BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146807.6 + phase: 0
(374 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC86267 similar to PIR|T48498|T48498 hypothetical protein T28J14... 736 0.0
TC86266 similar to PIR|T48498|T48498 hypothetical protein T28J14... 303 9e-83
TC79078 similar to GP|9759271|dbj|BAB09592.1 contains similarity... 154 3e-46
TC78564 similar to PIR|E84689|E84689 probable RING zinc finger a... 107 7e-24
TC87150 similar to PIR|E84689|E84689 probable RING zinc finger a... 107 1e-23
TC85563 similar to GP|14279688|gb|AAK58690.1 receptor-like kinas... 93 1e-19
TC84600 similar to PIR|T48498|T48498 hypothetical protein T28J14... 92 3e-19
TC88575 weakly similar to GP|21554034|gb|AAM63115.1 unknown {Ara... 51 8e-07
TC76810 homologue to GP|17645764|emb|CAD19054. unnamed protein p... 49 3e-06
TC86890 weakly similar to GP|4406801|gb|AAD20110.1| unknown prot... 48 7e-06
TC79526 weakly similar to GP|14586362|emb|CAC42893. putative pro... 47 9e-06
TC85569 homologue to SP|P27879|HS11_MEDSA 18.1 kDa class I heat ... 45 5e-05
TC93215 similar to GP|10177503|dbj|BAB10897. ankyrin repeat prot... 43 2e-04
TC93455 similar to PIR|D84448|D84448 probable ankyrin [imported]... 42 4e-04
TC79525 similar to GP|14586362|emb|CAC42893. putative protein {A... 42 5e-04
AW687078 similar to PIR|E84689|E84 probable RING zinc finger ank... 40 0.001
TC81895 weakly similar to PIR|T48577|T48577 hypothetical protein... 39 0.003
TC90335 similar to PIR|T07651|T07651 potassium channel protein S... 39 0.004
BG587066 similar to PIR|E84725|E84 ankyrin-like protein [importe... 38 0.006
TC87961 weakly similar to GP|4406801|gb|AAD20110.1| unknown prot... 38 0.007
>TC86267 similar to PIR|T48498|T48498 hypothetical protein T28J14.210 -
Arabidopsis thaliana, partial (81%)
Length = 2182
Score = 736 bits (1900), Expect = 0.0
Identities = 349/349 (100%), Positives = 349/349 (100%)
Frame = +1
Query: 26 SELSKFVNKTADAGITALHMAALNGYFDCVQLLLDLNANASAATYHYGTSMDLIGAGSTP 85
SELSKFVNKTADAGITALHMAALNGYFDCVQLLLDLNANASAATYHYGTSMDLIGAGSTP
Sbjct: 865 SELSKFVNKTADAGITALHMAALNGYFDCVQLLLDLNANASAATYHYGTSMDLIGAGSTP 1044
Query: 86 LHYAACGGNLKCCQILLSKGATRMALNCNGWLPLDVARMWGRHWLEPLLAPSSDTIVSSF 145
LHYAACGGNLKCCQILLSKGATRMALNCNGWLPLDVARMWGRHWLEPLLAPSSDTIVSSF
Sbjct: 1045 LHYAACGGNLKCCQILLSKGATRMALNCNGWLPLDVARMWGRHWLEPLLAPSSDTIVSSF 1224
Query: 146 PTSNYLLLPLMSVLNIAREYGLHSPTTSSNEIDFCAVCLERPCTVAAEGCMHELCVRCAL 205
PTSNYLLLPLMSVLNIAREYGLHSPTTSSNEIDFCAVCLERPCTVAAEGCMHELCVRCAL
Sbjct: 1225 PTSNYLLLPLMSVLNIAREYGLHSPTTSSNEIDFCAVCLERPCTVAAEGCMHELCVRCAL 1404
Query: 206 YLCSTANVSSEMHGPPGSVPCPLCRHGIISFVKLPSFQPKENKLHASLSMCTPCIQHPRD 265
YLCSTANVSSEMHGPPGSVPCPLCRHGIISFVKLPSFQPKENKLHASLSMCTPCIQHPRD
Sbjct: 1405 YLCSTANVSSEMHGPPGSVPCPLCRHGIISFVKLPSFQPKENKLHASLSMCTPCIQHPRD 1584
Query: 266 IDQSSFSHNTSEIRKNRVASVSSEMLCPVTCTPFPSVAIPLCTCNDGPCPPFEPGEDETQ 325
IDQSSFSHNTSEIRKNRVASVSSEMLCPVTCTPFPSVAIPLCTCNDGPCPPFEPGEDETQ
Sbjct: 1585 IDQSSFSHNTSEIRKNRVASVSSEMLCPVTCTPFPSVAIPLCTCNDGPCPPFEPGEDETQ 1764
Query: 326 DESPRHSQASTTDQDKMEGPKLVKKTCSNMFWGRRSCSRENQCNSEINA 374
DESPRHSQASTTDQDKMEGPKLVKKTCSNMFWGRRSCSRENQCNSEINA
Sbjct: 1765 DESPRHSQASTTDQDKMEGPKLVKKTCSNMFWGRRSCSRENQCNSEINA 1911
Score = 40.0 bits (92), Expect = 0.001
Identities = 23/72 (31%), Positives = 37/72 (50%)
Frame = +1
Query: 32 VNKTADAGITALHMAALNGYFDCVQLLLDLNANASAATYHYGTSMDLIGAGSTPLHYAAC 91
VN G TAL A +GY++ VQ L+ N A Y +G T LH+AA
Sbjct: 583 VNSRNYCGQTALMQACRHGYWEVVQTLMLYRCNVMKADYL---------SGRTALHFAAV 735
Query: 92 GGNLKCCQILLS 103
G+++C +++++
Sbjct: 736 SGHVRCIRLVVA 771
Score = 29.3 bits (64), Expect = 2.6
Identities = 31/101 (30%), Positives = 46/101 (44%), Gaps = 5/101 (4%)
Frame = +1
Query: 11 LCILYSCYSFTSCRCSELSKFVNKTADA-GITA----LHMAALNGYFDCVQLLLDLNANA 65
L ++ Y T C E F+ K ++ G +A L AA +G D V+ + L N
Sbjct: 304 LIFVFFGYLLTQLFCLE-DFFIRKMGNSFGCSASGERLVSAARDG--DLVEAKMLLEFNP 474
Query: 66 SAATYHYGTSMDLIGAGSTPLHYAACGGNLKCCQILLSKGA 106
A Y G ++PLH+AA G+ + +LL KGA
Sbjct: 475 CLAKY------STFGGLNSPLHFAASKGHNEIVALLLEKGA 579
>TC86266 similar to PIR|T48498|T48498 hypothetical protein T28J14.210 -
Arabidopsis thaliana, partial (53%)
Length = 1058
Score = 303 bits (775), Expect = 9e-83
Identities = 145/174 (83%), Positives = 155/174 (88%)
Frame = +3
Query: 26 SELSKFVNKTADAGITALHMAALNGYFDCVQLLLDLNANASAATYHYGTSMDLIGAGSTP 85
S LSKFVNKTAD GITALHMA+LNGYFDCVQLLLDLNAN S+ T+HYGTSMDLI AGSTP
Sbjct: 537 SALSKFVNKTADGGITALHMASLNGYFDCVQLLLDLNANMSSVTFHYGTSMDLIRAGSTP 716
Query: 86 LHYAACGGNLKCCQILLSKGATRMALNCNGWLPLDVARMWGRHWLEPLLAPSSDTIVSSF 145
LHYAACGGNLKCCQILL++GA+RMALN NGWLPLD+ARMWGRHWLEPLLAP SD SF
Sbjct: 717 LHYAACGGNLKCCQILLARGASRMALNGNGWLPLDIARMWGRHWLEPLLAPISDAGTPSF 896
Query: 146 PTSNYLLLPLMSVLNIAREYGLHSPTTSSNEIDFCAVCLERPCTVAAEGCMHEL 199
P SNYL LPLMS LNIAREYGL S TTSS+EI+FCAVCLERPC+ AA GC HEL
Sbjct: 897 PHSNYLPLPLMSALNIAREYGLRSSTTSSDEIEFCAVCLERPCSXAAXGCGHEL 1058
>TC79078 similar to GP|9759271|dbj|BAB09592.1 contains similarity to
ankyrin~gene_id:MRI1.10 {Arabidopsis thaliana}, partial
(18%)
Length = 1185
Score = 154 bits (388), Expect(2) = 3e-46
Identities = 77/151 (50%), Positives = 95/151 (61%), Gaps = 5/151 (3%)
Frame = +1
Query: 112 NCNGWLPLDVARMWGRHWLEPLLAPSSDTIVSSFPTSNYLLLPLMSVLNIAREYGLHSPT 171
N NGW PL VAR W R WLE L + P S Y+ LPLMS++ IARE G +
Sbjct: 91 NANGWTPLMVARSWHRSWLEDTLKEPPAENLQVLP-SPYISLPLMSIVKIARECGWRTSE 267
Query: 172 TSSNEIDFCAVCLERPCTVAAEGCMHELCVRCALYLCSTANVSSEMHGPPGSVPCPLCRH 231
+ +D CAVCLER C VA EGC HE C +CALYLCST + S+ +GPPGS+ CPLCRH
Sbjct: 268 LAPICLDPCAVCLERKCMVAVEGCDHEFCTQCALYLCSTNSTSTRTNGPPGSIACPLCRH 447
Query: 232 GIISFVKLPSFQP-----KENKLHASLSMCT 257
I+SFVKLP +P + + + SL+ CT
Sbjct: 448 SIVSFVKLPDTRPLPKVMQRSTTNLSLTFCT 540
Score = 49.3 bits (116), Expect(2) = 3e-46
Identities = 21/36 (58%), Positives = 26/36 (71%)
Frame = +3
Query: 85 PLHYAACGGNLKCCQILLSKGATRMALNCNGWLPLD 120
PLHYAACGGN +CCQ+L++KGA+ A C LD
Sbjct: 9 PLHYAACGGNAQCCQLLIAKGASLTA*XCKWMDSLD 116
>TC78564 similar to PIR|E84689|E84689 probable RING zinc finger ankyrin
protein [imported] - Arabidopsis thaliana, partial (80%)
Length = 1875
Score = 107 bits (267), Expect = 7e-24
Identities = 88/283 (31%), Positives = 126/283 (44%), Gaps = 30/283 (10%)
Frame = +3
Query: 30 KFVNKTADAGITALHMAALNGYFDCVQLLLDLNANASAATYHYGTSMDLIGAGSTPLHYA 89
+FVN G T LH+A+ +CV +LLD A A+T YG GSTPLH A
Sbjct: 525 RFVNVRDGKGATPLHLASRQRRPECVHILLDSGALVCASTGRYGYP------GSTPLHLA 686
Query: 90 ACGGNLKCCQILLSKGATRMALNCNGWLPLDVARMWGRHW----------LEPLLAPSSD 139
A GG+L C + LL+ GA R+ + +G +P VA M RH EPL+ PS
Sbjct: 687 ARGGSLDCIRELLAWGADRIQRDSSGRIPYMVA-MKHRHGSCASLLNPTSAEPLVWPSPL 863
Query: 140 TIVSSF-PTSNYLLLPLMSVLNIARE--------YGLHSPTTSS---------NEIDFCA 181
++ P + LL + N RE Y L SP+ S +E + C
Sbjct: 864 KFINELNPEAKALLEQALMDANREREKDILKGKFYPLPSPSQSDCVDDNISEVSESELCC 1043
Query: 182 VCLERPCTVAAEGCMHELCVRCALYLC--STANVSSEMHGPPGSVPCPLCRHGIISFVKL 239
+C E+ CT+ + C H++C +C L LC + N ++ PP CP CR I+
Sbjct: 1044ICFEQVCTIEVQNCGHQMCAQCTLALCCYNKPNPTTTSITPP---VCPFCRSNIVRL--- 1205
Query: 240 PSFQPKENKLHASLSMCTPCIQHPRDIDQSSFSHNTSEIRKNR 282
M I++ + DQ + N S+I K+R
Sbjct: 1206---------------MVVMKIENHDETDQDNVDINCSKINKSR 1289
>TC87150 similar to PIR|E84689|E84689 probable RING zinc finger ankyrin
protein [imported] - Arabidopsis thaliana, partial (80%)
Length = 1820
Score = 107 bits (266), Expect = 1e-23
Identities = 88/277 (31%), Positives = 124/277 (43%), Gaps = 44/277 (15%)
Frame = +2
Query: 1 MLTIKYCFNNLCILYSCY-SFTSCRCSELS--------------KFVNKTADAGITALHM 45
+L C C+ Y+ Y +SC + LS +FVN G T LH+
Sbjct: 488 VLMFDVCHGRTCLHYAAYYGHSSCLKAILSAARSSPVAASWGFARFVNIRDGRGATPLHL 667
Query: 46 AALNGYFDCVQLLLDLNANASAATYHYGTSMDLIGAGSTPLHYAACGGNLKCCQILLSKG 105
AA +CV +LL A A+T YG GSTPLH AA GG+L C + LL+ G
Sbjct: 668 AARQRRPECVHILLCSGALVCASTSRYGCP------GSTPLHLAAKGGSLDCIRELLAWG 829
Query: 106 ATRMALNCNGWLPLDVARMWGRHWL----------EPLLAPSSDTIVSSF-PTSNYLLLP 154
A R+ + +G +P VA + +H +PL+ PSS I+S P + L
Sbjct: 830 ADRLQRDASGRIPYVVALKY-KHGACAALLNLSSAQPLVWPSSLKIISELNPEAKV*LEQ 1006
Query: 155 LMSVLNIARE--------YGLHSPTTSS--------NEIDFCAVCLERPCTVAAEGCMHE 198
+ N RE Y L SP + +E + C +C E+ CT+ + C H+
Sbjct: 1007ALLDANREREKNI*KGSPYSLPSPHSDRIDDNISEVSETELCCICFEQVCTIEVQDCGHQ 1186
Query: 199 LCVRCALYLC--STANVSSEMHGPPGSVPCPLCRHGI 233
+C +C L LC + AN S+ PP CP CR I
Sbjct: 1187MCAQCTLTLCCHNKANTSTSHPIPP---ICPFCRSAI 1288
Score = 35.8 bits (81), Expect = 0.027
Identities = 51/193 (26%), Positives = 71/193 (36%), Gaps = 3/193 (1%)
Frame = +2
Query: 43 LHMAALNGYFDCVQLLLDLNANASAATYHYGTSMDLIGAGSTPLHYAACGGNLKCCQILL 102
LH+AA NG + LLD + N L TPL AA G + C + LL
Sbjct: 323 LHIAAANGQIQVLSRLLDGSTNPDV----------LNRQKQTPLMLAAMHGKIDCVEKLL 472
Query: 103 SKGATRMALN-CNGWLPLDVARMWGR-HWLEPLL-APSSDTIVSSFPTSNYLLLPLMSVL 159
GA + + C+G L A +G L+ +L A S + +S+ + + +
Sbjct: 473 EAGANVLMFDVCHGRTCLHYAAYYGHSSCLKAILSAARSSPVAASWGFARF--------V 628
Query: 160 NIAREYGLHSPTTSSNEIDFCAVCLERPCTVAAEGCMHELCVRCALYLCSTANVSSEMHG 219
NI G A L C+H L AL ST+ +G
Sbjct: 629 NIRDGRG--------------ATPLHLAARQRRPECVHILLCSGALVCASTSR-----YG 751
Query: 220 PPGSVPCPLCRHG 232
PGS P L G
Sbjct: 752 CPGSTPLHLAAKG 790
>TC85563 similar to GP|14279688|gb|AAK58690.1 receptor-like kinase
Xa21-binding protein 3 {Oryza sativa}, partial (71%)
Length = 2214
Score = 93.2 bits (230), Expect = 1e-19
Identities = 81/296 (27%), Positives = 121/296 (40%), Gaps = 29/296 (9%)
Frame = +3
Query: 13 ILYSCYSFTSCRCSELSKFVNKTADAGITALHMAALNGYFDCVQLLLDLNANASAATYHY 72
IL + +S ++FVN G T LH+AA + +C+ LLD A A+T Y
Sbjct: 546 ILSAAHSSPVAESWGFARFVNIRDGNGATPLHLAARHRRLECLHSLLDNGALVCASTGGY 725
Query: 73 GTSMDLIGAGSTPLHYAACGGNLKCCQILLSKGATRMALNCNGWLPLDVARMWGRHWLEP 132
G G TPLH AA GG++ C ++LL+ GA R+ L+ +G +P VA
Sbjct: 726 GFP------GRTPLHMAARGGSVDCVRMLLAWGADRLQLDSSGRIPFTVALKNKHRACAA 887
Query: 133 LLAPSSDT----------IVSSFPTSNYLLLPLMSVLNIAREYGL-------HSPTTSS- 174
LL PSS I + LL + N RE L SP S
Sbjct: 888 LLDPSSAAPLVWPSPLKFISELNQEAKALLENALLEANREREKALLKENDIPSSPLRSDC 1067
Query: 175 -----------NEIDFCAVCLERPCTVAAEGCMHELCVRCALYLCSTANVSSEMHGPPGS 223
+ ++ C +C ++ CT+ + C H++C C L LC G
Sbjct: 1068KYDDIVSDSEESNMELCCICFDQVCTIEVKPCDHQMCAHCTLALCCLKKPDPATGCTTGP 1247
Query: 224 VPCPLCRHGIISFVKLPSFQPKENKLHASLSMCTPCIQHPRDIDQSSFSHNTSEIR 279
V CP CR I+ + ++ +S + PR +S+FS +S +
Sbjct: 1248V-CPFCRGAILQLNVAKIKTDSDTEVESSPT-------KPRRSRKSNFSEGSSSFK 1391
>TC84600 similar to PIR|T48498|T48498 hypothetical protein T28J14.210 -
Arabidopsis thaliana, partial (4%)
Length = 521
Score = 92.0 bits (227), Expect = 3e-19
Identities = 41/47 (87%), Positives = 44/47 (93%)
Frame = +3
Query: 328 SPRHSQASTTDQDKMEGPKLVKKTCSNMFWGRRSCSRENQCNSEINA 374
SPRHSQ STTDQDK+EGPKL K TCSN+FWGRRSCSRE+QCNSEINA
Sbjct: 3 SPRHSQTSTTDQDKIEGPKLDKTTCSNIFWGRRSCSREHQCNSEINA 143
>TC88575 weakly similar to GP|21554034|gb|AAM63115.1 unknown {Arabidopsis
thaliana}, partial (76%)
Length = 917
Score = 50.8 bits (120), Expect = 8e-07
Identities = 31/77 (40%), Positives = 43/77 (55%)
Frame = +2
Query: 28 LSKFVNKTADAGITALHMAALNGYFDCVQLLLDLNANASAATYHYGTSMDLIGAGSTPLH 87
LS +++ + G TALH+ L G+F+C QLLL+ AN A MD GA PLH
Sbjct: 266 LSGSIDEPVEDGDTALHLTCLYGHFECAQLLLERGANLEA--------MDEDGA--IPLH 415
Query: 88 YAACGGNLKCCQILLSK 104
A GG + Q+LL++
Sbjct: 416 DACAGGFINIVQLLLNR 466
Score = 37.7 bits (86), Expect = 0.007
Identities = 21/60 (35%), Positives = 32/60 (53%)
Frame = +2
Query: 60 DLNANASAATYHYGTSMDLIGAGSTPLHYAACGGNLKCCQILLSKGATRMALNCNGWLPL 119
DLNA A G+ + + G T LH G+ +C Q+LL +GA A++ +G +PL
Sbjct: 233 DLNALRLAIDNLSGSIDEPVEDGDTALHLTCLYGHFECAQLLLERGANLEAMDEDGAIPL 412
>TC76810 homologue to GP|17645764|emb|CAD19054. unnamed protein product
{Glycine max}, partial (98%)
Length = 1439
Score = 48.9 bits (115), Expect = 3e-06
Identities = 31/86 (36%), Positives = 40/86 (46%)
Frame = +2
Query: 39 GITALHMAALNGYFDCVQLLLDLNANASAATYHYGTSMDLIGAGSTPLHYAACGGNLKCC 98
G TALH A G C Q LL+ A A + T+ LHYAA G +C
Sbjct: 851 GRTALHFACGYGEVKCAQALLEAGAKVDALDKNKNTA----------LHYAAGYGRKECV 1000
Query: 99 QILLSKGATRMALNCNGWLPLDVARM 124
+LL GA N +G P+DVA++
Sbjct: 1001ALLLENGAAVTLQNMDGKTPIDVAKL 1078
Score = 33.9 bits (76), Expect = 0.10
Identities = 20/46 (43%), Positives = 24/46 (51%)
Frame = +2
Query: 82 GSTPLHYAACGGNLKCCQILLSKGATRMALNCNGWLPLDVARMWGR 127
G T LH+A G +KC Q LL GA AL+ N L A +GR
Sbjct: 851 GRTALHFACGYGEVKCAQALLEAGAKVDALDKNKNTALHYAAGYGR 988
>TC86890 weakly similar to GP|4406801|gb|AAD20110.1| unknown protein
{Arabidopsis thaliana}, partial (54%)
Length = 2446
Score = 47.8 bits (112), Expect = 7e-06
Identities = 26/67 (38%), Positives = 36/67 (52%)
Frame = +3
Query: 39 GITALHMAALNGYFDCVQLLLDLNANASAATYHYGTSMDLIGAGSTPLHYAACGGNLKCC 98
G LH AA G+ DC++LLL L+A+ G+TPLH+AA GNL+ C
Sbjct: 711 GRCPLHWAAYKGFADCIRLLLFLDAHRGRPDKD----------GTTPLHWAAMRGNLEAC 860
Query: 99 QILLSKG 105
+L+ G
Sbjct: 861 TVLVQAG 881
Score = 42.0 bits (97), Expect = 4e-04
Identities = 27/96 (28%), Positives = 46/96 (47%)
Frame = +3
Query: 32 VNKTADAGITALHMAALNGYFDCVQLLLDLNANASAATYHYGTSMDLIGAGSTPLHYAAC 91
VN+ G AL AALN Q +++ + +A + +G T LH++A
Sbjct: 390 VNEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNATDH----------SGQTALHWSAV 539
Query: 92 GGNLKCCQILLSKGATRMALNCNGWLPLDVARMWGR 127
G ++ ++LL +GA A + NG+ VA +G+
Sbjct: 540 RGAIQVAELLLQEGARVNAADMNGYQITHVAAQYGQ 647
>TC79526 weakly similar to GP|14586362|emb|CAC42893. putative protein
{Arabidopsis thaliana}, partial (72%)
Length = 797
Score = 47.4 bits (111), Expect = 9e-06
Identities = 30/96 (31%), Positives = 47/96 (48%)
Frame = +3
Query: 32 VNKTADAGITALHMAALNGYFDCVQLLLDLNANASAATYHYGTSMDLIGAGSTPLHYAAC 91
+N D G TALHMAA NG+ + V+ L+ A+ ++ +TPLH+A
Sbjct: 303 LNSKDDQGRTALHMAAANGHVNIVEYLISKGADLNSENVE----------KNTPLHWACL 452
Query: 92 GGNLKCCQILLSKGATRMALNCNGWLPLDVARMWGR 127
G+++ + L+ GA LN P+D A G+
Sbjct: 453 NGHVEVVKKLIIAGANVSVLNSYERTPMDEAVTRGK 560
>TC85569 homologue to SP|P27879|HS11_MEDSA 18.1 kDa class I heat shock
protein (Fragment). [Alfalfa] {Medicago sativa}, partial
(48%)
Length = 623
Score = 45.1 bits (105), Expect = 5e-05
Identities = 17/63 (26%), Positives = 29/63 (45%)
Frame = +2
Query: 172 TSSNEIDFCAVCLERPCTVAAEGCMHELCVRCALYLCSTANVSSEMHGPPGSVPCPLCRH 231
+ + ++ C +C ++ CT+ + C H++C C L LC G CP CR
Sbjct: 338 SEESNMELCCICFDQVCTIEVKPCDHQMCAHCTLALCCLKKPDPATGCTTGPA-CPFCRG 514
Query: 232 GII 234
I+
Sbjct: 515 AIL 523
>TC93215 similar to GP|10177503|dbj|BAB10897. ankyrin repeat protein EMB506
{Arabidopsis thaliana}, partial (31%)
Length = 775
Score = 42.7 bits (99), Expect = 2e-04
Identities = 31/97 (31%), Positives = 44/97 (44%)
Frame = +1
Query: 39 GITALHMAALNGYFDCVQLLLDLNANASAATYHYGTSMDLIGAGSTPLHYAACGGNLKCC 98
G T LH A G V+LL+ N + + A G TPLH A N
Sbjct: 19 GATPLHYAVEVGAKQTVKLLIKYNVDVNVAD----------NEGWTPLHVAVQSRNRDIA 168
Query: 99 QILLSKGATRMALNCNGWLPLDVARMWGRHWLEPLLA 135
+ILL+ GA R N +G LD++ +G+ ++ LA
Sbjct: 169 KILLANGADRSTENKDGKTALDISICYGKDFMSYDLA 279
>TC93455 similar to PIR|D84448|D84448 probable ankyrin [imported] -
Arabidopsis thaliana, partial (51%)
Length = 471
Score = 42.0 bits (97), Expect = 4e-04
Identities = 37/116 (31%), Positives = 54/116 (45%)
Frame = +2
Query: 19 SFTSCRCSELSKFVNKTADAGITALHMAALNGYFDCVQLLLDLNANASAATYHYGTSMDL 78
+F S LSK ++ + + LH+AA G+ V++LL + +ASA + G
Sbjct: 119 TFESLSSESLSKALSLRNEDDRSLLHVAASFGHSKVVKILL--SCDASAEVINSGDE--- 283
Query: 79 IGAGSTPLHYAACGGNLKCCQILLSKGATRMALNCNGWLPLDVARMWGRHWLEPLL 134
G PLH AA GN + + LL+KGA N G L A GR + +L
Sbjct: 284 --EGWAPLHSAASIGNSEILEALLNKGADVNIKNNGGRAALHYAASKGRMKIAEIL 445
>TC79525 similar to GP|14586362|emb|CAC42893. putative protein {Arabidopsis
thaliana}, partial (53%)
Length = 562
Score = 41.6 bits (96), Expect = 5e-04
Identities = 24/75 (32%), Positives = 39/75 (52%)
Frame = +2
Query: 32 VNKTADAGITALHMAALNGYFDCVQLLLDLNANASAATYHYGTSMDLIGAGSTPLHYAAC 91
+N D G TALHMAA NG+ + V+ L+ A+ ++ +TPLH+A
Sbjct: 353 LNSKDDQGRTALHMAAANGHVNIVEYLISKGADLNSENVE----------KNTPLHWACL 502
Query: 92 GGNLKCCQILLSKGA 106
G+++ + L+ GA
Sbjct: 503 NGHVEVVKKLIIAGA 547
>AW687078 similar to PIR|E84689|E84 probable RING zinc finger ankyrin protein
[imported] - Arabidopsis thaliana, partial (28%)
Length = 574
Score = 40.0 bits (92), Expect = 0.001
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +2
Query: 175 NEIDFCAVCLERPCTVAAEGCMHELCVRCALYLC 208
+ ++ C +C ++ CT+ + C H++C C L LC
Sbjct: 443 SNMELCCICFDQVCTIEVKPCDHQMCAHCTLALC 544
>TC81895 weakly similar to PIR|T48577|T48577 hypothetical protein T31B5.120
- Arabidopsis thaliana, partial (16%)
Length = 853
Score = 38.9 bits (89), Expect = 0.003
Identities = 26/84 (30%), Positives = 38/84 (44%)
Frame = +2
Query: 39 GITALHMAALNGYFDCVQLLLDLNANASAATYHYGTSMDLIGAGSTPLHYAACGGNLKCC 98
G T LH+A V+LLL AN +A G TPLH G
Sbjct: 278 GCTLLHIACETADIGMVELLLQYGANINATDMR----------GRTPLHRCILKGRSIIA 427
Query: 99 QILLSKGATRMALNCNGWLPLDVA 122
++LLS+G A++ +G P+++A
Sbjct: 428 RLLLSRGGDPRAVDEDGRTPIELA 499
>TC90335 similar to PIR|T07651|T07651 potassium channel protein SKT1 - potato,
partial (49%)
Length = 1353
Score = 38.5 bits (88), Expect = 0.004
Identities = 26/75 (34%), Positives = 36/75 (47%)
Frame = +2
Query: 33 NKTADAGITALHMAALNGYFDCVQLLLDLNANASAATYHYGTSMDLIGAGSTPLHYAACG 92
N++ + G TALH+AA G +CV LLLD AN + G+ L A G
Sbjct: 1034 NESDNNGRTALHIAACKGKENCVLLLLDYGANPNIRD----------SDGNVALWEAILG 1183
Query: 93 GNLKCCQILLSKGAT 107
G+ ++L GAT
Sbjct: 1184 GHESVTKLLAENGAT 1228
>BG587066 similar to PIR|E84725|E84 ankyrin-like protein [imported] -
Arabidopsis thaliana, partial (32%)
Length = 656
Score = 38.1 bits (87), Expect = 0.006
Identities = 25/64 (39%), Positives = 34/64 (53%)
Frame = +2
Query: 41 TALHMAALNGYFDCVQLLLDLNANASAATYHYGTSMDLIGAGSTPLHYAACGGNLKCCQI 100
TALH AA G+ D V LLL+ ++N + + G T LH AA G+L+ +
Sbjct: 32 TALHTAATQGHIDVVNLLLESDSNLAKIARN---------NGKTVLHSAARMGHLEVVKA 184
Query: 101 LLSK 104
LLSK
Sbjct: 185 LLSK 196
>TC87961 weakly similar to GP|4406801|gb|AAD20110.1| unknown protein
{Arabidopsis thaliana}, partial (59%)
Length = 841
Score = 37.7 bits (86), Expect = 0.007
Identities = 28/89 (31%), Positives = 42/89 (46%)
Frame = +3
Query: 39 GITALHMAALNGYFDCVQLLLDLNANASAATYHYGTSMDLIGAGSTPLHYAACGGNLKCC 98
G AL A+LN + V L+ A+ +A DL+ T LH+AA G +
Sbjct: 474 GYYALQWASLNNFHHIVLYLIQHGADVNAK--------DLML--QTALHWAAVRGAMAAA 623
Query: 99 QILLSKGATRMALNCNGWLPLDVARMWGR 127
+LL GA A + NG+ + VA +G+
Sbjct: 624 DVLLENGARVEAADINGYRAVHVAAQYGQ 710
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.321 0.134 0.434
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,741,975
Number of Sequences: 36976
Number of extensions: 305749
Number of successful extensions: 1976
Number of sequences better than 10.0: 91
Number of HSP's better than 10.0 without gapping: 1889
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1948
length of query: 374
length of database: 9,014,727
effective HSP length: 98
effective length of query: 276
effective length of database: 5,391,079
effective search space: 1487937804
effective search space used: 1487937804
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)
Medicago: description of AC146807.6