Medicago
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146941.10 - phase: 0 
         (124 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC77904 homologue to GP|21617984|gb|AAM67034.1 unknown {Arabidop...   249  1e-67
TC77903 homologue to GP|21617984|gb|AAM67034.1 unknown {Arabidop...   249  1e-67
AL387690 homologue to GP|21617984|gb unknown {Arabidopsis thalia...   209  2e-55
TC83666 similar to GP|15042832|gb|AAK82455.1 putative RNA bindin...    52  5e-08
TC84230                                                                51  1e-07
TC81507 similar to GP|22831146|dbj|BAC16007. putative pre-mRNA s...    51  1e-07
TC78841 similar to GP|5815235|gb|AAD52609.1| splicing factor SR1...    49  4e-07
TC76790 similar to PIR|T06817|T06817 RNA-binding protein - garde...    49  7e-07
TC77694 homologue to PIR|T09704|T09704 probable arginine/serine-...    47  2e-06
TC85011                                                                47  2e-06
TC76331 similar to GP|7673355|gb|AAF66823.1| poly(A)-binding pro...    47  2e-06
TC84024 similar to PIR|S77714|S77714 RNA-binding protein precurs...    46  3e-06
TC77695 similar to PIR|T09704|T09704 probable arginine/serine-ri...    46  4e-06
TC76789 similar to GP|15294254|gb|AAK95304.1 AT4g24770/F22K18_30...    45  6e-06
TC87205 similar to GP|12324445|gb|AAG52185.1 putative splicing f...    44  2e-05
TC76341 similar to GP|7528270|gb|AAF63202.1| poly(A)-binding pro...    43  3e-05
TC89660 similar to GP|11034579|dbj|BAB17103. hypothetical protei...    43  3e-05
TC92312 weakly similar to GP|4567275|gb|AAD23688.1| expressed pr...    43  4e-05
TC91399 weakly similar to PIR|S53494|S53494 RNA-binding protein ...    42  5e-05
TC88887 weakly similar to GP|6523547|emb|CAB62280.1 hydroxyproli...    42  5e-05

>TC77904 homologue to GP|21617984|gb|AAM67034.1 unknown {Arabidopsis
           thaliana}, complete
          Length = 695

 Score =  249 bits (637), Expect = 1e-67
 Identities = 124/124 (100%), Positives = 124/124 (100%)
 Frame = +3

Query: 1   MTTISLRKGNTRLPPEVNRVLYVRNLPFNITSEEMYDIFGKYGAIRQIRIGTNKDTRGTA 60
           MTTISLRKGNTRLPPEVNRVLYVRNLPFNITSEEMYDIFGKYGAIRQIRIGTNKDTRGTA
Sbjct: 57  MTTISLRKGNTRLPPEVNRVLYVRNLPFNITSEEMYDIFGKYGAIRQIRIGTNKDTRGTA 236

Query: 61  FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQAKMSKKFDQKKKEDEIARMQEKYGVS 120
           FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQAKMSKKFDQKKKEDEIARMQEKYGVS
Sbjct: 237 FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQAKMSKKFDQKKKEDEIARMQEKYGVS 416

Query: 121 TKDK 124
           TKDK
Sbjct: 417 TKDK 428


>TC77903 homologue to GP|21617984|gb|AAM67034.1 unknown {Arabidopsis
           thaliana}, complete
          Length = 802

 Score =  249 bits (637), Expect = 1e-67
 Identities = 124/124 (100%), Positives = 124/124 (100%)
 Frame = +2

Query: 1   MTTISLRKGNTRLPPEVNRVLYVRNLPFNITSEEMYDIFGKYGAIRQIRIGTNKDTRGTA 60
           MTTISLRKGNTRLPPEVNRVLYVRNLPFNITSEEMYDIFGKYGAIRQIRIGTNKDTRGTA
Sbjct: 56  MTTISLRKGNTRLPPEVNRVLYVRNLPFNITSEEMYDIFGKYGAIRQIRIGTNKDTRGTA 235

Query: 61  FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQAKMSKKFDQKKKEDEIARMQEKYGVS 120
           FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQAKMSKKFDQKKKEDEIARMQEKYGVS
Sbjct: 236 FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQAKMSKKFDQKKKEDEIARMQEKYGVS 415

Query: 121 TKDK 124
           TKDK
Sbjct: 416 TKDK 427


>AL387690 homologue to GP|21617984|gb unknown {Arabidopsis thaliana}, partial
           (86%)
          Length = 389

 Score =  209 bits (533), Expect = 2e-55
 Identities = 107/116 (92%), Positives = 107/116 (92%), Gaps = 3/116 (2%)
 Frame = +2

Query: 12  RLPPEVNRVLYVRNLPFNITSEEMYDIFGKYGAIRQIRIGTNKDTRGTAFVVYEDIYDAK 71
           RLPPEVNRVLYVRNLPFNITSEEMYDIFGKYGAIRQIRIGTNKDTRGTAFVVYEDIYDAK
Sbjct: 2   RLPPEVNRVLYVRNLPFNITSEEMYDIFGKYGAIRQIRIGTNKDTRGTAFVVYEDIYDAK 181

Query: 72  TAVDHLSGFN---VANRYLIVLYYQQAKMSKKFDQKKKEDEIARMQEKYGVSTKDK 124
           TAVDHLS         RYLIVLYYQQAKMSKKFDQKKKEDEIARMQEKYGVSTKDK
Sbjct: 182 TAVDHLSXVQSGXXLTRYLIVLYYQQAKMSKKFDQKKKEDEIARMQEKYGVSTKDK 349


>TC83666 similar to GP|15042832|gb|AAK82455.1 putative RNA binding protein
           {Oryza sativa}, partial (52%)
          Length = 896

 Score = 52.4 bits (124), Expect = 5e-08
 Identities = 31/102 (30%), Positives = 55/102 (53%), Gaps = 3/102 (2%)
 Frame = +1

Query: 21  LYVRNLPFNITSEEMYDIFGKYGAIRQIRIGTNKDT---RGTAFVVYEDIYDAKTAVDHL 77
           ++V  +PF+ T  ++  +F +YG +  I +  +K T   +G AF+ YED      AVD+L
Sbjct: 274 VFVGGIPFDFTEGDVIAVFAQYGEVVDINLVRDKGTGKSKGFAFIAYEDQRSTNLAVDNL 453

Query: 78  SGFNVANRYLIVLYYQQAKMSKKFDQKKKEDEIARMQEKYGV 119
           +G  V+ R + V +  + K  ++ D    E+E  + +E  GV
Sbjct: 454 NGAQVSGRIIRVDHVDKYKKMEEED----EEEAKQKREARGV 567


>TC84230 
          Length = 691

 Score = 51.2 bits (121), Expect = 1e-07
 Identities = 29/80 (36%), Positives = 45/80 (56%)
 Frame = +2

Query: 21  LYVRNLPFNITSEEMYDIFGKYGAIRQIRIGTNKDTRGTAFVVYEDIYDAKTAVDHLSGF 80
           LYV NL  ++T  ++ D+F +YGA+  +   T+   R  AFV ++ I DAK A + L GF
Sbjct: 224 LYVANLSPDVTDSDLMDLFVQYGALDSV---TSYSARNYAFVFFKRIDDAKAAKNALQGF 394

Query: 81  NVANRYLIVLYYQQAKMSKK 100
           N     L + + + AK  K+
Sbjct: 395 NFRGNSLRIEFARPAKTCKQ 454


>TC81507 similar to GP|22831146|dbj|BAC16007. putative pre-mRNA splicing
           factor SF2 (SR1 protein) {Oryza sativa (japonica
           cultivar-group)}, partial (57%)
          Length = 1287

 Score = 50.8 bits (120), Expect = 1e-07
 Identities = 27/76 (35%), Positives = 41/76 (53%)
 Frame = +2

Query: 6   LRKGNTRLPPEVNRVLYVRNLPFNITSEEMYDIFGKYGAIRQIRIGTNKDTRGTAFVVYE 65
           L+    R+    +R +YV NLP +I   E+ D+F KYG I  I +       G AFV +E
Sbjct: 71  LKSKKRRMSRHSSRTVYVGNLPGDIREREVEDLFMKYGHITHIDLKVPPRPPGYAFVEFE 250

Query: 66  DIYDAKTAVDHLSGFN 81
           D+ DA+ A+    G++
Sbjct: 251 DVQDAEDAIRGRDGYD 298


>TC78841 similar to GP|5815235|gb|AAD52609.1| splicing factor SR1
           {Arabidopsis thaliana}, partial (74%)
          Length = 1380

 Score = 49.3 bits (116), Expect = 4e-07
 Identities = 28/72 (38%), Positives = 40/72 (54%)
 Frame = +3

Query: 18  NRVLYVRNLPFNITSEEMYDIFGKYGAIRQIRIGTNKDTRGTAFVVYEDIYDAKTAVDHL 77
           +R LYV NLP +I   E+ D+F KYG I  I +       G AFV +ED  DA+ A+ + 
Sbjct: 57  SRTLYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAIYYR 236

Query: 78  SGFNVANRYLIV 89
            G++     L+V
Sbjct: 237 DGYDFDGYRLLV 272


>TC76790 similar to PIR|T06817|T06817 RNA-binding protein - garden pea,
           partial (79%)
          Length = 1141

 Score = 48.5 bits (114), Expect = 7e-07
 Identities = 26/79 (32%), Positives = 46/79 (57%), Gaps = 3/79 (3%)
 Frame = +1

Query: 14  PPEVNRVLYVRNLPFNITSEEMYDIFGKYGAIRQIRIGTNKDT---RGTAFVVYEDIYDA 70
           PPE +  L+V N PF++ SE++  +FG+ G +    +  N+ T   RG  FV    + +A
Sbjct: 349 PPE-DAKLFVGNFPFDVDSEKLAMLFGQAGTVEIAEVIYNRQTDLSRGFGFVTMSTVEEA 525

Query: 71  KTAVDHLSGFNVANRYLIV 89
           ++AV+  +G++   R L+V
Sbjct: 526 ESAVEKFNGYDYNGRSLVV 582


>TC77694 homologue to PIR|T09704|T09704 probable arginine/serine-rich
           splicing factor - alfalfa, partial (95%)
          Length = 1494

 Score = 47.0 bits (110), Expect = 2e-06
 Identities = 29/83 (34%), Positives = 46/83 (54%), Gaps = 5/83 (6%)
 Frame = +3

Query: 14  PPEVNRV--LYVRNLPFNITSEEMYDIFGKYGAIRQIRIGTNKDT---RGTAFVVYEDIY 68
           PP+++    L V N+ F  T+++++ +F KYG +  I I  ++ T   RG AFV Y+   
Sbjct: 63  PPDISDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFAFVRYKYAD 242

Query: 69  DAKTAVDHLSGFNVANRYLIVLY 91
           +A  AVD L G  V  R + V +
Sbjct: 243 EASKAVDRLDGRMVDGREITVQF 311


>TC85011 
          Length = 498

 Score = 47.0 bits (110), Expect = 2e-06
 Identities = 25/61 (40%), Positives = 37/61 (59%)
 Frame = +2

Query: 21  LYVRNLPFNITSEEMYDIFGKYGAIRQIRIGTNKDTRGTAFVVYEDIYDAKTAVDHLSGF 80
           LYV NL  ++T  ++ D+F +YGA+  +   T+   R  AFV ++ I DAK A + L GF
Sbjct: 161 LYVANLSPDVTDSDLMDLFVQYGALDSV---TSYSARNYAFVFFKRIDDAKAAKNALQGF 331

Query: 81  N 81
           N
Sbjct: 332 N 334


>TC76331 similar to GP|7673355|gb|AAF66823.1| poly(A)-binding protein
           {Nicotiana tabacum}, partial (97%)
          Length = 2581

 Score = 46.6 bits (109), Expect = 2e-06
 Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
 Frame = +3

Query: 17  VNRVLYVRNLPFNITSEEMYDIFGKYGAIRQIRIGTNKDTR---GTAFVVYEDIYDAKTA 73
           V   LYV +L  N+T  ++YD+F + G +  +R+  +  TR   G  +V Y +  DA  A
Sbjct: 438 VTTSLYVGDLDMNVTDSQLYDLFNQLGQVVSVRVCRDLTTRRSLGYGYVNYSNPQDAARA 617

Query: 74  VDHLSGFNVANRYLIVLYYQQAKMSKKFDQ 103
           +D L+   + NR + ++Y  +    +K  Q
Sbjct: 618 LDVLNFTPLNNRPIRIMYSHRDPSIRKSGQ 707



 Score = 46.2 bits (108), Expect = 3e-06
 Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
 Frame = +3

Query: 21   LYVRNLPFNITSEEMYDIFGKYGAIRQIRI--GTNKDTRGTAFVVYEDIYDAKTAVDHLS 78
            LYV+NL  +I  E++ ++F  YG I   ++    N  +RG+ FV +    +A  A+  ++
Sbjct: 1296 LYVKNLDDSIADEKLKELFSSYGTITSCKVMRDPNGVSRGSGFVAFSTPEEASRALLEMN 1475

Query: 79   GFNVANRYLIVLYYQQAKMSKKFDQKKKEDEIARMQEKY 117
            G  VA++ L V   Q           +KED  AR+Q ++
Sbjct: 1476 GKMVASKPLYVTLAQ-----------RKEDRRARLQAQF 1559


>TC84024 similar to PIR|S77714|S77714 RNA-binding protein precursor  33K -
           wood tobacco, partial (55%)
          Length = 867

 Score = 46.2 bits (108), Expect = 3e-06
 Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
 Frame = +3

Query: 21  LYVRNLPFNITSEEMYDIFGKYGAIRQIRIGTNKDT---RGTAFVVYEDIYDAKTAVDHL 77
           LYV NLPF++TS ++ DIF + G +  + I  ++ T   RG AFV  +   +AK A+   
Sbjct: 339 LYVGNLPFSMTSSQLADIFAEAGTVVSVEIVYDRLTDRSRGFAFVTMKSAEEAKEAIRMF 518

Query: 78  SGFNVANR 85
            G  V  R
Sbjct: 519 DGSQVGGR 542


>TC77695 similar to PIR|T09704|T09704 probable arginine/serine-rich splicing
           factor - alfalfa, partial (83%)
          Length = 1657

 Score = 45.8 bits (107), Expect = 4e-06
 Identities = 29/83 (34%), Positives = 45/83 (53%), Gaps = 5/83 (6%)
 Frame = +1

Query: 14  PPEVNRV--LYVRNLPFNITSEEMYDIFGKYGAIRQIRIGTNKDT---RGTAFVVYEDIY 68
           PP++     L V N+ F  T+++++ +F KYG +  I I  ++ T   RG AFV Y+   
Sbjct: 91  PPDIADTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGESRGFAFVRYKYAD 270

Query: 69  DAKTAVDHLSGFNVANRYLIVLY 91
           +A  AVD L G  V  R + V +
Sbjct: 271 EASKAVDRLDGRMVDGREITVQF 339


>TC76789 similar to GP|15294254|gb|AAK95304.1 AT4g24770/F22K18_30
           {Arabidopsis thaliana}, partial (62%)
          Length = 1294

 Score = 45.4 bits (106), Expect = 6e-06
 Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
 Frame = +3

Query: 15  PEVNRVLYVRNLPFNITSEEMYDIFGKYGAIRQIRIGTNKDT---RGTAFVVYEDIYDAK 71
           P  +  ++V NLPF++ SE++  +F + G +    +  N+DT   RG  FV      + +
Sbjct: 441 PSEDLKIFVGNLPFDVDSEKLAQLFEQSGTVEIAEVIYNRDTDRSRGFGFVTMSTSEEVE 620

Query: 72  TAVDHLSGFNVANRYLIV 89
            AV+  SGF +  R L V
Sbjct: 621 RAVNKFSGFELDGRLLTV 674


>TC87205 similar to GP|12324445|gb|AAG52185.1 putative splicing factor;
           53460-55514 {Arabidopsis thaliana}, partial (81%)
          Length = 1197

 Score = 43.5 bits (101), Expect = 2e-05
 Identities = 22/64 (34%), Positives = 35/64 (54%)
 Frame = +2

Query: 18  NRVLYVRNLPFNITSEEMYDIFGKYGAIRQIRIGTNKDTRGTAFVVYEDIYDAKTAVDHL 77
           +R +YV NLP +I   E+ D+F KYG I +I +          FV +++  DA+ A+   
Sbjct: 116 SRTIYVGNLPADIRESEIEDLFYKYGRIMEIELKVPPRPPCYCFVEFDNARDAEDAIRGR 295

Query: 78  SGFN 81
            G+N
Sbjct: 296 DGYN 307


>TC76341 similar to GP|7528270|gb|AAF63202.1| poly(A)-binding protein
           {Cucumis sativus}, partial (90%)
          Length = 2501

 Score = 43.1 bits (100), Expect = 3e-05
 Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
 Frame = +3

Query: 17  VNRVLYVRNLPFNITSEEMYDIFGKYGAIRQIRIGTNKDTR---GTAFVVYEDIYDAKTA 73
           V   LYV +L  N+   ++YD+F + G +  +R+  +  TR   G  +V + +  DA  A
Sbjct: 288 VTTSLYVGDLEVNVNDSQLYDLFNQVGQVVSVRVCRDLATRRSLGYGYVNFTNPQDAARA 467

Query: 74  VDHLSGFNVANRYLIVLYYQQAKMSKK 100
           +D L+   + N+ + V+Y  +   S+K
Sbjct: 468 LDVLNFTPMNNKSIRVMYSHRDPSSRK 548



 Score = 41.6 bits (96), Expect = 8e-05
 Identities = 29/101 (28%), Positives = 51/101 (49%), Gaps = 7/101 (6%)
 Frame = +3

Query: 21  LYVRNLPFNITSEEMYDIFGKYGAIRQIRIGTNKDTRGT--AFVVYEDIYDAKTAVDHLS 78
           +YV+NL  + T +++ + FG YG I    +  + D R     FV +E+  DA  AV+ L+
Sbjct: 837 VYVKNLSESFTEDDLKNEFGAYGTITSAVLMRDADGRSKCFGFVNFENAEDAAKAVEALN 1016

Query: 79  GFNVANRYLIVLYYQ-----QAKMSKKFDQKKKEDEIARMQ 114
           G  V ++   V   Q     + ++  +F+Q  KE  + + Q
Sbjct: 1017GKKVDDKEWYVGKAQKKSEREQELKGRFEQTVKESVVDKFQ 1139


>TC89660 similar to GP|11034579|dbj|BAB17103. hypothetical protein~similar
          to Arabidopsis thaliana chromosome 3  K15M2.15, partial
          (16%)
          Length = 1035

 Score = 43.1 bits (100), Expect = 3e-05
 Identities = 23/60 (38%), Positives = 36/60 (59%), Gaps = 3/60 (5%)
 Frame = +3

Query: 18 NRVLYVRNLPFNITSEEMYDIFGKYGAIRQIRIGTNK---DTRGTAFVVYEDIYDAKTAV 74
          +R ++V N+PF +++E +   F KYG I +  +G +K    TRG AF VY+    AK +V
Sbjct: 24 SRKVFVGNVPFEVSAESLLSEFSKYGEIEEGPLGFDKASGKTRGFAFFVYKTEEGAKNSV 203


>TC92312 weakly similar to GP|4567275|gb|AAD23688.1| expressed protein
           {Arabidopsis thaliana}, partial (29%)
          Length = 1319

 Score = 42.7 bits (99), Expect = 4e-05
 Identities = 31/108 (28%), Positives = 51/108 (46%), Gaps = 5/108 (4%)
 Frame = +1

Query: 21  LYVRNLPFNITSEEMYDIFGKYGAIRQIRIGTNKDT---RGTAFVVYEDIYDAKTAVDHL 77
           L VRNLPF     E+ D F   G + ++ I    DT   +G AFV +    DA+ A+  L
Sbjct: 280 LIVRNLPFKAKENEIRDAFSSAGTVWEVFIPQKSDTGLSKGFAFVKFTCKQDAENAIRKL 459

Query: 78  SGFNVANRYLIVLYYQQAKM--SKKFDQKKKEDEIARMQEKYGVSTKD 123
           +G    +R + V +    K+  S   D    E+   ++ ++ G +T +
Sbjct: 460 NGSKFGSRLIAVDWAVPKKIFSSDTNDAPASEEGQQKVTDEDGSTTTE 603


>TC91399 weakly similar to PIR|S53494|S53494 RNA-binding protein cp33
           precursor - Arabidopsis thaliana, partial (39%)
          Length = 775

 Score = 42.4 bits (98), Expect = 5e-05
 Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
 Frame = +2

Query: 18  NRVLYVRNLPFNITSEEMYDIFGKYGAIRQIRI---GTNKDTRGTAFVVYEDIYDAKTAV 74
           +R L V NLPF+++S ++  +FG+ G +  + I        +RG AFV   ++ DA+ A+
Sbjct: 245 SRRLLVGNLPFSLSSSQLAQLFGEAGNVVSVEILYDDITNRSRGFAFVTMGNVEDAEEAI 424

Query: 75  DHLSGFNVANRYLIVLYYQQAKMSKK 100
               G  V  R + V + +   + K+
Sbjct: 425 RMFDGTTVGGRAIKVNFPEVPIVGKR 502


>TC88887 weakly similar to GP|6523547|emb|CAB62280.1 hydroxyproline-rich
           glycoprotein DZ-HRGP {Volvox carteri f. nagariensis},
           partial (18%)
          Length = 1681

 Score = 42.4 bits (98), Expect = 5e-05
 Identities = 22/74 (29%), Positives = 40/74 (53%), Gaps = 2/74 (2%)
 Frame = -1

Query: 16  EVNRVLYVRNLPFNITSEEMYDIFGKYGAIRQ--IRIGTNKDTRGTAFVVYEDIYDAKTA 73
           E    +YVRNLP++ ++E++ ++F   G + Q  I+   +  +RGT  V ++    A+TA
Sbjct: 496 ERGETIYVRNLPWSTSNEDLVELFTTIGKVEQAEIQYEPSGRSRGTGVVRFDSAETAETA 317

Query: 74  VDHLSGFNVANRYL 87
           +    G+    R L
Sbjct: 316 IAKFQGYQYGGRPL 275



 Score = 37.4 bits (85), Expect = 0.001
 Identities = 18/73 (24%), Positives = 40/73 (54%), Gaps = 5/73 (6%)
 Frame = -2

Query: 18  NRVLYVRNLPFNITSEEMYDIF---GKYGAI--RQIRIGTNKDTRGTAFVVYEDIYDAKT 72
           +R ++V NLP+ +  +++ D+F    + G +    + +G +   +G+  VV+E+  DA+ 
Sbjct: 981 SRQIFVANLPYTVGWQDLKDLFRQAARNGVVIRADVHLGPDGRPKGSGIVVFENPEDARN 802

Query: 73  AVDHLSGFNVANR 85
           A+    G++   R
Sbjct: 801 AIQQFHGYDWQGR 763


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.318    0.136    0.377 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,627,352
Number of Sequences: 36976
Number of extensions: 24242
Number of successful extensions: 251
Number of sequences better than 10.0: 96
Number of HSP's better than 10.0 without gapping: 240
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 245
length of query: 124
length of database: 9,014,727
effective HSP length: 84
effective length of query: 40
effective length of database: 5,908,743
effective search space: 236349720
effective search space used: 236349720
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.6 bits)


Medicago: description of AC146941.10