86487 similar to PIR|C84473|C84473 probable protein kinase [imported] -
Arabidopsis thaliana, partial (75%)
Length = 2229
Score = 161 bits (407), Expect(2) = 3e-46
Identities = 84/176 (47%), Positives = 119/176 (66%), Gaps = 4/176 (2%)
Frame = +3
Query: 5 ETVAVKVLATNSKQGEKEFHTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVYMSKGNLA 64
+ VAVK+L + QG +E+ TEV+ LG+L H++LV L+GYC E+ +LVY Y+ +G+L
Sbjct: 741 QPVAVKLLDLDGTQGHREWLTEVVFLGQLRHQHLVKLIGYCCEEEHRLLVYEYLPRGSLE 920
Query: 65 SHLYSEENGNLGWDLRVHIALDVARGLEYLHDGAVPPVIHRDIKSNNILLDQSMRARVAD 124
+ L+ + +L W R+ IA+ A+GL +LHD A PVI+RD K +NILLD A+++D
Sbjct: 921 NQLFKRYSTSLPWSTRMKIAVGAAKGLAFLHD-AKKPVIYRDFKGSNILLDSDYNAKLSD 1097
Query: 125 FGLSRE--EMVDKHAAIR--GTFGYLDPEYISSGTFTKKSDVYSFGVLLFELIAGR 176
FGL+++ E D H + R GT GY PEYI +G T SDVYSFGV+L EL+ GR
Sbjct: 1098FGLAKDGPEGDDTHVSTRVMGTQGYAAPEYIMTGHLTAMSDVYSFGVVLLELLTGR 1265
Score = 41.6 bits (96), Expect(2) = 3e-46
Identities = 18/43 (41%), Positives = 27/43 (61%)
Frame = +1
Query: 202 IVDSKLEGKCDFQEVNEVAALAYRCINRSPRKRPSMRDIVQVL 244
I+D +LEG+ + AALAY+C++ PR RP+M +V L
Sbjct: 1357 IMDPRLEGQYSEMGARKAAALAYQCLSHRPRNRPTMSTVVNTL 1485
>TC78270 similar to GP|16649103|gb|AAL24403.1 Unknown protein {Arabidopsis
thaliana}, partial (80%)
Length = 1463
Score = 179 bits (454), Expect = 1e-45
Identities = 94/251 (37%), Positives = 149/251 (58%), Gaps = 9/251 (3%)
Frame = +3
Query: 4 GETVAVKVLATNSKQGEKEFHTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVYMSKGNL 63
G+ A+KVL+T SKQG KEF TE+ ++ + H NLV L G C E +LVY Y+ +L
Sbjct: 375 GKLAAIKVLSTESKQGVKEFLTEINVISEIKHENLVILYGCCVEGDHRILVYNYLENNSL 554
Query: 64 ASHLYSEENGNL--GWDLRVHIALDVARGLEYLHDGAVPPVIHRDIKSNNILLDQSMRAR 121
+ L + + N+ W R I L VARGL +LH+ +P ++HRDIK++NILLD+ + +
Sbjct: 555 SQTLLAGGHSNIYFDWQTRRRICLGVARGLAFLHEEVLPHIVHRDIKASNILLDKDLTPK 734
Query: 122 VADFGLSR---EEMVDKHAAIRGTFGYLDPEYISSGTFTKKSDVYSFGVLLFELIAGRNP 178
++DFGL++ M + GT GYL PEY G T+K+D+YSFGVLL E+++GR+
Sbjct: 735 ISDFGLAKLIPSYMTHVSTRVAGTIGYLAPEYAIRGQLTRKADIYSFGVLLVEIVSGRSN 914
Query: 179 QQGLMEHVELAAMNSEGKV----GWEEIVDSKLEGKCDFQEVNEVAALAYRCINRSPRKR 234
+ + + + ++ ++VD L G+ D +E ++ +A C +P+ R
Sbjct: 915 TNTRLPIADQYILETTWQLYERKELAQLVDISLNGEFDAEEACKILKIALLCTQDTPKLR 1094
Query: 235 PSMRDIVQVLT 245
P+M +V++LT
Sbjct: 1095PTMSSVVKMLT 1127
>TC79033 similar to GP|21554229|gb|AAM63304.1 somatic embryogenesis
receptor-like kinase putative {Arabidopsis thaliana},
partial (77%)
Length = 1762
Score = 178 bits (451), Expect = 3e-45
Identities = 97/250 (38%), Positives = 147/250 (58%), Gaps = 9/250 (3%)
Frame = +1
Query: 4 GETVAVKVLATNSKQGEKEFHTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVYMSKGNL 63
G +AVK L S + + EF EV +L R+ H+NL++L GYCAE + ++VY YM +L
Sbjct: 529 GSQIAVKRLKVWSNKADMEFAVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNLSL 708
Query: 64 ASHLYSEENGN--LGWDLRVHIALDVARGLEYLHDGAVPPVIHRDIKSNNILLDQSMRAR 121
SHL+ + + L W+ R++IA+ A G+ YLH A P +IHRD+K++N+LLD +AR
Sbjct: 709 LSHLHGQHSTESLLDWNRRMNIAIGSAEGIVYLHVQATPHIIHRDVKASNVLLDSDFQAR 888
Query: 122 VADFGLSR---EEMVDKHAAIRGTFGYLDPEYISSGTFTKKSDVYSFGVLLFELIAGRNP 178
VADFG ++ + ++GT GYL PEY G + DVYSFG+LL EL +G+ P
Sbjct: 889 VADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKANESCDVYSFGILLLELASGKKP 1068
Query: 179 QQGLMEHVELA----AMNSEGKVGWEEIVDSKLEGKCDFQEVNEVAALAYRCINRSPRKR 234
+ L V+ A A+ + + E+ D +L G +E+ V +A C P KR
Sbjct: 1069LEKLSSSVKRAINDWALPLACEKKFSELADPRLNGDYVEEELKRVILVALICAQNQPEKR 1248
Query: 235 PSMRDIVQVL 244
P+M ++V++L
Sbjct: 1249PTMVEVVELL 1278
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.317 0.134 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,417,003
Number of Sequences: 36976
Number of extensions: 110166
Number of successful extensions: 1763
Number of sequences better than 10.0: 655
Number of HSP's better than 10.0 without gapping: 1215
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1230
length of query: 308
length of database: 9,014,727
effective HSP length: 96
effective length of query: 212
effective length of database: 5,465,031
effective search space: 1158586572
effective search space used: 1158586572
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)
Medicago: description of AC147001.5