TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146972.1 + phase: 0 /pseudo
         (594 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC79804 weakly similar to GP|6175165|gb|AAF04891.1| Mutator-like...    86  9e-21
AL375902 similar to GP|9759134|dbj mutator-like transposase-like...    70  3e-12
BF638163                                                               68  9e-12
CB891859 similar to GP|6175165|gb| Mutator-like transposase {Ara...    59  4e-09
BF646328 similar to PIR|F84533|F845 Mutator-like transposase [im...    46  5e-05
AW687028 weakly similar to GP|9909176|dbj| hypothetical protein~...    36  0.036
TC93796 similar to PIR|H71402|H71402 probable kinesin - Arabidop...    32  0.90
AL388364 similar to GP|5306274|gb|A expressed protein {Arabidops...    32  0.90
TC87488                                                                30  3.4
TC86301 similar to GP|8809622|dbj|BAA97173.1 Myb-related transcr...    29  5.8
TC89473 similar to GP|9759049|dbj|BAB09571.1 gene_id:MVA3.7~pir|...    28  7.6
TC89641 similar to GP|9988432|dbj|BAB12698.1 hypothetical protei...    28  7.6
TC85143 similar to PIR|T11852|T11852 lipoxygenase (EC 1.13.11.12...    28  7.6
TC85485 similar to GP|22136900|gb|AAM91794.1 putative transketol...    28  7.6
TC85706 similar to GP|21700895|gb|AAM70571.1 At1g60730/F8A5_24 {...    28  9.9
BQ146188 similar to PIR|H96632|H966 hypothetical protein F8A5.26...    28  9.9

>TC79804 weakly similar to GP|6175165|gb|AAF04891.1| Mutator-like transposase
            {Arabidopsis thaliana}, partial (57%)
          Length = 2129

 Score = 85.9 bits (211), Expect(2) = 9e-21
 Identities = 58/242 (23%), Positives = 110/242 (44%)
 Frame = +1

Query: 278  QGLIPAMQEVMPGVPHRYCVMHL*KNCTKQWKNKELRRVV*ECARETTPTQFNRIMERVK 337
            +G++ A++   P   H +C+ HL +N  K++KN  L  ++   A  TT   F   M  ++
Sbjct: 976  KGIVDAIRRKFPRSSHAFCMRHLSENIGKEFKNSRLIHLLWSAAYATTINAFREKMAEIE 1155

Query: 338  SINQKAWEYLNKWPKEAWIKAYFNENCKAYNIVNNACEVFNSKILNYRGHPILTMAEEIR 397
             ++  A  +L  +    W   YF      Y  +++  E FN  IL  +  PI+ + E I+
Sbjct: 1156 EVSPNASMWLQHFHPSQWALVYFEGT--RYGHLSSNIEEFNKWILEAQELPIIQVIERIQ 1329

Query: 398  CYVMRKMSQNKMKLDGRAGPLCPWQQSRLEKEKIASHNWTPLWNGDNARQRYHIENNCRI 457
              +  +    ++K       L P  + R+ +    +  +  L + +     + + +  R 
Sbjct: 1330 SKLKTEFDDRRLKSSSWCSVLTPSSERRMVEAINRASTYQVLKSDE---VEFEVISADRS 1500

Query: 458  KVDVDIFKQTCTCRFWQLT*MPCMHACSALALRGFKLEDHCHAWLTLGSYRETYSYFIQP 517
             + V+I   +C+CR WQL  +PC HA +AL      +  +     T+ SYR+T    + P
Sbjct: 1501 DI-VNIGSHSCSCRDWQLYGIPCSHAVAALISSRKDVYAYTAKCFTVASYRDTVCRGVTP 1677

Query: 518  MN 519
            ++
Sbjct: 1678 LS 1683



 Score = 32.7 bits (73), Expect(2) = 9e-21
 Identities = 16/57 (28%), Positives = 25/57 (43%)
 Frame = +3

Query: 534  PPKVKRSAGRPKKNRRKDGNEEPIGGSSMKKTYNDIQCGRCGLMGHNSRSCAKQGVA 590
            PPK +R  GRP+K R        I      +  + + C RC   GH   +C  + ++
Sbjct: 1746 PPKFRRPPGRPEKKR--------ICVEDHNRDKHTVHCSRCNQTGHYKTTCKAEMIS 1892


>AL375902 similar to GP|9759134|dbj mutator-like transposase-like protein
           {Arabidopsis thaliana}, partial (20%)
          Length = 542

 Score = 69.7 bits (169), Expect = 3e-12
 Identities = 41/128 (32%), Positives = 54/128 (42%), Gaps = 11/128 (8%)
 Frame = +2

Query: 468 CTCRFWQLT*MPCMHACSALALRGFKLEDHCHAWLTLGSYRETYSYFIQPMNSHIYWEPT 527
           C+CR WQL   PC HA +AL   G           T+ SYR  YS  I P+     W   
Sbjct: 14  CSCRRWQLYGYPCAHAAAALISCGHNAHMFAEPCFTVQSYRMAYSQMIYPIPDKSQWREH 193

Query: 528 PYEKP-----------VPPKVKRSAGRPKKNRRKDGNEEPIGGSSMKKTYNDIQCGRCGL 576
                            PPK++R  GRPKK   +  N         K+    +QCGRC +
Sbjct: 194 GEGAEGGGGARVDIVIHPPKIRRPPGRPKKKVLRVEN--------FKRPKRVVQCGRCHM 349

Query: 577 MGHNSRSC 584
           +GH+ + C
Sbjct: 350 LGHSQKKC 373


>BF638163 
          Length = 687

 Score = 68.2 bits (165), Expect = 9e-12
 Identities = 30/33 (90%), Positives = 31/33 (93%)
 Frame = +2

Query: 562 MKKTYNDIQCGRCGLMGHNSRSCAKQGVARRPK 594
           MKKTYND QCGRCGLMGH+SRSCAK GVARRPK
Sbjct: 380 MKKTYNDTQCGRCGLMGHSSRSCAK*GVARRPK 478


>CB891859 similar to GP|6175165|gb| Mutator-like transposase {Arabidopsis
           thaliana}, partial (27%)
          Length = 625

 Score = 59.3 bits (142), Expect = 4e-09
 Identities = 37/131 (28%), Positives = 64/131 (48%)
 Frame = +1

Query: 278 QGLIPAMQEVMPGVPHRYCVMHL*KNCTKQWKNKELRRVV*ECARETTPTQFNRIMERVK 337
           QG++  ++   P   H +C+ HL  +  K++ N  L  ++ E A   T  +F   +  ++
Sbjct: 58  QGIVDGVEANFPTAFHGFCMRHLSDSFRKEFNNTMLVNLLWEAANCLTIIEFEGKVMEIE 237

Query: 338 SINQKAWEYLNKWPKEAWIKAYFNENCKAYNIVNNACEVFNSKILNYRGHPILTMAEEIR 397
            I+Q A  ++ + P   W  AYF E  +  ++  N  E  NS IL   G PI+ M E IR
Sbjct: 238 EISQDAAYWIRRVPPRLWATAYF-EGHRFGHLTANIVEALNSWILEASGLPIIQMMECIR 414

Query: 398 CYVMRKMSQNK 408
             +M   ++ +
Sbjct: 415 RQLMTWFNERR 447


>BF646328 similar to PIR|F84533|F845 Mutator-like transposase [imported] -
           Arabidopsis thaliana, partial (3%)
          Length = 636

 Score = 45.8 bits (107), Expect = 5e-05
 Identities = 22/70 (31%), Positives = 35/70 (49%)
 Frame = -1

Query: 427 EKEKIASHNWTPLWNGDNARQRYHIENNCRIKVDVDIFKQTCTCRFWQLT*MPCMHACSA 486
           EK+K +   W   W+GD     +++ N    K  V++ ++TC CR W LT +PC H    
Sbjct: 501 EKQK-SCRGWKATWHGDMEMNNFNVSNETN-KYIVNLAQRTCACRKWNLTGIPCAHVIPC 328

Query: 487 LALRGFKLED 496
           +   G   E+
Sbjct: 327 IWHNGLADEN 298



 Score = 37.4 bits (85), Expect = 0.016
 Identities = 20/52 (38%), Positives = 27/52 (51%)
 Frame = -3

Query: 510 TYSYFIQPMNSHIYWEPTPYEKPVPPKVKRSAGRPKKNRRKDGNEEPIGGSS 561
           TYS+ + P +    W  T  E   P   +RSAGRPKK R+K  +E    G +
Sbjct: 172 TYSHIVLPSSGPKLWPVTNTEHINPLAKRRSAGRPKKLRKKANDETVRSGDA 17


>AW687028 weakly similar to GP|9909176|dbj| hypothetical protein~similar to
           Arabidopsis thaliana F20D10.300, partial (11%)
          Length = 662

 Score = 36.2 bits (82), Expect = 0.036
 Identities = 26/106 (24%), Positives = 37/106 (34%), Gaps = 4/106 (3%)
 Frame = +1

Query: 283 AMQEVMPGVPHRYCVMHL*KNCTKQWKNKELRRVV*ECARET-TPTQFNRIMERVKSINQ 341
           A+++V P   HR C  HL KN  +  K         +      TP QF      +   N+
Sbjct: 226 AIKQVFPDASHRLCAWHLHKNAQENIKKTPFLEGFRKAMYSNFTPEQFEDFWSELIQKNE 405

Query: 342 ---KAWEYLNKWPKEAWIKAYFNENCKAYNIVNNACEVFNSKILNY 384
               AW       K  W  AY  +         + CE  N+ +  Y
Sbjct: 406 LEGNAWVIKTYANKSLWATAYLRDKFFGRIRTTSQCEAINAIVKTY 543


>TC93796 similar to PIR|H71402|H71402 probable kinesin - Arabidopsis
           thaliana, partial (5%)
          Length = 744

 Score = 31.6 bits (70), Expect = 0.90
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +2

Query: 468 CTCRFWQLT*MPCMHACSALALRGF 492
           C CR+W++  + C+H C     +GF
Sbjct: 647 CHCRYWRVVGINCLHVCGNFGYQGF 721


>AL388364 similar to GP|5306274|gb|A expressed protein {Arabidopsis
           thaliana}, partial (4%)
          Length = 524

 Score = 31.6 bits (70), Expect = 0.90
 Identities = 21/62 (33%), Positives = 29/62 (45%), Gaps = 6/62 (9%)
 Frame = -2

Query: 325 TPTQFNRIMERVKSINQKAWEYLNKWPKE---AWIKAYFNENCKAYN---IVNNACEVFN 378
           T  +F RI + +   N     YLNKWP++    +I   F  N KAY    I +  C + N
Sbjct: 307 TAAKFRRIKQLLLIHNALGL*YLNKWPQDVQSVYISVVFTLNDKAYRYLLITSFCCTLQN 128

Query: 379 SK 380
            K
Sbjct: 127 CK 122


>TC87488 
          Length = 1591

 Score = 29.6 bits (65), Expect = 3.4
 Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
 Frame = +3

Query: 421 WQQSRLEKEKIASHN--WTPLWNGDNARQRYHIENNCRIKVDVD 462
           W++    K+ I  +N  W P++NG+N    Y I N+  I +DVD
Sbjct: 699 WKEIATRKQVILKYNFLWKPVYNGEN--HIYWITNDGVIVMDVD 824


>TC86301 similar to GP|8809622|dbj|BAA97173.1 Myb-related transcription
           activator-like {Arabidopsis thaliana}, partial (56%)
          Length = 1396

 Score = 28.9 bits (63), Expect = 5.8
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +2

Query: 570 QCGRCGLMGHNSRSCAKQGV 589
           +C  C   GHNSR+C  +GV
Sbjct: 194 RCSHCSHNGHNSRTCPNRGV 253


>TC89473 similar to GP|9759049|dbj|BAB09571.1
           gene_id:MVA3.7~pir||T13462~similar to unknown protein
           {Arabidopsis thaliana}, partial (5%)
          Length = 715

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
 Frame = +2

Query: 361 NENCKAYNIVNNACEVFNSKILNYRGHPILTMAEEIRCYVMRKMSQNKMKLDGRAGPLC- 419
           + +C     +NN   VFNS I+ Y    I  + + + C + R + +   ++DG A   C 
Sbjct: 119 SSSCSPKKWINNCIRVFNS-IICYIVFLIFDLLDAVLCVIYRYLDE---RIDGVASSCCC 286

Query: 420 -PWQQSR 425
             W++ +
Sbjct: 287 SKWERQK 307


>TC89641 similar to GP|9988432|dbj|BAB12698.1 hypothetical protein {Oryza
           sativa (japonica cultivar-group)}, partial (44%)
          Length = 1080

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +3

Query: 570 QCGRCGLMGHNSRSC 584
           +C  CG +GHNSR+C
Sbjct: 93  KCSHCGNIGHNSRTC 137


>TC85143 similar to PIR|T11852|T11852 lipoxygenase (EC 1.13.11.12) - kidney
            bean, partial (93%)
          Length = 3009

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 17/72 (23%), Positives = 31/72 (42%), Gaps = 2/72 (2%)
 Frame = +3

Query: 398  CYVMRKMSQNKMKLDGRAGPLCPWQQSRLEKEKIAS--HNWTPLWNGDNARQRYHIENNC 455
            C  M     + +    +A   C W+ +    ++     H WT    G++ R+  H     
Sbjct: 1155 CKSMCDSKTSSVSTRKQARSQCLWRSN*YNNKRTLGD*HGWTHSRKGNSRREAIHFGLP* 1334

Query: 456  RIKVDVDIFKQT 467
            RI V ++++KQT
Sbjct: 1335 RIHVILEVYKQT 1370


>TC85485 similar to GP|22136900|gb|AAM91794.1 putative transketolase
            {Arabidopsis thaliana}, partial (90%)
          Length = 2728

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 9/27 (33%), Positives = 18/27 (66%)
 Frame = -1

Query: 193  IWRTRTTRSGFWNYSMQILEIMCVMDG 219
            +WRT++  SG+ N S  + + +C ++G
Sbjct: 1168 VWRTKSNGSGYLNQSRFVCDSLCFLNG 1088


>TC85706 similar to GP|21700895|gb|AAM70571.1 At1g60730/F8A5_24 {Arabidopsis
            thaliana}, partial (96%)
          Length = 1416

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 9/17 (52%), Positives = 14/17 (81%)
 Frame = +1

Query: 227  RYEFPFKWMELYYLLIY 243
            +YEFPF+W+ LY  ++Y
Sbjct: 1174 QYEFPFEWIWLYKTMLY 1224


>BQ146188 similar to PIR|H96632|H966 hypothetical protein F8A5.26 [imported]
           - Arabidopsis thaliana, partial (12%)
          Length = 397

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 9/17 (52%), Positives = 14/17 (81%)
 Frame = +2

Query: 227 RYEFPFKWMELYYLLIY 243
           +YEFPF+W+ LY  ++Y
Sbjct: 251 QYEFPFEWIWLYKTMLY 301


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.350    0.154    0.574 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,383,336
Number of Sequences: 36976
Number of extensions: 380463
Number of successful extensions: 4032
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 2212
Number of HSP's successfully gapped in prelim test: 227
Number of HSP's that attempted gapping in prelim test: 1719
Number of HSP's gapped (non-prelim): 2595
length of query: 594
length of database: 9,014,727
effective HSP length: 102
effective length of query: 492
effective length of database: 5,243,175
effective search space: 2579642100
effective search space used: 2579642100
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 14 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 38 (21.9 bits)
S2: 61 (28.1 bits)