TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146864.1 + phase: 0 
         (194 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

BF650117 similar to PIR|C86187|C861 YUP8H12.12 [imported] - Arab...    97  5e-21
AW690346 weakly similar to GP|10177738|dbj gene_id:MSG15.11~pir|...    34  0.041
TC89180 weakly similar to GP|13174241|gb|AAK14415.1 putative glu...    29  1.0
TC78205 homologue to PIR|T47559|T47559 60S ribosomal protein-lik...    29  1.3
BI265271 weakly similar to PIR|F86151|F861 hypothetical protein ...    27  5.0
TC80617 weakly similar to PIR|F96672|F96672 Similar to Flavonol ...    27  6.5
TC81029 similar to GP|21553677|gb|AAM62770.1 unknown {Arabidopsi...    26  8.5

>BF650117 similar to PIR|C86187|C861 YUP8H12.12 [imported] - Arabidopsis
           thaliana, partial (25%)
          Length = 604

 Score = 96.7 bits (239), Expect = 5e-21
 Identities = 46/80 (57%), Positives = 63/80 (78%)
 Frame = +2

Query: 46  QRRLELPKELTKNVIQLSCDSMEKGGVCDVYLVGTFHGNKESSKQVEEIVKFLKPEIVFL 105
           ++++ LP+EL++NVI LSC+S  +GGVCDVYLVGT H ++ESSK+V+ IV  LKPE VFL
Sbjct: 311 RQKVTLPEELSRNVIVLSCESSAEGGVCDVYLVGTAHVSEESSKEVQAIVSLLKPEAVFL 490

Query: 106 ELCSDRQEVLLHDNMEVSTI 125
           ELCS R +VL   N++  T+
Sbjct: 491 ELCSSRVQVLTLQNLKXPTM 550


>AW690346 weakly similar to GP|10177738|dbj
           gene_id:MSG15.11~pir||C69291~similar to unknown protein
           {Arabidopsis thaliana}, partial (22%)
          Length = 338

 Score = 33.9 bits (76), Expect = 0.041
 Identities = 14/29 (48%), Positives = 22/29 (75%)
 Frame = +2

Query: 75  VYLVGTFHGNKESSKQVEEIVKFLKPEIV 103
           ++L+GT H +KES+  VE +VK +KP+ V
Sbjct: 251 IWLIGTTHVSKESAMDVERVVKAVKPDNV 337


>TC89180 weakly similar to GP|13174241|gb|AAK14415.1 putative glutamine
           synthetase {Oryza sativa}, partial (26%)
          Length = 989

 Score = 29.3 bits (64), Expect = 1.0
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -3

Query: 14  LRKVIQTTFTTLPCFSTTSAAFCRD 38
           LRK++   F  +PCFS  S  FC++
Sbjct: 225 LRKLLINNFVKIPCFSFLSQHFCKE 151


>TC78205 homologue to PIR|T47559|T47559 60S ribosomal protein-like -
           Arabidopsis thaliana, partial (93%)
          Length = 858

 Score = 28.9 bits (63), Expect = 1.3
 Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 6/55 (10%)
 Frame = +2

Query: 9   CLSTRLRKVIQTT------FTTLPCFSTTSAAFCRDQSPEKERQRRLELPKELTK 57
           CLSTR  K I TT         LPC  + +    R   P+K  +R +ELPK LT+
Sbjct: 149 CLSTRNVKGISTTS*SPQSLHGLPCIGSNT----RRILPKKL*KRGVELPKSLTQ 301


>BI265271 weakly similar to PIR|F86151|F861 hypothetical protein AAF76475.1
           [imported] - Arabidopsis thaliana, partial (16%)
          Length = 662

 Score = 26.9 bits (58), Expect = 5.0
 Identities = 15/43 (34%), Positives = 24/43 (54%), Gaps = 4/43 (9%)
 Frame = +3

Query: 37  RDQSPEKERQRRLELPKELTKN----VIQLSCDSMEKGGVCDV 75
           R+   E+++Q   +LP  + K     + Q+ C S EKG +CDV
Sbjct: 450 RNDITEEQKQAIAKLPFRMEKRCKAVMRQIICFSEEKGRLCDV 578


>TC80617 weakly similar to PIR|F96672|F96672 Similar to Flavonol
           3-O-Glucosyltransferase [imported] - Arabidopsis
           thaliana, partial (32%)
          Length = 941

 Score = 26.6 bits (57), Expect = 6.5
 Identities = 10/21 (47%), Positives = 17/21 (80%)
 Frame = +1

Query: 86  ESSKQVEEIVKFLKPEIVFLE 106
           ++ KQ+E ++K LKP+IVF +
Sbjct: 286 QTDKQIELLLKELKPQIVFFD 348


>TC81029 similar to GP|21553677|gb|AAM62770.1 unknown {Arabidopsis
           thaliana}, partial (43%)
          Length = 783

 Score = 26.2 bits (56), Expect = 8.5
 Identities = 19/60 (31%), Positives = 33/60 (54%), Gaps = 2/60 (3%)
 Frame = -2

Query: 43  KERQRRLELPKELTKNVIQLSCDSMEK--GGVCDVYLVGTFHGNKESSKQVEEIVKFLKP 100
           K++Q++ ++ ++L K +IQL CD  E    G  + +  G +   K+  K+V E  K  KP
Sbjct: 335 KQQQKKKKMKQQL*KQLIQLVCDCCEPE*TGSLNWHRTGLYPKAKQ-RKRVAEKRKKRKP 159


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.324    0.135    0.399 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,908,308
Number of Sequences: 36976
Number of extensions: 94099
Number of successful extensions: 715
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 715
length of query: 194
length of database: 9,014,727
effective HSP length: 91
effective length of query: 103
effective length of database: 5,649,911
effective search space: 581940833
effective search space used: 581940833
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 56 (26.2 bits)