TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146806.1 - phase: 0 
         (790 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

BQ124492 weakly similar to GP|9909168|dbj| putative transposable...    85  1e-16
TC90577 homologue to GP|23499197|emb|CAD51277. hypothetical prot...    46  5e-05
BF519578                                                               41  0.002
TC77036 similar to GP|22135902|gb|AAM91533.1 membrane related pr...    30  2.7
TC84421 similar to GP|16549089|dbj|BAB70751. respiratory burst o...    30  2.7
TC85701 weakly similar to GP|20149064|gb|AAM12787.1 putative ant...    29  6.1

>BQ124492 weakly similar to GP|9909168|dbj| putative transposable element
           Tip100 protein {Oryza sativa (japonica cultivar-group)},
           partial (8%)
          Length = 694

 Score = 84.7 bits (208), Expect = 1e-16
 Identities = 40/94 (42%), Positives = 65/94 (68%)
 Frame = +1

Query: 693 LKGLSDLCAILVETNKCKTFALVFKLLKLALLLPVATASVERVFSAMKIVKSHLRNKMGD 752
           L  + +LC+ LV T + K + L+ +LL+L + LPV+TA+ ER FSAM I+K+ LRNKMG 
Sbjct: 79  LSTIQELCSCLVATERNKIYFLIDRLLRLIMTLPVSTATTERSFSAMNIIKTRLRNKMGS 258

Query: 753 QWLNDRLVTFIERDVLFTISTDVILAHFQQMDDR 786
            +LND +  +IER++  +IS++ ++  F+ +  R
Sbjct: 259 GFLNDTMTVYIEREISASISSESVIDDFKLVGSR 360


>TC90577 homologue to GP|23499197|emb|CAD51277. hypothetical protein
           conserved {Plasmodium falciparum 3D7}, partial (1%)
          Length = 599

 Score = 46.2 bits (108), Expect = 5e-05
 Identities = 20/38 (52%), Positives = 26/38 (67%)
 Frame = +2

Query: 750 MGDQWLNDRLVTFIERDVLFTISTDVILAHFQQMDDRR 787
           MGD+W+ND LVT+IERDV   I  ++I+  F  M  RR
Sbjct: 353 MGDEWMNDYLVTYIERDVADKIDDELIIQRFHNMQPRR 466


>BF519578 
          Length = 558

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 23/60 (38%), Positives = 31/60 (51%)
 Frame = +2

Query: 602 NLHHYKNDCLFSVLDLQLQELNARFDEENTELLQCVSCLSPAKSFSAFDVNKLLRMAELY 661
           NL+H++    F V++  +QELN +    N E L CVS   P   F AFD  KL+     Y
Sbjct: 173 NLYHFQL*VFFQVVERLIQELNNKIT*VNNEQLVCVSNSCP*DLFFAFDKKKLINFTLFY 352


>TC77036 similar to GP|22135902|gb|AAM91533.1 membrane related protein CP5
           putative {Arabidopsis thaliana}, partial (15%)
          Length = 541

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 18/51 (35%), Positives = 25/51 (48%), Gaps = 7/51 (13%)
 Frame = -3

Query: 595 PPVSSVSNLHHYKNDCL-------FSVLDLQLQELNARFDEENTELLQCVS 638
           PP  S +NLH +   C        FS+  L+L ELN    + +  L+ CVS
Sbjct: 488 PPSFSSTNLHKFCKSCSVTILLNPFSLSPLELHELN*MKHDNHMPLISCVS 336


>TC84421 similar to GP|16549089|dbj|BAB70751. respiratory burst oxidase
           homolog {Solanum tuberosum}, partial (8%)
          Length = 689

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 17/45 (37%), Positives = 19/45 (41%)
 Frame = -1

Query: 362 RFGGLKTLIQNENPSAHYVHCFAHQLQLALVACAKTHKPVSGFFG 406
           RF      I N N    YV C+ H   + L AC      VS FFG
Sbjct: 563 RFSVSTANILNGNGVITYVQCYLHHFTIVLEACTFVLASVSLFFG 429


>TC85701 weakly similar to GP|20149064|gb|AAM12787.1 putative anthocyanidine
            rhamnosyl-transferase {Capsicum annuum}, partial (32%)
          Length = 1755

 Score = 29.3 bits (64), Expect = 6.1
 Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
 Frame = -3

Query: 371  QNENPSAHYVHCFAHQLQL-ALVACAKTHKPVSGFFGKVNMLVNFIRASNKRQEMLRDKQ 429
            QN+N S  Y+H   H+L+  A V  +     V  FF ++  ++     S+  +   +  Q
Sbjct: 1198 QNQNHSDSYIHQLLHELRF*AEVPMSSKQFRVLSFFPQILQVIQVYPLSDSSKPKRKTTQ 1019

Query: 430  LAQF 433
             AQF
Sbjct: 1018 KAQF 1007


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.321    0.137    0.402 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,448,868
Number of Sequences: 36976
Number of extensions: 328394
Number of successful extensions: 1655
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1644
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1655
length of query: 790
length of database: 9,014,727
effective HSP length: 104
effective length of query: 686
effective length of database: 5,169,223
effective search space: 3546086978
effective search space used: 3546086978
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)