BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146972.8 + phase: 0
(198 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC90628 similar to PIR|D84746|D84746 hypothetical protein At2g33... 295 6e-81
AW690594 similar to GP|23498163|emb hypothetical protein {Plasmo... 38 0.003
TC88509 similar to PIR|T01826|T01826 microfibril-associated prot... 38 0.003
BQ137953 weakly similar to GP|22136724|gb unknown protein {Arabi... 36 0.011
BQ136417 weakly similar to EGAD|146423|156 vitellogenin {Anolis ... 36 0.011
AW685995 similar to PIR|I51618|I516 nucleolar phosphoprotein - A... 35 0.015
TC79394 weakly similar to PIR|T49019|T49019 probable RNA binding... 33 0.055
BE248698 weakly similar to GP|12836661|db H6 homeo box 3~data so... 33 0.055
TC90113 similar to PIR|C86301|C86301 arginine/serine-rich protei... 33 0.055
TC77387 similar to GP|15983396|gb|AAL11566.1 At1g51440/F5D21_19 ... 33 0.072
CA859251 similar to GP|21305823|gb DNA polymerase I {Hz-1 insect... 33 0.072
CA990835 homologue to GP|21536580|gb| unknown {Arabidopsis thali... 33 0.094
BE316406 similar to PIR|F71619|F716 hypothetical protein PFB0235... 33 0.094
TC80558 similar to GP|17933427|gb|AAL48287.1 aminoimidazole ribo... 33 0.094
TC77892 similar to GP|14861486|gb|AAK73693.1 succinate dehydroge... 32 0.12
TC88827 similar to GP|22165059|gb|AAM93676.1 unknown protein {Or... 32 0.12
CA920710 similar to PIR|S64314|S643 probable membrane protein YG... 32 0.12
BI272743 homologue to GP|9279730|dbj formin-like protein {Arabid... 32 0.12
BG587084 homologue to GP|6002696|gb| histone acetyltransferase M... 32 0.16
TC87237 similar to GP|160409|gb|AAA29651.1|| mature-parasite-inf... 32 0.21
>TC90628 similar to PIR|D84746|D84746 hypothetical protein At2g33510
[imported] - Arabidopsis thaliana, partial (52%)
Length = 625
Score = 295 bits (756), Expect = 6e-81
Identities = 140/141 (99%), Positives = 141/141 (99%)
Frame = +2
Query: 58 HISNNSDATLELNSNISLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRRAAERECEESE 117
HISNNSDATLELNSNIS+PYHWEQCLDLKTGEIYYINWRNGMKAKEDPRRAAERECEESE
Sbjct: 20 HISNNSDATLELNSNISVPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRRAAERECEESE 199
Query: 118 EEEEEEEEESWYDSEESSSESSTIISKEQYDQREVIEKQNVLVVAGCKICLMYFMVPKQV 177
EEEEEEEEESWYDSEESSSESSTIISKEQYDQREVIEKQNVLVVAGCKICLMYFMVPKQV
Sbjct: 200 EEEEEEEEESWYDSEESSSESSTIISKEQYDQREVIEKQNVLVVAGCKICLMYFMVPKQV 379
Query: 178 EDCPKCSGQLLHFDRSENCSP 198
EDCPKCSGQLLHFDRSENCSP
Sbjct: 380 EDCPKCSGQLLHFDRSENCSP 442
>AW690594 similar to GP|23498163|emb hypothetical protein {Plasmodium
falciparum 3D7}, partial (10%)
Length = 633
Score = 37.7 bits (86), Expect = 0.003
Identities = 19/40 (47%), Positives = 23/40 (57%)
Frame = +3
Query: 110 ERECEESEEEEEEEEEESWYDSEESSSESSTIISKEQYDQ 149
E E +E EEEEEEEEEE +D EE E +E D+
Sbjct: 114 EDEHDEEEEEEEEEEEEDEHDDEEEEEEEEEEEEEEDDDE 233
Score = 36.2 bits (82), Expect = 0.009
Identities = 20/61 (32%), Positives = 29/61 (46%)
Frame = +3
Query: 98 GMKAKEDPRRAAERECEESEEEEEEEEEESWYDSEESSSESSTIISKEQYDQREVIEKQN 157
G +E+ E E E EEEEEEEEEE + ++ E +E+ D E E+
Sbjct: 72 GEVEEEEDEHDEEEEDEHDEEEEEEEEEEEEDEHDDEEEEEEEEEEEEEEDDDEEGEEDE 251
Query: 158 V 158
+
Sbjct: 252 I 254
Score = 33.9 bits (76), Expect = 0.042
Identities = 18/40 (45%), Positives = 21/40 (52%)
Frame = +3
Query: 102 KEDPRRAAERECEESEEEEEEEEEESWYDSEESSSESSTI 141
+E+ E + EE EEEEEEEEEE D E E I
Sbjct: 144 EEEEEEEDEHDDEEEEEEEEEEEEEEDDDEEGEEDEIDRI 263
Score = 33.5 bits (75), Expect = 0.055
Identities = 17/42 (40%), Positives = 22/42 (51%)
Frame = +3
Query: 102 KEDPRRAAERECEESEEEEEEEEEESWYDSEESSSESSTIIS 143
+E+ + +E EEEEEEEEEE D EE + IS
Sbjct: 141 EEEEEEEEDEHDDEEEEEEEEEEEEEEDDDEEGEEDEIDRIS 266
Score = 31.6 bits (70), Expect = 0.21
Identities = 19/58 (32%), Positives = 30/58 (50%), Gaps = 1/58 (1%)
Frame = +3
Query: 100 KAKEDPRRAAERECEESEEEEE-EEEEESWYDSEESSSESSTIISKEQYDQREVIEKQ 156
+ K + E E E EEE+E +EEEE +D EE E ++++D E E++
Sbjct: 33 RRKVEEHNEEEDEGEVEEEEDEHDEEEEDEHDEEEEEEEEEE--EEDEHDDEEEEEEE 200
Score = 31.2 bits (69), Expect = 0.27
Identities = 16/48 (33%), Positives = 25/48 (51%)
Frame = +3
Query: 112 ECEESEEEEEEEEEESWYDSEESSSESSTIISKEQYDQREVIEKQNVL 159
E EE EEEEEEE+E + EE E ++ + + I++ + L
Sbjct: 129 EEEEEEEEEEEEDEHDDEEEEEEEEEEEEEEDDDEEGEEDEIDRISTL 272
Score = 30.0 bits (66), Expect = 0.61
Identities = 15/40 (37%), Positives = 22/40 (54%)
Frame = +3
Query: 102 KEDPRRAAERECEESEEEEEEEEEESWYDSEESSSESSTI 141
+E+ + E EE EEEEEEEE++ E+ ST+
Sbjct: 153 EEEEDEHDDEEEEEEEEEEEEEEDDDEEGEEDEIDRISTL 272
>TC88509 similar to PIR|T01826|T01826 microfibril-associated protein homolog
T15F16.8 - Arabidopsis thaliana, partial (83%)
Length = 1306
Score = 37.7 bits (86), Expect = 0.003
Identities = 26/65 (40%), Positives = 32/65 (49%), Gaps = 15/65 (23%)
Frame = +1
Query: 102 KEDPRRAAERECEESEEEEEEEEEESWY--DSEES-------------SSESSTIISKEQ 146
+ D A +E EE EEEEEEEEEES Y DS+E SE TI +E+
Sbjct: 472 QRDQEEALPQEEEEEEEEEEEEEEESDYETDSDEEYTGVAMVKPVFVPKSERDTIAERER 651
Query: 147 YDQRE 151
+ E
Sbjct: 652 LEAEE 666
Score = 31.2 bits (69), Expect = 0.27
Identities = 23/52 (44%), Positives = 27/52 (51%)
Frame = +1
Query: 96 RNGMKAKEDPRRAAERECEESEEEEEEEEEESWYDSEESSSESSTIISKEQY 147
R +K K R E +E EEEEEEEEEE EES E+ S E+Y
Sbjct: 445 RRRIKEKLRQRDQEEALPQEEEEEEEEEEEE----EEESDYETD---SDEEY 579
>BQ137953 weakly similar to GP|22136724|gb unknown protein {Arabidopsis
thaliana}, partial (21%)
Length = 657
Score = 35.8 bits (81), Expect = 0.011
Identities = 18/53 (33%), Positives = 28/53 (51%)
Frame = +2
Query: 92 YINWRNGMKAKEDPRRAAERECEESEEEEEEEEEESWYDSEESSSESSTIISK 144
Y+ + MK +E+ + E E+ EEEE+ EEE + EES E + I +
Sbjct: 194 YLEDKRKMKLQEEEKMKPSDEAEKEEEEEQSSEEEEEEEEEESPVEDAKPIGE 352
>BQ136417 weakly similar to EGAD|146423|156 vitellogenin {Anolis pulchellus},
partial (20%)
Length = 621
Score = 35.8 bits (81), Expect = 0.011
Identities = 18/53 (33%), Positives = 28/53 (51%)
Frame = +2
Query: 92 YINWRNGMKAKEDPRRAAERECEESEEEEEEEEEESWYDSEESSSESSTIISK 144
Y+ + MK +E+ + E E+ EEEE+ EEE + EES E + I +
Sbjct: 194 YLEDKRKMKLQEEEKMKPSDEAEKEEEEEQSSEEEEEEEEEESPVEDAKPIGE 352
>AW685995 similar to PIR|I51618|I516 nucleolar phosphoprotein - African
clawed frog, partial (5%)
Length = 516
Score = 35.4 bits (80), Expect = 0.015
Identities = 19/51 (37%), Positives = 28/51 (54%)
Frame = +3
Query: 101 AKEDPRRAAERECEESEEEEEEEEEESWYDSEESSSESSTIISKEQYDQRE 151
AK++ E ESE EEEE+ + +ESSSE + S+E+ D+ E
Sbjct: 264 AKKESSSEEESSSSESESEEEEKPAKKAAAKKESSSEEESSSSEEESDEEE 416
>TC79394 weakly similar to PIR|T49019|T49019 probable RNA binding protein -
Arabidopsis thaliana, partial (74%)
Length = 1909
Score = 33.5 bits (75), Expect = 0.055
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = +2
Query: 110 ERECEESEEEEEEEEEESWYDSEESSSESSTIISKEQYDQREVIE 154
E E EE E EEE EEEE + EE ES + +++ D+++ E
Sbjct: 281 EVEYEEVEVEEEVEEEEEEEEEEEVEEESKPLDEEDEADKKKHAE 415
>BE248698 weakly similar to GP|12836661|db H6 homeo box 3~data source:MGD
source key:MGI:107160 evidence:ISS~putative {Mus
musculus}, partial (3%)
Length = 416
Score = 33.5 bits (75), Expect = 0.055
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +2
Query: 102 KEDPRRAAERECEESEEEEEEEEEESWYDSEESSSESSTIISKEQYDQREV 152
+ED + + EE ++EE EEE+E W ++EE E KE+ D+ V
Sbjct: 182 EEDEFCSCCEDAEERDDEEREEEQEEWKETEEKVVEG----LKEELDEFSV 322
Score = 26.2 bits (56), Expect = 8.8
Identities = 20/56 (35%), Positives = 27/56 (47%)
Frame = +2
Query: 118 EEEEEEEEESWYDSEESSSESSTIISKEQYDQREVIEKQNVLVVAGCKICLMYFMV 173
+EEEEEE+E E++ +EQ + +E EK VV G K L F V
Sbjct: 167 DEEEEEEDEFCSCCEDAEERDDEEREEEQEEWKETEEK----VVEGLKEELDEFSV 322
>TC90113 similar to PIR|C86301|C86301 arginine/serine-rich protein
[imported] - Arabidopsis thaliana, partial (70%)
Length = 1259
Score = 33.5 bits (75), Expect = 0.055
Identities = 28/99 (28%), Positives = 41/99 (41%), Gaps = 1/99 (1%)
Frame = -1
Query: 29 TIDVVAGEG-RGGGGGGIGISSSSSSSDENHISNNSDATLELNSNISLPYHWEQCLDLKT 87
T D GEG GGG G + D ++ +++ + L + L+L+
Sbjct: 266 TRDSRTGEGFLGGGEGLLDCGGGGRGGDRPRLAGSAELLRLGGGGLRL-----RLLELRE 102
Query: 88 GEIYYINWRNGMKAKEDPRRAAERECEESEEEEEEEEEE 126
GE +E+ + ERE E EE EEEE EE
Sbjct: 101 GE------------REEEEKDLEREREREEEREEEEREE 21
>TC77387 similar to GP|15983396|gb|AAL11566.1 At1g51440/F5D21_19
{Arabidopsis thaliana}, partial (75%)
Length = 1793
Score = 33.1 bits (74), Expect = 0.072
Identities = 16/26 (61%), Positives = 18/26 (68%)
Frame = +3
Query: 102 KEDPRRAAERECEESEEEEEEEEEES 127
+E+ E E EE EEEEEEEEEES
Sbjct: 324 EEEEEEEEEDEDEEEEEEEEEEEEES 401
Score = 32.0 bits (71), Expect = 0.16
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +3
Query: 114 EESEEEEEEEEEESWYDSEESSSESSTI 141
EE EEEEEE+E+E + EE E S +
Sbjct: 324 EEEEEEEEEDEDEEEEEEEEEEEEESPL 407
Score = 32.0 bits (71), Expect = 0.16
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = +3
Query: 110 ERECEESEEEEEEEEEESWYDSEES 134
E E EE E+E+EEEEEE + EES
Sbjct: 327 EEEEEEEEDEDEEEEEEEEEEEEES 401
Score = 30.4 bits (67), Expect = 0.47
Identities = 23/101 (22%), Positives = 40/101 (38%), Gaps = 7/101 (6%)
Frame = +3
Query: 97 NGMKAKEDPRRAAERECEESEEEEEEEEE-------ESWYDSEESSSESSTIISKEQYDQ 149
N + +E+ + + EE EEEEEEEEE E W + + + + + +
Sbjct: 312 NQLHEEEEEEEEEDEDEEEEEEEEEEEEESPLPPLSEVWREIQGENDWEGLLDPMDPILR 491
Query: 150 REVIEKQNVLVVAGCKICLMYFMVPKQVEDCPKCSGQLLHF 190
+E+I + + C F + + C C HF
Sbjct: 492 KEIIRYGEL-----AQACYDSFDFDQNSKYCGTCKYHPAHF 599
Score = 29.6 bits (65), Expect = 0.80
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +3
Query: 99 MKAKEDPRRAAERECEESEEEEEEEEEE 126
M + E E E+ EEEEEEEEEE
Sbjct: 309 MNQLHEEEEEEEEEDEDEEEEEEEEEEE 392
Score = 26.2 bits (56), Expect = 8.8
Identities = 14/32 (43%), Positives = 21/32 (64%)
Frame = -2
Query: 43 GGIGISSSSSSSDENHISNNSDATLELNSNIS 74
GG G SSSSSSS + S++S ++ +S+ S
Sbjct: 412 GGSGDSSSSSSSSSSSSSSSSSSSSSSSSSCS 317
>CA859251 similar to GP|21305823|gb DNA polymerase I {Hz-1 insect virus}
[Heliothis zea virus 1], partial (2%)
Length = 803
Score = 33.1 bits (74), Expect = 0.072
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Frame = -1
Query: 57 NHISNNSDATLELNSNISLP----YHWE-QCLDLKTGEIYYINWRNGMKAKEDPRRAAER 111
NH +++ E I L YH Q +D++ ++ ++ + ++ K D E
Sbjct: 803 NHRKVTNNSPREKQDQIQLDN*MNYHLPLQ*IDMECVDVELVDNSDKVRYKMDDDDDEEE 624
Query: 112 ECE-ESEEEEEEEEEESW--YDSEESSSES 138
E E E E E E+EEEE W Y++ +S+S S
Sbjct: 623 EDEDEDENENEDEEEEDWLNYNNLDSNSHS 534
>CA990835 homologue to GP|21536580|gb| unknown {Arabidopsis thaliana},
partial (52%)
Length = 299
Score = 32.7 bits (73), Expect = 0.094
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 159 LVVAGCKICLMYFMVPKQVEDCPKCSGQLL 188
+++ GC CLMY M+ + CPKC +L
Sbjct: 189 MLLVGCPRCLMYVMLSENDPKCPKCHSTVL 278
>BE316406 similar to PIR|F71619|F716 hypothetical protein PFB0235w - malaria
parasite (Plasmodium falciparum), partial (4%)
Length = 531
Score = 32.7 bits (73), Expect = 0.094
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = -1
Query: 107 RAAERECEESEEEEEEEEEESWYDSEESSSESSTIISK 144
R + E EE EEEEEEEEE ++ S+ ST I K
Sbjct: 216 RERKVEEEEEEEEEEEEEESEKCGMKKGESQKSTEIKK 103
>TC80558 similar to GP|17933427|gb|AAL48287.1 aminoimidazole ribonucleotide
carboxylase {Vigna unguiculata}, partial (15%)
Length = 691
Score = 32.7 bits (73), Expect = 0.094
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = -1
Query: 107 RAAERECEESEEEEEEEEEE 126
+A+E E EE EEEEEEEEEE
Sbjct: 310 KASEEEEEEEEEEEEEEEEE 251
Score = 28.9 bits (63), Expect = 1.4
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = -1
Query: 106 RRAAERECEESEEEEEEEEEESWYD 130
+ + E E EE EEEEEEEEE D
Sbjct: 310 KASEEEEEEEEEEEEEEEEERG*VD 236
Score = 28.1 bits (61), Expect = 2.3
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -1
Query: 116 SEEEEEEEEEESWYDSEE 133
SEEEEEEEEEE + EE
Sbjct: 304 SEEEEEEEEEEEEEEEEE 251
Score = 26.9 bits (58), Expect = 5.2
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -1
Query: 86 KTGEIYYINWRNGMKAKEDPRRAAERECEESEEEEEEEEEE 126
+T + W + K+ + + E EEEEEEEEEE
Sbjct: 388 ETAAFAWWGW*ECLSLKDKRLGCSM*KASEEEEEEEEEEEE 266
>TC77892 similar to GP|14861486|gb|AAK73693.1 succinate dehydrogenase
subunit 3 {Glycine max}, partial (92%)
Length = 1148
Score = 32.3 bits (72), Expect = 0.12
Identities = 16/54 (29%), Positives = 23/54 (41%)
Frame = -1
Query: 88 GEIYYINWRNGMKAKEDPRRAAERECEESEEEEEEEEEESWYDSEESSSESSTI 141
G + + W R ER EE EE EEEE++ +D + S+ I
Sbjct: 218 GRVVVVRWNCSAAGAAGERDPVERGMEEKVEEREEEEDKKSFDFVDLRSQDMVI 57
>TC88827 similar to GP|22165059|gb|AAM93676.1 unknown protein {Oryza sativa
(japonica cultivar-group)}, complete
Length = 1221
Score = 32.3 bits (72), Expect = 0.12
Identities = 19/50 (38%), Positives = 29/50 (58%)
Frame = -3
Query: 80 EQCLDLKTGEIYYINWRNGMKAKEDPRRAAERECEESEEEEEEEEEESWY 129
E DL+ E YI++ + K+ ++ + E E EEEEEEEEE+ W+
Sbjct: 175 ESLKDLRMEEATYISFC--LLPKQQQKQTFQTE--EDEEEEEEEEEQVWW 38
>CA920710 similar to PIR|S64314|S643 probable membrane protein YGR023w -
yeast (Saccharomyces cerevisiae), partial (7%)
Length = 774
Score = 32.3 bits (72), Expect = 0.12
Identities = 23/88 (26%), Positives = 37/88 (41%)
Frame = -2
Query: 50 SSSSSDENHISNNSDATLELNSNISLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRRAA 109
++ D I N D ++ + IS HW +D + W++G
Sbjct: 530 TNEKDDATIIYNKRDKRVD-RARISNEIHWFSAMDY-VESLVPTPWKSGY---------I 384
Query: 110 ERECEESEEEEEEEEEESWYDSEESSSE 137
E E E EEEEEE++E+ + +E E
Sbjct: 383 EAEAEAEEEEEEEKDEDEDENEDEDEDE 300
>BI272743 homologue to GP|9279730|dbj formin-like protein {Arabidopsis
thaliana}, partial (2%)
Length = 370
Score = 32.3 bits (72), Expect = 0.12
Identities = 17/37 (45%), Positives = 21/37 (55%)
Frame = +1
Query: 114 EESEEEEEEEEEESWYDSEESSSESSTIISKEQYDQR 150
EE EEEEEEEE S +EE + + I K + D R
Sbjct: 253 EEEHEEEEEEEESSVLSTEELNKKFEDFIRKMKEDLR 363
>BG587084 homologue to GP|6002696|gb| histone acetyltransferase MORF beta
{Homo sapiens}, partial (1%)
Length = 685
Score = 32.0 bits (71), Expect = 0.16
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = -3
Query: 86 KTGEIYYINWRNGMKAKEDPRRAAERECEESEEEEEEEEEESWYDS 131
K G + +N + + + R+ E EE EEEEEEEEEE S
Sbjct: 428 KVGSLKILNIASNLLSNTSIIRSICSEEEEEEEEEEEEEEEGTVSS 291
Score = 26.9 bits (58), Expect = 5.2
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = -3
Query: 113 CEESEEEEEEEEEESWYDSEESSSESSTII 142
C E EEEEEEEEEE EE + SS ++
Sbjct: 356 CSE-EEEEEEEEEE----EEEEGTVSSCLV 282
>TC87237 similar to GP|160409|gb|AAA29651.1|| mature-parasite-infected
erythrocyte surface antigen {Plasmodium falciparum},
partial (2%)
Length = 2007
Score = 31.6 bits (70), Expect = 0.21
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Frame = +1
Query: 112 ECEESEEEEEEEEEESWYDSEES-----SSESSTIISKEQYDQREVIEKQNVLVVAGCKI 166
E EES+E E EE+S ++EES SSE + + E+ E +++N + G KI
Sbjct: 19 ENEESKETGESSEEKSHLENEESKETGESSEEKSHLENEENKDEEKSKQENEEIKDGEKI 198
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.306 0.126 0.358
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,187,614
Number of Sequences: 36976
Number of extensions: 114822
Number of successful extensions: 3218
Number of sequences better than 10.0: 201
Number of HSP's better than 10.0 without gapping: 1413
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2550
length of query: 198
length of database: 9,014,727
effective HSP length: 91
effective length of query: 107
effective length of database: 5,649,911
effective search space: 604540477
effective search space used: 604540477
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (22.0 bits)
S2: 56 (26.2 bits)
Medicago: description of AC146972.8