
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC147000.5 - phase: 0
(221 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC81684 weakly similar to GP|21593080|gb|AAM65029.1 unknown {Ara... 445 e-126
TC78205 homologue to PIR|T47559|T47559 60S ribosomal protein-lik... 31 0.33
TC90881 weakly similar to GP|21327989|dbj|BAC00578. contains EST... 30 0.73
TC85972 homologue to SP|O65743|RL24_CICAR 60S ribosomal protein ... 30 0.96
TC85973 homologue to SP|O65743|RL24_CICAR 60S ribosomal protein ... 30 0.96
TC91964 similar to GP|23496165|gb|AAN35825.1 hypothetical protei... 29 1.6
TC86770 similar to GP|13872875|dbj|BAB43982. contains EST AU0965... 29 1.6
TC85980 similar to GP|15294146|gb|AAK95250.1 AT4g18030/T6K21_210... 28 2.1
TC86716 similar to PIR|T14279|T14279 myosin-like protein my5 - c... 28 2.1
TC76681 homologue to SP|O22585|AMYB_MEDSA Beta-amylase (EC 3.2.1... 28 2.1
TC90656 similar to PIR|G96810|G96810 unknown protein T11I11.9 [i... 28 2.1
TC81709 similar to PIR|T05867|T05867 hypothetical protein T29A15... 28 2.8
TC81530 similar to GP|10177440|dbj|BAB10736. gb|AAC55944.1~gene_... 28 2.8
BG587062 similar to GP|19881001|gb chemiosmotic efflux system B ... 28 2.8
TC88759 similar to GP|16588826|gb|AAL26909.1 dehydration-respons... 27 6.2
TC76342 similar to PIR|A86444|A86444 probable RNA helicase [impo... 27 6.2
BQ138404 weakly similar to PIR|T14601|T146 plasma membrane major... 27 6.2
BQ144999 homologue to GP|14318171|gb| fructose-1 6-bisphosphatas... 27 8.1
TC79012 similar to GP|13877821|gb|AAK43988.1 unknown protein {Ar... 27 8.1
TC86126 homologue to GP|14318171|gb|AAK59929.1 fructose-1 6-bisp... 27 8.1
>TC81684 weakly similar to GP|21593080|gb|AAM65029.1 unknown {Arabidopsis
thaliana}, partial (29%)
Length = 732
Score = 445 bits (1145), Expect = e-126
Identities = 221/221 (100%), Positives = 221/221 (100%)
Frame = +3
Query: 1 MAEEELNNGYCSSSGDEDGDAAWKAAIDSVAGTSSYVTSFMNGFSATNNNDTKKKHNDNQ 60
MAEEELNNGYCSSSGDEDGDAAWKAAIDSVAGTSSYVTSFMNGFSATNNNDTKKKHNDNQ
Sbjct: 6 MAEEELNNGYCSSSGDEDGDAAWKAAIDSVAGTSSYVTSFMNGFSATNNNDTKKKHNDNQ 185
Query: 61 NPKSPKIKHYQLKALKLLDDILENTIEIVKEPIPVLDEDPNVDDCGIRLFRHSKPGIVFD 120
NPKSPKIKHYQLKALKLLDDILENTIEIVKEPIPVLDEDPNVDDCGIRLFRHSKPGIVFD
Sbjct: 186 NPKSPKIKHYQLKALKLLDDILENTIEIVKEPIPVLDEDPNVDDCGIRLFRHSKPGIVFD 365
Query: 121 HADEPQPPMKRPKLVPGEDIDEKSKKFRRRIRSIAVDGNDLIAAANDAYKKSLARLEAKD 180
HADEPQPPMKRPKLVPGEDIDEKSKKFRRRIRSIAVDGNDLIAAANDAYKKSLARLEAKD
Sbjct: 366 HADEPQPPMKRPKLVPGEDIDEKSKKFRRRIRSIAVDGNDLIAAANDAYKKSLARLEAKD 545
Query: 181 AAAKAKAKREEERIEKLKKIRGERWLPSMAKEMQAKIKIKH 221
AAAKAKAKREEERIEKLKKIRGERWLPSMAKEMQAKIKIKH
Sbjct: 546 AAAKAKAKREEERIEKLKKIRGERWLPSMAKEMQAKIKIKH 668
>TC78205 homologue to PIR|T47559|T47559 60S ribosomal protein-like -
Arabidopsis thaliana, partial (93%)
Length = 858
Score = 31.2 bits (69), Expect = 0.33
Identities = 21/78 (26%), Positives = 38/78 (47%)
Frame = +1
Query: 138 EDIDEKSKKFRRRIRSIAVDGNDLIAAANDAYKKSLARLEAKDAAAKAKAKREEERIEKL 197
+DI +++ K RRR + + A KK + E +DAA +A + +ER++K
Sbjct: 241 KDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALREIKERVKKT 420
Query: 198 KKIRGERWLPSMAKEMQA 215
K + + S AK ++
Sbjct: 421 KDEKKAKKAESQAKAQKS 474
>TC90881 weakly similar to GP|21327989|dbj|BAC00578. contains ESTs
AU093876(E1018) AU093877(E1018)~unknown protein, partial
(10%)
Length = 655
Score = 30.0 bits (66), Expect = 0.73
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = +2
Query: 12 SSSGDEDGDAAWKAAIDSVAGTSSYVTSFMNGFSATNNNDTKKKHNDN 59
S EDG + WK D+V G S NG + N N + KK N
Sbjct: 218 SRDSGEDGSSDWKKGSDNVEGWKS-----NNGSGSWNQNSSDKKDGGN 346
>TC85972 homologue to SP|O65743|RL24_CICAR 60S ribosomal protein L24.
[Chickpea Garbanzo] {Cicer arietinum}, partial (98%)
Length = 764
Score = 29.6 bits (65), Expect = 0.96
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = +1
Query: 138 EDIDEKSKKFRRRIRSIAVDGNDLIAAANDAYKKSLARLEAKDAAAKAKAKREEERIEKL 197
+DI +++ K RRR + + A KK + E +DAA +A + +ERI+K
Sbjct: 259 KDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALREIKERIKKT 438
Query: 198 K 198
K
Sbjct: 439 K 441
>TC85973 homologue to SP|O65743|RL24_CICAR 60S ribosomal protein L24.
[Chickpea Garbanzo] {Cicer arietinum}, partial (98%)
Length = 725
Score = 29.6 bits (65), Expect = 0.96
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = +2
Query: 138 EDIDEKSKKFRRRIRSIAVDGNDLIAAANDAYKKSLARLEAKDAAAKAKAKREEERIEKL 197
+DI +++ K RRR + + A KK + E +DAA +A + +ERI+K
Sbjct: 245 KDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALREIKERIKKT 424
Query: 198 K 198
K
Sbjct: 425 K 427
>TC91964 similar to GP|23496165|gb|AAN35825.1 hypothetical protein
{Plasmodium falciparum 3D7}, partial (1%)
Length = 827
Score = 28.9 bits (63), Expect = 1.6
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = +1
Query: 28 DSVAGTSSYV--TSFMNGFSATNNNDTKKKHNDNQN 61
D+V GT V T F + NNN+ K NDN+N
Sbjct: 367 DNVIGTVDIVSTTDFSENNNDNNNNNDKNNDNDNEN 474
>TC86770 similar to GP|13872875|dbj|BAB43982. contains EST
AU096506(S14064)~unknown protein {Oryza sativa (japonica
cultivar-group)}, partial (73%)
Length = 2061
Score = 28.9 bits (63), Expect = 1.6
Identities = 35/129 (27%), Positives = 52/129 (40%), Gaps = 9/129 (6%)
Frame = +2
Query: 80 DILENTIEIVKEPIPVLDEDPNVDDCGIRLFRHSKPGIVFDHADEPQPPMKRPKLVPGED 139
D L E E +D+D +DD G+ +P + DEP+ P P+ GE+
Sbjct: 566 DALAGNSEDDNEGARNMDDDNFIDDTGV------EPALY--GYDEPRSPGDAPQAEEGEE 721
Query: 140 IDE---------KSKKFRRRIRSIAVDGNDLIAAANDAYKKSLARLEAKDAAAKAKAKRE 190
DE K KK R IA+ +++A ++ A L + A K K+
Sbjct: 722 DDEIKDLFKMGKKKKKNERSPAEIALLVENVMAELEVTAEED-AELNRQHKPAVNKLKKL 898
Query: 191 EERIEKLKK 199
IE L K
Sbjct: 899 PLLIEVLSK 925
>TC85980 similar to GP|15294146|gb|AAK95250.1 AT4g18030/T6K21_210 {Arabidopsis
thaliana}, partial (82%)
Length = 2287
Score = 28.5 bits (62), Expect = 2.1
Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 3/96 (3%)
Frame = +3
Query: 61 NPKSPKIKHYQLKALKLLDDILENTIEIVKEPIPVLDEDPNVDDCGIRLFRHSKPGIVFD 120
N KS + K L L DD+ +E+ K PIP + V ++ F P +F
Sbjct: 1401 NAKSCQRKSLNLCDLDNADDVWYKKMEVCKTPIPEVTSQSEVAGGELKKF----PARLF- 1565
Query: 121 HADEPQPPMKRPKLVPG---EDIDEKSKKFRRRIRS 153
PP +PG E E +K +++R+ +
Sbjct: 1566 ----AVPPRIAKDAIPGVTVESYQEDNKLWKKRVNN 1661
>TC86716 similar to PIR|T14279|T14279 myosin-like protein my5 - common
sunflower, partial (38%)
Length = 2675
Score = 28.5 bits (62), Expect = 2.1
Identities = 17/62 (27%), Positives = 29/62 (46%)
Frame = +2
Query: 159 NDLIAAANDAYKKSLARLEAKDAAAKAKAKREEERIEKLKKIRGERWLPSMAKEMQAKIK 218
N L+A N + L EAK+ A +A+A+ E E KK+ +E+ +++
Sbjct: 251 NSLLAEVNCLKESLLLEREAKEEAKRAQAETEARSKELFKKVEDSDRKADQLQELVQRLE 430
Query: 219 IK 220
K
Sbjct: 431 EK 436
>TC76681 homologue to SP|O22585|AMYB_MEDSA Beta-amylase (EC 3.2.1.2) (1
4-alpha-D-glucan maltohydrolase). [Alfalfa] {Medicago
sativa}, complete
Length = 1816
Score = 28.5 bits (62), Expect = 2.1
Identities = 21/74 (28%), Positives = 38/74 (50%), Gaps = 10/74 (13%)
Frame = +1
Query: 65 PKIKHYQLKALKLLDDIL-ENTIEIVKEPIPVLD------EDPNVDDCGIRLFRHSKPGI 117
PK++ Y + L+L DD++ ++ +I K+ + + DP + GI + S+P I
Sbjct: 1234 PKLRMYGVTYLRLSDDLMQQSNFDIFKKFVVKMHADQDYCSDPEKYNHGIPPLKRSEPKI 1413
Query: 118 ---VFDHADEPQPP 128
V + A +P PP
Sbjct: 1414 PVDVLNEATKPIPP 1455
>TC90656 similar to PIR|G96810|G96810 unknown protein T11I11.9 [imported] -
Arabidopsis thaliana, partial (24%)
Length = 1314
Score = 28.5 bits (62), Expect = 2.1
Identities = 27/121 (22%), Positives = 52/121 (42%), Gaps = 21/121 (17%)
Frame = +1
Query: 106 GIRLFRHSKPGIV---FDHADE---PQPPMKRPKLVPGEDID--------EKSKKFRRRI 151
GIR+++ + GI F++ +E P+ P P+ ++ SKK
Sbjct: 394 GIRVYQQAMNGISQISFNNGEEIISPKKPTSLPEAAKQRELGGTLQNEPGTNSKKLMSSS 573
Query: 152 RSIAVDGNDLIAAANDAYKKSLARLEAKD------AAAKAKAKREEERIEKL-KKIRGER 204
++ + GND+ + +SLA + D A ++K EE +K +KI ++
Sbjct: 574 KTKEIGGNDIFGIPPEIVPRSLAAVHTPDSKVYKAAGVRSKVVSGEESAQKTSRKIHDQK 753
Query: 205 W 205
+
Sbjct: 754 F 756
>TC81709 similar to PIR|T05867|T05867 hypothetical protein T29A15.110 -
Arabidopsis thaliana, partial (72%)
Length = 1383
Score = 28.1 bits (61), Expect = 2.8
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 8/43 (18%)
Frame = +3
Query: 186 KAKREEERIEKLKK--------IRGERWLPSMAKEMQAKIKIK 220
K K EEERIE LK+ I G+ +L KE ++++ +K
Sbjct: 1056 KTKDEEERIEMLKRQVGELKEAIEGKEYLLQSYKEQKSELSLK 1184
>TC81530 similar to GP|10177440|dbj|BAB10736.
gb|AAC55944.1~gene_id:K9H21.2~similar to unknown protein
{Arabidopsis thaliana}, partial (24%)
Length = 1135
Score = 28.1 bits (61), Expect = 2.8
Identities = 23/71 (32%), Positives = 39/71 (54%)
Frame = +1
Query: 123 DEPQPPMKRPKLVPGEDIDEKSKKFRRRIRSIAVDGNDLIAAANDAYKKSLARLEAKDAA 182
DE + P K + E+++ + K+ + R+++ A AA +A +K+ A +AA
Sbjct: 412 DEKRDPEKLR--IEREELERRQKEEKARLQAEA-------KAAEEARRKAEA-----EAA 549
Query: 183 AKAKAKREEER 193
A+AK KRE ER
Sbjct: 550 AEAKRKRELER 582
>BG587062 similar to GP|19881001|gb chemiosmotic efflux system B protein A
{Legionella pneumophila}, partial (1%)
Length = 780
Score = 28.1 bits (61), Expect = 2.8
Identities = 41/169 (24%), Positives = 63/169 (37%), Gaps = 11/169 (6%)
Frame = +3
Query: 47 TNNNDTKKKHNDNQNPKSPKIKHYQLKALKLLDDILENTIEIVKEPIPVLDEDPNVDDCG 106
+NN TKKK N+N K+ + K ++ +N +EP P L+ N
Sbjct: 264 SNNIATKKKRKKNRN-KNKNKSMINAEEPKPALELGKN-----EEPKPALELGKN----- 410
Query: 107 IRLFRHSKPGIVFDHADEPQPPMKRPKLVPGEDIDEKSKKFRRRIRSIAVDGNDL----I 162
KP + + +EP+P ++ K E I R+R R +G + I
Sbjct: 411 ----EEPKPVLELEKNEEPKPALELEKNKEVESIAVAKTMTRKRKRKSVQNGAESNEHNI 578
Query: 163 AAANDAYKKSLARLEAKDAAAKAKAKRE-------EERIEKLKKIRGER 204
A A + S+ E + EER + KK R ER
Sbjct: 579 EQAETAVQMSILDTEVPPIDKAIAVNNQHVSLDELEERYFERKKTRKER 725
>TC88759 similar to GP|16588826|gb|AAL26909.1 dehydration-responsive protein
RD22 {Prunus persica}, partial (14%)
Length = 1111
Score = 26.9 bits (58), Expect = 6.2
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +2
Query: 30 VAGTSSYVTSFMNGFSATNNNDTKKKHN-DNQNPKSPKIK-HYQLKALKL 77
+AGT S + +ATN + T+ KH+ N N P + + LK LK+
Sbjct: 83 LAGTESKLLDIAVNKTATNEHQTEHKHHAHNHNHMDPSVMVFFTLKDLKV 232
>TC76342 similar to PIR|A86444|A86444 probable RNA helicase [imported] -
Arabidopsis thaliana, partial (80%)
Length = 1651
Score = 26.9 bits (58), Expect = 6.2
Identities = 39/146 (26%), Positives = 60/146 (40%), Gaps = 17/146 (11%)
Frame = +3
Query: 46 ATNNN----DTKKKHNDNQNPKS-PKIKHYQLKALKLLDDILENTIEIVKEPIPVLDE-- 98
A NNN +KKK N++ ++ PK KH + L+N E K+
Sbjct: 105 ALNNNTELKSSKKKTKKNKHEETTPKRKHQD-------ETNLQNDTESEKKSKKKKKHNK 263
Query: 99 -DPNVDDCGIRLFRHSKPGIVF--DHADEPQPPMKR--PKLVPGEDID-----EKSKKFR 148
+ N D G+ + +P +V + DE P+KR +P ++ EK +
Sbjct: 264 SEENNDAGGVSVSASDEPIVVTGKNAGDEKYTPVKRFEDSGLPENVLECCKGFEKPSPIQ 443
Query: 149 RRIRSIAVDGNDLIAAANDAYKKSLA 174
R +DG DLI A K+LA
Sbjct: 444 SRAWPFLLDGRDLIGIAATGSGKTLA 521
>BQ138404 weakly similar to PIR|T14601|T146 plasma membrane major intrinsic
protein 3 - beet, partial (12%)
Length = 661
Score = 26.9 bits (58), Expect = 6.2
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -1
Query: 3 EEELNNGYCSSSGDEDGDAAWKAAIDSVAG 32
E+ L NGY S G D AW+ D+ G
Sbjct: 649 EKTLCNGYARSEGSRDVQIAWEHGRDNSGG 560
>BQ144999 homologue to GP|14318171|gb| fructose-1 6-bisphosphatase {Pisum
sativum}, partial (22%)
Length = 625
Score = 26.6 bits (57), Expect = 8.1
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +2
Query: 60 QNPKSPKIKHYQLKALKLLDDILENTIEIVKEP 92
Q PKS KI + KL DD L+ I+ +KEP
Sbjct: 506 QIPKSGKIYSFNEGNYKLWDDNLKKYIDDLKEP 604
>TC79012 similar to GP|13877821|gb|AAK43988.1 unknown protein {Arabidopsis
thaliana}, partial (89%)
Length = 1493
Score = 26.6 bits (57), Expect = 8.1
Identities = 20/75 (26%), Positives = 39/75 (51%), Gaps = 4/75 (5%)
Frame = +3
Query: 23 WKAAIDS---VAGTSSYVTSFMNGFSATNNNDTKKKHNDNQNPKSPKIKHYQLKA-LKLL 78
WK ++S + GT Y++ + +++ KH+D+++ +H + K L+
Sbjct: 474 WKLRLNSYGQIIGTE-YISDLVEKGHEHDHDHGTHKHDDSKDHH----EHSEQKVHLQTF 638
Query: 79 DDILENTIEIVKEPI 93
D+ ENTI+ VKE +
Sbjct: 639 DEATENTIKKVKEAL 683
>TC86126 homologue to GP|14318171|gb|AAK59929.1 fructose-1 6-bisphosphatase
{Pisum sativum}, partial (88%)
Length = 1205
Score = 26.6 bits (57), Expect = 8.1
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +1
Query: 60 QNPKSPKIKHYQLKALKLLDDILENTIEIVKEP 92
Q PKS KI + KL DD L+ I+ +KEP
Sbjct: 952 QIPKSGKIYSFNEGNYKLWDDNLKKYIDDLKEP 1050
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.311 0.131 0.368
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,055,815
Number of Sequences: 36976
Number of extensions: 75649
Number of successful extensions: 445
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 436
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 444
length of query: 221
length of database: 9,014,727
effective HSP length: 92
effective length of query: 129
effective length of database: 5,612,935
effective search space: 724068615
effective search space used: 724068615
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 56 (26.2 bits)
Medicago: description of AC147000.5