BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146910.4 + phase: 0
(321 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC93710 similar to PIR|T51273|T51273 promoter-binding factor-lik... 148 3e-36
BI310847 similar to GP|13346155|gb| bZIP protein DPBF3 {Arabidop... 135 2e-32
AW696403 similar to GP|13346157|gb| bZIP protein DPBF4 {Arabidop... 116 1e-26
TC90326 similar to GP|13775111|gb|AAK39132.1 bZIP transcription ... 85 2e-22
TC80869 similar to GP|7406677|emb|CAB85632.1 putative ripening-r... 102 3e-22
TC82668 weakly similar to GP|13346157|gb|AAK19602.1 bZIP protein... 100 1e-21
AW684516 similar to GP|13346155|gb| bZIP protein DPBF3 {Arabidop... 94 7e-20
TC88567 similar to SP|P42777|GBF4_ARATH G-box binding factor 4. ... 79 2e-15
BE941734 similar to GP|7406677|emb| putative ripening-related bZ... 74 1e-13
AJ502380 similar to GP|13346159|gb| bZIP protein DPBF5 {Arabidop... 57 1e-08
TC85772 weakly similar to GP|9650828|emb|CAC00658.1 common plant... 48 6e-06
TC85206 similar to GP|16580134|gb|AAK92215.1 bZIP transcription ... 48 6e-06
CB893389 similar to PIR|T48034|T480 bZIP transcription factor-li... 48 6e-06
TC82943 48 6e-06
TC86844 similar to GP|16797791|gb|AAL27150.1 bZIP transcription ... 47 8e-06
TC78431 similar to GP|16797791|gb|AAL27150.1 bZIP transcription ... 47 8e-06
TC77220 similar to GP|22597162|gb|AAN03468.1 bZIP transcription ... 47 1e-05
TC85773 weakly similar to GP|9650828|emb|CAC00658.1 common plant... 47 1e-05
TC77200 similar to GP|22597162|gb|AAN03468.1 bZIP transcription ... 47 1e-05
TC81252 similar to PIR|T52624|T52624 b-Zip DNA binding protein [... 45 4e-05
>TC93710 similar to PIR|T51273|T51273 promoter-binding factor-like protein -
Arabidopsis thaliana, partial (30%)
Length = 598
Score = 148 bits (373), Expect = 3e-36
Identities = 73/90 (81%), Positives = 85/90 (94%)
Frame = +1
Query: 230 DTQTLGRKRVASGIVVEKTVERRQKRMIKNRESAARSRARRQAYTQELELKVSRLEEENE 289
DTQT GRKRVASG+VVEKTVERRQKRMIKNRESAARSRAR+QAYTQELE+KVS LEEENE
Sbjct: 1 DTQTQGRKRVASGVVVEKTVERRQKRMIKNRESAARSRARKQAYTQELEIKVSHLEEENE 180
Query: 290 RLRRQNEMEKEVPTAPPPEPKNQLRRTNSA 319
RL+R +E+E+ +P+ PPP+PK+QLRRT+SA
Sbjct: 181 RLKRLHEIERVLPSMPPPDPKHQLRRTSSA 270
>BI310847 similar to GP|13346155|gb| bZIP protein DPBF3 {Arabidopsis
thaliana}, partial (30%)
Length = 670
Score = 135 bits (340), Expect = 2e-32
Identities = 81/163 (49%), Positives = 101/163 (61%)
Frame = +2
Query: 159 DSNEDSRQKVSHGLHWMQYPVHSVQQQQHQYEKHTMPGFAAVHAIQQPFQVAGNQALDAA 218
DSN Q S G W+QYP Q Q ++ +M + ++ QP + +++
Sbjct: 56 DSNVAVSQFPSQG-QWIQYP----QPQYQHLQQSSMGIYMPSQSMAQPLHMGSGVSMEIP 220
Query: 219 ISPSSLMGTLSDTQTLGRKRVASGIVVEKTVERRQKRMIKNRESAARSRARRQAYTQELE 278
+ S + DTQ GRKR +VEKTVERRQKRMIKNRESAARSRAR+QAYT ELE
Sbjct: 221 FADSHMA---LDTQMPGRKRSTPEDMVEKTVERRQKRMIKNRESAARSRARKQAYTNELE 391
Query: 279 LKVSRLEEENERLRRQNEMEKEVPTAPPPEPKNQLRRTNSASF 321
+KVSRLEEENE LR++ E+E +P AP EPK QLRR S F
Sbjct: 392 IKVSRLEEENEMLRKRKELENMLPCAPIAEPKYQLRRIASCPF 520
>AW696403 similar to GP|13346157|gb| bZIP protein DPBF4 {Arabidopsis
thaliana}, partial (28%)
Length = 587
Score = 116 bits (291), Expect = 1e-26
Identities = 68/140 (48%), Positives = 88/140 (62%), Gaps = 3/140 (2%)
Frame = +2
Query: 1 MGSQGG---TVSESKTLPLSRSGSLYNLTLDEVQNHLGNLGKPLGSMNLDELLKSVWSVE 57
MGSQGG + S+ L R S+Y+LTLDEVQN LG+LGKPL SMNLDELLK+VW+VE
Sbjct: 197 MGSQGGGDGSGKRSQLHSLVRQNSVYSLTLDEVQNQLGDLGKPLSSMNLDELLKNVWTVE 376
Query: 58 AGEVSDFGGSDVAATAGGNMQHNQLGGFNSQESLTLSGDLSKKTVDEVWKDMQGKKRGVD 117
+ ++ A ++ +Q Q SL L SKKTVDEVW+D+Q KK
Sbjct: 377 VNQSTNTDNEGTAQSSEACLQR--------QASLALKAAFSKKTVDEVWRDIQQKKD--S 526
Query: 118 RDRKSREKQQTLGEMTLEDF 137
++KSRE+Q TLGE+ + F
Sbjct: 527 EEKKSRERQTTLGEIDIGGF 586
>TC90326 similar to GP|13775111|gb|AAK39132.1 bZIP transcription factor 6
{Phaseolus vulgaris}, partial (34%)
Length = 872
Score = 85.1 bits (209), Expect(2) = 2e-22
Identities = 50/108 (46%), Positives = 65/108 (59%)
Frame = +2
Query: 2 GSQGGTVSESKTLPLSRSGSLYNLTLDEVQNHLGNLGKPLGSMNLDELLKSVWSVEAGEV 61
G+ GG ++ PL+R S+Y+LT+DE N +G GK GSMN+DELLK++WS E EV
Sbjct: 212 GNGGGRIAAGN-FPLTRQPSVYSLTVDEFMNSMGGSGKDFGSMNMDELLKNIWSAE--EV 382
Query: 62 SDFGGSDVAATAGGNMQHNQLGGFNSQESLTLSGDLSKKTVDEVWKDM 109
GG + + N L Q SLTL LS+KTVDEVWKD+
Sbjct: 383 QTMGGEEAIS--------NHL---QRQGSLTLPRTLSQKTVDEVWKDI 493
Score = 37.7 bits (86), Expect(2) = 2e-22
Identities = 17/23 (73%), Positives = 21/23 (90%)
Frame = +3
Query: 124 EKQQTLGEMTLEDFLVKAGVVGE 146
++Q TLGEMTLE+FLV+AGVV E
Sbjct: 537 QRQPTLGEMTLEEFLVRAGVVRE 605
>TC80869 similar to GP|7406677|emb|CAB85632.1 putative ripening-related bZIP
protein {Vitis vinifera}, partial (23%)
Length = 859
Score = 102 bits (253), Expect = 3e-22
Identities = 62/158 (39%), Positives = 93/158 (58%), Gaps = 2/158 (1%)
Frame = +2
Query: 7 TVSESKTLPLSRSGSLYNLTLDEVQNHLGNLGKPLGSMNLDELLKSVWSVEAGE-VSDFG 65
+V ++ L+ S+Y+LT DE+Q+ +G +GK GSMN+DELLK++W+VE + ++
Sbjct: 233 SVKTPGSVNLASQSSIYSLTFDELQSTIGGVGKDFGSMNMDELLKNIWNVEETQALTSLT 412
Query: 66 GSDVAATAGGNMQHNQLGG-FNSQESLTLSGDLSKKTVDEVWKDMQGKKRGVDRDRKSRE 124
G V G +N GG Q SLTL LS++ VDEVW+D+ D +
Sbjct: 413 GGGV-----GEGPNNPNGGTLQKQGSLTLPRTLSQRKVDEVWRDLM-----KDSGSSMPQ 562
Query: 125 KQQTLGEMTLEDFLVKAGVVGESFHGKESGLLRVDSNE 162
+Q TLGE+TLE+FLV+AGVV + + R ++NE
Sbjct: 563 RQPTLGEVTLEEFLVRAGVVKKDTPNHAQQIERPNNNE 676
>TC82668 weakly similar to GP|13346157|gb|AAK19602.1 bZIP protein DPBF4
{Arabidopsis thaliana}, partial (32%)
Length = 973
Score = 100 bits (248), Expect = 1e-21
Identities = 75/211 (35%), Positives = 106/211 (49%)
Frame = +1
Query: 111 GKKRGVDRDRKSREKQQTLGEMTLEDFLVKAGVVGESFHGKESGLLRVDSNEDSRQKVSH 170
G+K+ D K +++ +LG TLEDFLV+AG+ + GL +D+
Sbjct: 16 GQKKQYGDDVKVEDREMSLGGTTLEDFLVQAGLFAGASTSPTVGLDAMDT---------- 165
Query: 171 GLHWMQYPVHSVQQQQHQYEKHTMPGFAAVHAIQQPFQVAGNQALDAAISPSSLMGTLSD 230
AI Q FQ + ++ SS + +LSD
Sbjct: 166 -------------------------------AIPQSFQP------NTSLVSSSSISSLSD 234
Query: 231 TQTLGRKRVASGIVVEKTVERRQKRMIKNRESAARSRARRQAYTQELELKVSRLEEENER 290
+ GRKR A EK +ERR +R IKNRESAARSRAR+QAY EL KV+ LE++N +
Sbjct: 235 AKP-GRKRDAPD-AYEKALERRLRRKIKNRESAARSRARKQAYHNELVTKVTLLEQQNMQ 408
Query: 291 LRRQNEMEKEVPTAPPPEPKNQLRRTNSASF 321
L+++ E E+ + PEPK +LRR +SA F
Sbjct: 409 LKKEKEFEQGLQPESSPEPKYRLRRISSAIF 501
>AW684516 similar to GP|13346155|gb| bZIP protein DPBF3 {Arabidopsis
thaliana}, partial (10%)
Length = 464
Score = 94.0 bits (232), Expect = 7e-20
Identities = 46/47 (97%), Positives = 46/47 (97%)
Frame = +1
Query: 1 MGSQGGTVSESKTLPLSRSGSLYNLTLDEVQNHLGNLGKPLGSMNLD 47
MGSQGGTVSESKTLPLSRSGSLYNLTLDEVQNHLGNL KPLGSMNLD
Sbjct: 322 MGSQGGTVSESKTLPLSRSGSLYNLTLDEVQNHLGNLXKPLGSMNLD 462
>TC88567 similar to SP|P42777|GBF4_ARATH G-box binding factor 4. [Mouse-ear
cress] {Arabidopsis thaliana}, partial (32%)
Length = 1250
Score = 79.3 bits (194), Expect = 2e-15
Identities = 72/236 (30%), Positives = 111/236 (46%), Gaps = 17/236 (7%)
Frame = +1
Query: 100 KTVDEVWKDM-QGKKRGVDRDRKSREKQQTLGEMTLEDFLVKAGVVGESFHGKESGLLRV 158
+TVD+VW+++ G DR+ K + MTLEDFLVKAG V + G
Sbjct: 262 RTVDDVWREIVAGDAISGDRECKEEISDEM---MTLEDFLVKAGAVEDEEEG-------- 408
Query: 159 DSNEDSRQKVSHGLHWMQYPVHSVQQQQHQYEKHTMPGFAAVHAIQQPFQVAGNQALDAA 218
ED + M P+ T+ G + + ++ FQ G + +D +
Sbjct: 409 ---EDVK---------MTIPL-----------SETLSG-SGMFSLDSSFQ--GIENVDGS 510
Query: 219 I----SPSSLMGTLSDTQTLGRKRVASGIV--VEKTVERRQKRMIKNRESAARSRARRQA 272
+ + + + + + GR + ++ ++K ++RQ+RMIKNRESAARSR R+QA
Sbjct: 511 VIGFGNGNVNVNGVEMVEGGGRGKRGRPVMEQLDKAAQQRQRRMIKNRESAARSRERKQA 690
Query: 273 YTQELELKVSRLEEENERLRRQNE----------MEKEVPTAPPPEPKNQLRRTNS 318
Y ELE +LEEEN++L ++ MEK +P P LRR S
Sbjct: 691 YQVELESLAVKLEEENDKLMKEKAERKKERFKQLMEKVIPVVEQRRPPRLLRRVRS 858
>BE941734 similar to GP|7406677|emb| putative ripening-related bZIP protein
{Vitis vinifera}, partial (18%)
Length = 607
Score = 73.6 bits (179), Expect = 1e-13
Identities = 38/66 (57%), Positives = 49/66 (73%)
Frame = +2
Query: 249 VERRQKRMIKNRESAARSRARRQAYTQELELKVSRLEEENERLRRQNEMEKEVPTAPPPE 308
+ERRQ+RMIKNRESAARSRAR+QAYT ELE +V++L+EENE L+++ E E+ E
Sbjct: 5 IERRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKEENEELQKKQEEIMELQKNQVKE 184
Query: 309 PKNQLR 314
N R
Sbjct: 185 MMNLQR 202
>AJ502380 similar to GP|13346159|gb| bZIP protein DPBF5 {Arabidopsis
thaliana}, partial (13%)
Length = 472
Score = 57.0 bits (136), Expect = 1e-08
Identities = 34/52 (65%), Positives = 37/52 (70%)
Frame = +2
Query: 223 SLMGTLSDTQTLGRKRVASGIVVEKTVERRQKRMIKNRESAARSRARRQAYT 274
SL+ + GRK V VEK VERRQKRMIKNRESAARSRAR+QAYT
Sbjct: 326 SLLSPVPYAINRGRKCVP----VEKGVERRQKRMIKNRESAARSRARKQAYT 469
>TC85772 weakly similar to GP|9650828|emb|CAC00658.1 common plant regulatory
factor 7 {Petroselinum crispum}, partial (64%)
Length = 1224
Score = 47.8 bits (112), Expect = 6e-06
Identities = 35/128 (27%), Positives = 59/128 (45%), Gaps = 8/128 (6%)
Frame = +1
Query: 169 SHGLHWMQYPVHSVQQQQHQYEKHTMPGFAAVHAIQQP--------FQVAGNQALDAAIS 220
SH L Y S+Q H + +H + + P F A+D A S
Sbjct: 487 SHELLINLYSFFSIQI*FH*FYQHNQLNYIVRKIVLLPRSHQSFLVFNKHIGTAIDMASS 666
Query: 221 PSSLMGTLSDTQTLGRKRVASGIVVEKTVERRQKRMIKNRESAARSRARRQAYTQELELK 280
+ S Q G + + + V T ++++KRM NRESA RSR ++Q + ++L +
Sbjct: 667 GGTYSSGTSSLQNSGSEGDHNHVQVNITDQKKRKRMQSNRESARRSRMKKQQHMEDLSNQ 846
Query: 281 VSRLEEEN 288
+ +L++EN
Sbjct: 847 IEQLKKEN 870
>TC85206 similar to GP|16580134|gb|AAK92215.1 bZIP transcription factor
BZI-4 {Nicotiana tabacum}, partial (31%)
Length = 1139
Score = 47.8 bits (112), Expect = 6e-06
Identities = 23/51 (45%), Positives = 35/51 (68%)
Frame = +2
Query: 250 ERRQKRMIKNRESAARSRARRQAYTQELELKVSRLEEENERLRRQNEMEKE 300
ER++KRM+ NRESA RSR R+Q ++L + +L+ EN+RL R + +E
Sbjct: 539 ERKRKRMLSNRESARRSRLRKQQQVEDLTGEAGKLKIENDRLARSIKATEE 691
>CB893389 similar to PIR|T48034|T480 bZIP transcription factor-like protein -
Arabidopsis thaliana, partial (35%)
Length = 724
Score = 47.8 bits (112), Expect = 6e-06
Identities = 23/51 (45%), Positives = 33/51 (64%)
Frame = +1
Query: 250 ERRQKRMIKNRESAARSRARRQAYTQELELKVSRLEEENERLRRQNEMEKE 300
ER++KRMI NRESA RSR R+Q ++ + + +RL EN RL + +E
Sbjct: 205 ERKRKRMISNRESARRSRERKQKLLEDYQDEANRLRNENRRLSENIRVREE 357
>TC82943
Length = 768
Score = 47.8 bits (112), Expect = 6e-06
Identities = 22/32 (68%), Positives = 24/32 (74%)
Frame = +1
Query: 1 MGSQGGTVSESKTLPLSRSGSLYNLTLDEVQN 32
MGS GG + E KT L+R GSLYNLT DEVQN
Sbjct: 652 MGSHGGAIQEQKTGTLAREGSLYNLTFDEVQN 747
>TC86844 similar to GP|16797791|gb|AAL27150.1 bZIP transcription factor
{Nicotiana tabacum}, partial (47%)
Length = 1609
Score = 47.4 bits (111), Expect = 8e-06
Identities = 24/47 (51%), Positives = 32/47 (68%)
Frame = +1
Query: 248 TVERRQKRMIKNRESAARSRARRQAYTQELELKVSRLEEENERLRRQ 294
T +R +RM+ NRESA RSR R+QA+ ELE +VS L EN L ++
Sbjct: 664 TDAKRVRRMLSNRESARRSRRRKQAHLTELETQVSELRGENSSLLKR 804
>TC78431 similar to GP|16797791|gb|AAL27150.1 bZIP transcription factor
{Nicotiana tabacum}, partial (61%)
Length = 1546
Score = 47.4 bits (111), Expect = 8e-06
Identities = 24/46 (52%), Positives = 32/46 (69%)
Frame = +1
Query: 246 EKTVERRQKRMIKNRESAARSRARRQAYTQELELKVSRLEEENERL 291
+ T +R +RM+ NRESA RSR R+QA+ ELE +VS+L EN L
Sbjct: 736 DPTDVKRVRRMLSNRESARRSRRRKQAHLTELETQVSQLRGENSTL 873
>TC77220 similar to GP|22597162|gb|AAN03468.1 bZIP transcription factor ATB2
{Glycine max}, partial (65%)
Length = 1341
Score = 47.0 bits (110), Expect = 1e-05
Identities = 20/42 (47%), Positives = 33/42 (77%)
Frame = +3
Query: 250 ERRQKRMIKNRESAARSRARRQAYTQELELKVSRLEEENERL 291
+R++KRMI NRESA RSR R+Q + +L +++S+L EN+++
Sbjct: 645 QRKRKRMISNRESARRSRMRKQKHLDDLAVQLSQLRNENQQI 770
>TC85773 weakly similar to GP|9650828|emb|CAC00658.1 common plant regulatory
factor 7 {Petroselinum crispum}, partial (62%)
Length = 945
Score = 47.0 bits (110), Expect = 1e-05
Identities = 25/75 (33%), Positives = 44/75 (58%)
Frame = +1
Query: 214 ALDAAISPSSLMGTLSDTQTLGRKRVASGIVVEKTVERRQKRMIKNRESAARSRARRQAY 273
A+D A S + S Q G + + + V T ++++KRM NRESA RSR ++Q +
Sbjct: 157 AIDMASSGGTYSSGTSSLQNSGSEGDHNHVQVNITDQKKRKRMQSNRESARRSRMKKQQH 336
Query: 274 TQELELKVSRLEEEN 288
++L ++ +L++EN
Sbjct: 337 MEDLSNQIEQLKKEN 381
>TC77200 similar to GP|22597162|gb|AAN03468.1 bZIP transcription factor ATB2
{Glycine max}, partial (84%)
Length = 1481
Score = 47.0 bits (110), Expect = 1e-05
Identities = 21/42 (50%), Positives = 32/42 (76%)
Frame = +1
Query: 250 ERRQKRMIKNRESAARSRARRQAYTQELELKVSRLEEENERL 291
+R++KRMI NRESA RSR R+Q + +L +VS+L +EN+ +
Sbjct: 616 QRKRKRMISNRESARRSRMRKQKHLDDLVSQVSKLRKENQEI 741
>TC81252 similar to PIR|T52624|T52624 b-Zip DNA binding protein [imported] -
Arabidopsis thaliana, partial (48%)
Length = 1221
Score = 45.1 bits (105), Expect = 4e-05
Identities = 27/82 (32%), Positives = 47/82 (56%), Gaps = 1/82 (1%)
Frame = +2
Query: 214 ALDAAISPSSLMGTLSDTQ-TLGRKRVASGIVVEKTVERRQKRMIKNRESAARSRARRQA 272
++D + S +++ G + D + + ++A ++ +R KR++ NR+SAARS+ R+
Sbjct: 485 SVDGSTSTTNMFGEIMDAKKAMPPDKLAELWTIDP---KRAKRILANRQSAARSKERKAR 655
Query: 273 YTQELELKVSRLEEENERLRRQ 294
Y QELE KV L+ E L Q
Sbjct: 656 YIQELERKVQTLQTEATTLSAQ 721
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.310 0.127 0.349
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,577,213
Number of Sequences: 36976
Number of extensions: 87701
Number of successful extensions: 619
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 603
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 612
length of query: 321
length of database: 9,014,727
effective HSP length: 96
effective length of query: 225
effective length of database: 5,465,031
effective search space: 1229631975
effective search space used: 1229631975
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 58 (26.9 bits)
Medicago: description of AC146910.4