BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC147001.15 + phase: 0
(146 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC76926 GP|1435157|emb|CAA58445.1 histone H3 variant H3.3 {Lycop... 235 4e-63
TC85197 GP|1435157|emb|CAA58445.1 histone H3 variant H3.3 {Lycop... 235 4e-63
TC76927 GP|1435157|emb|CAA58445.1 histone H3 variant H3.3 {Lycop... 235 4e-63
TC85156 GP|1435157|emb|CAA58445.1 histone H3 variant H3.3 {Lycop... 235 4e-63
TC80359 GP|1435157|emb|CAA58445.1 histone H3 variant H3.3 {Lycop... 234 9e-63
TC86632 PIR|A26014|A26014 histone H3 - wheat, complete 231 1e-61
TC81197 PIR|A26014|A26014 histone H3 - wheat, complete 231 1e-61
TC77273 PIR|A26014|A26014 histone H3 - wheat, complete 231 1e-61
TC77274 similar to GP|22136956|gb|AAM91707.1 unknown protein {Ar... 231 1e-61
TC89120 PIR|A26014|A26014 histone H3 - wheat, complete 231 1e-61
TC78424 PIR|A26014|A26014 histone H3 - wheat, complete 231 1e-61
TC87557 PIR|A26014|A26014 histone H3 - wheat, complete 231 1e-61
TC81730 PIR|A26014|A26014 histone H3 - wheat, partial (94%) 217 1e-57
TC84535 homologue to GP|11121216|emb|CAC14792. histone H3 {Morti... 217 2e-57
TC88838 homologue to GP|11121216|emb|CAC14792. histone H3 {Morti... 215 4e-57
AJ501216 homologue to GP|1435157|emb histone H3 variant H3.3 {Ly... 210 1e-55
BI263077 GP|21702714|g histone H3 {Hypocrea jecorina}, complete 210 2e-55
TC92301 PIR|A26014|A26014 histone H3 - wheat, complete 129 3e-55
AW980465 PIR|A26014|A26 histone H3 - wheat, partial (98%) 199 4e-52
TC83567 homologue to GP|11121216|emb|CAC14792. histone H3 {Morti... 175 5e-45
>TC76926 GP|1435157|emb|CAA58445.1 histone H3 variant H3.3 {Lycopersicon
esculentum}, complete
Length = 695
Score = 235 bits (600), Expect = 4e-63
Identities = 126/146 (86%), Positives = 128/146 (87%)
Frame = +2
Query: 1 MARTKQTARKSTGGKAPRKELATKVARAPRAKGGGKSMRKMREGHVKKPHRFRCGTVALR 60
MARTKQTARKSTGGKAPRK+LATK AR GG VKKPHR+R GTVALR
Sbjct: 68 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGG----------VKKPHRYRPGTVALR 217
Query: 61 EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNL 120
EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNL
Sbjct: 218 EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNL 397
Query: 121 CAIHAKRVTIMPKDIQLARRIRGERA 146
CAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 398 CAIHAKRVTIMPKDIQLARRIRGERA 475
>TC85197 GP|1435157|emb|CAA58445.1 histone H3 variant H3.3 {Lycopersicon
esculentum}, complete
Length = 1332
Score = 235 bits (600), Expect = 4e-63
Identities = 126/146 (86%), Positives = 128/146 (87%)
Frame = +2
Query: 1 MARTKQTARKSTGGKAPRKELATKVARAPRAKGGGKSMRKMREGHVKKPHRFRCGTVALR 60
MARTKQTARKSTGGKAPRK+LATK AR GG VKKPHR+R GTVALR
Sbjct: 566 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGG----------VKKPHRYRPGTVALR 715
Query: 61 EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNL 120
EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNL
Sbjct: 716 EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNL 895
Query: 121 CAIHAKRVTIMPKDIQLARRIRGERA 146
CAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 896 CAIHAKRVTIMPKDIQLARRIRGERA 973
>TC76927 GP|1435157|emb|CAA58445.1 histone H3 variant H3.3 {Lycopersicon
esculentum}, complete
Length = 741
Score = 235 bits (600), Expect = 4e-63
Identities = 126/146 (86%), Positives = 128/146 (87%)
Frame = +2
Query: 1 MARTKQTARKSTGGKAPRKELATKVARAPRAKGGGKSMRKMREGHVKKPHRFRCGTVALR 60
MARTKQTARKSTGGKAPRK+LATK AR GG VKKPHR+R GTVALR
Sbjct: 104 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGG----------VKKPHRYRPGTVALR 253
Query: 61 EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNL 120
EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNL
Sbjct: 254 EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNL 433
Query: 121 CAIHAKRVTIMPKDIQLARRIRGERA 146
CAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 434 CAIHAKRVTIMPKDIQLARRIRGERA 511
>TC85156 GP|1435157|emb|CAA58445.1 histone H3 variant H3.3 {Lycopersicon
esculentum}, complete
Length = 754
Score = 235 bits (600), Expect = 4e-63
Identities = 126/146 (86%), Positives = 128/146 (87%)
Frame = +1
Query: 1 MARTKQTARKSTGGKAPRKELATKVARAPRAKGGGKSMRKMREGHVKKPHRFRCGTVALR 60
MARTKQTARKSTGGKAPRK+LATK AR GG VKKPHR+R GTVALR
Sbjct: 61 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGG----------VKKPHRYRPGTVALR 210
Query: 61 EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNL 120
EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNL
Sbjct: 211 EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNL 390
Query: 121 CAIHAKRVTIMPKDIQLARRIRGERA 146
CAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 391 CAIHAKRVTIMPKDIQLARRIRGERA 468
>TC80359 GP|1435157|emb|CAA58445.1 histone H3 variant H3.3 {Lycopersicon
esculentum}, complete
Length = 1440
Score = 234 bits (597), Expect = 9e-63
Identities = 125/146 (85%), Positives = 128/146 (87%)
Frame = +2
Query: 1 MARTKQTARKSTGGKAPRKELATKVARAPRAKGGGKSMRKMREGHVKKPHRFRCGTVALR 60
MARTKQTARKSTGGKAPRK+LATK AR GG VKKPHR+R GTVALR
Sbjct: 53 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGG----------VKKPHRYRPGTVALR 202
Query: 61 EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNL 120
EIRKYQKST+LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNL
Sbjct: 203 EIRKYQKSTDLLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNL 382
Query: 121 CAIHAKRVTIMPKDIQLARRIRGERA 146
CAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 383 CAIHAKRVTIMPKDIQLARRIRGERA 460
>TC86632 PIR|A26014|A26014 histone H3 - wheat, complete
Length = 640
Score = 231 bits (588), Expect = 1e-61
Identities = 125/146 (85%), Positives = 126/146 (85%)
Frame = +3
Query: 1 MARTKQTARKSTGGKAPRKELATKVARAPRAKGGGKSMRKMREGHVKKPHRFRCGTVALR 60
MARTKQTARKSTGGKAPRK+LATK AR GG VKKPHRFR GTVALR
Sbjct: 84 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGG----------VKKPHRFRPGTVALR 233
Query: 61 EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNL 120
EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS AV ALQEAAEAYLVGLFEDTNL
Sbjct: 234 EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNL 413
Query: 121 CAIHAKRVTIMPKDIQLARRIRGERA 146
CAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 414 CAIHAKRVTIMPKDIQLARRIRGERA 491
>TC81197 PIR|A26014|A26014 histone H3 - wheat, complete
Length = 646
Score = 231 bits (588), Expect = 1e-61
Identities = 125/146 (85%), Positives = 126/146 (85%)
Frame = +1
Query: 1 MARTKQTARKSTGGKAPRKELATKVARAPRAKGGGKSMRKMREGHVKKPHRFRCGTVALR 60
MARTKQTARKSTGGKAPRK+LATK AR GG VKKPHRFR GTVALR
Sbjct: 67 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGG----------VKKPHRFRPGTVALR 216
Query: 61 EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNL 120
EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS AV ALQEAAEAYLVGLFEDTNL
Sbjct: 217 EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNL 396
Query: 121 CAIHAKRVTIMPKDIQLARRIRGERA 146
CAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 397 CAIHAKRVTIMPKDIQLARRIRGERA 474
>TC77273 PIR|A26014|A26014 histone H3 - wheat, complete
Length = 697
Score = 231 bits (588), Expect = 1e-61
Identities = 125/146 (85%), Positives = 126/146 (85%)
Frame = +2
Query: 1 MARTKQTARKSTGGKAPRKELATKVARAPRAKGGGKSMRKMREGHVKKPHRFRCGTVALR 60
MARTKQTARKSTGGKAPRK+LATK AR GG VKKPHRFR GTVALR
Sbjct: 71 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGG----------VKKPHRFRPGTVALR 220
Query: 61 EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNL 120
EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS AV ALQEAAEAYLVGLFEDTNL
Sbjct: 221 EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNL 400
Query: 121 CAIHAKRVTIMPKDIQLARRIRGERA 146
CAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 401 CAIHAKRVTIMPKDIQLARRIRGERA 478
>TC77274 similar to GP|22136956|gb|AAM91707.1 unknown protein {Arabidopsis
thaliana}, partial (80%)
Length = 2013
Score = 231 bits (588), Expect = 1e-61
Identities = 125/146 (85%), Positives = 126/146 (85%)
Frame = +3
Query: 1 MARTKQTARKSTGGKAPRKELATKVARAPRAKGGGKSMRKMREGHVKKPHRFRCGTVALR 60
MARTKQTARKSTGGKAPRK+LATK AR GG VKKPHRFR GTVALR
Sbjct: 75 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGG----------VKKPHRFRPGTVALR 224
Query: 61 EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNL 120
EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS AV ALQEAAEAYLVGLFEDTNL
Sbjct: 225 EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNL 404
Query: 121 CAIHAKRVTIMPKDIQLARRIRGERA 146
CAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 405 CAIHAKRVTIMPKDIQLARRIRGERA 482
>TC89120 PIR|A26014|A26014 histone H3 - wheat, complete
Length = 652
Score = 231 bits (588), Expect = 1e-61
Identities = 125/146 (85%), Positives = 126/146 (85%)
Frame = +2
Query: 1 MARTKQTARKSTGGKAPRKELATKVARAPRAKGGGKSMRKMREGHVKKPHRFRCGTVALR 60
MARTKQTARKSTGGKAPRK+LATK AR GG VKKPHRFR GTVALR
Sbjct: 50 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGG----------VKKPHRFRPGTVALR 199
Query: 61 EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNL 120
EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS AV ALQEAAEAYLVGLFEDTNL
Sbjct: 200 EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNL 379
Query: 121 CAIHAKRVTIMPKDIQLARRIRGERA 146
CAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 380 CAIHAKRVTIMPKDIQLARRIRGERA 457
>TC78424 PIR|A26014|A26014 histone H3 - wheat, complete
Length = 652
Score = 231 bits (588), Expect = 1e-61
Identities = 125/146 (85%), Positives = 126/146 (85%)
Frame = +1
Query: 1 MARTKQTARKSTGGKAPRKELATKVARAPRAKGGGKSMRKMREGHVKKPHRFRCGTVALR 60
MARTKQTARKSTGGKAPRK+LATK AR GG VKKPHRFR GTVALR
Sbjct: 61 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGG----------VKKPHRFRPGTVALR 210
Query: 61 EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNL 120
EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS AV ALQEAAEAYLVGLFEDTNL
Sbjct: 211 EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNL 390
Query: 121 CAIHAKRVTIMPKDIQLARRIRGERA 146
CAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 391 CAIHAKRVTIMPKDIQLARRIRGERA 468
>TC87557 PIR|A26014|A26014 histone H3 - wheat, complete
Length = 621
Score = 231 bits (588), Expect = 1e-61
Identities = 125/146 (85%), Positives = 126/146 (85%)
Frame = +2
Query: 1 MARTKQTARKSTGGKAPRKELATKVARAPRAKGGGKSMRKMREGHVKKPHRFRCGTVALR 60
MARTKQTARKSTGGKAPRK+LATK AR GG VKKPHRFR GTVALR
Sbjct: 71 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGG----------VKKPHRFRPGTVALR 220
Query: 61 EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNL 120
EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS AV ALQEAAEAYLVGLFEDTNL
Sbjct: 221 EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNL 400
Query: 121 CAIHAKRVTIMPKDIQLARRIRGERA 146
CAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 401 CAIHAKRVTIMPKDIQLARRIRGERA 478
>TC81730 PIR|A26014|A26014 histone H3 - wheat, partial (94%)
Length = 571
Score = 217 bits (553), Expect = 1e-57
Identities = 119/146 (81%), Positives = 124/146 (84%)
Frame = +2
Query: 1 MARTKQTARKSTGGKAPRKELATKVARAPRAKGGGKSMRKMREGHVKKPHRFRCGTVALR 60
+ ++KQ+ RKSTGGKAPRK+LATK AR GG VKKPHRFR GTVALR
Sbjct: 38 LVQSKQS-RKSTGGKAPRKQLATKAARKSAPATGG----------VKKPHRFRPGTVALR 184
Query: 61 EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNL 120
EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS AV ALQEAAEAYLVGLFEDTNL
Sbjct: 185 EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNL 364
Query: 121 CAIHAKRVTIMPKDIQLARRIRGERA 146
CAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 365 CAIHAKRVTIMPKDIQLARRIRGERA 442
>TC84535 homologue to GP|11121216|emb|CAC14792. histone H3 {Mortierella
alpina}, partial (98%)
Length = 654
Score = 217 bits (552), Expect = 2e-57
Identities = 116/146 (79%), Positives = 123/146 (83%)
Frame = +2
Query: 1 MARTKQTARKSTGGKAPRKELATKVARAPRAKGGGKSMRKMREGHVKKPHRFRCGTVALR 60
+ARTKQTARKSTGGKAPRK+LATK AR GG VKKPHR+R GTVALR
Sbjct: 38 VARTKQTARKSTGGKAPRKQLATKAARKSAPAAGG----------VKKPHRYRPGTVALR 187
Query: 61 EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNL 120
EIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS A+ ALQEAAEAYLV LFEDTNL
Sbjct: 188 EIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAIGALQEAAEAYLVALFEDTNL 367
Query: 121 CAIHAKRVTIMPKDIQLARRIRGERA 146
AIHAKRVTI PKDIQLARR+RGER+
Sbjct: 368 AAIHAKRVTIQPKDIQLARRLRGERS 445
>TC88838 homologue to GP|11121216|emb|CAC14792. histone H3 {Mortierella
alpina}, complete
Length = 730
Score = 215 bits (548), Expect = 4e-57
Identities = 115/146 (78%), Positives = 123/146 (83%)
Frame = +3
Query: 1 MARTKQTARKSTGGKAPRKELATKVARAPRAKGGGKSMRKMREGHVKKPHRFRCGTVALR 60
MARTKQTARKSTGGKAPRK+LATK AR GG VKKPHR+R GTVALR
Sbjct: 108 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGG----------VKKPHRYRPGTVALR 257
Query: 61 EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNL 120
EIR+YQK+T+LLIRKLPFQRLVREIAQDFKTDLRFQS A+ ALQEAAEAYLV LFEDTNL
Sbjct: 258 EIRRYQKTTDLLIRKLPFQRLVREIAQDFKTDLRFQSSAIGALQEAAEAYLVALFEDTNL 437
Query: 121 CAIHAKRVTIMPKDIQLARRIRGERA 146
AIHAKRVTI PKDIQLARR+RGER+
Sbjct: 438 AAIHAKRVTIQPKDIQLARRLRGERS 515
>AJ501216 homologue to GP|1435157|emb histone H3 variant H3.3 {Lycopersicon
esculentum}, partial (96%)
Length = 450
Score = 210 bits (535), Expect = 1e-55
Identities = 112/141 (79%), Positives = 119/141 (83%)
Frame = +1
Query: 1 MARTKQTARKSTGGKAPRKELATKVARAPRAKGGGKSMRKMREGHVKKPHRFRCGTVALR 60
MARTKQTAR+ST GKAPRK+LATK AR GG +KKPHR+R GTVALR
Sbjct: 58 MARTKQTARRSTLGKAPRKQLATKAARKSVPTTGG----------IKKPHRYRPGTVALR 207
Query: 61 EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNL 120
EIRKYQK TELLIRKLPFQRLVREIAQ+FKTDLRFQSHAVLALQEA EAYLVGLFEDTNL
Sbjct: 208 EIRKYQKGTELLIRKLPFQRLVREIAQNFKTDLRFQSHAVLALQEAVEAYLVGLFEDTNL 387
Query: 121 CAIHAKRVTIMPKDIQLARRI 141
CAIHAKR+T+M KDIQLARRI
Sbjct: 388 CAIHAKRITVMVKDIQLARRI 450
>BI263077 GP|21702714|g histone H3 {Hypocrea jecorina}, complete
Length = 682
Score = 210 bits (534), Expect = 2e-55
Identities = 111/145 (76%), Positives = 121/145 (82%)
Frame = +2
Query: 1 MARTKQTARKSTGGKAPRKELATKVARAPRAKGGGKSMRKMREGHVKKPHRFRCGTVALR 60
MARTKQTARKSTGGKAPRK+LA+K AR GG VKKPHR++ GTVALR
Sbjct: 92 MARTKQTARKSTGGKAPRKQLASKAARKSAPSTGG----------VKKPHRYKPGTVALR 241
Query: 61 EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNL 120
EIR+YQKSTELLIRKLPFQRLVREIAQDFK+DLRFQS A+ ALQE+ E+YLV LFEDTNL
Sbjct: 242 EIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQESVESYLVSLFEDTNL 421
Query: 121 CAIHAKRVTIMPKDIQLARRIRGER 145
CAIHAKRVTI KDIQLARR+RGER
Sbjct: 422 CAIHAKRVTIQSKDIQLARRLRGER 496
>TC92301 PIR|A26014|A26014 histone H3 - wheat, complete
Length = 557
Score = 129 bits (323), Expect(2) = 3e-55
Identities = 67/73 (91%), Positives = 68/73 (92%)
Frame = +3
Query: 74 RKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPK 133
+K FQRLVREIAQDFKT LRFQS AV ALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPK
Sbjct: 201 KKTSFQRLVREIAQDFKTYLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPK 380
Query: 134 DIQLARRIRGERA 146
DIQLARRIRGERA
Sbjct: 381 DIQLARRIRGERA 419
Score = 102 bits (254), Expect(2) = 3e-55
Identities = 57/76 (75%), Positives = 58/76 (76%)
Frame = +1
Query: 1 MARTKQTARKSTGGKAPRKELATKVARAPRAKGGGKSMRKMREGHVKKPHRFRCGTVALR 60
MARTKQTARKSTGGKAPRK+LATK AR GG VKKPHRFR GTVALR
Sbjct: 13 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGG----------VKKPHRFRPGTVALR 162
Query: 61 EIRKYQKSTELLIRKL 76
EIRKYQKSTELLIRKL
Sbjct: 163EIRKYQKSTELLIRKL 210
>AW980465 PIR|A26014|A26 histone H3 - wheat, partial (98%)
Length = 607
Score = 199 bits (505), Expect = 4e-52
Identities = 113/143 (79%), Positives = 114/143 (79%)
Frame = +2
Query: 4 TKQTARKSTGGKAPRKELATKVARAPRAKGGGKSMRKMREGHVKKPHRFRCGTVALREIR 63
TK RKS G K+LATK AR GG VKKPHRFR GTVALREIR
Sbjct: 53 TKIHRRKSRG-----KQLATKAARKSAPATGG----------VKKPHRFRPGTVALREIR 187
Query: 64 KYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAI 123
KYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS AV ALQEAAEAYLVGLFEDTNLCAI
Sbjct: 188 KYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAI 367
Query: 124 HAKRVTIMPKDIQLARRIRGERA 146
HAKRVTIMPKDIQLARRIRGERA
Sbjct: 368 HAKRVTIMPKDIQLARRIRGERA 436
Score = 32.7 bits (73), Expect = 0.053
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +3
Query: 1 MARTKQTARKSTGGKA 16
MARTK TARKSTGGKA
Sbjct: 30 MARTKHTARKSTGGKA 77
>TC83567 homologue to GP|11121216|emb|CAC14792. histone H3 {Mortierella
alpina}, partial (81%)
Length = 454
Score = 175 bits (444), Expect = 5e-45
Identities = 95/120 (79%), Positives = 99/120 (82%)
Frame = +3
Query: 1 MARTKQTARKSTGGKAPRKELATKVARAPRAKGGGKSMRKMREGHVKKPHRFRCGTVALR 60
MARTKQTARKSTGGKAPRK+LATK AR GG VKKPHR+R GTVALR
Sbjct: 120 MARTKQTARKSTGGKAPRKQLATKAARKSAPAAGG----------VKKPHRYRPGTVALR 269
Query: 61 EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNL 120
EIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS A+ ALQEAAEAYLV LFEDTNL
Sbjct: 270 EIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAIGALQEAAEAYLVALFEDTNL 449
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.323 0.135 0.376
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,056,673
Number of Sequences: 36976
Number of extensions: 29617
Number of successful extensions: 227
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 205
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 208
length of query: 146
length of database: 9,014,727
effective HSP length: 87
effective length of query: 59
effective length of database: 5,797,815
effective search space: 342071085
effective search space used: 342071085
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 54 (25.4 bits)
Medicago: description of AC147001.15