TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146856.7 + phase: 0 
         (241 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC79129 similar to PIR|A96725|A96725 hypothetical protein F20P5....   122  9e-29
BI270081 similar to GP|6448480|emb cyclin D1 {Antirrhinum majus}...    97  7e-21
TC88466 similar to GP|6434199|emb|CAB60837.1 CycD3;2 {Lycopersic...    74  1e-20
TC90916 similar to PIR|T09961|T09961 cyclin D-like protein - red...    81  3e-16
TC81503 similar to GP|6448480|emb|CAB61221.1 cyclin D1 {Antirrhi...    81  3e-16
TC89856 homologue to GP|4583990|emb|CAB40540.1 cyclin D3 {Medica...    69  2e-12
BG587739 GP|18147003|db cyclin D2 {Sus scrofa}, partial (3%)           53  9e-08
AW696887 similar to PIR|T07669|T07 cyclin a1-type  mitosis-speci...    48  4e-06
TC88465 similar to GP|6434201|emb|CAB60838.1 CycD3;3 {Lycopersic...    42  3e-04
AL377325 homologue to GP|3608181|dbj cyclin B {Pisum sativum}, p...    40  6e-04
TC92772 similar to GP|19347837|gb|AAL86330.1 putative prolyl end...    39  0.002
TC82233 homologue to PIR|T09598|T09598 cyclin 4  D-type - alfalf...    38  0.004
TC84953 weakly similar to PIR|T39562|T39562 60S ribosomal protei...    33  0.076
TC82818 similar to GP|20259203|gb|AAM14317.1 unknown protein {Ar...    30  1.1
TC82837 similar to GP|20197453|gb|AAC73041.2 expressed protein {...    28  2.4
CA860191 homologue to GP|19697342|gb hypothetical protein {Dicty...    28  3.2
TC92268 similar to GP|4803836|dbj|BAA77516.1 a dynamin-like prot...    28  4.1
AW697253 similar to GP|12597289|gb| FasL isoform {Homo sapiens},...    27  5.4
TC79847 similar to GP|21689689|gb|AAM67466.1 unknown protein {Ar...    27  5.4
TC87824 homologue to GP|16612249|gb|AAL27496.1 AT4g35230/F23E12_...    27  5.4

>TC79129 similar to PIR|A96725|A96725 hypothetical protein F20P5.7
           [imported] - Arabidopsis thaliana, partial (64%)
          Length = 1328

 Score =  122 bits (307), Expect = 9e-29
 Identities = 82/230 (35%), Positives = 124/230 (53%), Gaps = 6/230 (2%)
 Frame = +2

Query: 14  LMCHEQDESTLIFEEDEDESTFFINSSLDNNNNNPWFLLDDEEEYIQYLFKQETGL--GF 71
           L+C E  +S+ +   D  E +  ++SS  +   +     ++EEE I    + E     GF
Sbjct: 143 LLCGE--DSSEVLTGDLPECSSDLDSSSSSQLPSSSLFAEEEEESIAVFIEHEFKFVPGF 316

Query: 72  GSITHFLCYDDHDVEVEDDDSSKSLFWLRNARLHAIDWIFNTQAKFGFTVQTAYLSINYF 131
             ++ F               S+SL    + R  AI WI      +GF   TAYLS+NY 
Sbjct: 317 DYVSRF--------------QSRSLE--SSTREEAIAWILKVHEYYGFQPLTAYLSVNYM 448

Query: 132 DRFLSKRSIDESKPWAIQLLSVACLSIAAKMEEQSVPPLSEYPIE---YRFENKVIKNME 188
           DRFL  R + ES  W +QLLSVACLS+AAKMEE  VP L ++ IE   Y F+ + I  ME
Sbjct: 449 DRFLDSRPLPESNGWPLQLLSVACLSLAAKMEEPLVPSLLDFQIEGAKYIFQPRTILRME 628

Query: 189 LLILSTLEWKMGLPTPFAYLHYFFTKF-CNGSRSETIITKATQHIVTMVK 237
           LL+L+ L+W++   TP ++L +F  K    G+ +  II++AT+ I++ ++
Sbjct: 629 LLVLTILDWRLRSITPLSFLSFFACKLDSTGTFTHFIISRATEIILSNIQ 778


>BI270081 similar to GP|6448480|emb cyclin D1 {Antirrhinum majus}, partial
           (50%)
          Length = 663

 Score = 96.7 bits (239), Expect = 7e-21
 Identities = 51/113 (45%), Positives = 76/113 (67%), Gaps = 4/113 (3%)
 Frame = +2

Query: 129 NYFDRFLSKRSIDESKPWAIQLLSVACLSIAAKMEEQSVPPLSEYPIE---YRFENKVIK 185
           NY DRFL+ R + ++  W +QLLSVACLS+AAKMEE  VP L +  +E   Y FE   I+
Sbjct: 2   NYMDRFLNSRRLPQTNGWPLQLLSVACLSLAAKMEETLVPSLLDLQVEGVKYMFEPITIR 181

Query: 186 NMELLILSTLEWKMGLPTPFAYLHYFFTKFCNGSR-SETIITKATQHIVTMVK 237
            MELL+LS L+W++   TPF++L +F  K  + S  +  +I++ATQ I++ ++
Sbjct: 182 RMELLVLSVLDWRLRSVTPFSFLSFFACKLDSTSTFTGFLISRATQIILSKIQ 340


>TC88466 similar to GP|6434199|emb|CAB60837.1 CycD3;2 {Lycopersicon
           esculentum}, partial (39%)
          Length = 692

 Score = 74.3 bits (181), Expect(2) = 1e-20
 Identities = 35/77 (45%), Positives = 46/77 (59%)
 Frame = +2

Query: 99  LRNARLHAIDWIFNTQAKFGFTVQTAYLSINYFDRFLSKRSIDESKPWAIQLLSVACLSI 158
           L  AR  +I+WI    A + F+  T+ L++NY DRFL        KPW  QL +VACLS+
Sbjct: 185 LETARRESIEWILKVNAHYSFSALTSVLAVNYLDRFLFSFRFQNEKPWMTQLAAVACLSL 364

Query: 159 AAKMEEQSVPPLSEYPI 175
           AAKMEE  VP L +  +
Sbjct: 365 AAKMEETHVPLLLDLQV 415



 Score = 42.4 bits (98), Expect(2) = 1e-20
 Identities = 19/32 (59%), Positives = 23/32 (71%)
 Frame = +1

Query: 177 YRFENKVIKNMELLILSTLEWKMGLPTPFAYL 208
           Y FE K IK ME+LILSTL WKM   TP +++
Sbjct: 502 YLFEAKTIKKMEILILSTLGWKMNPATPLSFI 597


>TC90916 similar to PIR|T09961|T09961 cyclin D-like protein - red goosefoot,
           partial (31%)
          Length = 886

 Score = 81.3 bits (199), Expect = 3e-16
 Identities = 43/102 (42%), Positives = 69/102 (67%), Gaps = 5/102 (4%)
 Frame = +3

Query: 142 ESKPWAIQLLSVACLSIAAKMEEQSVPPLSEYPI---EYRFENKVIKNMELLILSTLEWK 198
           + + W +QLL+VACLS+AAK+EE +VP   +  I   ++ FE K I+ MELL+LSTL+W+
Sbjct: 18  KGRAWTMQLLAVACLSLAAKVEETAVPQPLDLQIGESKFVFEAKTIQRMELLVLSTLKWR 197

Query: 199 MGLPTPFAYLHYFFTKFCNGSRS--ETIITKATQHIVTMVKG 238
           M   TPF+++  F +K  +  +S   + I+++TQ I + +KG
Sbjct: 198 MQAITPFSFIECFLSKIKDDDKSSLSSSISRSTQLISSTIKG 323


>TC81503 similar to GP|6448480|emb|CAB61221.1 cyclin D1 {Antirrhinum majus},
           partial (36%)
          Length = 1000

 Score = 81.3 bits (199), Expect = 3e-16
 Identities = 58/162 (35%), Positives = 82/162 (49%)
 Frame = +3

Query: 9   FSLSSLMCHEQDESTLIFEEDEDESTFFINSSLDNNNNNPWFLLDDEEEYIQYLFKQETG 68
           F+ S L+C E+  S L      D  T     S  +  + P      E+E+I  L + +  
Sbjct: 180 FTDSDLLCGEETSSIL----SSDSPT----ESFSDGESYP----PPEDEFIAGLIEDQGK 323

Query: 69  LGFGSITHFLCYDDHDVEVEDDDSSKSLFWLRNARLHAIDWIFNTQAKFGFTVQTAYLSI 128
              G         D+ V++      KS  +  +AR  +I WI   Q  +GF   TAYL++
Sbjct: 324 FVIGF--------DYFVKM------KSSSFDSDARDESIRWILKVQGYYGFQPVTAYLAV 461

Query: 129 NYFDRFLSKRSIDESKPWAIQLLSVACLSIAAKMEEQSVPPL 170
           NY DRFL+ R + ++  W +QLLSVACLS+AAKMEE  VP L
Sbjct: 462 NYMDRFLNSRRLPQTNGWPLQLLSVACLSLAAKMEETLVPSL 587


>TC89856 homologue to GP|4583990|emb|CAB40540.1 cyclin D3 {Medicago sativa},
           partial (41%)
          Length = 689

 Score = 68.6 bits (166), Expect = 2e-12
 Identities = 48/157 (30%), Positives = 73/157 (45%), Gaps = 13/157 (8%)
 Frame = +1

Query: 13  SLMCHEQ--------DESTLIFEEDEDESTFFINSS-LDNNNNNPWFLLD----DEEEYI 59
           +L CHE+        DE  ++ EE E       N+  LD+ +  P  LL+    +++E +
Sbjct: 256 ALYCHEEKWEDDDNDDEGEVVDEEGEQSYVTTTNNDILDSTSLLPLLLLEQNLFNKDEEL 435

Query: 60  QYLFKQETGLGFGSITHFLCYDDHDVEVEDDDSSKSLFWLRNARLHAIDWIFNTQAKFGF 119
             LF +E       I     YDD    +  D        L   R  A++W+    A +GF
Sbjct: 436 NTLFSKE------KIQQETYYDDLKNVMNFDS-------LTQPRREAVEWMLKVNAHYGF 576

Query: 120 TVQTAYLSINYFDRFLSKRSIDESKPWAIQLLSVACL 156
           +  TA L++NY DRFL      + KPW IQL++V C+
Sbjct: 577 SALTATLAVNYLDRFLLSFHFQKEKPWMIQLVAVTCI 687


>BG587739 GP|18147003|db cyclin D2 {Sus scrofa}, partial (3%)
          Length = 519

 Score = 53.1 bits (126), Expect = 9e-08
 Identities = 33/86 (38%), Positives = 45/86 (51%)
 Frame = +3

Query: 77  FLCYDDHDVEVEDDDSSKSLFWLRNARLHAIDWIFNTQAKFGFTVQTAYLSINYFDRFLS 136
           FL   DH   +    + KS  +  + R   I  I  +Q    F     YL+INY DRFL+
Sbjct: 204 FLIESDHIPPLNYFQNLKSNEFDASVRTDFISLI--SQLSCNFDPFVTYLAINYLDRFLA 377

Query: 137 KRSIDESKPWAIQLLSVACLSIAAKM 162
            + I + KPWA +LL+V C S+A KM
Sbjct: 378 NQGILQPKPWANKLLAVTCFSLAVKM 455


>AW696887 similar to PIR|T07669|T07 cyclin a1-type  mitosis-specific -
           soybean, partial (33%)
          Length = 648

 Score = 47.8 bits (112), Expect = 4e-06
 Identities = 25/73 (34%), Positives = 41/73 (55%)
 Frame = +3

Query: 101 NARLHAIDWIFNTQAKFGFTVQTAYLSINYFDRFLSKRSIDESKPWAIQLLSVACLSIAA 160
           N R   +DW+     ++    +T +LS++Y DRFLS   +  SK   +QLL V+ + IA+
Sbjct: 435 NMRGTLVDWLVEVADEYKLLPETLHLSVSYIDRFLSIEPVSRSK---LQLLGVSSMLIAS 605

Query: 161 KMEEQSVPPLSEY 173
           K EE + P   ++
Sbjct: 606 KYEEITPPKAVDF 644


>TC88465 similar to GP|6434201|emb|CAB60838.1 CycD3;3 {Lycopersicon
           esculentum}, partial (30%)
          Length = 637

 Score = 41.6 bits (96), Expect = 3e-04
 Identities = 18/36 (50%), Positives = 24/36 (66%)
 Frame = +3

Query: 179 FENKVIKNMELLILSTLEWKMGLPTPFAYLHYFFTK 214
           FE K IK ME+LILSTL WKM   TP +++ +   +
Sbjct: 9   FEAKTIKKMEILILSTLGWKMNPATPLSFIDFIIRR 116


>AL377325 homologue to GP|3608181|dbj cyclin B {Pisum sativum}, partial (45%)
          Length = 329

 Score = 40.4 bits (93), Expect = 6e-04
 Identities = 21/66 (31%), Positives = 39/66 (58%), Gaps = 2/66 (3%)
 Frame = +2

Query: 148 IQLLSVACLSIAAKMEEQSVPPLSEYPI--EYRFENKVIKNMELLILSTLEWKMGLPTPF 205
           +QL+ ++ + +A+K EE   P ++++    +  + ++ I  ME  IL  LEW + +PTPF
Sbjct: 14  LQLVGISAMLMASKYEEIWPPEVNDFVCLSDRAYSHEQILIMEKTILGKLEWTLTVPTPF 193

Query: 206 AYLHYF 211
            +L  F
Sbjct: 194 VFLVRF 211


>TC92772 similar to GP|19347837|gb|AAL86330.1 putative prolyl endopeptidase
           {Arabidopsis thaliana}, partial (14%)
          Length = 531

 Score = 38.5 bits (88), Expect = 0.002
 Identities = 19/63 (30%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
 Frame = +3

Query: 148 IQLLSVACLSIAAKMEEQSVPPLSEYPI--EYRFENKVIKNMELLILSTLEWKMGLPTPF 205
           +QL+ ++ + IA+K EE   P ++++    +  +  + +  ME  IL  LEW + +PTP+
Sbjct: 333 LQLVGISSMLIASKYEEIWAPEVNDFVCISDNAYVREQVLVMEKTILRNLEWYLTVPTPY 512

Query: 206 AYL 208
            +L
Sbjct: 513 VFL 521


>TC82233 homologue to PIR|T09598|T09598 cyclin 4  D-type - alfalfa, partial
           (51%)
          Length = 1011

 Score = 37.7 bits (86), Expect = 0.004
 Identities = 18/36 (50%), Positives = 24/36 (66%)
 Frame = +1

Query: 179 FENKVIKNMELLILSTLEWKMGLPTPFAYLHYFFTK 214
           FE K I+ MELLILSTL+WKM   T  ++L +   +
Sbjct: 4   FEAKTIQRMELLILSTLKWKMHPVTTHSFLDHIIRR 111


>TC84953 weakly similar to PIR|T39562|T39562 60S ribosomal protein L32 -
           fission yeast (Schizosaccharomyces pombe), partial (86%)
          Length = 442

 Score = 33.5 bits (75), Expect = 0.076
 Identities = 22/79 (27%), Positives = 40/79 (49%), Gaps = 3/79 (3%)
 Frame = -3

Query: 55  EEEYIQYLFKQETGLGFGSITHFLCYDDHDVEVEDDDSSKSLF---WLRNARLHAIDWIF 111
           ++E +Q +  +E+GLG GS+T     D  D  V  + SS S+    WL  A   ++  + 
Sbjct: 224 DQESLQSVGSEESGLGVGSVT-----DGDDWLVSSESSSHSVIDTSWLSPAWSQSVIKVA 60

Query: 112 NTQAKFGFTVQTAYLSINY 130
               + G ++  A+L +N+
Sbjct: 59  RESGELGSSLVEAFLLLNW 3


>TC82818 similar to GP|20259203|gb|AAM14317.1 unknown protein {Arabidopsis
            thaliana}, partial (43%)
          Length = 1176

 Score = 29.6 bits (65), Expect = 1.1
 Identities = 26/112 (23%), Positives = 48/112 (42%), Gaps = 2/112 (1%)
 Frame = -2

Query: 110  IFNTQAKFGFTVQTAYLSINYFDRFLSKRSIDESKPWAIQLLSVACLSIAAKMEE--QSV 167
            + +  A   F ++T Y  +N     + + + D  K + + ++    L+ A K +   + V
Sbjct: 1016 VMDNHALISFPIKTVYFQLN-----IPQITKDIRKLYIVHVMP---LTKACKQKT*LKLV 861

Query: 168  PPLSEYPIEYRFENKVIKNMELLILSTLEWKMGLPTPFAYLHYFFTKFCNGS 219
            PP+S     +RF +K I++  + ILS           F  L+     FC  S
Sbjct: 860  PPIS-----FRFSSKAIRSFSIFILSFSSLNFSNSRSFFLLNLSHLNFCFSS 720


>TC82837 similar to GP|20197453|gb|AAC73041.2 expressed protein {Arabidopsis
           thaliana}, partial (52%)
          Length = 913

 Score = 28.5 bits (62), Expect = 2.4
 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
 Frame = +3

Query: 17  HEQDESTLI---FEEDEDESTFFINSSLDNNNNN 47
           +E D ST++     EDEDE     +S  DNN+NN
Sbjct: 114 NEDDTSTMLSPSHNEDEDEIEDAADSDADNNDNN 215


>CA860191 homologue to GP|19697342|gb hypothetical protein {Dictyostelium
           discoideum}, partial (1%)
          Length = 504

 Score = 28.1 bits (61), Expect = 3.2
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = +2

Query: 27  EEDEDESTFFINSSLDNNNNN 47
           EE+EDE T   NS+ +NNN+N
Sbjct: 272 EEEEDEFTTTFNSNNNNNNSN 334



 Score = 27.3 bits (59), Expect = 5.4
 Identities = 14/35 (40%), Positives = 22/35 (62%)
 Frame = +2

Query: 13  SLMCHEQDESTLIFEEDEDESTFFINSSLDNNNNN 47
           +L   E++E     EEDE  +TF  N++ +N+NNN
Sbjct: 236 TLQNDEEEEEEDEEEEDEFTTTFNSNNNNNNSNNN 340


>TC92268 similar to GP|4803836|dbj|BAA77516.1 a dynamin-like protein ADL3
           {Arabidopsis thaliana}, partial (35%)
          Length = 1034

 Score = 27.7 bits (60), Expect = 4.1
 Identities = 38/176 (21%), Positives = 68/176 (38%), Gaps = 8/176 (4%)
 Frame = +1

Query: 1   MGSYVGTPFSLSSLMCHEQDESTL------IFEEDEDESTFFINSSLDNNNNNPWFLLDD 54
           MG + G           +QD+ T       +   D + +  ++    D      WF+L++
Sbjct: 481 MGQHSGGNLKSMKEKSGQQDKDTQEVSSLKVAGPDGEITAGYLFKKSDKGWTKRWFVLNE 660

Query: 55  EEEYIQYLFKQETGLGFGSITHFLCYDDHDVEVEDDDSSKSLFWLRNARLHAIDWIFNTQ 114
           +   + Y  KQE     G+IT   C  D ++  ED+  +KS    ++ + + +D    + 
Sbjct: 661 KSGKLGYTKKQEERHFRGTITLEECNID-EISDEDEAPAKS---SKDKKSNGLDSGKASN 828

Query: 115 AKFGFTVQTAYLSINYFDR--FLSKRSIDESKPWAIQLLSVACLSIAAKMEEQSVP 168
             F  T +  Y +I        L   S+ +   W  +L  VA       + E S P
Sbjct: 829 LIFKITSKVPYKTIMKAQSTVLLKAESMVDKAEWINKLRKVAQAKGGQAIGEPSFP 996


>AW697253 similar to GP|12597289|gb| FasL isoform {Homo sapiens}, partial
           (16%)
          Length = 761

 Score = 27.3 bits (59), Expect = 5.4
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +2

Query: 27  EEDEDESTFFINSSLDNNNNNP 48
           EE+E+E    I    +NNNNNP
Sbjct: 143 EEEEEEEVRIIRRRRNNNNNNP 208


>TC79847 similar to GP|21689689|gb|AAM67466.1 unknown protein {Arabidopsis
            thaliana}, partial (44%)
          Length = 1504

 Score = 27.3 bits (59), Expect = 5.4
 Identities = 12/41 (29%), Positives = 21/41 (50%)
 Frame = +1

Query: 59   IQYLFKQETGLGFGSITHFLCYDDHDVEVEDDDSSKSLFWL 99
            I +   Q + + FG+     C+ ++D ++ DDD    L WL
Sbjct: 1381 IMFFLSQISSVSFGTANLLYCHMNND-DMNDDDDINILIWL 1500


>TC87824 homologue to GP|16612249|gb|AAL27496.1 AT4g35230/F23E12_210
           {Arabidopsis thaliana}, partial (36%)
          Length = 895

 Score = 27.3 bits (59), Expect = 5.4
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +1

Query: 27  EEDEDESTFFINSSLDNNNNNP 48
           EE+E+E    I    +NNNNNP
Sbjct: 151 EEEEEEEVRIIRRRRNNNNNNP 216


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.320    0.136    0.412 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,622,179
Number of Sequences: 36976
Number of extensions: 131740
Number of successful extensions: 764
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 745
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 754
length of query: 241
length of database: 9,014,727
effective HSP length: 93
effective length of query: 148
effective length of database: 5,575,959
effective search space: 825241932
effective search space used: 825241932
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)