Medicago
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146791.3 - phase: 0 /pseudo
         (400 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC78983 homologue to GP|4902849|emb|CAB43599.1 phosphoribosyl py...   234  e-101
TC93220 homologue to PIR|S71262|S71262 ribose-phosphate pyrophos...   229  4e-81
TC81682 similar to GP|4902851|emb|CAB43600.1 phosphoribosyl pyro...   111  3e-52
TC88806 similar to PIR|T52589|T52589 ribose-phosphate pyrophosph...    61  9e-10
AW586370 similar to GP|22208296|emb AGPRS2 {Eremothecium gossypi...    50  2e-06
BE322861 homologue to GP|4902849|emb| phosphoribosyl pyrophospha...    44  1e-04
TC89668 homologue to GP|4902849|emb|CAB43599.1 phosphoribosyl py...    43  2e-04
TC90584 similar to GP|22136810|gb|AAM91749.1 unknown protein {Ar...    37  0.018
TC85442 similar to GP|13543783|gb|AAH06040.1 Unknown (protein fo...    36  0.030
AW690594 similar to GP|23498163|emb hypothetical protein {Plasmo...    36  0.030
BF003792 similar to PIR|T52589|T525 ribose-phosphate pyrophospho...    36  0.030
AL389512 similar to GP|23510685|emb hypothetical protein {Plasmo...    35  0.051
TC84066 similar to GP|23498475|emb|CAD50426. ribonuclease  putat...    34  0.087
TC80941 weakly similar to PIR|T39903|T39903 serine-rich protein ...    33  0.25
TC88390 similar to GP|13272457|gb|AAK17167.1 unknown protein {Ar...    32  0.33
TC81158 similar to GP|9280664|gb|AAF86533.1| F21B7.15 {Arabidops...    32  0.33
TC78099 MtN30                                                          32  0.43
BQ137242 similar to GP|9800281|gb|A pR69 {rat cytomegalovirus Ma...    31  0.74
TC83341 weakly similar to GP|8978076|dbj|BAA98104.1 gene_id:K14A...    31  0.74
BE316406 similar to PIR|F71619|F716 hypothetical protein PFB0235...    31  0.97

>TC78983 homologue to GP|4902849|emb|CAB43599.1 phosphoribosyl pyrophosphate
           synthase {Spinacia oleracea}, partial (74%)
          Length = 1063

 Score =  234 bits (597), Expect(2) = e-101
 Identities = 115/126 (91%), Positives = 123/126 (97%)
 Frame = +1

Query: 134 VYVQLQESVRGCNVYLIQPTCPPANENLMELQVMIDACRRASAKNITAVIPYFGYARADR 193
           +YVQLQESVRGC+V+L+QPTCPPANENLMEL VMIDACRRASAKNITAVIPYFGYARADR
Sbjct: 418 IYVQLQESVRGCDVFLVQPTCPPANENLMELLVMIDACRRASAKNITAVIPYFGYARADR 597

Query: 194 KTQGRESIAAKLVANLITKAGADRVLACDLHSGQSMGYFDIPVDHVHCQPVILDYLASKT 253
           KTQGRESIAAKLVANLIT+AGA+RVLACDLHSGQSMGYFDIPVDHV+ QPVILDYLASKT
Sbjct: 598 KTQGRESIAAKLVANLITEAGANRVLACDLHSGQSMGYFDIPVDHVYGQPVILDYLASKT 777

Query: 254 ISSNDL 259
           I S+DL
Sbjct: 778 ICSDDL 795



 Score =  153 bits (386), Expect(2) = e-101
 Identities = 77/82 (93%), Positives = 79/82 (95%)
 Frame = +3

Query: 266 VGGVARARAFAKKLSDAPLAIVDKRRSGHNVAEVMNLIGDVKGKVAVMVDDMIDTAGTIA 325
           +GGVARARAFAKKLSDAPLAIVDKRR GHNVAEVMNLIGDVKGKVAVMVDDMIDTAGTIA
Sbjct: 816 LGGVARARAFAKKLSDAPLAIVDKRRHGHNVAEVMNLIGDVKGKVAVMVDDMIDTAGTIA 995

Query: 326 KGAALLHEEGAREVYACCTHGV 347
           KGAALLH+EGAREVYAC TH V
Sbjct: 996 KGAALLHQEGAREVYACTTHAV 1061


>TC93220 homologue to PIR|S71262|S71262 ribose-phosphate pyrophosphokinase
           (EC 2.7.6.1) isoform II [validated] - Arabidopsis
           thaliana, partial (55%)
          Length = 667

 Score =  229 bits (584), Expect(2) = 4e-81
 Identities = 115/116 (99%), Positives = 116/116 (99%)
 Frame = +1

Query: 234 IPVDHVHCQPVILDYLASKTISSNDLVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRSG 293
           IPVDHVHCQPVILDYLASKTISSN+LVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRSG
Sbjct: 1   IPVDHVHCQPVILDYLASKTISSNNLVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRSG 180

Query: 294 HNVAEVMNLIGDVKGKVAVMVDDMIDTAGTIAKGAALLHEEGAREVYACCTHGVFS 349
           HNVAEVMNLIGDVKGKVAVMVDDMIDTAGTIAKGAALLHEEGAREVYACCTHGVFS
Sbjct: 181 HNVAEVMNLIGDVKGKVAVMVDDMIDTAGTIAKGAALLHEEGAREVYACCTHGVFS 348



 Score = 90.5 bits (223), Expect(2) = 4e-81
 Identities = 41/41 (100%), Positives = 41/41 (100%)
 Frame = +3

Query: 360 PSCNREAVQRLISRGDNHEHYSGSREELFPPVNYSYRSKPV 400
           PSCNREAVQRLISRGDNHEHYSGSREELFPPVNYSYRSKPV
Sbjct: 348 PSCNREAVQRLISRGDNHEHYSGSREELFPPVNYSYRSKPV 470


>TC81682 similar to GP|4902851|emb|CAB43600.1 phosphoribosyl pyrophosphate
           synthase isozyme 2 {Spinacia oleracea}, partial (32%)
          Length = 781

 Score =  111 bits (278), Expect(3) = 3e-52
 Identities = 70/111 (63%), Positives = 74/111 (66%), Gaps = 10/111 (9%)
 Frame = +3

Query: 33  FPTL-GFVDLSRSRTVAYNTVVITFFLFFILLCFIFVFFFTFF---------IFLLEM*Y 82
           FP+  GFV LS S     N    +FF FF  L +       F          +   EM*Y
Sbjct: 192 FPSANGFVPLSTSTHFLINHAFCSFFFFFRRLSWPHFSNIRFC*PFSLSNRRV*YSEM*Y 371

Query: 83  VGSIKCC*RKTDCSRYQ*TNTAQVHGI*ENR**KR*QVEIVLRHR*SCSVP 133
           VGSIKCC*RKTDCSRYQ*TNTAQVHGI*ENR**KR*QVEIVLRHR*SCSVP
Sbjct: 372 VGSIKCC*RKTDCSRYQ*TNTAQVHGI*ENR**KR*QVEIVLRHR*SCSVP 524



 Score =  105 bits (262), Expect = 3e-23
 Identities = 52/52 (100%), Positives = 52/52 (100%)
 Frame = +1

Query: 1   MASSLFQLQHTSSSTMPFAPSSFFSGVSHGLTFPTLGFVDLSRSRTVAYNTV 52
           MASSLFQLQHTSSSTMPFAPSSFFSGVSHGLTFPTLGFVDLSRSRTVAYNTV
Sbjct: 205 MASSLFQLQHTSSSTMPFAPSSFFSGVSHGLTFPTLGFVDLSRSRTVAYNTV 360



 Score = 91.3 bits (225), Expect(3) = 3e-52
 Identities = 42/44 (95%), Positives = 43/44 (97%)
 Frame = +1

Query: 134 VYVQLQESVRGCNVYLIQPTCPPANENLMELQVMIDACRRASAK 177
           +YVQLQESVRGCNVYLIQPTCPPANENLMELQVMIDACRRAS K
Sbjct: 592 IYVQLQESVRGCNVYLIQPTCPPANENLMELQVMIDACRRASGK 723



 Score = 41.6 bits (96), Expect(3) = 3e-52
 Identities = 19/21 (90%), Positives = 19/21 (90%)
 Frame = +2

Query: 176 AKNITAVIPYFGYARADRKTQ 196
           AKNITAVIPYFGYA AD KTQ
Sbjct: 719 AKNITAVIPYFGYAXADXKTQ 781


>TC88806 similar to PIR|T52589|T52589 ribose-phosphate pyrophosphokinase (EC
           2.7.6.1) [imported] - Arabidopsis thaliana, partial
           (85%)
          Length = 1226

 Score = 60.8 bits (146), Expect = 9e-10
 Identities = 58/222 (26%), Positives = 106/222 (47%), Gaps = 7/222 (3%)
 Frame = +2

Query: 134 VYVQLQESVRGCNVYLIQPTCPPANENLMELQVMIDACRRASAKNITAVIPYFGYARADR 193
           +++   E +RG +V  +     PA   + E   +I A  R    + T V+P+F     +R
Sbjct: 167 IFINNAEELRGQHVAFLASFSSPAQ--VFEQLSVIYALPRLFVASFTLVLPFFPTGSFER 340

Query: 194 -KTQGRESIA---AKLVANL-ITKAGADRVLACDLHSGQSMGYFDIPVDHVHCQPV-ILD 247
            + +G  + A   A++++N+ I++ G   ++  D+H+ Q   YF   V  +    + +L 
Sbjct: 341 MEEEGDVATAFTLARMLSNIPISRGGPTSIVIYDIHALQERFYFGDEVLPLFETGIPLLK 520

Query: 248 YLASKTISSNDLVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRSGHNVAEVMNLI-GDV 306
               +   ++++V+  PD G   R   F K   +  + +  K R G     ++ L  G V
Sbjct: 521 QRLLQLPDADNVVIAFPDDGAWKR---FHKLFDNYSVVVCTKVREGDK--RIVRLKEGHV 685

Query: 307 KGKVAVMVDDMIDTAGTIAKGAALLHEEGAREVYACCTHGVF 348
            G   V+VDD++ + GT+ +   +L   GA +V A  THGVF
Sbjct: 686 SGHHVVIVDDLVQSGGTLIECQKVLAANGAGKVSAYVTHGVF 811


>AW586370 similar to GP|22208296|emb AGPRS2 {Eremothecium gossypii}, partial
           (14%)
          Length = 645

 Score = 50.1 bits (118), Expect = 2e-06
 Identities = 26/56 (46%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
 Frame = -1

Query: 295 NVAEVMNLIGDVKGKVAVMVDDMIDTAGT-IAKGAALLHEEGAREVYACCTHGVFS 349
           N +  + L+GDV GKV  +VDDMID AG+ IA    L+    A+ VY   THG+ S
Sbjct: 564 NCSNTITLVGDVAGKVTFIVDDMIDKAGSFIAAADHLMKRCNAKRVYVISTHGILS 397


>BE322861 homologue to GP|4902849|emb| phosphoribosyl pyrophosphate synthase
           {Spinacia oleracea}, partial (22%)
          Length = 481

 Score = 43.5 bits (101), Expect = 1e-04
 Identities = 31/64 (48%), Positives = 32/64 (49%), Gaps = 1/64 (1%)
 Frame = +3

Query: 134 VYVQLQESVRGCNVYLIQPTCPPANENLMELQVMIDACRRASAKNITAV-IPYFGYARAD 192
           +YVQLQESVRG                            RASAKNITA   P FGYARAD
Sbjct: 354 IYVQLQESVRG----------------------------RASAKNITAGHSPIFGYARAD 449

Query: 193 RKTQ 196
           RKTQ
Sbjct: 450 RKTQ 461


>TC89668 homologue to GP|4902849|emb|CAB43599.1 phosphoribosyl pyrophosphate
           synthase {Spinacia oleracea}, partial (19%)
          Length = 977

 Score = 43.1 bits (100), Expect = 2e-04
 Identities = 20/41 (48%), Positives = 27/41 (65%)
 Frame = +1

Query: 359 QPSCNREAVQRLISRGDNHEHYSGSREELFPPVNYSYRSKP 399
           QP+C RE V+  ISR +++ + S  REEL PP+N    SKP
Sbjct: 25  QPACYREIVKWFISRSEHN*YNSSGREELLPPINCLISSKP 147


>TC90584 similar to GP|22136810|gb|AAM91749.1 unknown protein {Arabidopsis
           thaliana}, partial (18%)
          Length = 686

 Score = 36.6 bits (83), Expect = 0.018
 Identities = 15/24 (62%), Positives = 18/24 (74%)
 Frame = +2

Query: 56  FFLFFILLCFIFVFFFTFFIFLLE 79
           FF+FF L CFIF+FFF F  F L+
Sbjct: 107 FFVFFFLRCFIFLFFFIFRSFFLQ 178


>TC85442 similar to GP|13543783|gb|AAH06040.1 Unknown (protein for MGC:7642)
           {Mus musculus}, partial (62%)
          Length = 585

 Score = 35.8 bits (81), Expect = 0.030
 Identities = 15/37 (40%), Positives = 23/37 (61%)
 Frame = -2

Query: 52  VVITFFLFFILLCFIFVFFFTFFIFLLEM*YVGSIKC 88
           ++  FFL F LLCF F+FFF  + F L + ++  + C
Sbjct: 164 LLFPFFLLFFLLCFFFLFFFFLWFFFLWLFFLLWLLC 54



 Score = 29.6 bits (65), Expect = 2.2
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = -2

Query: 54  ITFFLFFILLCFIFVFFFTFFIFL 77
           I  +LF  LL F+F FFF  F+FL
Sbjct: 257 IRCWLFLFLLFFLFPFFFLLFLFL 186



 Score = 28.9 bits (63), Expect = 3.7
 Identities = 13/25 (52%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
 Frame = -2

Query: 54  ITFFLF-FILLCFIFVFFFTFFIFL 77
           + FFLF F  L F+F+FFF +F  L
Sbjct: 233 LLFFLFPFFFLLFLFLFFFLWFFLL 159


>AW690594 similar to GP|23498163|emb hypothetical protein {Plasmodium
           falciparum 3D7}, partial (10%)
          Length = 633

 Score = 35.8 bits (81), Expect = 0.030
 Identities = 15/25 (60%), Positives = 17/25 (68%)
 Frame = -2

Query: 56  FFLFFILLCFIFVFFFTFFIFLLEM 80
           FF FF ++ FIF FFF FF F L M
Sbjct: 197 FFFFFFVIMFIFFFFFFFFFFFLIM 123



 Score = 33.9 bits (76), Expect = 0.11
 Identities = 14/27 (51%), Positives = 19/27 (69%)
 Frame = -2

Query: 54  ITFFLFFILLCFIFVFFFTFFIFLLEM 80
           +  F+FF L+ FIF FF+  F+FLL M
Sbjct: 131 LIMFIFFFLVMFIFFFFYFTFVFLLIM 51



 Score = 32.0 bits (71), Expect = 0.43
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -2

Query: 43  RSRTVAYNTVVITFFLFFILLCFIFVFFFTFFIFL 77
           R      + ++  FF+  +LL F F FFF FF+ +
Sbjct: 275 RQSAYPVDLILFPFFIIILLLLFFFFFFFFFFVIM 171



 Score = 28.5 bits (62), Expect = 4.8
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -2

Query: 52  VVITFFLFFILLCFIFVFFFTFFIFLLEM 80
           V +  F FFI++  +  FFF FF F + M
Sbjct: 257 VDLILFPFFIIILLLLFFFFFFFFFFVIM 171


>BF003792 similar to PIR|T52589|T525 ribose-phosphate pyrophosphokinase (EC
           2.7.6.1) [imported] - Arabidopsis thaliana, partial
           (22%)
          Length = 556

 Score = 35.8 bits (81), Expect = 0.030
 Identities = 17/41 (41%), Positives = 25/41 (60%)
 Frame = +3

Query: 308 GKVAVMVDDMIDTAGTIAKGAALLHEEGAREVYACCTHGVF 348
           G   V+VDD++ + GT+ +   +L   GA +V A  THGVF
Sbjct: 318 GHHVVIVDDLVQSGGTLIECQKVLAANGAAKVSAYVTHGVF 440


>AL389512 similar to GP|23510685|emb hypothetical protein {Plasmodium
           falciparum 3D7}, partial (1%)
          Length = 461

 Score = 35.0 bits (79), Expect = 0.051
 Identities = 23/50 (46%), Positives = 28/50 (56%), Gaps = 6/50 (12%)
 Frame = +1

Query: 34  PTLGFVDLSRSRTVAYNTVVIT------FFLFFILLCFIFVFFFTFFIFL 77
           PT G  ++S S T  YNT  IT      FF FF L  FIF+ F+ FFI +
Sbjct: 235 PT*GNYNVSIS*THNYNTYTITLFPYHQFFPFFFL--FIFILFYLFFILI 378


>TC84066 similar to GP|23498475|emb|CAD50426. ribonuclease  putative
           {Plasmodium falciparum 3D7}, partial (0%)
          Length = 481

 Score = 34.3 bits (77), Expect = 0.087
 Identities = 20/50 (40%), Positives = 24/50 (48%)
 Frame = -3

Query: 40  DLSRSRTVAYNTVVITFFLFFILLCFIFVFFFTFFIFLLEM*YVGSIKCC 89
           +L    T A N VVI F  FF L  F   F+F+F I  L    V +  CC
Sbjct: 194 ELKMEATGAGNIVVIIFSFFFFLCIFFSRFYFSFLICSLNCCEVLNFICC 45


>TC80941 weakly similar to PIR|T39903|T39903 serine-rich protein - fission
           yeast (Schizosaccharomyces pombe), partial (15%)
          Length = 557

 Score = 32.7 bits (73), Expect = 0.25
 Identities = 31/89 (34%), Positives = 40/89 (44%), Gaps = 11/89 (12%)
 Frame = -2

Query: 1   MASSLFQLQHTSSSTMPFAPSSFFSGVSHGL--TFPTLG------FVDLSRSRTVAYNTV 52
           M+SS F L  T S T+  + SSF S  S     TF TLG      F++      +    +
Sbjct: 466 MSSSSF-LSSTGSFTLSTSISSFTSSTSLSFFSTFTTLGLIFFF*FINSILVGLLLLLRL 290

Query: 53  VITFFLF---FILLCFIFVFFFTFFIFLL 78
             +F LF   F+LLC  F F      FLL
Sbjct: 289 CFSFLLFIALFLLLCLFFRFLIVITFFLL 203



 Score = 29.6 bits (65), Expect = 2.2
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -2

Query: 52  VVITFFLFFILLCFIFVFFFTFFIFL 77
           ++  FFL    LCF F F+F  F F+
Sbjct: 181 IITLFFLLNATLCFFFSFYFFLFFFI 104


>TC88390 similar to GP|13272457|gb|AAK17167.1 unknown protein {Arabidopsis
           thaliana}, partial (11%)
          Length = 976

 Score = 32.3 bits (72), Expect = 0.33
 Identities = 14/29 (48%), Positives = 19/29 (65%)
 Frame = -1

Query: 53  VITFFLFFILLCFIFVFFFTFFIFLLEM* 81
           +I  F+FF  L FIFVF F F +F  ++*
Sbjct: 229 LIIIFIFFFYLVFIFVFVFDFLVFNFKL* 143


>TC81158 similar to GP|9280664|gb|AAF86533.1| F21B7.15 {Arabidopsis
           thaliana}, partial (6%)
          Length = 890

 Score = 32.3 bits (72), Expect = 0.33
 Identities = 12/34 (35%), Positives = 22/34 (64%)
 Frame = -3

Query: 39  VDLSRSRTVAYNTVVITFFLFFILLCFIFVFFFT 72
           + ++ SRT + + ++IT+  FF + C +FV F T
Sbjct: 603 IKITISRTPSNHLLIITYLPFFFIFCIVFVVFIT 502


>TC78099 MtN30
          Length = 1025

 Score = 32.0 bits (71), Expect = 0.43
 Identities = 15/36 (41%), Positives = 20/36 (54%)
 Frame = +2

Query: 308 GKVAVMVDDMIDTAGTIAKGAALLHEEGAREVYACC 343
           G+ A++VDD+I T GT+     LL   GA  V   C
Sbjct: 521 GERAIVVDDLIATGGTLGAAMNLLERVGAEVVECAC 628


>BQ137242 similar to GP|9800281|gb|A pR69 {rat cytomegalovirus Maastricht},
           partial (2%)
          Length = 1023

 Score = 31.2 bits (69), Expect = 0.74
 Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
 Frame = -1

Query: 7   QLQHTSSSTMPFAPSSFFSGVSHGLTFPTLGFVDLSRSR-TVAYNTVVITFFLFFILLCF 65
           +LQ  S  ++ F PS  +S     L  P    + L+  R +  Y   +   FLFF+ LCF
Sbjct: 354 ELQILSL*SLLFCPSHHYSPKRTALCLPRPLPLSLTAGRGSFCYRPSLP--FLFFLSLCF 181

Query: 66  IFVFFFTFF 74
             VFF  FF
Sbjct: 180 FGVFFCVFF 154



 Score = 30.4 bits (67), Expect = 1.3
 Identities = 17/37 (45%), Positives = 23/37 (61%), Gaps = 5/37 (13%)
 Frame = -3

Query: 55  TFFLFF--ILLCFIFVFFFTFFI---FLLEM*YVGSI 86
           +FF+FF    LCF F FFF  F+   F L + +VGS+
Sbjct: 196 SFFVFFWCFFLCFFFPFFFLAFVRLRFPLLLGFVGSL 86



 Score = 29.3 bits (64), Expect = 2.8
 Identities = 12/20 (60%), Positives = 12/20 (60%)
 Frame = -2

Query: 59  FFILLCFIFVFFFTFFIFLL 78
           FF  LC   VFFF FF  LL
Sbjct: 203 FFFFLCVFLVFFFVFFFSLL 144


>TC83341 weakly similar to GP|8978076|dbj|BAA98104.1 gene_id:K14A3.4~unknown
           protein {Arabidopsis thaliana}, partial (80%)
          Length = 1253

 Score = 31.2 bits (69), Expect = 0.74
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = -3

Query: 47  VAYNTVVITFFLFFILLCFIFVFFFTF 73
           V +N +VI FFLF  L  F+F+F  +F
Sbjct: 654 VFFNIIVIFFFLFLFLFLFLFLFLKSF 574


>BE316406 similar to PIR|F71619|F716 hypothetical protein PFB0235w - malaria
           parasite (Plasmodium falciparum), partial (4%)
          Length = 531

 Score = 30.8 bits (68), Expect = 0.97
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = +1

Query: 55  TFFLFFILLCFIFVFFFTFFIFLL 78
           TFF FF    F F FFF +F F L
Sbjct: 148 TFFTFFFFFFFFFFFFFFYFSFSL 219



 Score = 29.3 bits (64), Expect = 2.8
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 49  YNTVVITFFLFFILLCFIFVFFFTF 73
           +++   TFF FF    F F F+F+F
Sbjct: 139 FHSTFFTFFFFFFFFFFFFFFYFSF 213


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.337    0.146    0.453 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,226,108
Number of Sequences: 36976
Number of extensions: 178477
Number of successful extensions: 4353
Number of sequences better than 10.0: 110
Number of HSP's better than 10.0 without gapping: 3806
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4223
length of query: 400
length of database: 9,014,727
effective HSP length: 98
effective length of query: 302
effective length of database: 5,391,079
effective search space: 1628105858
effective search space used: 1628105858
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.7 bits)
S2: 59 (27.3 bits)


Medicago: description of AC146791.3