BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC147000.1 - phase: 0
(504 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BG587215 similar to GP|8453100|gb| short-root protein {Arabidops... 293 8e-80
AW685610 similar to GP|18491223|gb| putative SHORT-ROOT (SHR) pr... 206 1e-53
BE326037 similar to GP|18491223|gb putative SHORT-ROOT (SHR) pro... 188 2e-52
TC77707 weakly similar to GP|8777405|dbj|BAA96995.1 SCARECROW ge... 197 1e-50
TC77716 similar to GP|20465587|gb|AAM20276.1 unknown protein {Ar... 194 7e-50
TC79190 similar to PIR|E96542|E96542 scarecrow-like protein [imp... 186 1e-47
TC86258 similar to GP|16930433|gb|AAL31902.1 AT4g17230/dl4650c {... 175 4e-44
TC77063 similar to GP|20334379|gb|AAM19210.1 GAI-like protein 1 ... 164 1e-40
TC76809 similar to GP|20334379|gb|AAM19210.1 GAI-like protein 1 ... 152 3e-37
TC78035 similar to GP|8778540|gb|AAF79548.1| F22G5.9 {Arabidopsi... 148 4e-36
TC90677 similar to GP|8453100|gb|AAF75234.1| short-root protein ... 119 3e-32
BG586348 similar to GP|20465587|gb unknown protein {Arabidopsis ... 121 5e-28
TC89212 weakly similar to PIR|T02531|T02531 probable SCARECROW g... 116 2e-26
TC79937 similar to GP|14517552|gb|AAK62666.1 F17J6.12/F17J6.12 {... 114 1e-25
BM813961 homologue to GP|13365610|db SCARECROW {Pisum sativum}, ... 100 2e-21
TC82600 similar to GP|9757937|dbj|BAB08425.1 SCARECROW gene regu... 99 3e-21
TC80602 similar to GP|14517552|gb|AAK62666.1 F17J6.12/F17J6.12 {... 91 1e-18
TC77895 similar to GP|18087577|gb|AAL58919.1 AT4g00150/F6N15_20 ... 90 2e-18
BE205257 similar to PIR|T45848|T45 hypothetical protein F3A4.30 ... 90 2e-18
TC80047 similar to GP|18087577|gb|AAL58919.1 AT4g00150/F6N15_20 ... 87 1e-17
>BG587215 similar to GP|8453100|gb| short-root protein {Arabidopsis
thaliana}, partial (31%)
Length = 651
Score = 293 bits (751), Expect = 8e-80
Identities = 150/233 (64%), Positives = 177/233 (75%)
Frame = +3
Query: 44 HYYNQQEEDEECFNNFYYMDHNNNNDEDLSSSSSKQHYYTYPYASTTTITTPNTTYNTIN 103
H QE +EECFN ++MD +EDLSSSSSK HYY Y T+ T NT ++
Sbjct: 6 HILQSQEVEEECFN--FFMD-----EEDLSSSSSK-HYYPYNQPQTSNTITTNTPTTSLT 161
Query: 104 TPTTTDNYSFSPSHDYFNFEFSGHSWSQNILLETARAFSDNNTNRIQQLMWMLNELSTPY 163
P T + F FE +G W+ NILLETARA ++ N+ R+QQLMWMLNELS+PY
Sbjct: 162 PPPPTAD---------FTFELTGR-WANNILLETARAIAEKNSTRLQQLMWMLNELSSPY 311
Query: 164 GDTDQKLSSYFLQALFSRMNDAGDRTYKTLTTASEKTCSFDSTRKMLLKFQEVSPWTTFG 223
GD +QKL++YFLQALFSRM +AG RT++TL +ASEKTCSF+STRK +LKFQEVSPWTTFG
Sbjct: 312 GDIEQKLAAYFLQALFSRMTEAGTRTFRTLASASEKTCSFESTRKTVLKFQEVSPWTTFG 491
Query: 224 HVAANGAILEALEGNPKLHIIDISNTYCTQWPTLLEALATRSDDTPHLRLTTV 276
HVA NGAILEA EG+ KLHIIDISNTYCTQWPTL EALATR+DDTPHLRLTT+
Sbjct: 492 HVACNGAILEAFEGDSKLHIIDISNTYCTQWPTLFEALATRADDTPHLRLTTI 650
>AW685610 similar to GP|18491223|gb| putative SHORT-ROOT (SHR) protein
{Arabidopsis thaliana}, partial (19%)
Length = 501
Score = 206 bits (525), Expect = 1e-53
Identities = 106/156 (67%), Positives = 124/156 (78%), Gaps = 9/156 (5%)
Frame = +1
Query: 315 DLRELNLCDLDIKEDEALAINCVNSLHSIS------GAGNHRDLFISLLRGLEPRVLTIV 368
DL +LN DLDIKEDEALA+NCVN+LHS++ N RD I+ L L PR++T+V
Sbjct: 16 DLSDLNFLDLDIKEDEALAVNCVNALHSVTVGNGNGNGNNRRDSLIASLIALRPRIVTMV 195
Query: 369 EEEADLEVCFGSD---FVEGFKECLRWFRVYFEALDESFSRTSSERLMLEREAGRGIVDL 425
EEEADL FG++ FV GF+ECLRWFRVYFEAL+ESF +TS+ERLMLEREAGRGIVDL
Sbjct: 196 EEEADLN--FGNEGYEFVNGFEECLRWFRVYFEALEESFPKTSNERLMLEREAGRGIVDL 369
Query: 426 VACDPYESVERRETAARWRRRLHGGGFNTVSFSDEV 461
VAC P ES+ERRETA RW RRLHG GFNTV+FS+EV
Sbjct: 370 VACAPAESIERRETAVRWSRRLHGRGFNTVAFSEEV 477
>BE326037 similar to GP|18491223|gb putative SHORT-ROOT (SHR) protein
{Arabidopsis thaliana}, partial (23%)
Length = 646
Score = 188 bits (478), Expect(2) = 2e-52
Identities = 102/178 (57%), Positives = 126/178 (70%), Gaps = 2/178 (1%)
Frame = -1
Query: 242 HIIDISNTYCTQWPTLLEALATRSDDTPHLRLTTVVTAISGGSVQKVMKEIGSRMEKFAR 301
HIIDISNT CTQWPTLLEALATR+D+TPHL+LT VVT S V VMKE+G RMEKFAR
Sbjct: 568 HIIDISNTLCTQWPTLLEALATRNDETPHLKLTIVVTNNSSSVV--VMKEVGQRMEKFAR 395
Query: 302 LMGVPFKFKII--FSDLRELNLCDLDIKEDEALAINCVNSLHSISGAGNHRDLFISLLRG 359
LMGVPF+ +I +REL L I+E EA+A+NCV +L + R+ + +
Sbjct: 394 LMGVPFELNVISDLKHIRELTKERLGIQEGEAIALNCVGALRKVE--VEERESVVQFFKS 221
Query: 360 LEPRVLTIVEEEADLEVCFGSDFVEGFKECLRWFRVYFEALDESFSRTSSERLMLERE 417
L PRV+T VEEE D DFV+ F+ECL+++R+YFE L+ESF TS+ERLMLERE
Sbjct: 220 LSPRVVTFVEEEGDF---CSDDFVKCFEECLKFYRIYFEMLEESFPPTSNERLMLERE 56
Score = 36.2 bits (82), Expect(2) = 2e-52
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = -3
Query: 222 FGHVAANGAILEALEGNPKL 241
FGHVA+NGAILEAL+G KL
Sbjct: 629 FGHVASNGAILEALDGEKKL 570
>TC77707 weakly similar to GP|8777405|dbj|BAA96995.1 SCARECROW gene
regulator-like {Arabidopsis thaliana}, partial (65%)
Length = 2161
Score = 197 bits (500), Expect = 1e-50
Identities = 122/380 (32%), Positives = 198/380 (52%), Gaps = 8/380 (2%)
Frame = +2
Query: 131 QNILLETARAFSDNNTNRIQQLMWMLNELSTPYGDTDQKLSSYFLQALFSRMNDAGDRTY 190
+ +L+ A+A ++NNT +L+ + G+ Q+L +Y ++ L +R +G+ Y
Sbjct: 869 KQLLIACAKAMAENNTELFDRLIETARNAVSINGEPIQRLGAYMVEGLVARTEASGNSIY 1048
Query: 191 KTLTTASEKTCSFDSTRKMLLKFQ---EVSPWTTFGHVAANGAILEALEGNPKLHIIDIS 247
L C ++L Q E+ P+ FG++AANGAI EA +HIID
Sbjct: 1049 HALK------CREPEGEELLTYMQLLFEICPYLKFGYMAANGAIAEACRNEDHIHIIDFQ 1210
Query: 248 NTYCTQWPTLLEALATRSDDTPHLRLTTVVTAISGGSVQKVMKEIGSRMEKFARLMGVPF 307
TQW TLL+ALA R PH+R+T + +S + K ++ +G R+ ++ G+P
Sbjct: 1211 IAQGTQWMTLLQALAARPGGAPHVRITGIDDPVSKYARGKGLEVVGERLSLMSKKFGIPV 1390
Query: 308 KFKIIFSDLRELNLCDLDIKEDEALAINCVNSLHSIS----GAGNHRDLFISLLRGLEPR 363
+F I ++ LDI+ EALA+N LH + N RD + L++ L P+
Sbjct: 1391 EFHGIPVFGPDVTRDMLDIRHGEALAVNFPLQLHHTADESVDVNNPRDGLLRLVKSLSPK 1570
Query: 364 VLTIVEEEADLEVCFGSDFVEGFKECLRWFRVYFEALDESFSRTSSERLMLEREA-GRGI 422
V+T+VE+E++ + F F E L ++ FE++D + SR S ER+ +E+ R I
Sbjct: 1571 VVTLVEQESNTNT---TPFFNRFIETLDYYLAIFESIDVTLSRNSKERINVEQHCLARDI 1741
Query: 423 VDLVACDPYESVERRETAARWRRRLHGGGFNTVSFSDEVCDDVRALLRRYKEGWSMTSSD 482
V+++AC+ E VER E +W+ RL GF S V +R+LLR Y E +++ D
Sbjct: 1742 VNVIACEGKERVERHELFGKWKSRLTMAGFRQCPLSSYVNSVIRSLLRCYSEHYTLVEKD 1921
Query: 483 GDTGIFLSWKDKPVVWASVW 502
G + L WK + ++ AS W
Sbjct: 1922 G--AMLLGWKSRNLISASAW 1975
>TC77716 similar to GP|20465587|gb|AAM20276.1 unknown protein {Arabidopsis
thaliana}, partial (63%)
Length = 2392
Score = 194 bits (493), Expect = 7e-50
Identities = 131/455 (28%), Positives = 226/455 (48%), Gaps = 5/455 (1%)
Frame = +3
Query: 54 ECFNNFYYMDHNNNNDEDLSSSSSKQHYYTYPYASTTTITTPNTTYNTINTPTTTDNYSF 113
EC N H+++ E LSS S+ ++T +T + N TP
Sbjct: 768 ECANPIQNKSHHDSPKESLSSDSNL----------SSTSSTKEISQNFPRTP-------- 893
Query: 114 SPSHDYFNFEFSGHSWSQNILLETARAFSDNNTNRIQQLMWMLNELSTPYGDTDQKLSSY 173
+ +L E A A S+ N + ++ L +L + G+ ++++Y
Sbjct: 894 -----------------KQLLYECASALSEGNEVKASAMIDDLRQLVSIQGEPSDRIAAY 1022
Query: 174 FLQALFSRMNDAGDRTYKTLTTASEKTCSFDSTRKMLLKFQEVSPWTTFGHVAANGAILE 233
++ L +R+ +G YK L ++ S D M + F EV P FG +AANGAI E
Sbjct: 1023 MVEGLAARLASSGKCIYKALKC--KEPPSSDRLAAMQILF-EVCPCFKFGFIAANGAISE 1193
Query: 234 ALEGNPKLHIIDISNTYCTQWPTLLEALATRSDDTPHLRLTTVVTAISGGSVQKVMKEIG 293
A++ + K+HIID +Q+ TL++ LA+R P++RLT V S + IG
Sbjct: 1194 AIKDDKKVHIIDFDINQGSQYITLIQTLASRPGKPPYVRLTGVDDPESVQRSVGGLSIIG 1373
Query: 294 SRMEKFARLMGVPFKFKIIFSDLRELNLCDLDIKEDEALAINCVNSLHSISGAG----NH 349
R+EK A ++G+PF+F+ + S + L+ + EAL +N LH + N
Sbjct: 1374 QRLEKLAEVLGLPFEFRAVASRSSIVTPSMLNCRPGEALVVNFAFQLHHMPDESVSTVNE 1553
Query: 350 RDLFISLLRGLEPRVLTIVEEEADLEVCFGSDFVEGFKECLRWFRVYFEALDESFSRTSS 409
RD + +++ L P+++T+VE++ + S F+ F E ++ FE+LD + R S
Sbjct: 1554 RDQLLRMVKSLNPKLVTVVEQDVNTNT---SPFLPRFVEAYNYYSAVFESLDATLPRESQ 1724
Query: 410 ERLMLEREA-GRGIVDLVACDPYESVERRETAARWRRRLHGGGFNTVSFSDEVCDDVRAL 468
+R+ +ER+ R IV+++AC+ + +ER E A +WR R+ GF + S V + +R L
Sbjct: 1725 DRVNVERQCLARDIVNVIACEGEDRIERYEVAGKWRARMKMAGFTSSPMSTNVKEAIREL 1904
Query: 469 LRRYKEGWSMTSSDGDTGIFLSWKDKPVVWASVWR 503
+R+Y + + + G G+ W+DK ++ AS W+
Sbjct: 1905 IRQYCDKYKIIEEMG--GLHFGWEDKNLIVASAWK 2003
>TC79190 similar to PIR|E96542|E96542 scarecrow-like protein [imported] -
Arabidopsis thaliana, partial (64%)
Length = 1669
Score = 186 bits (473), Expect = 1e-47
Identities = 135/499 (27%), Positives = 241/499 (48%), Gaps = 12/499 (2%)
Frame = +2
Query: 17 YQPDPSLNSTTTLTTSSSSRSSRQTTYHYYNQQEEDEECFNNFYYMDHNNNNDEDLSSSS 76
YQ PS +S + S S Q + + N E+E+ + Y DH +DL
Sbjct: 119 YQNSPSTHSFSP-NNSPGSTLRPQHSLEFVNGSPEEEDSY--LIYHDH-----DDLRHKM 274
Query: 77 SKQHYYTYPYASTTTITTPNTTY-NTINTPTTTDNYSFSPSHDYF--NFEFSGHSWSQNI 133
S+ + + PN +T ++ SF + + N E + +
Sbjct: 275 SELE---------SVMRGPNVEMLEMYDTKVQEESASFLLEAEKWKKNVEMVSRGDLKEM 427
Query: 134 LLETARAFSDNNTNRIQQLMWMLNELSTPYGDTDQKLSSYFLQALFSRMNDAGDRTYKTL 193
L A+A +N+ I+ ++ L ++ + G ++L +Y L+AL S++ +G YK+L
Sbjct: 428 LYTCAKAVDENDIETIEWMVTELRKIVSVSGSPIERLGAYMLEALVSKIASSGSTIYKSL 607
Query: 194 TTASEKTCSFDSTRKMLLKFQ----EVSPWTTFGHVAANGAILEALEGNPKLHIIDISNT 249
CS + T LL + E+ P+ FG+++ANGAI EA++ ++HIID
Sbjct: 608 K------CS-EPTGNELLSYMHVLYEICPYFKFGYMSANGAIAEAMKEENEVHIIDFQIG 766
Query: 250 YCTQWPTLLEALATRSDDTPHLRLTTVVTAISGGSVQKVMKEIGSRMEKFARLMGVPFKF 309
TQW +L++ALA R P +R+T + + S + +G ++ A+ VPF+F
Sbjct: 767 QGTQWVSLIQALARRPGGPPKIRITGIDDSYSSNVRGGGVDIVGEKLLTLAQSCHVPFEF 946
Query: 310 KIIFSDLRELNLCDLDIKEDEALAINCVNSLHSISGAG----NHRDLFISLLRGLEPRVL 365
+ E+ L D +++ +EA+A+N LH + NHRD + L + + P+V+
Sbjct: 947 HAVRVYPSEVRLEDFELRPNEAVAVNFAIMLHHVPDESVNIHNHRDRLLRLAKHMSPKVV 1126
Query: 366 TIVEEEADLEVCFGSDFVEGFKECLRWFRVYFEALDESFSRTSSERLMLEREA-GRGIVD 424
T+VE+E + + F++ F E + ++ +E++D R ER+ +E+ R +V+
Sbjct: 1127TLVEQEFNTN---NAPFLQRFLETMNYYSAVYESIDVVLPRDHKERINVEQHCLAREVVN 1297
Query: 425 LVACDPYESVERRETAARWRRRLHGGGFNTVSFSDEVCDDVRALLRRYKEGWSMTSSDGD 484
LVAC+ E VER E ++WR R GF S + ++ LL Y+ +++ DG
Sbjct: 1298LVACEGEERVERHELLSKWRMRFTMAGFTPYPLSSFINSSIKNLLESYRGHYTLEERDG- 1474
Query: 485 TGIFLSWKDKPVVWASVWR 503
+FL W ++ ++ + WR
Sbjct: 1475-ALFLGWMNQDLIASCAWR 1528
>TC86258 similar to GP|16930433|gb|AAL31902.1 AT4g17230/dl4650c {Arabidopsis
thaliana}, partial (62%)
Length = 2237
Score = 175 bits (443), Expect = 4e-44
Identities = 115/380 (30%), Positives = 197/380 (51%), Gaps = 8/380 (2%)
Frame = +3
Query: 131 QNILLETARAFSDNNTNRIQQLMWMLN---ELSTPYGDTDQKLSSYFLQALFSRMNDAGD 187
+ +LL A+A SD + + WM N ++ + GD Q+LS+Y L+ L +R+ +G
Sbjct: 864 KEVLLLCAQAVSDGDIPTARG--WMDNVLVKMVSVAGDPIQRLSAYLLEGLRARLELSGS 1037
Query: 188 RTYKTLTTASEKTCSFDSTRKMLLKFQEVSPWTTFGHVAANGAILEALEGNPKLHIIDIS 247
YK+L E+ S + M + +Q + P+ F +++AN I EA+ ++HIID
Sbjct: 1038 LIYKSLKC--EQPTSKELMTYMHMLYQ-ICPYFKFAYISANAVISEAMANESRIHIIDFQ 1208
Query: 248 NTYCTQWPTLLEALATRSDDTPHLRLTTVVTAISGGSVQKVMKEIGSRMEKFARLMGVPF 307
TQW L+EALA R P +R+T V + S + ++ +G ++ FAR GV F
Sbjct: 1209 IAQGTQWQMLIEALARRPGGPPFIRITGVDDSQSFHARGGGLQIVGEQLSNFARSRGVLF 1388
Query: 308 KFKIIFSDLRELNLCDLDIKEDEALAINCVNSLHSISGAG----NHRDLFISLLRGLEPR 363
+F E+ +L + EALA+N SLH + NHRD + L++ L P+
Sbjct: 1389 EFHSAAMSGCEVQRENLRVSPGEALAVNFPFSLHHMPDESVSIENHRDRLLRLVKSLSPK 1568
Query: 364 VLTIVEEEADLEVCFGSDFVEGFKECLRWFRVYFEALDESFSRTSSERLMLERE-AGRGI 422
V+T+VE+E++ S F + F E + ++ FE++D + ++ +R+ +E+ R I
Sbjct: 1569 VVTLVEQESNTNT---SPFFQRFVETMDFYTAMFESIDVACTKDDKKRISVEQNCVARDI 1739
Query: 423 VDLVACDPYESVERRETAARWRRRLHGGGFNTVSFSDEVCDDVRALLRRYKEGWSMTSSD 482
V+++AC+ E VER E +WR R GF S V V+ +L+ + + + + D
Sbjct: 1740 VNMIACEGIERVERHEVFGKWRSRFSMAGFRQCQLSSSVMHSVQNMLKDFHQNYWLEHRD 1919
Query: 483 GDTGIFLSWKDKPVVWASVW 502
G ++L W + + +S W
Sbjct: 1920 G--ALYLGWMKRAMATSSAW 1973
>TC77063 similar to GP|20334379|gb|AAM19210.1 GAI-like protein 1 {Vitis
vinifera}, partial (71%)
Length = 1762
Score = 164 bits (414), Expect = 1e-40
Identities = 120/449 (26%), Positives = 204/449 (44%), Gaps = 11/449 (2%)
Frame = +3
Query: 66 NNNDEDLSSSSSKQHYYTYPYAS--------TTTITTPNTTYNTINTPTTTDNYSFSPSH 117
N++D DL++ K Y + S + T+TT +TT I T + H
Sbjct: 432 NSDDNDLNAIPGKAIYAADEFTSRKRVKRNESVTVTTESTTTRPIMVVETQEK-GIRLVH 608
Query: 118 DYFNFEFSGHSWSQNILLETARAFSDNNTNRIQQLMWMLNELSTPYGDTDQKLSSYFLQA 177
L+ A A NN + L+ + L+ +K+++YF +
Sbjct: 609 S---------------LMACAEAVEQNNLKMAEALVKQIGYLAVSQEGAMRKVATYFAEG 743
Query: 178 LFSRMNDAGDRTYKTLTTASEKTCSFDSTRKMLLKFQEVSPWTTFGHVAANGAILEALEG 237
L R+ Y S + + F E P F H AN AILEA +G
Sbjct: 744 LARRI-------YGVFPQHSVSD-------SLQIHFYETCPNLKFAHFTANQAILEAFQG 881
Query: 238 NPKLHIIDISNTYCTQWPTLLEALATRSDDTPHLRLTTVVTAISGGSVQKVMKEIGSRME 297
+H+ID S QWP L++ALA R P RLT + S S ++++G R+
Sbjct: 882 KSSVHVIDFSINQGMQWPALMQALALRPGGPPAFRLTGIGPPASDNSDH--LQQVGWRLA 1055
Query: 298 KFARLMGVPFKFK-IIFSDLRELNLCDLDIK--EDEALAINCVNSLHSISGAGNHRDLFI 354
+FA+ + V F+++ + + L +L+ L+++ E E++A+N V LH ++ +
Sbjct: 1056QFAQTIHVQFEYRGFVANSLADLDASMLELRSPETESVAVNSVFELHKLNARPGALEKVF 1235
Query: 355 SLLRGLEPRVLTIVEEEADLEVCFGSDFVEGFKECLRWFRVYFEALDESFSRTSSERLML 414
S++R + P ++T+VE+EA+ G F++ F E L ++ F++L+ S S ++ M
Sbjct: 1236SVIRQIRPEIVTVVEQEANHN---GPAFLDRFTESLHYYSTLFDSLEGS-SVEPQDKAMS 1403
Query: 415 EREAGRGIVDLVACDPYESVERRETAARWRRRLHGGGFNTVSFSDEVCDDVRALLRRYKE 474
E G+ I ++VAC+ + VER ET +WR R + GF+ V LL +
Sbjct: 1404EVYLGKQICNVVACEGTDRVERHETLNQWRNRFNSAGFSPVHLGSNAFKQASMLLALFAG 1583
Query: 475 GWSMTSSDGDTGIFLSWKDKPVVWASVWR 503
G + D + L W +P++ S W+
Sbjct: 1584GDGYKVEENDGCLMLGWHTRPLIATSAWK 1670
>TC76809 similar to GP|20334379|gb|AAM19210.1 GAI-like protein 1 {Vitis
vinifera}, partial (72%)
Length = 2764
Score = 152 bits (384), Expect = 3e-37
Identities = 106/384 (27%), Positives = 184/384 (47%), Gaps = 14/384 (3%)
Frame = +2
Query: 134 LLETARAFSDNNTNRIQQLMWMLNELSTPYGDTDQKLSSYFLQALFSRMNDAGDRTYKTL 193
L+ A A N + L+ ++ L++ +K++SYF QAL R+ + T +
Sbjct: 1376 LMACAEAIQQKNLKLAEALVKHISLLASLQTGAMRKVASYFAQALARRIYGNPEETIDS- 1552
Query: 194 TTASEKTCSFDSTRKMLLKFQEVSPWTTFGHVAANGAILEALEGNPKLHIIDISNTYCTQ 253
SF M F E SP+ F H AN AILEA G ++H+ID Q
Sbjct: 1553 --------SFSEILHM--HFYESSPYLKFAHFTANQAILEAFAGAGRVHVIDFGLKQGMQ 1702
Query: 254 WPTLLEALATRSDDTPHLRLTTVVTAISGGSVQKVMKEIGSRMEKFARLMGVPFKFK-II 312
WP L++ALA R P RLT + + + ++++G ++ + A+ +GV F+F+ +
Sbjct: 1703 WPALMQALALRPGGPPTFRLTGIGPPQADNT--DALQQVGWKLAQLAQTIGVQFEFRGFV 1876
Query: 313 FSDLRELNLCDLDIKEDEALAINCVNSLHSISGAGNHRDLFISLLRGLEPRVLTIVEEEA 372
+ + +L+ L+I+ EA+A+N V LH++ + ++ ++ + P+++TIVE+EA
Sbjct: 1877 CNSIADLDPNMLEIRPGEAVAVNSVFELHTMLARPGSVEKVLNTVKKINPKIVTIVEQEA 2056
Query: 373 DLEVCFGSDFVEGFKECLRWFRVYFEALDESFSRT-------------SSERLMLEREAG 419
+ G FV+ F E L ++ F++L+ S S + S + LM E G
Sbjct: 2057 NHN---GPVFVDRFTEALHYYSSLFDSLEGSNSSSNNSNSNSTGLGSPSQDLLMSEIYLG 2227
Query: 420 RGIVDLVACDPYESVERRETAARWRRRLHGGGFNTVSFSDEVCDDVRALLRRYKEGWSMT 479
+ I ++VA + + VER ET +WR R+ GF V LL + G
Sbjct: 2228 KQICNVVAYEGVDRVERHETLTQWRSRMGSAGFEPVHLGSNAFKQASTLLALFAGGDGYR 2407
Query: 480 SSDGDTGIFLSWKDKPVVWASVWR 503
+ + + L W + ++ S W+
Sbjct: 2408 VEENNGCLMLGWHTRSLIATSAWK 2479
>TC78035 similar to GP|8778540|gb|AAF79548.1| F22G5.9 {Arabidopsis thaliana},
partial (24%)
Length = 2694
Score = 148 bits (374), Expect = 4e-36
Identities = 110/380 (28%), Positives = 177/380 (45%), Gaps = 6/380 (1%)
Frame = +3
Query: 131 QNILLETARAFSDNNTNRIQQLMWMLNELSTPYGDTDQKLSSYFLQALFSRMNDAGDRTY 190
+ +L+ A+A S N+ +L+ + S+P GD Q+++ YF A+ +RM AG T
Sbjct: 1191 RTLLVLCAQAVSANDNRTANELLKQIRNHSSPSGDASQRMAHYFANAIEARMVGAGTGTQ 1370
Query: 191 KTLTTASEKTCSFDSTRKMLLKFQEVSPWTTFGHVAANGAILEALEGNPKLHIIDISNTY 250
+ S+K S K F P+ F H AN IL+ E LHIID Y
Sbjct: 1371 --ILYMSQKMFSAADFLKAYQVFISACPFKKFAHFFANKMILKTAEKAETLHIIDFGILY 1544
Query: 251 CTQWPTLLEALATRSDDTPHLRLTTVVTAISGGSVQKVMKEIGSRMEKFARLMGVPFKFK 310
QWP L++ L+ P LR+T + +G + ++E G R+ + V F++K
Sbjct: 1545 GFQWPILIKFLSKVEGGPPKLRITGIEYPQAGFRPAERIEETGRRLANYCERFNVSFEYK 1724
Query: 311 IIFS-DLRELNLCDLDIKEDEALAINCV---NSLHSIS-GAGNHRDLFISLLRGLEPRVL 365
I S + + + DL+IK +E +A+NC+ +LH + + +D + L+R + P +
Sbjct: 1725 AIPSRNWETIQIEDLNIKSNEVVAVNCLVRFKNLHDETIDVNSPKDAVLKLIRKINPHIF 1904
Query: 366 TIVEEEADLEVCFGSDFVEGFKECLRWFRVYFEALDESFSRTSSERLMLERE-AGRGIVD 424
F F FKE L + F+ D SR + R M+ERE GR I++
Sbjct: 1905 VQSIVNGSYNAPF---FSTRFKESLFHYSAMFDMYDTLISRENEWRSMIEREFLGREIMN 2075
Query: 425 LVACDPYESVERRETAARWRRRLHGGGFNTVSFSDEVCDDVRALLRRYKEGWSMTSSDGD 484
+VAC+ +E VER ET +W+ R GF + EV R LR + + +
Sbjct: 2076 VVACEGFERVERPETYKQWQVRNLRAGFRQLPLDKEVMVRFRDKLREWYHK-DFVFDEDN 2252
Query: 485 TGIFLSWKDKPVVWASVWRP 504
+ WK + + ++ W P
Sbjct: 2253 NWMLQGWKGRIMYASAGWVP 2312
>TC90677 similar to GP|8453100|gb|AAF75234.1| short-root protein
{Arabidopsis thaliana}, partial (12%)
Length = 650
Score = 119 bits (299), Expect(2) = 3e-32
Identities = 56/78 (71%), Positives = 68/78 (86%)
Frame = +3
Query: 157 NELSTPYGDTDQKLSSYFLQALFSRMNDAGDRTYKTLTTASEKTCSFDSTRKMLLKFQEV 216
NELS+PYGD DQKL+SYFLQALFS+ +G + YKTL++ + K+ SFDS RK++LKFQEV
Sbjct: 417 NELSSPYGDIDQKLASYFLQALFSKATQSGHKCYKTLSSIAYKSHSFDSARKLILKFQEV 596
Query: 217 SPWTTFGHVAANGAILEA 234
SPWTTFGHVA+NGAILEA
Sbjct: 597 SPWTTFGHVASNGAILEA 650
Score = 37.4 bits (85), Expect(2) = 3e-32
Identities = 22/103 (21%), Positives = 48/103 (46%)
Frame = +2
Query: 57 NNFYYMDHNNNNDEDLSSSSSKQHYYTYPYASTTTITTPNTTYNTINTPTTTDNYSFSPS 116
+N Y ++ N ++S +H + + + +T + ++T ++ S S
Sbjct: 119 SNMYPKENQNMEISPYNTSKKTKHLEKLNHQNNSYFLHEASTIDMMHTSSSNHQTSSDNS 298
Query: 117 HDYFNFEFSGHSWSQNILLETARAFSDNNTNRIQQLMWMLNEL 159
+ + + G WS +L E A A S+ ++++I L+WML +
Sbjct: 299 SETCHRDQDG-KWSSKLLKECAIAISNRDSSKIHHLLWMLKRV 424
>BG586348 similar to GP|20465587|gb unknown protein {Arabidopsis thaliana},
partial (33%)
Length = 755
Score = 121 bits (304), Expect = 5e-28
Identities = 72/244 (29%), Positives = 129/244 (52%), Gaps = 5/244 (2%)
Frame = +1
Query: 256 TLLEALATRSDDTPHLRLTTVVTAISGGSVQKVMKEIGSRMEKFARLMGVPFKFKIIFSD 315
TL++ LA+RS H+RLT + S +K IG R+E+ A +G+ F+F+ + S
Sbjct: 10 TLIQTLASRSCKPSHVRLTGIDDPESVQRSIGGLKIIGQRLEQLAETLGLSFEFRAVSSR 189
Query: 316 LRELNLCDLDIKEDEALAINCVNSLHSISGAG----NHRDLFISLLRGLEPRVLTIVEEE 371
+ L+ + EAL +N LH + N RD + L++ L P+++T+VE++
Sbjct: 190 TSIVTSSMLNCRRGEALVVNFAFQLHHMPDESVSTVNERDQLLRLVKSLNPKLVTVVEQD 369
Query: 372 ADLEVCFGSDFVEGFKECLRWFRVYFEALDESFSRTSSERLMLEREA-GRGIVDLVACDP 430
+ + F++ F E ++ FE+LD + R S +R+ +ER+ R IV+ VAC+
Sbjct: 370 VNTNT---APFLQRFVEAYNYYSAVFESLDFTLPRESQDRMNVERQCLARDIVNTVACEG 540
Query: 431 YESVERRETAARWRRRLHGGGFNTVSFSDEVCDDVRALLRRYKEGWSMTSSDGDTGIFLS 490
+ +ER E A +WR R+ GF++ S V D+++ ++ Y + + + G +
Sbjct: 541 EDRIERYEVAGKWRARMTMAGFSSSPMSTNVSDEIQKQVKLYCDRYKIKEEKG--ALHFG 714
Query: 491 WKDK 494
W+DK
Sbjct: 715 WEDK 726
>TC89212 weakly similar to PIR|T02531|T02531 probable SCARECROW gene
regulator At2g37650 [imported] - Arabidopsis thaliana,
partial (37%)
Length = 1266
Score = 116 bits (291), Expect = 2e-26
Identities = 87/345 (25%), Positives = 151/345 (43%), Gaps = 5/345 (1%)
Frame = +1
Query: 163 YGDTDQKLSSYFLQALFSRMNDAGDRTYKTLTTASEKTCSFDSTRKMLLKFQEVSPWTTF 222
+GD Q+L+ YF L R+ A +Y+ L A+ K F SP
Sbjct: 1 FGDGLQRLAHYFANGLEIRLA-AETPSYQPLDVATA-----GDMLKAYKLFVTASPLQRV 162
Query: 223 GHVAANGAILEALEGNPKLHIIDISNTYCTQWPTLLEALATRSDDTPHLRLTTVVTAISG 282
+ I + ++ +H+ID Y QWP L+ L+ R P LR+T + G
Sbjct: 163 TNTLLTKTIFKIVKNESSVHVIDFGICYGFQWPCLVRRLSLRPGGPPKLRITGIELPQPG 342
Query: 283 GSVQKVMKEIGSRMEKFARLMGVPFKFKIIFSDLRELNLCDLDIKEDEALAINCVNSLHS 342
+ ++E G R+ K+ + VPF++ I + L DL I +E ++C+ L +
Sbjct: 343 FRPTERVEETGRRLAKYCKKFNVPFEYNFIAQKWETVCLEDLKIDRNEITLVSCLYRLKN 522
Query: 343 IS----GAGNHRDLFISLLRGLEPRVLTIVEEEADLEVCFGSDFVEGFKECLRWFRVYFE 398
+ R+ + L+R + P++ F F+ FKE L F F+
Sbjct: 523 LPDETVALNCPREAVLKLIRKINPKIFFHGVVNGSYSAPF---FLTRFKEALYHFSSLFD 693
Query: 399 ALDESFSRTSSERLMLEREA-GRGIVDLVACDPYESVERRETAARWRRRLHGGGFNTVSF 457
+ + +RLMLER GR ++++AC+ E VER ET +W+ R GF + F
Sbjct: 694 MFEANVPCEDPQRLMLERGLFGRDAINVIACEGAERVERPETYKQWQVRNKRAGFRQIRF 873
Query: 458 SDEVCDDVRALLRRYKEGWSMTSSDGDTGIFLSWKDKPVVWASVW 502
++ ++ +A++++ + DG + WK + + S W
Sbjct: 874 DSDLVNETKAMVKKEYHKDFVVDVDG-KWVLQGWKGRILNALSAW 1005
>TC79937 similar to GP|14517552|gb|AAK62666.1 F17J6.12/F17J6.12 {Arabidopsis
thaliana}, partial (28%)
Length = 886
Score = 114 bits (284), Expect = 1e-25
Identities = 66/214 (30%), Positives = 110/214 (50%), Gaps = 6/214 (2%)
Frame = +3
Query: 296 MEKFARLMGVPFKFKIIFSDLRELNLCDLDIKEDEALAINCVNSLH-----SISGAGNHR 350
+ K A V F+F I E+ L DL+++ EA+A+N LH + G NHR
Sbjct: 3 LSKLAESYNVAFEFHAIGVSPSEVRLEDLELRRGEAIAVNFAMMLHHVPDEDVHGGKNHR 182
Query: 351 DLFISLLRGLEPRVLTIVEEEADLEVCFGSDFVEGFKECLRWFRVYFEALDESFSRTSSE 410
D + L + L P+V+T+VE+E++ F F E + ++ FE++D + R E
Sbjct: 183 DRLVRLAKCLSPKVVTLVEQESNTNEL---PFFARFVETMNYYFAVFESIDVALPREHRE 353
Query: 411 RLMLEREA-GRGIVDLVACDPYESVERRETAARWRRRLHGGGFNTVSFSDEVCDDVRALL 469
R+ +E+ R +V+LVAC+ E VER E +WR GF S + ++ LL
Sbjct: 354 RINVEQHCLAREVVNLVACEGAERVERHEVLKKWRSCFTMAGFTPYPLSSYINYSIQNLL 533
Query: 470 RRYKEGWSMTSSDGDTGIFLSWKDKPVVWASVWR 503
Y+ +++ DG ++L W ++P++ +S WR
Sbjct: 534 ENYQGHYTLQEKDG--ALYLGWMNQPLITSSAWR 629
>BM813961 homologue to GP|13365610|db SCARECROW {Pisum sativum}, partial
(21%)
Length = 550
Score = 100 bits (248), Expect = 2e-21
Identities = 58/180 (32%), Positives = 99/180 (54%), Gaps = 3/180 (1%)
Frame = -2
Query: 133 ILLETARAFSDNNTNRIQQLMWMLNELSTPYGDTDQKLSSYFLQALFSRMNDAGDRTYKT 192
+LL+ A A S N ++ +++ +++LSTP+G + Q++++YF +A+ +R+ + R Y T
Sbjct: 546 LLLQCAEAVSAENLDQANKMLLEISQLSTPFGTSAQRVAAYFSEAISARLVSSCLRIYAT 367
Query: 193 L---TTASEKTCSFDSTRKMLLKFQEVSPWTTFGHVAANGAILEALEGNPKLHIIDISNT 249
L T ++K S F +SP+ F H AN AI EA + ++HIID+
Sbjct: 366 LPPHTLHNQKVASAFQV------FNGISPFVKFSHFTANQAIQEAFDREERVHIIDLDIM 205
Query: 250 YCTQWPTLLEALATRSDDTPHLRLTTVVTAISGGSVQKVMKEIGSRMEKFARLMGVPFKF 309
QWP L LA+R P++RLT + G+ + ++ G R+ FA +G+PF+F
Sbjct: 204 QGLQWPGLFHILASRPGGPPYVRLTGL------GTSMETLEATGKRLSDFASKLGLPFEF 43
>TC82600 similar to GP|9757937|dbj|BAB08425.1 SCARECROW gene regulator-like
protein {Arabidopsis thaliana}, partial (51%)
Length = 1141
Score = 99.4 bits (246), Expect = 3e-21
Identities = 64/219 (29%), Positives = 119/219 (54%), Gaps = 5/219 (2%)
Frame = +2
Query: 133 ILLETARAFSDNNTNRIQQLMWMLNELSTPYGDTDQKLSSYFLQALFSRMNDAGDRTYKT 192
+LL+ A + +N + L+ + ELS+P+G + +++ +YF QAL +R+ + +Y
Sbjct: 506 LLLQCAECVAMDNLDFANDLLPEITELSSPFGTSPERVGAYFAQALQARVVSSCLGSYSP 685
Query: 193 LTTASEKTCSFDSTRKMLLKFQE---VSPWTTFGHVAANGAILEALEGNPKLHIIDISNT 249
LT K+ + + ++++ FQ VSP F H AN AI +AL+G ++HIID+
Sbjct: 686 LTA---KSVTLNQSQRIFNAFQSYNSVSPLVKFSHFTANQAIFQALDGEDRVHIIDLDIM 856
Query: 250 YCTQWPTLLEALATRSDDTPHLRLTTVVTAISGGSVQKVMKEIGSRMEKFARLMGVPFKF 309
QWP L LA+RS +R+T GS ++++ G R+ FA +G+PF+F
Sbjct: 857 QGLQWPGLFHILASRSKKIRSVRIT------GFGSSSELLESTGRRLADFASSLGLPFEF 1018
Query: 310 KIIFSDLREL-NLCDLDIKEDEALAINCV-NSLHSISGA 346
+ + + L ++ +EA+ ++ + + L+ I+G+
Sbjct: 1019HPVEGKIGSVTEPGQLGVRPNEAIVVHWMHHCLYDITGS 1135
>TC80602 similar to GP|14517552|gb|AAK62666.1 F17J6.12/F17J6.12 {Arabidopsis
thaliana}, partial (31%)
Length = 1190
Score = 90.9 bits (224), Expect = 1e-18
Identities = 49/146 (33%), Positives = 84/146 (56%)
Frame = +2
Query: 131 QNILLETARAFSDNNTNRIQQLMWMLNELSTPYGDTDQKLSSYFLQALFSRMNDAGDRTY 190
++IL A+A +DN+ Q LM L ++ + G+ Q+L +Y L+ L +R++ +G Y
Sbjct: 728 KHILTACAKAIADNDLLMAQWLMDELRQMVSVSGEPIQRLGAYMLEGLVARLSASGSSIY 907
Query: 191 KTLTTASEKTCSFDSTRKMLLKFQEVSPWTTFGHVAANGAILEALEGNPKLHIIDISNTY 250
K+L ++ S +L EV P+ FG+++ANGAI EA++ ++HIID
Sbjct: 908 KSLRCKEPESAELLSYMNILY---EVCPYFKFGYMSANGAIAEAMKNEARVHIIDFQIAQ 1078
Query: 251 CTQWPTLLEALATRSDDTPHLRLTTV 276
+QW +L++A A R PH+R+T +
Sbjct: 1079GSQWISLIQAFAARPGGPPHIRITGI 1156
>TC77895 similar to GP|18087577|gb|AAL58919.1 AT4g00150/F6N15_20 {Arabidopsis
thaliana}, partial (41%)
Length = 2591
Score = 90.1 bits (222), Expect = 2e-18
Identities = 84/389 (21%), Positives = 169/389 (42%), Gaps = 8/389 (2%)
Frame = +3
Query: 123 EFSGHSWSQNI---LLETARAFSDNNTNRIQQLMWMLNELSTPYGDTDQKLSSYFLQALF 179
+ S H + Q I L + A N Q ++ LN +P G Q+ + YF +AL
Sbjct: 1281 DVSAHQFQQAIIDQLFKAAELIDAGNPEHAQGILARLNHQISPMGKPFQRAAFYFKEALQ 1460
Query: 180 ----SRMNDAGDRTYKTLTTASEKTCSFDSTRKMLLKFQEVSPWTTFGHVAANGAILEAL 235
S +N++ + ++ T+ K ++ S F E+SP F + +N A+LEA+
Sbjct: 1461 LLLQSNVNNSNNNSFSP-TSLLLKIGAYKS-------FSEISPVLQFANFTSNQALLEAV 1616
Query: 236 EGNPKLHIIDISNTYCTQWPTLLEALATRSDDTPHLRLTTVVTAISGGSVQKVMKEIGSR 295
EG ++HIID + QW + ++ LA R+ P L++T V+ ++ +
Sbjct: 1617 EGFDRIHIIDFDIGFGGQWSSFMQELALRNGGAPALKITAFVSPSHHDEIE--LSFTNEN 1790
Query: 296 MEKFARLMGVPFKFKIIFSDLRELNLCDLDIKEDEALAINCVNSLHSISGAGNHRDLFIS 355
+ ++A + + F+ +I+ + +++ EA+ +N + S S ++ L +
Sbjct: 1791 LMQYAGEINMSFELEILTLESLNSVSWPQPLRDCEAVVVNL--PICSFSNYPSYLPLVLR 1964
Query: 356 LLRGLEPRVLTIVEEEADLEVCFGSDFVEGFKECLRWFRVYFEALDESFSRTSSERL-ML 414
++ L P+++ ++ D + F + L+ + E+LD + L M+
Sbjct: 1965 FVKQLMPKIVVTLDRSCDRT---DAPFPQHMVFALQSYSGLLESLDAVSVNVHPDVLQMI 2135
Query: 415 EREAGRGIVDLVACDPYESVERRETAARWRRRLHGGGFNTVSFSDEVCDDVRALLRRYKE 474
E+ + ++ + S +R W+ L GF+ ++FS+ L++R
Sbjct: 2136 EKYYLQPAIEKLVLGRLRSQDR---TLPWKNLLLSSGFSPLTFSNFTESQAECLVQRI-P 2303
Query: 475 GWSMTSSDGDTGIFLSWKDKPVVWASVWR 503
G + L W+ K ++ S WR
Sbjct: 2304 GRGFHVEKKQNSLVLCWQRKDLISVSTWR 2390
>BE205257 similar to PIR|T45848|T45 hypothetical protein F3A4.30 -
Arabidopsis thaliana, partial (34%)
Length = 670
Score = 89.7 bits (221), Expect = 2e-18
Identities = 64/195 (32%), Positives = 102/195 (51%), Gaps = 20/195 (10%)
Frame = +2
Query: 169 KLSSYFLQALFSRMNDAGDRTYKTLT----TASEKTCSFDSTRKMLLK---FQEVSPWTT 221
+L+ FL+AL +R G T K L + + + D+ R +++ F +++PW
Sbjct: 2 RLAYSFLRALTNRAVKTG--TCKMLVEQVYSNAHNNLTIDTHRFSVIELANFVDLTPWHR 175
Query: 222 FGHVAANGAILEALEGNPKLHIIDISNTYCTQWPTLLEALATRSDDTPHLRLTTVVTA-- 279
FG+ AAN AILEA EG +HI+D+S+T+C Q PTL++A+A R + P ++LT A
Sbjct: 176 FGYAAANAAILEATEGFSVIHIVDLSSTHCMQIPTLIDAIANRHEVAPLIKLTVSDHANC 355
Query: 280 ----ISGGSVQKVMKEIGSRMEKFARLMGVPFKFKII-------FSDLRELNLCDLDIKE 328
+ + +E+GS++ FAR V +F+++ F+ L E +
Sbjct: 356 NSDQLIPPKLDLSYEELGSKLVNFARSRNVTLEFRVVSSSYTNGFASLIEHLRVQRLVYS 535
Query: 329 DEALAINCVNSLHSI 343
EAL INC LH I
Sbjct: 536 GEALVINCHMMLHYI 580
>TC80047 similar to GP|18087577|gb|AAL58919.1 AT4g00150/F6N15_20
{Arabidopsis thaliana}, partial (30%)
Length = 1357
Score = 87.4 bits (215), Expect = 1e-17
Identities = 82/375 (21%), Positives = 165/375 (43%), Gaps = 5/375 (1%)
Frame = +2
Query: 134 LLETARAFSDNNTNRIQQLMWMLNELSTPYGDTDQKLSSYFLQALFSRMNDAGDRTYKTL 193
L +TA N + Q ++ LN +P G+ Q+ S Y +AL ++ G+ L
Sbjct: 50 LFKTAELIEAGNPVQAQGILARLNHQLSPIGNPFQRASFYMKEALQLMLHSNGNN----L 217
Query: 194 TTASEKTCSFDSTRKMLLKFQEVSPWTTFGHVAANGAILEALEGNPKLHIIDISNTYCTQ 253
T S SF F E+SP F + N +++EALE ++H+ID + Q
Sbjct: 218 TAFSP--ISFIFKIGAYKSFSEISPVLQFANFTCNQSLIEALERFDRIHVIDFDIGFGVQ 391
Query: 254 WPTLLEALATRSDDTPHLRLTTVVTAISGGSVQKVMKEIGSRMEKFARLMGVPFKFKIIF 313
W + ++ + RS+ P L++T VV+ S ++ + + ++A+ + + F+F ++
Sbjct: 392 WSSFMQEIVLRSNGKPSLKITAVVSPSSCNEIE--LNFTQENLSQYAKDLNILFEFNVLN 565
Query: 314 SDLRELNLCDLD---IKEDEALAINCVNSLHSISGAGNHRDLFISLLRGLEPRVLTIVEE 370
+ L C L +EA+ +N + S + + + L+ L P+++ +++
Sbjct: 566 IESLNLPSCPLPGHFFDSNEAIGVNF--PVSSFISNPSCFPVALHFLKQLRPKIVVTLDK 739
Query: 371 EAD-LEVCFGSDFVEGFKECLRWFRVYFEALDESFSRTSSERLMLEREAGRGIVDLVACD 429
D ++V ++ V L+ + E+LD + + +ER + ++ +
Sbjct: 740 NCDRMDVPLPTNVV----HVLQCYSALLESLD-AVNVNLDVLQKIERHYIQPTINKIVLS 904
Query: 430 PYESVERRETAARWRRRLHGGGFNTVSFSDEVCDDVRALLRRYK-EGWSMTSSDGDTGIF 488
+ +R+ WR GF+ SFS+ L++R G+ + + +
Sbjct: 905 HH---NQRDKLPPWRNMFLQSGFSPFSFSNFTEAQAECLVQRAPVRGFQVERK--PSSLV 1069
Query: 489 LSWKDKPVVWASVWR 503
L W+ K ++ S WR
Sbjct: 1070LCWQRKELISVSTWR 1114
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.317 0.131 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,405,801
Number of Sequences: 36976
Number of extensions: 269198
Number of successful extensions: 2202
Number of sequences better than 10.0: 102
Number of HSP's better than 10.0 without gapping: 2022
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2111
length of query: 504
length of database: 9,014,727
effective HSP length: 100
effective length of query: 404
effective length of database: 5,317,127
effective search space: 2148119308
effective search space used: 2148119308
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Medicago: description of AC147000.1