TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146862.9 + phase: 0 
         (100 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC77874 similar to GP|6498433|dbj|BAA87836.1 hypothetical protei...   227  6e-61
BF639973 similar to GP|17065002|gb Unknown protein {Arabidopsis ...    30  0.20
AW690124 similar to GP|20269233|db origin recognition complex 1 ...    28  0.75
AW561047 similar to GP|2398523|emb| Transcription factor {Arabid...    27  1.3
BE239737 homologue to GP|21741701|emb oj991113_30.6 {Oryza sativ...    27  1.3
TC85251 homologue to PIR|JQ2128|JQ2128 metallothionein - soybean...    27  1.7
TC87369 homologue to GP|14517500|gb|AAK62640.1 K16N12.18/K16N12....    26  2.8
AW256686 similar to GP|7269000|emb| contains EST gb:AI998867.1 {...    26  2.8
AL370737                                                               25  3.7
AW694353                                                               25  3.7
BF635948 similar to GP|21622312|emb putative protein {Neurospora...    25  3.7
BQ135848                                                               25  3.7
CB065297 weakly similar to PIR|G83068|G830 hypothetical protein ...    25  4.9
TC85721 similar to SP|P08283|H1_PEA Histone H1. [Garden pea] {Pi...    25  4.9
AW686907 weakly similar to GP|11994523|dbj gb|AAF27143.1~gene_id...    25  4.9
BG448586 homologue to GP|10177020|dbj leucine zipper protein {Ar...    25  4.9
TC85723 similar to SP|P08283|H1_PEA Histone H1. [Garden pea] {Pi...    25  4.9
BQ157983 homologue to GP|8132347|gb|A MAP kinase PsMAPK2 {Pisum ...    25  6.3
TC91323 similar to GP|18086336|gb|AAL57631.1 At1g78060/F28K19_32...    25  6.3
TC91298 similar to GP|3928086|gb|AAC79612.1| unknown protein {Ar...    25  6.3

>TC77874 similar to GP|6498433|dbj|BAA87836.1 hypothetical protein {Oryza
            sativa (japonica cultivar-group)}, partial (42%)
          Length = 1747

 Score =  227 bits (578), Expect = 6e-61
 Identities = 100/100 (100%), Positives = 100/100 (100%)
 Frame = +3

Query: 1    MHRGFKFSITNSIMWQTADRSLIWKQSPEQPSAYPHFPFKARDMNTPIIQYHHPCCYCGV 60
            MHRGFKFSITNSIMWQTADRSLIWKQSPEQPSAYPHFPFKARDMNTPIIQYHHPCCYCGV
Sbjct: 1029 MHRGFKFSITNSIMWQTADRSLIWKQSPEQPSAYPHFPFKARDMNTPIIQYHHPCCYCGV 1208

Query: 61   KSSRGMVRKPGPKQGSLFFGCGNWTATRGARCHYFEWASA 100
            KSSRGMVRKPGPKQGSLFFGCGNWTATRGARCHYFEWASA
Sbjct: 1209 KSSRGMVRKPGPKQGSLFFGCGNWTATRGARCHYFEWASA 1328


>BF639973 similar to GP|17065002|gb Unknown protein {Arabidopsis thaliana},
          partial (22%)
          Length = 679

 Score = 29.6 bits (65), Expect = 0.20
 Identities = 17/46 (36%), Positives = 22/46 (46%), Gaps = 1/46 (2%)
 Frame = +1

Query: 28 PEQPSAYPHFPFK-ARDMNTPIIQYHHPCCYCGVKSSRGMVRKPGP 72
          P  P   PHFPFK     + P  Q+HH  CY   K +   + +P P
Sbjct: 43 PR*PQTQPHFPFKPPLTSSFPSQQHHH--CYPFHKPTHYFILEPEP 174


>AW690124 similar to GP|20269233|db origin recognition complex 1 {Oryza
           sativa (japonica cultivar-group)}, partial (16%)
          Length = 679

 Score = 27.7 bits (60), Expect = 0.75
 Identities = 17/51 (33%), Positives = 24/51 (46%), Gaps = 2/51 (3%)
 Frame = -2

Query: 13  IMWQTADRSLIWKQSPEQPS--AYPHFPFKARDMNTPIIQYHHPCCYCGVK 61
           IMW + +RSL W   P  P+  A  HF     + ++P I    P  +C  K
Sbjct: 210 IMWLSPNRSLFWDHIPPYPTPVAAIHFFPYTLNASSPQIT*LKPLTHCSNK 58


>AW561047 similar to GP|2398523|emb| Transcription factor {Arabidopsis
           thaliana}, partial (18%)
          Length = 659

 Score = 26.9 bits (58), Expect = 1.3
 Identities = 10/22 (45%), Positives = 15/22 (67%)
 Frame = +1

Query: 4   GFKFSITNSIMWQTADRSLIWK 25
           G + SI  S++WQT   SL+W+
Sbjct: 589 GLRQSILGSLLWQTHPGSLLWQ 654


>BE239737 homologue to GP|21741701|emb oj991113_30.6 {Oryza sativa}, partial
           (7%)
          Length = 433

 Score = 26.9 bits (58), Expect = 1.3
 Identities = 18/52 (34%), Positives = 23/52 (43%), Gaps = 6/52 (11%)
 Frame = -2

Query: 42  RDMNTPIIQY---HHPCCYCGVK---SSRGMVRKPGPKQGSLFFGCGNWTAT 87
           R ++T  I Y   HHP C CG +    S+G VR    K     F   + T T
Sbjct: 429 RSVHTTCIAYMNTHHPNCLCGCQCLLQSKGGVRHTSKKVSKSVFCIRSVTTT 274


>TC85251 homologue to PIR|JQ2128|JQ2128 metallothionein - soybean, partial
           (93%)
          Length = 1554

 Score = 26.6 bits (57), Expect = 1.7
 Identities = 12/21 (57%), Positives = 13/21 (61%), Gaps = 2/21 (9%)
 Frame = +3

Query: 79  FGC-GN-WTATRGARCHYFEW 97
           FGC GN W A  G RCH+  W
Sbjct: 720 FGCHGNRWLACDGRRCHHGRW 782


>TC87369 homologue to GP|14517500|gb|AAK62640.1 K16N12.18/K16N12.18
           {Arabidopsis thaliana}, partial (42%)
          Length = 1210

 Score = 25.8 bits (55), Expect = 2.8
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +1

Query: 82  GNWTATRGARCHYFEWAS 99
           G W+A  G  CH+  W S
Sbjct: 700 GKWSACLGCSCHWSSWKS 753


>AW256686 similar to GP|7269000|emb| contains EST gb:AI998867.1 {Arabidopsis
           thaliana}, partial (3%)
          Length = 632

 Score = 25.8 bits (55), Expect = 2.8
 Identities = 10/31 (32%), Positives = 14/31 (44%)
 Frame = -2

Query: 28  PEQPSAYPHFPFKARDMNTPIIQYHHPCCYC 58
           P+Q   Y H+P           + +H CCYC
Sbjct: 295 PDQNQRYSHYPLH---------KCYHHCCYC 230


>AL370737 
          Length = 471

 Score = 25.4 bits (54), Expect = 3.7
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -3

Query: 38  PFKARDMNTPIIQYHHPCCYCGVKS 62
           PF+  +    II Y H  C CG+ S
Sbjct: 133 PFRGEEFVFKIIMYRHIQCLCGLLS 59


>AW694353 
          Length = 366

 Score = 25.4 bits (54), Expect = 3.7
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +3

Query: 26  QSPEQPSAYPHFPFKARDMNTPIIQYHHP 54
           Q P+ P   P F  +     TP++ +HHP
Sbjct: 204 QIPQFPYLLPRFSLRFFLAFTPLLPFHHP 290


>BF635948 similar to GP|21622312|emb putative protein {Neurospora crassa},
           partial (6%)
          Length = 538

 Score = 25.4 bits (54), Expect = 3.7
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +1

Query: 27  SPEQPSAYPHFPFKARDMNTPIIQYHH 53
           SP  PS+   +PF   + N P   +HH
Sbjct: 229 SPPPPSSSSSYPFPHNNNNYPYDHHHH 309


>BQ135848 
          Length = 851

 Score = 25.4 bits (54), Expect = 3.7
 Identities = 11/25 (44%), Positives = 11/25 (44%)
 Frame = -2

Query: 57  YCGVKSSRGMVRKPGPKQGSLFFGC 81
           YC V    G   K GP     FFGC
Sbjct: 754 YCHVIRKHGCRWKVGPHSNDTFFGC 680


>CB065297 weakly similar to PIR|G83068|G830 hypothetical protein PA4607
           [imported] - Pseudomonas aeruginosa (strain PAO1),
           partial (50%)
          Length = 301

 Score = 25.0 bits (53), Expect = 4.9
 Identities = 14/39 (35%), Positives = 18/39 (45%), Gaps = 1/39 (2%)
 Frame = -2

Query: 60  VKSSRGM-VRKPGPKQGSLFFGCGNWTATRGARCHYFEW 97
           ++SSRG+ VR+P P         G W   R AR     W
Sbjct: 198 MRSSRGLQVRRPVPPHRWSVLRLGPWPCLRTARSSCHSW 82


>TC85721 similar to SP|P08283|H1_PEA Histone H1. [Garden pea] {Pisum
           sativum}, partial (60%)
          Length = 995

 Score = 25.0 bits (53), Expect = 4.9
 Identities = 9/22 (40%), Positives = 13/22 (58%)
 Frame = +2

Query: 11  NSIMWQTADRSLIWKQSPEQPS 32
           + + W   ++SL W Q P QPS
Sbjct: 86  HQLTWLQKNQSLQWNQFPSQPS 151


>AW686907 weakly similar to GP|11994523|dbj
          gb|AAF27143.1~gene_id:MUO10.14~similar to unknown
          protein {Arabidopsis thaliana}, partial (8%)
          Length = 664

 Score = 25.0 bits (53), Expect = 4.9
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +3

Query: 9  ITNSIMWQTADRSLIWKQSPEQPSAY 34
          I   IM    D+S+IW   PE+ S Y
Sbjct: 66 IQEKIMKWEEDQSMIWDLGPEETSEY 143


>BG448586 homologue to GP|10177020|dbj leucine zipper protein {Arabidopsis
          thaliana}, partial (6%)
          Length = 188

 Score = 25.0 bits (53), Expect = 4.9
 Identities = 8/12 (66%), Positives = 10/12 (82%), Gaps = 1/12 (8%)
 Frame = -1

Query: 50 QYHHPCC-YCGV 60
          +YH PCC YCG+
Sbjct: 86 EYHQPCCYYCGL 51


>TC85723 similar to SP|P08283|H1_PEA Histone H1. [Garden pea] {Pisum
          sativum}, partial (50%)
          Length = 684

 Score = 25.0 bits (53), Expect = 4.9
 Identities = 9/22 (40%), Positives = 13/22 (58%)
 Frame = +2

Query: 11 NSIMWQTADRSLIWKQSPEQPS 32
          + + W   ++SL W Q P QPS
Sbjct: 35 HQLTWLQKNQSLQWNQFPSQPS 100


>BQ157983 homologue to GP|8132347|gb|A MAP kinase PsMAPK2 {Pisum sativum},
           partial (3%)
          Length = 948

 Score = 24.6 bits (52), Expect = 6.3
 Identities = 11/29 (37%), Positives = 13/29 (43%)
 Frame = -2

Query: 52  HHPCCYCGVKSSRGMVRKPGPKQGSLFFG 80
           H PC Y  V      +  P P  G+LF G
Sbjct: 392 HSPCVYTPV*CRHDYISYPIPPVGALFIG 306


>TC91323 similar to GP|18086336|gb|AAL57631.1 At1g78060/F28K19_32
          {Arabidopsis thaliana}, partial (25%)
          Length = 720

 Score = 24.6 bits (52), Expect = 6.3
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = +1

Query: 23 IWKQSPEQPSAYPHFPFKARDMNTPIIQYHH 53
          +W      P + P FPF +  +   ++ YHH
Sbjct: 25 LWPSHQPLPLS-PSFPFSSLSLTQSLLSYHH 114


>TC91298 similar to GP|3928086|gb|AAC79612.1| unknown protein {Arabidopsis
           thaliana}, partial (66%)
          Length = 777

 Score = 24.6 bits (52), Expect = 6.3
 Identities = 10/24 (41%), Positives = 14/24 (57%)
 Frame = +2

Query: 34  YPHFPFKARDMNTPIIQYHHPCCY 57
           +  +PF+ R    PI+Q HH  CY
Sbjct: 428 FHRYPFRQR----PILQTHHKNCY 487


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.325    0.137    0.491 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,221,153
Number of Sequences: 36976
Number of extensions: 85530
Number of successful extensions: 660
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 660
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 660
length of query: 100
length of database: 9,014,727
effective HSP length: 76
effective length of query: 24
effective length of database: 6,204,551
effective search space: 148909224
effective search space used: 148909224
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 50 (23.9 bits)