TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146856.2 + phase: 0 
         (88 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

BG646992 similar to PIR|T06133|T061 hypothetical protein F23E12....    28  0.47
TC83853 weakly similar to GP|13877665|gb|AAK43910.1 Unknown prot...    26  2.3
BF003873 similar to GP|14715222|em putative polyprotein {Cicer a...    25  5.2
TC88588 similar to PIR|T08400|T08400 late embryonic abundant pro...    25  5.2
TC86409 similar to PIR|C96632|C96632 hypothetical protein F8A5.2...    24  8.9
TC76454 similar to PIR|T04124|T04124 receptor-like protein kinas...    24  8.9
TC79584 similar to GP|20197980|gb|AAM15335.1 Expressed protein {...    24  8.9

>BG646992 similar to PIR|T06133|T061 hypothetical protein F23E12.200 -
           Arabidopsis thaliana, partial (11%)
          Length = 761

 Score = 28.5 bits (62), Expect = 0.47
 Identities = 14/42 (33%), Positives = 19/42 (44%)
 Frame = +1

Query: 39  EDEDEMRTSWPSPILEDKVVEGDGNDTYSLDSKHATEPGIRN 80
           ++EDE    +   ++E KVV  DG          A  PG RN
Sbjct: 241 DEEDESEVEYEVHVVEKKVVNDDGKPKSKSKPNSAFRPGNRN 366


>TC83853 weakly similar to GP|13877665|gb|AAK43910.1 Unknown protein
           {Arabidopsis thaliana}, partial (49%)
          Length = 815

 Score = 26.2 bits (56), Expect = 2.3
 Identities = 11/46 (23%), Positives = 18/46 (38%)
 Frame = +3

Query: 5   PLKVLGTRSLRTPQGIKTQMLVQWKGLSPEEATWEDEDEMRTSWPS 50
           PL+ + T+   +   +   +LV W    P  A W         +PS
Sbjct: 216 PLRTIHTKETPSEPSLLLPLLVHWNNFHPHRAPWYCRRHFLPCFPS 353


>BF003873 similar to GP|14715222|em putative polyprotein {Cicer arietinum},
           partial (82%)
          Length = 559

 Score = 25.0 bits (53), Expect = 5.2
 Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = +2

Query: 12  RSLRTPQGIKTQML-VQWKGLSPEEATWEDEDEMRTSWP 49
           R ++T +G +  ++ V W   + E  TWE E +M  S+P
Sbjct: 251 RKVKTLRGKEIPLVRVVWDRANGESLTWELESKMVESYP 367


>TC88588 similar to PIR|T08400|T08400 late embryonic abundant protein EMB8
           homolog F18B3.70 - Arabidopsis thaliana, partial (83%)
          Length = 1522

 Score = 25.0 bits (53), Expect = 5.2
 Identities = 12/39 (30%), Positives = 16/39 (40%)
 Frame = -3

Query: 10  GTRSLRTPQGIKTQMLVQWKGLSPEEATWEDEDEMRTSW 48
           G +  R P  I       W  LS +  TW +ED+    W
Sbjct: 146 GRKRSRAPPSISKDG*GCWMRLSVDIVTWTEEDDDDDKW 30


>TC86409 similar to PIR|C96632|C96632 hypothetical protein F8A5.21
           [imported] - Arabidopsis thaliana, partial (70%)
          Length = 1345

 Score = 24.3 bits (51), Expect = 8.9
 Identities = 16/32 (50%), Positives = 19/32 (59%)
 Frame = +3

Query: 1   MDHQPLKVLGTRSLRTPQGIKTQMLVQWKGLS 32
           M H P+K L  R LRT   IK ++L Q  GLS
Sbjct: 291 MLHIPMKFLSERHLRTYHEIKFRLL-QSLGLS 383


>TC76454 similar to PIR|T04124|T04124 receptor-like protein kinase (EC
           2.7.1.-) - rice, partial (29%)
          Length = 1269

 Score = 24.3 bits (51), Expect = 8.9
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +3

Query: 17  PQGIKTQMLVQWKGLSPEEATWE 39
           PQG  +Q L  WK    E  +W+
Sbjct: 183 PQGALSQHLFHWKSFGLEPLSWK 251


>TC79584 similar to GP|20197980|gb|AAM15335.1 Expressed protein {Arabidopsis
           thaliana}, partial (78%)
          Length = 866

 Score = 24.3 bits (51), Expect = 8.9
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = -1

Query: 2   DHQPLKVLGTRSLRTPQGIKTQMLVQWKGLSPEEATWEDE 41
           DH  ++V     +R  +G++ Q L + KGL+     WE E
Sbjct: 242 DHVTMRVASDTLVRE-KGVRKQWLEEEKGLASIHDIWERE 126


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.307    0.128    0.379 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,590,512
Number of Sequences: 36976
Number of extensions: 28943
Number of successful extensions: 103
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 101
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 103
length of query: 88
length of database: 9,014,727
effective HSP length: 64
effective length of query: 24
effective length of database: 6,648,263
effective search space: 159558312
effective search space used: 159558312
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 51 (24.3 bits)