TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146794.13 + phase: 0 /pseudo
         (818 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

BF003873 similar to GP|14715222|em putative polyprotein {Cicer a...   106  6e-29
BG644693 weakly similar to GP|18767374|g Putative 22 kDa kafirin...    62  1e-09
TC86737 weakly similar to GP|6683624|dbj|BAA89272.1 Pol {Alterna...    55  1e-07
BG587145 similar to PIR|H86337|H8 protein F5M15.26 [imported] - ...    49  1e-05
BG452991 PIR|A25875|A25 histone H4 - Tetrahymena thermophila, pa...    42  0.001
TC84979                                                                31  2.2

>BF003873 similar to GP|14715222|em putative polyprotein {Cicer arietinum},
           partial (82%)
          Length = 559

 Score =  106 bits (264), Expect(2) = 6e-29
 Identities = 47/66 (71%), Positives = 55/66 (83%)
 Frame = +1

Query: 690 WSCLEIEEVDAEVYWPVSDIRKSWNSGI*SGFATTSFEFA*CVSCVATSEVCIGSIACDS 749
           W+C E++EVD E++W VSDIRKSWN G+ SG  T SFEFA*C+SCVATSEVC GSI+CD 
Sbjct: 7   WTCFEVKEVDCEIHWSVSDIRKSWNGGVSSGITTASFEFA*CLSCVATSEVCSGSISCDP 186

Query: 750 EG*CAS 755
           E *CAS
Sbjct: 187 E**CAS 204



 Score = 40.4 bits (93), Expect(2) = 6e-29
 Identities = 26/45 (57%), Positives = 31/45 (68%)
 Frame = +3

Query: 757 EITLWLRPDH*GLKVAK*RS*EARRYL**K*FGEEQLVRV*RGGL 801
           E TL  R   *GL + K*R *EARRYL *+ FG E++V+ *RG L
Sbjct: 207 ETTLR*RLYR*GLMIEK*RH*EARRYLL*ESFGTERMVKA*RGSL 341


>BG644693 weakly similar to GP|18767374|g Putative 22 kDa kafirin cluster;
           Ty3-Gypsy type {Oryza sativa}, partial (15%)
          Length = 716

 Score = 61.6 bits (148), Expect = 1e-09
 Identities = 36/88 (40%), Positives = 52/88 (58%), Gaps = 5/88 (5%)
 Frame = +2

Query: 18  AFRCYMNKIFHAYLDWFVVVFIDDILIYSRSEEEHAEHLKIMLQVLKEKKMYAKLSKCEF 77
           AF   MN++F  YLD  V+VF +DILIYS++E EH  HL++ L+VLK+      +  C+ 
Sbjct: 467 AFMELMNRVFQDYLDSLVIVFSNDILIYSKNENEHENHLRLALKVLKD------IGLCQI 628

Query: 78  ----WLSEVSFLG-HIISDSGIVVTHQK 100
                L EV F   H+IS  G+ V  ++
Sbjct: 629 SYV*ILVEVGFFSLHVISGEGLKVDSKR 712


>TC86737 weakly similar to GP|6683624|dbj|BAA89272.1 Pol {Alternaria
           alternata}, partial (21%)
          Length = 1540

 Score = 54.7 bits (130), Expect = 1e-07
 Identities = 26/73 (35%), Positives = 47/73 (63%), Gaps = 1/73 (1%)
 Frame = +1

Query: 19  FRCYMNKIFHAYLDWFVVVFIDDILIYSR-SEEEHAEHLKIMLQVLKEKKMYAKLSKCEF 77
           F+ Y+NK  H +LD FV  +IDD+LIY+  S+++H   ++ +L+ L +  +     KCEF
Sbjct: 862 FQRYINKTLHEFLDDFVTAYIDDVLIYTTGSKKDHEAQVRRVLRRLADAGLSLDPKKCEF 1041

Query: 78  WLSEVSFLGHIIS 90
            ++ V ++G I++
Sbjct: 1042SVTTVKYVGFILT 1080


>BG587145 similar to PIR|H86337|H8 protein F5M15.26 [imported] - Arabidopsis
           thaliana, partial (13%)
          Length = 763

 Score = 48.5 bits (114), Expect = 1e-05
 Identities = 27/90 (30%), Positives = 48/90 (53%)
 Frame = +2

Query: 12  LRIFSDAFRCYMNKIFHAYLDWFVVVFIDDILIYSRSEEEHAEHLKIMLQVLKEKKMYAK 71
           L+     ++  +N++F   L   + V+IDD+L+ S    +H  HLK   + L E  M   
Sbjct: 80  LKNAGSTYQRLVNRMFADKLGNTMEVYIDDMLVKSLRATDHLNHLKE*FKTLDEYIMKLN 259

Query: 72  LSKCEFWLSEVSFLGHIISDSGIVVTHQKL 101
            +KC F ++   FLG+I++  GI V  +++
Sbjct: 260 PAKCTFGVTSGEFLGYIVTQQGIEVNPKQI 349


>BG452991 PIR|A25875|A25 histone H4 - Tetrahymena thermophila, partial (33%)
          Length = 560

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 35/72 (48%), Positives = 41/72 (56%)
 Frame = +2

Query: 312 *TV*RLESSL*VVASECEVVYVEDQQ*ILEQY*RSAES*C*VCGLVGC**SN*RW*LQG* 371
           *TV RLE  L* VA+ECE+  VEDQQ I   Y R +E  C V       *S+*RW*   *
Sbjct: 71  *TVQRLEFGL*SVATECEIGDVEDQQRIFG*YQRGSEGGCEVGRFNVWE*SD*RW*F*S* 250

Query: 372 **RCVEIPRQNL 383
           * R V +   N+
Sbjct: 251 *SRSVAVSG*NM 286


>TC84979 
          Length = 641

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 14/16 (87%), Positives = 15/16 (93%)
 Frame = +2

Query: 801 LMSHLLLIFICFLV*F 816
           LMSHLL IFIC+LV*F
Sbjct: 494 LMSHLLSIFICYLV*F 541


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.372    0.167    0.652 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,785,925
Number of Sequences: 36976
Number of extensions: 353803
Number of successful extensions: 4623
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 956
Number of HSP's successfully gapped in prelim test: 138
Number of HSP's that attempted gapping in prelim test: 3605
Number of HSP's gapped (non-prelim): 1211
length of query: 818
length of database: 9,014,727
effective HSP length: 104
effective length of query: 714
effective length of database: 5,169,223
effective search space: 3690825222
effective search space used: 3690825222
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 14 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 36 (21.9 bits)
S2: 62 (28.5 bits)