BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146784.6 - phase: 0
(617 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC77971 similar to PIR|T06794|T06794 vacuolar sorting receptor p... 360 0.0
TC88456 similar to GP|15487292|dbj|BAB64531. vacuolar sorting re... 575 e-164
TC78956 similar to PIR|G86434|G86434 protein F17F8.23 [imported]... 266 e-104
TC87121 weakly similar to PIR|T06794|T06794 vacuolar sorting rec... 288 4e-78
TC78813 homologue to PIR|T06794|T06794 vacuolar sorting receptor... 227 1e-59
TC92174 homologue to PIR|T06794|T06794 vacuolar sorting receptor... 201 7e-52
BE942327 similar to GP|15487292|dbj vacuolar sorting receptor {V... 164 1e-40
BE240541 homologue to GP|15487292|dbj vacuolar sorting receptor ... 71 1e-12
TC84727 similar to GP|16118856|gb|AAL14629.1 growth-on protein G... 49 4e-06
TC86352 similar to PIR|H86192|H86192 hypothetical protein [impor... 49 7e-06
TC84761 32 0.55
TC86613 similar to GP|22136866|gb|AAM91777.1 unknown protein {Ar... 30 2.1
TC90908 similar to GP|21539559|gb|AAM53332.1 unknown protein {Ar... 30 2.7
TC78802 similar to GP|19424009|gb|AAL87286.1 unknown protein {Ar... 30 2.7
TC77245 similar to GP|6630556|gb|AAF19575.1| putative alpha-L-ar... 29 6.1
BQ139902 28 8.0
>TC77971 similar to PIR|T06794|T06794 vacuolar sorting receptor protein
BP-80 - garden pea, partial (97%)
Length = 2578
Score = 360 bits (924), Expect(2) = 0.0
Identities = 180/320 (56%), Positives = 222/320 (69%), Gaps = 9/320 (2%)
Frame = +1
Query: 8 LLLCVLVLFLE-CCFGRFLVEKNSLRITSPKSLKGSYECAIGNFGVPQYGGTLVGSVVYP 66
LLL L+L L +F+VEKNSLR+TSP S+KG+Y+ AIGNFG+PQYGG++ G+VVYP
Sbjct: 367 LLLGFLLLSLTPSSMAKFVVEKNSLRVTSPDSIKGTYDSAIGNFGIPQYGGSMAGNVVYP 546
Query: 67 NVNQKGCKNFTDFSASFHSMPGNFPTFVLVDRGDCYFTLKAWNAQNGGAAAILVADDREE 126
NQKGCK F + SF S PG PT VL+DRG C+F LK WNAQ GA+++LVADD EE
Sbjct: 547 KDNQKGCKEFDESGISFKSKPGALPTIVLLDRGSCFFALKVWNAQKAGASSVLVADDIEE 726
Query: 127 TLITMDTPEEGNVVNDDYIEKINIPSALISKSLGDRIKKALSDGEMVHINLDWREALPHP 186
LITMDTPEE + YIE I IPSALI K+ G+++KKA+S G+MV++NLDWREA+PHP
Sbjct: 727 KLITMDTPEEDG-SSAKYIENITIPSALIEKNFGEKLKKAISGGDMVNVNLDWREAVPHP 903
Query: 187 DDRVEYELWTNSNDECGPKCDNQI--------NFVKSFKGAAQLLEKKGFTQFTPHYITW 238
DDRVEYEL GP + N + + + K P +
Sbjct: 904 DDRVEYEL-------SGPTAMMSVELNAIC*WNL*RILRVRHKY*RKVVMPSLHPTILLG 1062
Query: 239 YCPKEFLLSRRCKSQCINHGRYCAPDPEQDFNKGYDGKDVVVQNLRQACFFKVANESGRP 298
P+ F LS++CKSQCINHGRYCAPDPEQDF+ GYDGKDVV++NLRQ C FKVANE+ +P
Sbjct: 1063TVPQAFTLSKQCKSQCINHGRYCAPDPEQDFSTGYDGKDVVIENLRQLCVFKVANETKKP 1242
Query: 299 WQWWDYVTDFSIRCPMKEKK 318
W WWDYVTDF I P + +K
Sbjct: 1243WVWWDYVTDFQIMVPNEGEK 1302
Score = 328 bits (840), Expect(2) = 0.0
Identities = 161/324 (49%), Positives = 214/324 (65%), Gaps = 27/324 (8%)
Frame = +3
Query: 315 KEKKYTEECSDEVIKSLGVDLKKIKDCVGDPLADVENPVLKAEQEAQIGKESRGDVTILP 374
+ K +C+D VI+SLG+D+KKI+ C+GDP AD EN VLK EQ+AQ+GK SRGDVTILP
Sbjct: 1293 RRKNTIMKCADAVIESLGLDIKKIERCMGDPDADSENSVLKEEQDAQVGKGSRGDVTILP 1472
Query: 375 TLVINNRQYRGKLSRPAVLKAMCAGFQETTEPSICLTPDMETNECLENNGGCWKEKSSNI 434
TLV+N+RQYRGKL + AV+KA+C+GF+ETTEP++CL+ ++ETNECLENNGGCWK+K++NI
Sbjct: 1473 TLVVNSRQYRGKLEKGAVMKAICSGFEETTEPAVCLSSEVETNECLENNGGCWKDKAANI 1652
Query: 435 TACRDTFRGRVCVCPVVNNIKFVGDGYTHCEASGTLSCEFNNGGCWKASHGGRLYSACHD 494
TAC+DTFRGRVC CP+V+ ++F GDGYT CEASG C+ NNGGCW + G +SAC D
Sbjct: 1653 TACKDTFRGRVCECPLVDGVQFKGDGYTTCEASGPGRCKINNGGCWHEARNGHAFSACSD 1832
Query: 495 DYRKGCECPSGFRGDGVRSCEDCFNIFRILTMLQILMNAKKSRLASVHNANAKIPLGVMS 554
+ CECP+GF+GDGV++C D + K+ + + K G +
Sbjct: 1833 NGAVKCECPAGFKGDGVKNCAD-------------IDECKEKKACQCPECSCKNTWGSYN 1973
Query: 555 AS-------------AIAVCSTHE--------------KMTRVLSGGYAFYKYRIQRYMD 587
S I+ ++ E + SG Y YKYRI+ YMD
Sbjct: 1974 CSCSGDLLYIRDHDACISKTASQEGGKSAWAAFWVIVVGLVLAASGAYLVYKYRIRSYMD 2153
Query: 588 TEIRAIMAQYMPLDNQPLIIPNPN 611
+EIRAIMAQYMPLD+Q ++ + N
Sbjct: 2154 SEIRAIMAQYMPLDSQSEVVNHVN 2225
>TC88456 similar to GP|15487292|dbj|BAB64531. vacuolar sorting receptor
{Vigna mungo}, partial (41%)
Length = 980
Score = 575 bits (1481), Expect = e-164
Identities = 272/272 (100%), Positives = 272/272 (100%)
Frame = +2
Query: 1 MIIKLNPLLLCVLVLFLECCFGRFLVEKNSLRITSPKSLKGSYECAIGNFGVPQYGGTLV 60
MIIKLNPLLLCVLVLFLECCFGRFLVEKNSLRITSPKSLKGSYECAIGNFGVPQYGGTLV
Sbjct: 164 MIIKLNPLLLCVLVLFLECCFGRFLVEKNSLRITSPKSLKGSYECAIGNFGVPQYGGTLV 343
Query: 61 GSVVYPNVNQKGCKNFTDFSASFHSMPGNFPTFVLVDRGDCYFTLKAWNAQNGGAAAILV 120
GSVVYPNVNQKGCKNFTDFSASFHSMPGNFPTFVLVDRGDCYFTLKAWNAQNGGAAAILV
Sbjct: 344 GSVVYPNVNQKGCKNFTDFSASFHSMPGNFPTFVLVDRGDCYFTLKAWNAQNGGAAAILV 523
Query: 121 ADDREETLITMDTPEEGNVVNDDYIEKINIPSALISKSLGDRIKKALSDGEMVHINLDWR 180
ADDREETLITMDTPEEGNVVNDDYIEKINIPSALISKSLGDRIKKALSDGEMVHINLDWR
Sbjct: 524 ADDREETLITMDTPEEGNVVNDDYIEKINIPSALISKSLGDRIKKALSDGEMVHINLDWR 703
Query: 181 EALPHPDDRVEYELWTNSNDECGPKCDNQINFVKSFKGAAQLLEKKGFTQFTPHYITWYC 240
EALPHPDDRVEYELWTNSNDECGPKCDNQINFVKSFKGAAQLLEKKGFTQFTPHYITWYC
Sbjct: 704 EALPHPDDRVEYELWTNSNDECGPKCDNQINFVKSFKGAAQLLEKKGFTQFTPHYITWYC 883
Query: 241 PKEFLLSRRCKSQCINHGRYCAPDPEQDFNKG 272
PKEFLLSRRCKSQCINHGRYCAPDPEQDFNKG
Sbjct: 884 PKEFLLSRRCKSQCINHGRYCAPDPEQDFNKG 979
>TC78956 similar to PIR|G86434|G86434 protein F17F8.23 [imported] -
Arabidopsis thaliana, partial (47%)
Length = 1744
Score = 266 bits (679), Expect(2) = e-104
Identities = 119/174 (68%), Positives = 147/174 (84%)
Frame = +1
Query: 271 KGYDGKDVVVQNLRQACFFKVANESGRPWQWWDYVTDFSIRCPMKEKKYTEECSDEVIKS 330
+GYDGKD+V +NLRQ C VANE+GR W WWDYVTDF +RC MKEKKY+++C++ V+KS
Sbjct: 1 EGYDGKDIVYENLRQLCVHLVANETGRSWVWWDYVTDFHVRCSMKEKKYSKDCAEVVMKS 180
Query: 331 LGVDLKKIKDCVGDPLADVENPVLKAEQEAQIGKESRGDVTILPTLVINNRQYRGKLSRP 390
L + L KIK CVGDP ADVEN VLK EQ +QIG SRGDVTILPTLV+NN QYRGKL R
Sbjct: 181 LDLPLDKIKKCVGDPEADVENEVLKIEQTSQIGGGSRGDVTILPTLVLNNVQYRGKLERT 360
Query: 391 AVLKAMCAGFQETTEPSICLTPDMETNECLENNGGCWKEKSSNITACRDTFRGR 444
+VLKA+CAGF+ETTEP +CL+ D+ETNECLE NGGCW++++ N+TAC+DTF+G+
Sbjct: 361 SVLKAICAGFKETTEPQVCLSGDIETNECLERNGGCWEDRNVNVTACKDTFQGK 522
Score = 130 bits (327), Expect(2) = e-104
Identities = 72/182 (39%), Positives = 97/182 (52%), Gaps = 12/182 (6%)
Frame = +2
Query: 438 RDTFRGRVCVCPVVNNIKFVGDGYTHCEASGTLSCEFNNGGCWKASHGGRLYSACHDDYR 497
R FRGRVC CPVV +++ GDGYT CEA G C NNGGCW + +SAC +
Sbjct: 503 RILFRGRVCECPVVKGVQYRGDGYTSCEAFGPARCSLNNGGCWSETRDKITFSACSESKV 682
Query: 498 KGCECPSGFRGDGVRSCEDCFNIFRILTMLQILMNAKKSRLASVHNANAKIPLGVMSASA 557
GC CP GF GDG CED + + + Q + K+ S ++ K L M
Sbjct: 683 NGCHCPVGFDGDGNNKCED-VDECKEKSACQCDDCSCKNTWGS-YDCKCKGGLLYMKEQD 856
Query: 558 IAVCSTHEKMTRVLS------------GGYAFYKYRIQRYMDTEIRAIMAQYMPLDNQPL 605
+ + + K +V++ GY FYKYR++ YMD+EI AIM+QYMPLD Q
Sbjct: 857 MCIERSGSKFGKVVAFVVIAVVVGAGLAGYVFYKYRLRSYMDSEIMAIMSQYMPLDQQNN 1036
Query: 606 II 607
++
Sbjct: 1037VV 1042
>TC87121 weakly similar to PIR|T06794|T06794 vacuolar sorting receptor
protein BP-80 - garden pea, partial (30%)
Length = 810
Score = 288 bits (737), Expect = 4e-78
Identities = 141/256 (55%), Positives = 183/256 (71%), Gaps = 3/256 (1%)
Frame = +2
Query: 5 LNPLLLCVLVLFLECCF--GRFLVEKNSLRITSPKSLKGSYECAIGNFGVPQYGGTLVGS 62
+ P ++ + VLF + GRF+VEKNS+ + SP L+G + AIGNFG+P YGG +VGS
Sbjct: 50 MKPCMVFLFVLFFLHSYVQGRFVVEKNSITVLSPHKLRGKNDGAIGNFGIPNYGGYIVGS 229
Query: 63 VVYPNVNQKGCKNFT-DFSASFHSMPGNFPTFVLVDRGDCYFTLKAWNAQNGGAAAILVA 121
+VYP GC+ F D F S + PT VL+DRG+CYF LK W+AQ GAAA+LVA
Sbjct: 230 LVYPEKGSHGCQVFEGDKPFKFQS---HRPTIVLLDRGECYFALKVWHAQLAGAAAVLVA 400
Query: 122 DDREETLITMDTPEEGNVVNDDYIEKINIPSALISKSLGDRIKKALSDGEMVHINLDWRE 181
D +E+LITMD+PEE + YIEKI IPS L+ KS GD +K+AL++ + V + +DWRE
Sbjct: 401 DSIDESLITMDSPEESTDA-EGYIEKIVIPSVLVEKSFGDSLKEALNNKDEVLLRIDWRE 577
Query: 182 ALPHPDDRVEYELWTNSNDECGPKCDNQINFVKSFKGAAQLLEKKGFTQFTPHYITWYCP 241
++PHPD+RVEYE WTNSNDECG +CD Q+NFVK+FKG AQ+LE+ G+T FTPHYITW
Sbjct: 578 SVPHPDNRVEYEFWTNSNDECGARCDEQMNFVKNFKGHAQILERSGYTLFTPHYITWVLS 757
Query: 242 KEFLLSRRCKSQCINH 257
K + +CKS CINH
Sbjct: 758 KAIC*TSQCKSXCINH 805
>TC78813 homologue to PIR|T06794|T06794 vacuolar sorting receptor protein
BP-80 - garden pea, partial (37%)
Length = 1043
Score = 227 bits (578), Expect = 1e-59
Identities = 111/248 (44%), Positives = 151/248 (60%), Gaps = 25/248 (10%)
Frame = +2
Query: 393 LKAMCAGFQETTEPSICLTPDMETNECLENNGGCWKEKSSNITACRDTFRGRVCVCPVVN 452
LKA+C+GF+ETT+P++CL+ D+ETNECL NNGGCW++K++NITAC+DTFRGRVC CP+V+
Sbjct: 2 LKAICSGFEETTDPAVCLSNDVETNECLTNNGGCWQDKAANITACKDTFRGRVCECPLVD 181
Query: 453 NIKFVGDGYTHCEASGTLSCEFNNGGCWKASHGGRLYSACHDDYRKGCECPSGFRGDGVR 512
++F GDGYT CE G C+ NNGGCW + G +SAC DD C+CP+GF+GDGV+
Sbjct: 182 GVQFKGDGYTTCEVGGPGRCKINNGGCWHDARNGHAFSACLDDGGVKCQCPTGFKGDGVK 361
Query: 513 SCEDCFNIFRILTMLQILMNAKKSRLASVHNANAKIPLGVMSAS-------------AIA 559
+CED + K+ + + K G S I+
Sbjct: 362 NCED-------------IDECKEKKACQCPECSCKNTWGSYDCSCSGDLLYIKDHDTCIS 502
Query: 560 VCSTHEKMT------------RVLSGGYAFYKYRIQRYMDTEIRAIMAQYMPLDNQPLII 607
++ K T + GG+ YKYRI++YMD+EIRAIMAQYMPLD+Q +
Sbjct: 503 KTASQAKSTWAAFWVILIGLGMIAGGGFLVYKYRIRQYMDSEIRAIMAQYMPLDSQAEV- 679
Query: 608 PNPNQVHH 615
PN V+H
Sbjct: 680 --PNHVNH 697
>TC92174 homologue to PIR|T06794|T06794 vacuolar sorting receptor protein
BP-80 - garden pea, partial (28%)
Length = 669
Score = 201 bits (511), Expect = 7e-52
Identities = 97/160 (60%), Positives = 121/160 (75%)
Frame = +3
Query: 23 RFLVEKNSLRITSPKSLKGSYECAIGNFGVPQYGGTLVGSVVYPNVNQKGCKNFTDFSAS 82
RF+VEKNSL +TSP +KG ++ AIGNFG+PQYGG++ G+VVYP N KGCK+F D S+S
Sbjct: 195 RFVVEKNSLSVTSPDKIKGKHDSAIGNFGIPQYGGSMAGNVVYPKDNNKGCKDFDD-SSS 371
Query: 83 FHSMPGNFPTFVLVDRGDCYFTLKAWNAQNGGAAAILVADDREETLITMDTPEEGNVVND 142
F S PG PT +L+DRG C+F LK WNA GA+A+LVADD EE LITMDTPEE +V +
Sbjct: 372 FKSKPGALPTILLLDRGSCFFALKVWNAXKAGASAVLVADDIEEPLITMDTPEE-DVSSA 548
Query: 143 DYIEKINIPSALISKSLGDRIKKALSDGEMVHINLDWREA 182
YIE I IPSALI K+ G + A+ G+M ++NLDWREA
Sbjct: 549 KYIENITIPSALIGKTFGXXLXDAIXGGDMXNVNLDWREA 668
>BE942327 similar to GP|15487292|dbj vacuolar sorting receptor {Vigna mungo},
partial (12%)
Length = 235
Score = 164 bits (414), Expect = 1e-40
Identities = 74/78 (94%), Positives = 76/78 (96%)
Frame = +2
Query: 275 GKDVVVQNLRQACFFKVANESGRPWQWWDYVTDFSIRCPMKEKKYTEECSDEVIKSLGVD 334
GKDV VQN RQACFFKVANESGRPWQWWDYVTDFSIRCPMKEKKYT+ECSDEVIKSLGVD
Sbjct: 2 GKDVEVQNSRQACFFKVANESGRPWQWWDYVTDFSIRCPMKEKKYTQECSDEVIKSLGVD 181
Query: 335 LKKIKDCVGDPLADVENP 352
LKKIKDCVGDP+ADVENP
Sbjct: 182 LKKIKDCVGDPIADVENP 235
>BE240541 homologue to GP|15487292|dbj vacuolar sorting receptor {Vigna
mungo}, partial (4%)
Length = 294
Score = 70.9 bits (172), Expect = 1e-12
Identities = 32/32 (100%), Positives = 32/32 (100%)
Frame = +2
Query: 586 MDTEIRAIMAQYMPLDNQPLIIPNPNQVHHDI 617
MDTEIRAIMAQYMPLDNQPLIIPNPNQVHHDI
Sbjct: 2 MDTEIRAIMAQYMPLDNQPLIIPNPNQVHHDI 97
>TC84727 similar to GP|16118856|gb|AAL14629.1 growth-on protein GRO10
{Euphorbia esula}, partial (47%)
Length = 936
Score = 49.3 bits (116), Expect = 4e-06
Identities = 26/84 (30%), Positives = 48/84 (56%)
Frame = +2
Query: 94 VLVDRGDCYFTLKAWNAQNGGAAAILVADDREETLITMDTPEEGNVVNDDYIEKINIPSA 153
++VDRG+C FT KA +AQN A+AIL+ ++++E + P+E ++ I+IP+
Sbjct: 380 IMVDRGNCTFTKKANSAQNANASAILIINNQKELYKMVCDPDETDL-------SIHIPAG 538
Query: 154 LISKSLGDRIKKALSDGEMVHINL 177
++ G +++ L V + L
Sbjct: 539 MLPLDAGTKLENMLKSTSSVSVQL 610
>TC86352 similar to PIR|H86192|H86192 hypothetical protein [imported] -
Arabidopsis thaliana, partial (37%)
Length = 2150
Score = 48.5 bits (114), Expect = 7e-06
Identities = 30/80 (37%), Positives = 44/80 (54%)
Frame = +3
Query: 98 RGDCYFTLKAWNAQNGGAAAILVADDREETLITMDTPEEGNVVNDDYIEKINIPSALISK 157
RG C F LKA AQ+GGA +L+ ++ EE L+ M V D I IP +I+K
Sbjct: 519 RGGCDFQLKATIAQSGGATGVLIINN-EEDLVEM-------VCTDSTEANITIPVVMITK 674
Query: 158 SLGDRIKKALSDGEMVHINL 177
S G+ + +L+ G+ V + L
Sbjct: 675 SAGEALNTSLTSGKRVDVLL 734
>TC84761
Length = 620
Score = 32.3 bits (72), Expect = 0.55
Identities = 15/43 (34%), Positives = 22/43 (50%)
Frame = -1
Query: 242 KEFLLSRRCKSQCINHGRYCAPDPEQDFNKGYDGKDVVVQNLR 284
K FL S KSQCINH C + F + + + + + NL+
Sbjct: 191 KRFLKSTNSKSQCINHHSRCNESELKKFEENFQDRRINLINLK 63
>TC86613 similar to GP|22136866|gb|AAM91777.1 unknown protein {Arabidopsis
thaliana}, partial (75%)
Length = 2134
Score = 30.4 bits (67), Expect = 2.1
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +1
Query: 93 FVLVDRGDCYFTLKAWNAQNGGAAAILVADDRE-ETLITMDTPEEGNVVNDDYIEKINIP 151
FVL+ RG C F K AQ+ G A +V D + L+ M G ++I
Sbjct: 520 FVLMVRGGCSFEDKVRIAQSAGYKAAIVYDSEDGGILVAMAGNSAG----------VSIH 669
Query: 152 SALISKSLGDRIKK 165
+ +SK+ G+ +KK
Sbjct: 670 AVFVSKASGEILKK 711
>TC90908 similar to GP|21539559|gb|AAM53332.1 unknown protein {Arabidopsis
thaliana}, partial (20%)
Length = 869
Score = 30.0 bits (66), Expect = 2.7
Identities = 18/83 (21%), Positives = 34/83 (40%)
Frame = -3
Query: 212 FVKSFKGAAQLLEKKGFTQFTPHYITWYCPKEFLLSRRCKSQCINHGRYCAPDPEQDFNK 271
FV + +G + + Q W+C L ++ S I G Y P Q FN+
Sbjct: 477 FVSNGEGRSYINSYLNILQLFESNFQWFCHHTIFLKKQASSLFITLGLYGEYFPAQAFNR 298
Query: 272 GYDGKDVVVQNLRQACFFKVANE 294
++ + + + C F+V ++
Sbjct: 297 TFN-----LGKINRKCMFRVQDK 244
>TC78802 similar to GP|19424009|gb|AAL87286.1 unknown protein {Arabidopsis
thaliana}, complete
Length = 1151
Score = 30.0 bits (66), Expect = 2.7
Identities = 11/29 (37%), Positives = 17/29 (57%)
Frame = +2
Query: 233 PHYITWYCPKEFLLSRRCKSQCINHGRYC 261
P+ I W C K+ + R+C + C N R+C
Sbjct: 701 PNKI*WSCKKDNVWRRQCSNSCSNWTRHC 787
>TC77245 similar to GP|6630556|gb|AAF19575.1| putative
alpha-L-arabinofuranosidase {Arabidopsis thaliana},
partial (89%)
Length = 2351
Score = 28.9 bits (63), Expect = 6.1
Identities = 13/40 (32%), Positives = 22/40 (54%)
Frame = +2
Query: 161 DRIKKALSDGEMVHINLDWREALPHPDDRVEYELWTNSND 200
D I++A D +++ L HP D +Y ++TN+ND
Sbjct: 1394 DAIRRAYPDIQIISNCDGSSRPLDHPADMYDYHIYTNAND 1513
>BQ139902
Length = 338
Score = 28.5 bits (62), Expect = 8.0
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +3
Query: 500 CECPSGFRGDGVRSCEDCFNIFRILTMLQILMNAKKSRLAS 540
CECP G G+ S RIL QIL++ +K++L S
Sbjct: 177 CECPHPGMGTGIESK-------RILNKRQILLSGEKNKLIS 278
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.321 0.138 0.437
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,358,990
Number of Sequences: 36976
Number of extensions: 357702
Number of successful extensions: 1765
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1753
length of query: 617
length of database: 9,014,727
effective HSP length: 102
effective length of query: 515
effective length of database: 5,243,175
effective search space: 2700235125
effective search space used: 2700235125
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Medicago: description of AC146784.6