BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146792.2 + phase: 0
(577 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC89964 weakly similar to PIR|B96639|B96639 protein T1F9.16 [imp... 467 e-132
TC90390 similar to GP|16209658|gb|AAL14389.1 At1g61350/T1F9_16 {... 189 4e-97
BQ149381 weakly similar to GP|16209658|gb At1g61350/T1F9_16 {Ara... 261 4e-70
TC89467 similar to GP|20258993|gb|AAM14212.1 unknown protein {Ar... 112 3e-25
BQ154698 weakly similar to GP|22122914|gb putative arm repeat co... 85 7e-17
TC88623 similar to PIR|C84609|C84609 hypothetical protein At2g22... 40 0.002
TC79478 similar to GP|18491179|gb|AAL69492.1 unknown protein {Ar... 39 0.007
BG581900 similar to PIR|T47846|T47 Arm repeat containing protein... 36 0.036
TC78014 similar to GP|17529090|gb|AAL38755.1 unknown protein {Ar... 35 0.061
TC83314 similar to GP|10177135|dbj|BAB10425. gene_id:K2A18.28~pi... 35 0.079
TC81430 weakly similar to GP|18491179|gb|AAL69492.1 unknown prot... 35 0.10
TC87277 similar to PIR|T45588|T45588 arm repeat containing prote... 35 0.10
AW690232 similar to GP|13752562|gb importin alpha 2 {Capsicum an... 33 0.23
TC77447 similar to GP|16974501|gb|AAL31160.1 AT3g06720/F3E22_14 ... 33 0.39
BG648375 weakly similar to PIR|T48624|T486 hypothetical protein ... 31 1.1
TC81640 similar to GP|15292863|gb|AAK92802.1 unknown protein {Ar... 31 1.1
TC84626 weakly similar to PIR|G96698|G96698 hypothetical protein... 31 1.5
TC85107 similar to PIR|C84609|C84609 hypothetical protein At2g22... 31 1.5
TC91980 similar to GP|8886935|gb|AAF80621.1| F2D10.27 {Arabidops... 30 2.5
TC91792 homologue to GP|13752562|gb|AAK38727.1 importin alpha 2 ... 30 3.3
>TC89964 weakly similar to PIR|B96639|B96639 protein T1F9.16 [imported] -
Arabidopsis thaliana, partial (35%)
Length = 928
Score = 467 bits (1201), Expect = e-132
Identities = 242/242 (100%), Positives = 242/242 (100%)
Frame = +1
Query: 336 KEEAIQVNSIGFIQNIAFGDELVRQMVIREGGIRALLRVLDPKWSYSSKTKEITMRAIES 395
KEEAIQVNSIGFIQNIAFGDELVRQMVIREGGIRALLRVLDPKWSYSSKTKEITMRAIES
Sbjct: 31 KEEAIQVNSIGFIQNIAFGDELVRQMVIREGGIRALLRVLDPKWSYSSKTKEITMRAIES 210
Query: 396 LCFTSSSSVSILMSYGFVDQLLYYVRHGEVSIQELALKVAFRLSGTSEEAKKAMGDAGFM 455
LCFTSSSSVSILMSYGFVDQLLYYVRHGEVSIQELALKVAFRLSGTSEEAKKAMGDAGFM
Sbjct: 211 LCFTSSSSVSILMSYGFVDQLLYYVRHGEVSIQELALKVAFRLSGTSEEAKKAMGDAGFM 390
Query: 456 VEFVKFLNAKSFEVREMAAEALSGMVTVPRNRKRFVQDDHNIALLLQLLDPEEGNSGNKK 515
VEFVKFLNAKSFEVREMAAEALSGMVTVPRNRKRFVQDDHNIALLLQLLDPEEGNSGNKK
Sbjct: 391 VEFVKFLNAKSFEVREMAAEALSGMVTVPRNRKRFVQDDHNIALLLQLLDPEEGNSGNKK 570
Query: 516 FLISILMSLTSCNSARKKIVSSGYAKNIDKLADAEVSCDAKKLVKKLSTNRFRSMLNGIW 575
FLISILMSLTSCNSARKKIVSSGYAKNIDKLADAEVSCDAKKLVKKLSTNRFRSMLNGIW
Sbjct: 571 FLISILMSLTSCNSARKKIVSSGYAKNIDKLADAEVSCDAKKLVKKLSTNRFRSMLNGIW 750
Query: 576 HS 577
HS
Sbjct: 751 HS 756
>TC90390 similar to GP|16209658|gb|AAL14389.1 At1g61350/T1F9_16 {Arabidopsis
thaliana}, partial (13%)
Length = 748
Score = 189 bits (479), Expect(3) = 4e-97
Identities = 95/95 (100%), Positives = 95/95 (100%)
Frame = +2
Query: 1 MGDEELTGESQLAGVPTGACRLRRALELICSLLSLTLSIRVFAGKWQLIRNKLEELHSGL 60
MGDEELTGESQLAGVPTGACRLRRALELICSLLSLTLSIRVFAGKWQLIRNKLEELHSGL
Sbjct: 146 MGDEELTGESQLAGVPTGACRLRRALELICSLLSLTLSIRVFAGKWQLIRNKLEELHSGL 325
Query: 61 IAAENSDSGENPSLSRLVTSIVATVKECHDLGQRC 95
IAAENSDSGENPSLSRLVTSIVATVKECHDLGQRC
Sbjct: 326 IAAENSDSGENPSLSRLVTSIVATVKECHDLGQRC 430
Score = 118 bits (295), Expect(3) = 4e-97
Identities = 60/65 (92%), Positives = 60/65 (92%)
Frame = +1
Query: 136 GFALVVSKPCLGACKEDMRFYVRDILTRMKIGELGMKKQALRNLLEVVVEDEKYVKVIVV 195
G VVSKPCLGACKEDMRFYVRDILTRMKIGELGMKKQALRNLL VVVEDEKYVK IVV
Sbjct: 553 GLRFVVSKPCLGACKEDMRFYVRDILTRMKIGELGMKKQALRNLLGVVVEDEKYVKGIVV 732
Query: 196 DVSDV 200
DVSDV
Sbjct: 733 DVSDV 747
Score = 88.2 bits (217), Expect(3) = 4e-97
Identities = 45/48 (93%), Positives = 45/48 (93%)
Frame = +3
Query: 96 VDFSYSGKLLMQSDLDVAFSKLDGLAKKLSEIYRTGILTNGFALVVSK 143
VDFSYSGKLLMQSDLDVAFSKLDGLAKKLSEIYRTGILTNGFAL K
Sbjct: 432 VDFSYSGKLLMQSDLDVAFSKLDGLAKKLSEIYRTGILTNGFALCCFK 575
>BQ149381 weakly similar to GP|16209658|gb At1g61350/T1F9_16 {Arabidopsis
thaliana}, partial (18%)
Length = 400
Score = 261 bits (668), Expect = 4e-70
Identities = 132/132 (100%), Positives = 132/132 (100%)
Frame = +3
Query: 190 VKVIVVDVSDVVHVLVGFLGSNEVEIQEESAKVVCVLAGFDSYKGVLISAGVIAPLIRVL 249
VKVIVVDVSDVVHVLVGFLGSNEVEIQEESAKVVCVLAGFDSYKGVLISAGVIAPLIRVL
Sbjct: 3 VKVIVVDVSDVVHVLVGFLGSNEVEIQEESAKVVCVLAGFDSYKGVLISAGVIAPLIRVL 182
Query: 250 DCGSELGKVAAARCLMKLTENSDNAWAVSAHGGVTALLNICGNDDCKGDLVGPACGVLRN 309
DCGSELGKVAAARCLMKLTENSDNAWAVSAHGGVTALLNICGNDDCKGDLVGPACGVLRN
Sbjct: 183 DCGSELGKVAAARCLMKLTENSDNAWAVSAHGGVTALLNICGNDDCKGDLVGPACGVLRN 362
Query: 310 LVGVEEVKRFMV 321
LVGVEEVKRFMV
Sbjct: 363 LVGVEEVKRFMV 398
>TC89467 similar to GP|20258993|gb|AAM14212.1 unknown protein {Arabidopsis
thaliana}, partial (41%)
Length = 1015
Score = 112 bits (281), Expect = 3e-25
Identities = 80/267 (29%), Positives = 134/267 (49%), Gaps = 7/267 (2%)
Frame = +3
Query: 22 LRRALELICSLLSLTLSIRVFAGKWQLIRNKLEELHSGLIAAENSDSGENPSLSR----- 76
L + EL+ L+ ++ F G+W++I +KLE++ S L SD +P S+
Sbjct: 156 LLNSQELVPIALTKAREVKGFQGRWKMIISKLEQVPSKL-----SDLSSHPCFSKNALCK 320
Query: 77 -LVTSIVATVKECHDLGQRCVDFSYSGKLLMQSDLDVAFSKLDGLAKKLSEIYRTGILTN 135
+ ++ T++E +L + C+ Y GKL MQSDLD KLD K S + +TG+L
Sbjct: 321 EQLQAVSKTLREGIELAELCLKEKYEGKLRMQSDLDALIGKLDLNLKDCSLLTKTGVLGE 500
Query: 136 GFALVVSKPCLGACKEDMRFYVRDILTRMKIGELGMKKQALRNLLEVVVEDEKYVKVIVV 195
+ + ++++L R++IG L K +AL L +++ EDEK V+ V
Sbjct: 501 VTLQFNVSGSITESDIETHCNIKELLARLQIGHLESKHKALDRLHDIMREDEK--NVLAV 674
Query: 196 DVSDVVHVLVGFLGSNEVEIQEESAKVVCVLA-GFDSYKGVLISAGVIAPLIRVLDCGSE 254
V LV L + I+E++ ++C L S + L++ GV+ PLIR+++ GS
Sbjct: 675 FCRSNVVALVQLLTATSTRIREKTVSIICSLVESGGSCESWLVAEGVLPPLIRLVESGSA 854
Query: 255 LGKVAAARCLMKLTENSDNAWAVSAHG 281
+ K A L +L+ D A+ HG
Sbjct: 855 VSKEKAIVSLQRLSMTEDTTRAIVGHG 935
>BQ154698 weakly similar to GP|22122914|gb putative arm repeat containing
protein {Oryza sativa (japonica cultivar-group)},
partial (26%)
Length = 656
Score = 85.1 bits (209), Expect = 7e-17
Identities = 49/153 (32%), Positives = 89/153 (58%)
Frame = +1
Query: 420 VRHGEVSIQELALKVAFRLSGTSEEAKKAMGDAGFMVEFVKFLNAKSFEVREMAAEALSG 479
++ G + ++ A V R+ +S E KK +G+ G + + L AK+ RE+AA+A++
Sbjct: 4 LKSGSLGAKQCAASVICRIC-SSIEMKKMLGEVGCIPLLINMLEAKANTARELAAQAIAS 180
Query: 480 MVTVPRNRKRFVQDDHNIALLLQLLDPEEGNSGNKKFLISILMSLTSCNSARKKIVSSGY 539
++ + +NR+ +DD ++ L+QLLDP N+ KK+ + L SL+SC ++ ++S G
Sbjct: 181 LMILSQNRREVKKDDKSVPNLVQLLDPSPQNTA-KKYAVCCLGSLSSCKKCKRLMISYGA 357
Query: 540 AKNIDKLADAEVSCDAKKLVKKLSTNRFRSMLN 572
+ KL D E+ AKKL ++L + RS+ +
Sbjct: 358 IGYLKKLIDIEIP-GAKKLRERLERGKLRSLFS 453
>TC88623 similar to PIR|C84609|C84609 hypothetical protein At2g22130
[imported] - Arabidopsis thaliana, partial (24%)
Length = 1960
Score = 40.0 bits (92), Expect = 0.002
Identities = 45/199 (22%), Positives = 87/199 (43%), Gaps = 2/199 (1%)
Frame = +3
Query: 200 VVHVLVGFLGSNEVEIQEESAKVVCVLAGFDSYKGVLISAGVIAPLIRVLDCGSELGKVA 259
V+ L+ L S +Q+ +A+++ L + + ++ VIAPLIR+L G L +
Sbjct: 51 VIEPLIPLLDSPISVVQQLAAELLSHLLLEEHLQKDPVTPKVIAPLIRILGSGIPLLQQR 230
Query: 260 AARCLMKLTENSDNAWAVSAHGGVTALLNIC--GNDDCKGDLVGPACGVLRNLVGVEEVK 317
A + L+ + N ++ GGV + + + L A VL +++ +
Sbjct: 231 ALKALVSIALTWPN--EIAKEGGVVEISRVILQADPSLPHALWESAASVLSSIL---QFS 395
Query: 318 RFMVEEDAVSTFIRLVKSKEEAIQVNSIGFIQNIAFGDELVRQMVIREGGIRALLRVLDP 377
E V+ +RL++S E+ + ++ + + D + + G I ALL +L
Sbjct: 396 SEFYLEVPVAVLVRLLRSGSESTVIGALNALLVLESDDGTSAEAMAESGAIEALLELL-- 569
Query: 378 KWSYSSKTKEITMRAIESL 396
S + +E R +E L
Sbjct: 570 ---RSHQCEETAARLLEVL 617
>TC79478 similar to GP|18491179|gb|AAL69492.1 unknown protein {Arabidopsis
thaliana}, partial (39%)
Length = 958
Score = 38.5 bits (88), Expect = 0.007
Identities = 38/139 (27%), Positives = 60/139 (42%), Gaps = 1/139 (0%)
Frame = +2
Query: 195 VDVSDVVHVLVGFLGSNEVEIQEESAKVVCVLAGFDS-YKGVLISAGVIAPLIRVLDCGS 253
V ++ + ++G L S E Q E+A ++ A DS K ++ G + PLI +L
Sbjct: 281 VILAGALQPVIGLLSSCCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQSSD 460
Query: 254 ELGKVAAARCLMKLTENSDNAWAVSAHGGVTALLNICGNDDCKGDLVGPACGVLRNLVGV 313
K +A L +L +++ N ++ GG+ LL + D G L A L L
Sbjct: 461 VQLKEMSAFALGRLAQDTHNQAGIAHSGGLVPLLKLL--DSKNGSLQHNAAFALYGLA-- 628
Query: 314 EEVKRFMVEEDAVSTFIRL 332
ED V FIR+
Sbjct: 629 -------ENEDNVPDFIRI 664
Score = 34.7 bits (78), Expect = 0.10
Identities = 25/83 (30%), Positives = 42/83 (50%)
Frame = +2
Query: 201 VHVLVGFLGSNEVEIQEESAKVVCVLAGFDSYKGVLISAGVIAPLIRVLDCGSELGKVAA 260
V L+ L S++V+++E SA + LA + + +G + PL+++LD + + A
Sbjct: 425 VRPLIEMLQSSDVQLKEMSAFALGRLAQDTHNQAGIAHSGGLVPLLKLLDSKNGSLQHNA 604
Query: 261 ARCLMKLTENSDNAWAVSAHGGV 283
A L L EN DN GG+
Sbjct: 605 AFALYGLAENEDNVPDFIRIGGI 673
>BG581900 similar to PIR|T47846|T47 Arm repeat containing protein-like -
Arabidopsis thaliana, partial (24%)
Length = 774
Score = 36.2 bits (82), Expect = 0.036
Identities = 29/127 (22%), Positives = 52/127 (40%)
Frame = +1
Query: 170 GMKKQALRNLLEVVVEDEKYVKVIVVDVSDVVHVLVGFLGSNEVEIQEESAKVVCVLAGF 229
G++++A L + +D + + L + +QE +A + L+
Sbjct: 121 GVRQEAAGALWNLSFDDRNREAIAAAGGVQALVTLAQSCSNASAGLQERAAGALWGLSVS 300
Query: 230 DSYKGVLISAGVIAPLIRVLDCGSELGKVAAARCLMKLTENSDNAWAVSAHGGVTALLNI 289
++ + G +APLI + +E AA L L N NA + GGV AL+ +
Sbjct: 301 EANSIAIGREGGVAPLIALARSEAEDVHETAAGALWNLAFNPGNALRIVEEGGVAALVEL 480
Query: 290 CGNDDCK 296
C + K
Sbjct: 481 CSSSVSK 501
>TC78014 similar to GP|17529090|gb|AAL38755.1 unknown protein {Arabidopsis
thaliana}, partial (74%)
Length = 2305
Score = 35.4 bits (80), Expect = 0.061
Identities = 26/106 (24%), Positives = 48/106 (44%), Gaps = 1/106 (0%)
Frame = +3
Query: 157 VRDILTRMKIGELGMKKQALRNLLEVVVEDEKYVKVIVVDVSDVVHVLVGFLGSNEVEIQ 216
+ DI+ +K G + ++ A L + V DE V + + + L+ L +
Sbjct: 1527 IPDIVDVLKNGSMEARENAAATLFSLSVLDENKV---AIGAAGAIPALIKLLCEGTPRGK 1697
Query: 217 EESAKVVCVLAGFDSYKGVLISAGVIAPLIRVL-DCGSELGKVAAA 261
+++A + L + K + AG++APLIR + D G + A A
Sbjct: 1698 KDAATAIFNLCIYQGNKARAVKAGIVAPLIRFMKDAGGGMVDEALA 1835
>TC83314 similar to GP|10177135|dbj|BAB10425.
gene_id:K2A18.28~pir||T10240~strong similarity to
unknown protein {Arabidopsis thaliana}, partial (26%)
Length = 956
Score = 35.0 bits (79), Expect = 0.079
Identities = 20/67 (29%), Positives = 37/67 (54%)
Frame = +3
Query: 207 FLGSNEVEIQEESAKVVCVLAGFDSYKGVLISAGVIAPLIRVLDCGSELGKVAAARCLMK 266
F GS EV + +A +V + G D Y ++I G + PL++++ G G+ AAR +
Sbjct: 129 FTGSQEVR-SDAAASLVSLARGSDRYGKLIIEEGGVGPLLKLIKEGKADGQENAARAIGL 305
Query: 267 LTENSDN 273
L ++++
Sbjct: 306 LGRDAES 326
>TC81430 weakly similar to GP|18491179|gb|AAL69492.1 unknown protein
{Arabidopsis thaliana}, partial (49%)
Length = 1491
Score = 34.7 bits (78), Expect = 0.10
Identities = 27/86 (31%), Positives = 41/86 (47%)
Frame = +2
Query: 201 VHVLVGFLGSNEVEIQEESAKVVCVLAGFDSYKGVLISAGVIAPLIRVLDCGSELGKVAA 260
V L+ L S +V+++E SA + LA + + G + PL+++LD + + A
Sbjct: 68 VRPLIEMLSSPDVQLREMSAFALGRLAQDTHNQAGIAHNGGLVPLLKLLDSKNGSLQHNA 247
Query: 261 ARCLMKLTENSDNAWAVSAHGGVTAL 286
A L L EN DN GGV L
Sbjct: 248 AFALYGLAENEDNVSYFIRVGGVQRL 325
Score = 30.8 bits (68), Expect = 1.5
Identities = 26/97 (26%), Positives = 42/97 (42%)
Frame = +2
Query: 236 LISAGVIAPLIRVLDCGSELGKVAAARCLMKLTENSDNAWAVSAHGGVTALLNICGNDDC 295
++ G + PLI +L + +A L +L +++ N ++ +GG+ LL + D
Sbjct: 50 IVQRGAVRPLIEMLSSPDVQLREMSAFALGRLAQDTHNQAGIAHNGGLVPLLKLL--DSK 223
Query: 296 KGDLVGPACGVLRNLVGVEEVKRFMVEEDAVSTFIRL 332
G L A L L ED VS FIR+
Sbjct: 224 NGSLQHNAAFALYGLA---------ENEDNVSYFIRV 307
>TC87277 similar to PIR|T45588|T45588 arm repeat containing protein homolog
- Arabidopsis thaliana, partial (48%)
Length = 1393
Score = 34.7 bits (78), Expect = 0.10
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Frame = +1
Query: 195 VDVSDVVHVLVGFLGSNEVEIQEESAKVVCVLAGFD-SYKGVLISAGVIAPLIRVLDCGS 253
+ ++ V VLV F+G+ +E +A V+ L D Y GV+APL+ + G+
Sbjct: 751 IGAAEAVPVLVKFIGNGSPRNKENAAAVLVHLCSGDRQYIAQAQELGVMAPLLELAQNGT 930
Query: 254 ELGKVAAARCLMKLT 268
+ GK A + + +++
Sbjct: 931 DRGKRKATQLIERMS 975
>AW690232 similar to GP|13752562|gb importin alpha 2 {Capsicum annuum},
partial (30%)
Length = 481
Score = 33.5 bits (75), Expect = 0.23
Identities = 28/85 (32%), Positives = 42/85 (48%), Gaps = 4/85 (4%)
Frame = +2
Query: 429 ELALKVAFRLS----GTSEEAKKAMGDAGFMVEFVKFLNAKSFEVREMAAEALSGMVTVP 484
+L L+ A+ L+ GTSE K + D G + FVK L++ +VR AA AL +
Sbjct: 38 QLQLEAAWALTNIAAGTSENTKVVV-DHGAVPMFVKLLSSPCDDVRGQAAWALGNIAGDS 214
Query: 485 RNRKRFVQDDHNIALLLQLLDPEEG 509
+ V + LLL L+ +EG
Sbjct: 215 PRGRDLVLSHGALILLLSQLNEQEG 289
>TC77447 similar to GP|16974501|gb|AAL31160.1 AT3g06720/F3E22_14
{Arabidopsis thaliana}, partial (96%)
Length = 2271
Score = 32.7 bits (73), Expect = 0.39
Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 5/122 (4%)
Frame = +2
Query: 387 EITMRAIESLCFTSSSSVSILMSYGFVDQLLYYVRHGEVSIQELALKVAFRL----SGTS 442
E T + + L S + ++ G V + + ++ + +L + A+ L SGTS
Sbjct: 380 EATTQFRKLLSIERSPPIEEVIQAGVVPRFIEFLMRED--FPQLQFEAAWALTNIASGTS 553
Query: 443 EEAKKAMGDAGFMVEFVKFLNAKSFEVREMAAEALSGMV-TVPRNRKRFVQDDHNIALLL 501
E K + +AG + FVK L + S +VRE A AL + PR R + + LL
Sbjct: 554 ENTKVVI-EAGAVPIFVKLLASPSDDVREQAVWALGNVAGDSPRCRDLVLGHGALLPLLA 730
Query: 502 QL 503
QL
Sbjct: 731 QL 736
>BG648375 weakly similar to PIR|T48624|T486 hypothetical protein F18O22.300 -
Arabidopsis thaliana, partial (19%)
Length = 796
Score = 31.2 bits (69), Expect = 1.1
Identities = 34/152 (22%), Positives = 64/152 (41%)
Frame = +2
Query: 387 EITMRAIESLCFTSSSSVSILMSYGFVDQLLYYVRHGEVSIQELALKVAFRLSGTSEEAK 446
E ++A L S+ L G + L+ + E +L LS SE K
Sbjct: 29 EAQIQAAMKLSRLSNKQKHNLAESGVMVPLVSMLHSQNFEAIEASLCAFLSLSFGSERNK 208
Query: 447 KAMGDAGFMVEFVKFLNAKSFEVREMAAEALSGMVTVPRNRKRFVQDDHNIALLLQLLDP 506
+ G + + L+ +S V +++ A+ + + RN K + + +L++L++
Sbjct: 209 IRIVRYGVLPILLNLLHCESQTVIQLSVAAMLTLSSCKRN-KVAIASSGAVQILVELINN 385
Query: 507 EEGNSGNKKFLISILMSLTSCNSARKKIVSSG 538
+ ++ I+ L +LTSC I SSG
Sbjct: 386 SNIETQSQLDTIATLHNLTSCQEIIPLIASSG 481
>TC81640 similar to GP|15292863|gb|AAK92802.1 unknown protein {Arabidopsis
thaliana}, partial (40%)
Length = 810
Score = 31.2 bits (69), Expect = 1.1
Identities = 32/142 (22%), Positives = 60/142 (41%), Gaps = 1/142 (0%)
Frame = +2
Query: 157 VRDILTRMKIGELGMKKQALRNLLEVVVEDEKYVKVIVVDVSDVVHVLVGFLGSNEVEIQ 216
V+ ++ +K G K+ A LL + + +E + S + LV L + +
Sbjct: 56 VKSLIYVLKTGTETSKQNAACALLSLALVEENKSSI---GASGAIPPLVSLLLNGSNRGK 226
Query: 217 EESAKVVCVLAGFDSYKGVLISAGVIAPLIR-VLDCGSELGKVAAARCLMKLTENSDNAW 275
+++ + L K +SAGV+ PL+ V + G+ + + A L L +
Sbjct: 227 KDALTTLYKLCSVKQNKERAVSAGVVKPLVELVAEQGNGMMEKAMV-VLNSLAGFDEGKE 403
Query: 276 AVSAHGGVTALLNICGNDDCKG 297
A+ GG+ AL+ + KG
Sbjct: 404 AIVEEGGIAALVEAIEDGSVKG 469
>TC84626 weakly similar to PIR|G96698|G96698 hypothetical protein F12B7.8
[imported] - Arabidopsis thaliana, partial (18%)
Length = 720
Score = 30.8 bits (68), Expect = 1.5
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Frame = +1
Query: 208 LGSNEVEIQEESAKVVCVLA-GFDSYKGVLISAGVIAPLIRVLDCGSELGKVAAARCLMK 266
+G E E+ V+ LA + + ++++ +I+ L +LD G + + A CL+
Sbjct: 157 VGQAECSWTEKCIAVLVNLAVSHEGREEMMLNPELISTLASILDTGESIEQEQAVSCLLI 336
Query: 267 LTENSDNAW-AVSAHGGVTALLNICGNDDCKG 297
L S+ V G + AL++I N +G
Sbjct: 337 LCNRSEKCCEMVLQEGAIPALVSITVNGTSRG 432
>TC85107 similar to PIR|C84609|C84609 hypothetical protein At2g22130
[imported] - Arabidopsis thaliana, partial (10%)
Length = 663
Score = 30.8 bits (68), Expect = 1.5
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 3/121 (2%)
Frame = +3
Query: 219 SAKVVCVLAGFDSYKGVLISAGVIAPLIRVLDCGSELGKVAAARCLM-KLTENSDNAWAV 277
+AK + L D + I+ + PL+ +L+ GSE + AA L+ L+EN A AV
Sbjct: 219 AAKALESLFSADHIRNADIARQAVQPLVEILNTGSEREQHAAIAALVGLLSENPSRALAV 398
Query: 278 S--AHGGVTALLNICGNDDCKGDLVGPACGVLRNLVGVEEVKRFMVEEDAVSTFIRLVKS 335
+ V L I + +C DL A + L G ++ V + L+ +
Sbjct: 399 ADVEMNAVDVLYRIL-SSNCSMDLKRDAAELCCALFGNTRIRSTAAAARCVEPLVSLLAT 575
Query: 336 K 336
+
Sbjct: 576 E 578
Score = 28.5 bits (62), Expect = 7.4
Identities = 22/114 (19%), Positives = 50/114 (43%), Gaps = 1/114 (0%)
Frame = +3
Query: 157 VRDILTRMKIGELGMKKQALRNLLEVVVEDEKYVKVIVVDVSDVVHVLVGFLGSN-EVEI 215
V+ ++ + G + A+ L+ ++ E+ + + V VL L SN +++
Sbjct: 288 VQPLVEILNTGSEREQHAAIAALVGLLSENPSRALAVADVEMNAVDVLYRILSSNCSMDL 467
Query: 216 QEESAKVVCVLAGFDSYKGVLISAGVIAPLIRVLDCGSELGKVAAARCLMKLTE 269
+ ++A++ C L G + +A + PL+ +L + R L +L +
Sbjct: 468 KRDAAELCCALFGNTRIRSTAAAARCVEPLVSLLATEFSPAHHSXXRALDRLVD 629
>TC91980 similar to GP|8886935|gb|AAF80621.1| F2D10.27 {Arabidopsis
thaliana}, partial (32%)
Length = 901
Score = 30.0 bits (66), Expect = 2.5
Identities = 43/195 (22%), Positives = 84/195 (43%), Gaps = 25/195 (12%)
Frame = +1
Query: 190 VKVIVVDVSDVVHVLVGFLGSNEVEIQEESAKVVCVLAGFDSYKGVLISAGVIAPLIRVL 249
VKV+V V L+ + S ++ +E + K + ++ + VLI AG++ PL+ L
Sbjct: 16 VKVLVART--VGSSLIDIMKSGNMQSREAALKALNQISSCEPSAKVLIEAGILLPLVNDL 189
Query: 250 DC------GSELGKVAAARCLMKLTENSD--------NAWAVSAHGGVTALLNICGNDDC 295
+ L +V+A + D + + + V LL++ N
Sbjct: 190 FAVGPHLLPTRLKEVSATILASVVNSGEDFDSIPLGPDHQTLVSEDIVHKLLHLISN--- 360
Query: 296 KGDLVGPA--CGVLRNLVG-------VEEVKRFMVEEDAVSTFIRLVKSKEEAIQVNSIG 346
GPA C +L+ LVG V + + A + ++ +++ ++ +++ SI
Sbjct: 361 ----TGPAIECKLLQVLVGLASSPTTVLSLVSAIKSSGATISLVQFIEAPQKDLRLASIK 528
Query: 347 FIQNIA--FGDELVR 359
+QN++ G EL R
Sbjct: 529 LLQNLSPHMGPELAR 573
>TC91792 homologue to GP|13752562|gb|AAK38727.1 importin alpha 2 {Capsicum
annuum}, partial (34%)
Length = 655
Score = 29.6 bits (65), Expect = 3.3
Identities = 19/42 (45%), Positives = 24/42 (56%)
Frame = +2
Query: 439 SGTSEEAKKAMGDAGFMVEFVKFLNAKSFEVREMAAEALSGM 480
SGTSE K + D G + FVK L + S +VRE A AL +
Sbjct: 527 SGTSENTKVVI-DHGAVPIFVKLLXSPSDDVREQAVWALGNV 649
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.320 0.136 0.380
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,093,911
Number of Sequences: 36976
Number of extensions: 181692
Number of successful extensions: 916
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 905
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 913
length of query: 577
length of database: 9,014,727
effective HSP length: 101
effective length of query: 476
effective length of database: 5,280,151
effective search space: 2513351876
effective search space used: 2513351876
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Medicago: description of AC146792.2