BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146784.5 + phase: 0
(283 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC80136 similar to PIR|T50861|T50861 DNA-binding protein 4 [impo... 594 e-170
TC83285 weakly similar to GP|7406995|gb|AAF61863.1| DNA-binding ... 285 1e-77
TC78190 weakly similar to PIR|T49041|T49041 DNA-binding protein-... 130 4e-31
TC84217 similar to GP|13507101|gb|AAK28442.1 WRKY DNA-binding pr... 108 2e-24
TC86292 similar to GP|17064164|gb|AAL35289.1 WRKY transcription ... 102 1e-22
TC86532 similar to GP|17064164|gb|AAL35289.1 WRKY transcription ... 100 6e-22
TC89911 similar to GP|13507101|gb|AAK28442.1 WRKY DNA-binding pr... 63 3e-20
BQ137757 similar to GP|17064164|gb| WRKY transcription factor 41... 59 1e-15
BG646592 similar to GP|13507101|gb| WRKY DNA-binding protein 53 ... 63 3e-15
TC89453 similar to GP|9187622|emb|CAB97004.1 WRKY DNA binding pr... 75 2e-14
TC82987 similar to GP|15991740|gb|AAL13047.1 WRKY transcription ... 71 5e-13
TC80165 similar to PIR|A84913|A84913 probable WRKY-type DNA bind... 70 7e-13
TC80208 similar to GP|17064158|gb|AAL35286.1 WRKY transcription ... 69 2e-12
TC88395 similar to SP|Q9LP56|WR65_ARATH Probable WRKY transcript... 69 2e-12
TC81471 similar to PIR|A84913|A84913 probable WRKY-type DNA bind... 69 3e-12
TC92972 similar to GP|9187622|emb|CAB97004.1 WRKY DNA binding pr... 67 8e-12
TC79565 similar to SP|Q9ZQ70|WRK3_ARATH Probable WRKY transcript... 65 3e-11
AL371844 similar to GP|17064164|gb| WRKY transcription factor 41... 64 5e-11
TC86084 similar to GP|21537078|gb|AAM61419.1 putaive DNA-binding... 64 9e-11
TC87470 similar to SP|Q9LP56|WR65_ARATH Probable WRKY transcript... 63 1e-10
>TC80136 similar to PIR|T50861|T50861 DNA-binding protein 4 [imported] -
common tobacco (fragment), partial (33%)
Length = 1276
Score = 594 bits (1531), Expect = e-170
Identities = 283/283 (100%), Positives = 283/283 (100%)
Frame = +2
Query: 1 MENENLAHGGRGKVVDELLRGRELANKLRNILNESGDIYNNDGSTIPPFAEDLLKEVLTT 60
MENENLAHGGRGKVVDELLRGRELANKLRNILNESGDIYNNDGSTIPPFAEDLLKEVLTT
Sbjct: 68 MENENLAHGGRGKVVDELLRGRELANKLRNILNESGDIYNNDGSTIPPFAEDLLKEVLTT 247
Query: 61 FTNSLLFLNNNPTSEGSDMQLTKSEDSLESNCKSSIVKERRGCYKRRKISQTWEKESEQP 120
FTNSLLFLNNNPTSEGSDMQLTKSEDSLESNCKSSIVKERRGCYKRRKISQTWEKESEQP
Sbjct: 248 FTNSLLFLNNNPTSEGSDMQLTKSEDSLESNCKSSIVKERRGCYKRRKISQTWEKESEQP 427
Query: 121 EEDGHQWRKYGQKKILHTDFPRNYYRCTHKNDQGCKAIKQVQRIQEDPPLHRTTYSGHHT 180
EEDGHQWRKYGQKKILHTDFPRNYYRCTHKNDQGCKAIKQVQRIQEDPPLHRTTYSGHHT
Sbjct: 428 EEDGHQWRKYGQKKILHTDFPRNYYRCTHKNDQGCKAIKQVQRIQEDPPLHRTTYSGHHT 607
Query: 181 CRILQNPEIIVDYPTDHSSMFLSFDNSFPTPAKQDCPFLSVKKEECKEEVVHPPPSSNDY 240
CRILQNPEIIVDYPTDHSSMFLSFDNSFPTPAKQDCPFLSVKKEECKEEVVHPPPSSNDY
Sbjct: 608 CRILQNPEIIVDYPTDHSSMFLSFDNSFPTPAKQDCPFLSVKKEECKEEVVHPPPSSNDY 787
Query: 241 LSGLTFDDPEKDVTLSSTLDSHDHLGVHISDIMYDDVLNWPLS 283
LSGLTFDDPEKDVTLSSTLDSHDHLGVHISDIMYDDVLNWPLS
Sbjct: 788 LSGLTFDDPEKDVTLSSTLDSHDHLGVHISDIMYDDVLNWPLS 916
>TC83285 weakly similar to GP|7406995|gb|AAF61863.1| DNA-binding protein 3
{Nicotiana tabacum}, partial (17%)
Length = 657
Score = 285 bits (730), Expect = 1e-77
Identities = 146/192 (76%), Positives = 159/192 (82%), Gaps = 3/192 (1%)
Frame = +3
Query: 8 HG-GRGKVVDELLRGRELANKLRNILNESGDIYNNDGSTIPPFAEDLLKEVLTTFTNSLL 66
HG GRGKV+DEL RGRELAN+L+NILNESGD + +GST P FAEDLLKEVLTTFTNSLL
Sbjct: 81 HGSGRGKVIDELRRGRELANQLKNILNESGDFDDINGSTTP-FAEDLLKEVLTTFTNSLL 257
Query: 67 FLNNNPTSEGSDMQLTKSEDSLESNCKS-SIVKERRGCYKRRKISQTWEKESEQPEEDGH 125
FLNNNPTSEGSDMQLTKSEDSLESNCKS SIVKERRGCYKRRK+SQTWEKES++P EDGH
Sbjct: 258 FLNNNPTSEGSDMQLTKSEDSLESNCKSTSIVKERRGCYKRRKVSQTWEKESDRPVEDGH 437
Query: 126 QWRKYGQKKILHTDFPRNYYRCTHKNDQGCKAIK-QVQRIQEDPPLHRTTYSGHHTCRIL 184
QWRKYGQKKILHTDFPRNYYRCTHK+DQG + K + L HHTC IL
Sbjct: 438 QWRKYGQKKILHTDFPRNYYRCTHKHDQGLQXNKTSATNSRRSTSLQNNPTMPHHTCXIL 617
Query: 185 QNPEIIVDYPTD 196
Q+ EII+D P D
Sbjct: 618 QSSEIIMDSPCD 653
>TC78190 weakly similar to PIR|T49041|T49041 DNA-binding protein-like -
Arabidopsis thaliana, partial (27%)
Length = 1254
Score = 130 bits (328), Expect = 4e-31
Identities = 76/187 (40%), Positives = 116/187 (61%), Gaps = 10/187 (5%)
Frame = +1
Query: 14 VVDELLRGRELANKLRNILNESGDIYNNDGSTIPPFAEDLLKEVLTTFTNSLLFLNN--- 70
++ ELL+G+E A +L+ +L +DGS P ++L+ VL +F+ ++ +N+
Sbjct: 199 LIKELLQGKEYATQLKLLLKNP---VCSDGS---PSVKELVTNVLRSFSETISVMNSTED 360
Query: 71 -----NPTSEGSDMQLTKSEDSLESNCK-SSIVKERRGCYKRRKISQTWEKESEQPEEDG 124
N + + KSED+ ES + S K+RRG YKRRK +T S+ D
Sbjct: 361 CSLDVNDSGSLVEADDLKSEDTSESKKRLSPTTKDRRGSYKRRKTDETRTIVSKTIG-DT 537
Query: 125 HQWRKYGQKKILHTDFPRNYYRCTHKNDQGCKAIKQVQRIQEDPPLHRTTYSGHHTCR-I 183
H WRKYGQK+IL+++FPR+Y+RCT K+DQGCKA KQVQ I+E+P +++ TY G HTC+
Sbjct: 538 HSWRKYGQKEILNSNFPRSYFRCTRKHDQGCKATKQVQLIEENPEMYQITYIGFHTCKST 717
Query: 184 LQNPEII 190
L P+++
Sbjct: 718 LHTPQMV 738
>TC84217 similar to GP|13507101|gb|AAK28442.1 WRKY DNA-binding protein 53
{Arabidopsis thaliana}, partial (21%)
Length = 706
Score = 108 bits (271), Expect = 2e-24
Identities = 70/204 (34%), Positives = 93/204 (45%), Gaps = 26/204 (12%)
Frame = +1
Query: 9 GGRGKVVDELLRGRELANKLRNILNESGDIYNNDGSTIPPFAEDLLKEVLTTFTNSLLFL 68
G ++DELL G ELA +L+ IY N S+ E L++++++TF +L +
Sbjct: 40 GDSKNLIDELLHGLELARQLQ--------IYLNVSSSSNETREILIQKIISTFEKALEMV 195
Query: 69 NNNP---TSEGSDMQLTKSEDSLESNCKSS---------------IVKERRGCYKRRKIS 110
N E S Q + +L S ++ KR +
Sbjct: 196 NRKRHVNMGESSKQQYPSASGTLAIRISDSPPLSCSPRSEDSDRDFNRDHNASRKRNTLP 375
Query: 111 QTWEKE--------SEQPEEDGHQWRKYGQKKILHTDFPRNYYRCTHKNDQGCKAIKQVQ 162
W K E P +DG+ WRKYGQK IL PR YYRCTH+N GC A KQVQ
Sbjct: 376 IRWTKHIRVEPGMAMEGPLDDGYSWRKYGQKDILGAMHPRGYYRCTHRNVLGCLATKQVQ 555
Query: 163 RIQEDPPLHRTTYSGHHTCRILQN 186
R EDP + TY G+HTC I N
Sbjct: 556 RSDEDPTIFEITYRGNHTCTIASN 627
>TC86292 similar to GP|17064164|gb|AAL35289.1 WRKY transcription factor 41
{Arabidopsis thaliana}, partial (21%)
Length = 1529
Score = 102 bits (255), Expect = 1e-22
Identities = 68/203 (33%), Positives = 101/203 (49%), Gaps = 22/203 (10%)
Frame = +3
Query: 1 MENE-NLAHGGRGKVVDELLRGRELANKLRNILNESGDIYNNDGSTIPPFAEDLLKEVLT 59
MENE N H +++EL++G ++A +L+ L + D ++ +L+
Sbjct: 222 MENECNWEHN---TLINELIQGMDVAKRLKEDLRTPYSLGTRDSQ---------MQMILS 365
Query: 60 TFTNSLLFLN-NNPTSEGSDMQ--LTKSEDSLESNCKSSIVKERRGCY----------KR 106
++ +L L N TS+ + +T +S S S + ++ G + K+
Sbjct: 366 SYEKALQILRCNESTSKSQPVTPVITSLPESPVSTNGSPLSEDFDGTFQDHQEVKNKSKK 545
Query: 107 RKISQTW--------EKESEQPEEDGHQWRKYGQKKILHTDFPRNYYRCTHKNDQGCKAI 158
RK++ W + E P EDG+ WRKYGQK IL T PR+YYRCT +N Q C A
Sbjct: 546 RKVAPKWMDQIRVSCDSSLEGPNEDGYNWRKYGQKDILGTKHPRSYYRCTFRNTQDCWAT 725
Query: 159 KQVQRIQEDPPLHRTTYSGHHTC 181
KQVQR EDP + TY G HTC
Sbjct: 726 KQVQRSDEDPTIFDITYRGKHTC 794
>TC86532 similar to GP|17064164|gb|AAL35289.1 WRKY transcription factor 41
{Arabidopsis thaliana}, partial (25%)
Length = 1620
Score = 100 bits (249), Expect = 6e-22
Identities = 62/184 (33%), Positives = 92/184 (49%), Gaps = 16/184 (8%)
Frame = +1
Query: 14 VVDELLRGRELANKLRNIL-----NESGDIYNNDGSTIPPFAEDLLKEVLTTFTNSLLFL 68
++ EL++G ELA KL + + S ++ ST + L+ +++ + ++
Sbjct: 265 LIGELIQGEELAKKLYDQIFSPSSPSSSTSSSSSSSTSTSSHQVLIDKLILSIETAITMA 444
Query: 69 NNNP----TSEGSDMQLTKSEDSLESNCKSSIVKERRGCYKRRKISQTWEK-------ES 117
N T+ + M S S +S + S K + KR+ + + E+ +
Sbjct: 445 KGNEGKIKTNNVNMMDSHCSNGSPKSEVQDSKFKHKHVSKKRKTVPKWTEQVKVYSGTAA 624
Query: 118 EQPEEDGHQWRKYGQKKILHTDFPRNYYRCTHKNDQGCKAIKQVQRIQEDPPLHRTTYSG 177
E EDGH WRKYGQK IL FPR YYRCTH++ QGC A KQVQ+ ED + TY G
Sbjct: 625 EGSVEDGHSWRKYGQKDILGAKFPRGYYRCTHRHAQGCLATKQVQKSDEDEMICEITYKG 804
Query: 178 HHTC 181
HTC
Sbjct: 805 RHTC 816
>TC89911 similar to GP|13507101|gb|AAK28442.1 WRKY DNA-binding protein 53
{Arabidopsis thaliana}, partial (21%)
Length = 1302
Score = 63.2 bits (152), Expect(2) = 3e-20
Identities = 27/45 (60%), Positives = 30/45 (66%)
Frame = +3
Query: 142 RNYYRCTHKNDQGCKAIKQVQRIQEDPPLHRTTYSGHHTCRILQN 186
R YYRCTH+N GC A KQVQR EDP + TY G+HTC I N
Sbjct: 540 RGYYRCTHRNVLGCLATKQVQRSDEDPTIFEITYRGNHTCTIASN 674
Score = 52.4 bits (124), Expect(2) = 3e-20
Identities = 44/160 (27%), Positives = 64/160 (39%), Gaps = 26/160 (16%)
Frame = +1
Query: 9 GGRGKVVDELLRGRELANKLRNILNESGDIYNNDGSTIPPFAEDLLKEVLTTFTNSLLFL 68
G ++DELL G ELA +L+ IY N S+ E L++++++TF +L +
Sbjct: 10 GDSKNLIDELLHGLELARQLQ--------IYLNVSSSSNETREILIQKIISTFEKALEMV 165
Query: 69 NNNP---TSEGSDMQLTKSEDSLESNCKSS---------------IVKERRGCYKRRKIS 110
N E S Q + +L S ++ KR +
Sbjct: 166 NRKRHVNMGESSKQQYPSASGTLAIRISDSPPLSCSPRSEDSDRDFNRDHNASRKRNTLP 345
Query: 111 QTWEKE--------SEQPEEDGHQWRKYGQKKILHTDFPR 142
W K E P +DG+ WRKYGQK IL PR
Sbjct: 346 IRWTKHIRVEPGMAMEGPLDDGYSWRKYGQKDILGAMHPR 465
>BQ137757 similar to GP|17064164|gb| WRKY transcription factor 41
{Arabidopsis thaliana}, partial (21%)
Length = 721
Score = 59.3 bits (142), Expect(2) = 1e-15
Identities = 26/45 (57%), Positives = 29/45 (63%)
Frame = +1
Query: 137 HTDFPRNYYRCTHKNDQGCKAIKQVQRIQEDPPLHRTTYSGHHTC 181
H D R+YYRCT +N Q C A KQVQR EDP + TY G HTC
Sbjct: 217 HYDICRSYYRCTFRNTQDCWATKQVQRSDEDPTIFDITYRGKHTC 351
Score = 40.8 bits (94), Expect(2) = 1e-15
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = +3
Query: 108 KISQTWEKESEQPEEDGHQWRKYGQKKILHTDFPR 142
+I + + E P EDG+ WRKYGQK IL T PR
Sbjct: 15 QIRVSCDSSLEGPNEDGYNWRKYGQKDILGTKHPR 119
>BG646592 similar to GP|13507101|gb| WRKY DNA-binding protein 53 {Arabidopsis
thaliana}, partial (19%)
Length = 638
Score = 63.2 bits (152), Expect(2) = 3e-15
Identities = 27/45 (60%), Positives = 30/45 (66%)
Frame = +1
Query: 142 RNYYRCTHKNDQGCKAIKQVQRIQEDPPLHRTTYSGHHTCRILQN 186
R YYRCTH+N GC A KQVQR EDP + TY G+HTC I N
Sbjct: 421 RGYYRCTHRNVLGCLATKQVQRSDEDPTIFEITYRGNHTCTIASN 555
Score = 35.4 bits (80), Expect(2) = 3e-15
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +2
Query: 118 EQPEEDGHQWRKYGQKKILHTDFPR 142
E P +DG+ WRKYGQK IL PR
Sbjct: 272 EGPLDDGYSWRKYGQKDILGAMHPR 346
>TC89453 similar to GP|9187622|emb|CAB97004.1 WRKY DNA binding protein
{Solanum tuberosum}, partial (56%)
Length = 701
Score = 75.5 bits (184), Expect = 2e-14
Identities = 42/113 (37%), Positives = 62/113 (54%), Gaps = 1/113 (0%)
Frame = +1
Query: 69 NNNPTSEGSDMQLTKSEDSLESNCKSSIVKERRGCYKRRKISQTWEKESEQPE-EDGHQW 127
NN + D + K E+ + +++G K +K ++ S+ +DG++W
Sbjct: 301 NNEISVTHDDHEDVKGEEGSVNVIIDQQDVKKKGEKKAKKPKYAFQTRSQVDILDDGYRW 480
Query: 128 RKYGQKKILHTDFPRNYYRCTHKNDQGCKAIKQVQRIQEDPPLHRTTYSGHHT 180
RKYGQK + + FPR+YYRCTH QGC KQVQR+ +D + TTY G HT
Sbjct: 481 RKYGQKAVKNNKFPRSYYRCTH---QGCNVKKQVQRLTKDEGVVVTTYEGVHT 630
>TC82987 similar to GP|15991740|gb|AAL13047.1 WRKY transcription factor 71
{Arabidopsis thaliana}, partial (33%)
Length = 975
Score = 70.9 bits (172), Expect = 5e-13
Identities = 49/171 (28%), Positives = 81/171 (46%), Gaps = 21/171 (12%)
Frame = +1
Query: 30 NILNESGDIYNNDGSTIPPFAEDLLKEVLTTFTNSLLFLNNNPTSE--GSDMQLTKSEDS 87
N L+++ D+ + I ++ K+ +SL+ ++ P S S + EDS
Sbjct: 352 NTLSKAFDLSCSSSEVISSIDDNNTKKSSAGDLSSLVGISETPKSSESSSSNEAVIEEDS 531
Query: 88 LESNCKSSIVKERRGCY-------KRRKISQTWEKESEQPE------------EDGHQWR 128
K + + GC K+ ++ EK+ ++P EDG++WR
Sbjct: 532 TNKKDK----QPKLGCEDGDDEKSKKENKAKKKEKKVKEPRFAFLTKSEIDHLEDGYRWR 699
Query: 129 KYGQKKILHTDFPRNYYRCTHKNDQGCKAIKQVQRIQEDPPLHRTTYSGHH 179
KYGQK + ++ +PR+YYRCT Q C K+V+R +DP + TTY G H
Sbjct: 700 KYGQKAVKNSPYPRSYYRCT---SQKCIVKKRVERSYQDPSIVMTTYEGQH 843
>TC80165 similar to PIR|A84913|A84913 probable WRKY-type DNA binding protein
[imported] - Arabidopsis thaliana, partial (32%)
Length = 1013
Score = 70.5 bits (171), Expect = 7e-13
Identities = 38/114 (33%), Positives = 60/114 (52%), Gaps = 1/114 (0%)
Frame = +1
Query: 70 NNPTSEGSDMQLTKSEDSLESNCKSSIVKERRGCYKRRKISQTWEKESEQPE-EDGHQWR 128
++ +SE + + K+ D + + ++ K R+ + +SE EDG++WR
Sbjct: 475 SSASSEAINDEHNKTVDQTNNQLNKQLKAKKTNQKKPREARIAFMTKSEVDHLEDGYRWR 654
Query: 129 KYGQKKILHTDFPRNYYRCTHKNDQGCKAIKQVQRIQEDPPLHRTTYSGHHTCR 182
KYGQK + ++ FPR+YYRCT C K V+R DP + TTY G HT +
Sbjct: 655 KYGQKAVKNSPFPRSYYRCT---SVSCNVKKHVERSLSDPTIVVTTYEGKHTSK 807
>TC80208 similar to GP|17064158|gb|AAL35286.1 WRKY transcription factor 28
{Arabidopsis thaliana}, partial (31%)
Length = 1294
Score = 69.3 bits (168), Expect = 2e-12
Identities = 39/96 (40%), Positives = 57/96 (58%), Gaps = 1/96 (1%)
Frame = +1
Query: 85 EDSLESNCKSSIVKERRGCYKRRKISQTWEKESEQPE-EDGHQWRKYGQKKILHTDFPRN 143
E S N K V +++G K+++ + +SE + EDG++WRKYGQK + ++ +PR+
Sbjct: 502 ESSKNGNNK---VDKKKGEKKQKEPRFAFMTKSEVDQLEDGYRWRKYGQKAVKNSPYPRS 672
Query: 144 YYRCTHKNDQGCKAIKQVQRIQEDPPLHRTTYSGHH 179
YYRCT Q C K+V+R EDP TTY G H
Sbjct: 673 YYRCT---TQKCTVKKRVERSYEDPTTVITTYEGQH 771
>TC88395 similar to SP|Q9LP56|WR65_ARATH Probable WRKY transcription factor
65 (WRKY DNA-binding protein 65). [Mouse-ear cress],
partial (43%)
Length = 1086
Score = 68.9 bits (167), Expect = 2e-12
Identities = 47/141 (33%), Positives = 64/141 (45%), Gaps = 7/141 (4%)
Frame = +2
Query: 85 EDSLESNCKSSIVKERRGCYKR-------RKISQTWEKESEQPEEDGHQWRKYGQKKILH 137
+ S+ S+ SS K RR KR + ES P D WRKYGQK I
Sbjct: 119 DGSVTSHSSSSSKKSRRAIQKRVVQIPIKEPHGSRLKGESNTPPSDSWAWRKYGQKPIKG 298
Query: 138 TDFPRNYYRCTHKNDQGCKAIKQVQRIQEDPPLHRTTYSGHHTCRILQNPEIIVDYPTDH 197
+ +PR YYRC+ + +GC A KQV+R + DP + TYS H +P
Sbjct: 299 SPYPRAYYRCS--SCKGCPARKQVERSRVDPTMLIITYSSDHNHA----------WPVSK 442
Query: 198 SSMFLSFDNSFPTPAKQDCPF 218
++ LS + P P + D F
Sbjct: 443 TTTRLSLKKTEPDPVEPDEKF 505
>TC81471 similar to PIR|A84913|A84913 probable WRKY-type DNA binding protein
[imported] - Arabidopsis thaliana, partial (43%)
Length = 1274
Score = 68.6 bits (166), Expect = 3e-12
Identities = 36/95 (37%), Positives = 51/95 (52%), Gaps = 12/95 (12%)
Frame = +2
Query: 98 KERRGCYKRRKISQTWEKESEQPE------------EDGHQWRKYGQKKILHTDFPRNYY 145
+E++ K+ K +T K +P EDG++WRKYGQK + ++ FPR+YY
Sbjct: 449 EEKQKTNKQLKTKKTNLKRQREPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYY 628
Query: 146 RCTHKNDQGCKAIKQVQRIQEDPPLHRTTYSGHHT 180
RCT C K+V+R DP + TTY G HT
Sbjct: 629 RCT---TASCNVKKRVERSYTDPSIVVTTYEGQHT 724
>TC92972 similar to GP|9187622|emb|CAB97004.1 WRKY DNA binding protein
{Solanum tuberosum}, partial (46%)
Length = 672
Score = 67.0 bits (162), Expect = 8e-12
Identities = 37/110 (33%), Positives = 58/110 (52%)
Frame = +2
Query: 70 NNPTSEGSDMQLTKSEDSLESNCKSSIVKERRGCYKRRKISQTWEKESEQPEEDGHQWRK 129
N GS++ + +E ++S K + K + + QT + +DG +WRK
Sbjct: 80 NVKPGNGSNIHVKIAEYLKTKKKETSSQKGGKEIMKHKYVFQT--RSQIDILDDGFRWRK 253
Query: 130 YGQKKILHTDFPRNYYRCTHKNDQGCKAIKQVQRIQEDPPLHRTTYSGHH 179
YG+K + FPR+YY+CT+ QGCK KQ+QR +D + T+Y G H
Sbjct: 254 YGEKMVKDNKFPRSYYKCTY---QGCKVKKQIQRHSKDEQVVETSYEGMH 394
>TC79565 similar to SP|Q9ZQ70|WRK3_ARATH Probable WRKY transcription factor 3
(WRKY DNA-binding protein 3). [Mouse-ear cress], partial
(35%)
Length = 1602
Score = 65.1 bits (157), Expect = 3e-11
Identities = 32/88 (36%), Positives = 47/88 (53%)
Frame = +2
Query: 122 EDGHQWRKYGQKKILHTDFPRNYYRCTHKNDQGCKAIKQVQRIQEDPPLHRTTYSGHHTC 181
EDG++WRKYGQK + +PR+YY+CT GC K V+R+ DP TTY G H
Sbjct: 1073 EDGYRWRKYGQKVVKGNPYPRSYYKCT---TPGCNVRKHVERVSTDPKAVLTTYEGKHNH 1243
Query: 182 RILQNPEIIVDYPTDHSSMFLSFDNSFP 209
+ + +++S+ L N+ P
Sbjct: 1244 DVPAAKTNSHNLASNNSASQLKSQNAIP 1327
Score = 59.3 bits (142), Expect = 2e-09
Identities = 25/62 (40%), Positives = 38/62 (60%)
Frame = +2
Query: 118 EQPEEDGHQWRKYGQKKILHTDFPRNYYRCTHKNDQGCKAIKQVQRIQEDPPLHRTTYSG 177
++ +DG+ WRKYGQK++ +FPR+YY+CTH + C K+V+R D + Y G
Sbjct: 662 DKANDDGYNWRKYGQKQVKGCEFPRSYYKCTHPS---CLVTKKVERDPVDGHVTAIIYKG 832
Query: 178 HH 179
H
Sbjct: 833 EH 838
>AL371844 similar to GP|17064164|gb| WRKY transcription factor 41
{Arabidopsis thaliana}, partial (16%)
Length = 442
Score = 64.3 bits (155), Expect = 5e-11
Identities = 28/54 (51%), Positives = 34/54 (62%)
Frame = -3
Query: 142 RNYYRCTHKNDQGCKAIKQVQRIQEDPPLHRTTYSGHHTCRILQNPEIIVDYPT 195
R YYRCTH+N QGC A KQVQR EDP + TY G HTC Q + ++P+
Sbjct: 383 RGYYRCTHRNGQGCLATKQVQRSDEDPTIIEVTYRGRHTCTHSQAKPLKREFPS 222
>TC86084 similar to GP|21537078|gb|AAM61419.1 putaive DNA-binding protein
{Arabidopsis thaliana}, partial (56%)
Length = 1372
Score = 63.5 bits (153), Expect = 9e-11
Identities = 33/94 (35%), Positives = 47/94 (49%)
Frame = +3
Query: 86 DSLESNCKSSIVKERRGCYKRRKISQTWEKESEQPEEDGHQWRKYGQKKILHTDFPRNYY 145
D + + K VK R+ KR ++ D + WRKYGQK I + +PR YY
Sbjct: 762 DDVSGSNKCHCVKRRKNRVKRTVRVPAISSKTADIPPDEYSWRKYGQKPIKGSPYPRGYY 941
Query: 146 RCTHKNDQGCKAIKQVQRIQEDPPLHRTTYSGHH 179
+C+ +GC A K V+R +DP + TY G H
Sbjct: 942 KCS--TVRGCPARKHVERATDDPTMLIVTYEGEH 1037
>TC87470 similar to SP|Q9LP56|WR65_ARATH Probable WRKY transcription factor
65 (WRKY DNA-binding protein 65). [Mouse-ear cress],
partial (31%)
Length = 1057
Score = 63.2 bits (152), Expect = 1e-10
Identities = 38/98 (38%), Positives = 53/98 (53%), Gaps = 4/98 (4%)
Frame = +3
Query: 86 DSLESNCKSSIVK---ERRGCYKRR-KISQTWEKESEQPEEDGHQWRKYGQKKILHTDFP 141
DS+ SN + S + +RRG KR +I + + P D WRKYGQK I + +P
Sbjct: 192 DSIPSNMERSSLSSSAKRRGIKKRVVEIPMKNVEGTNTPPSDSWAWRKYGQKPIKGSPYP 371
Query: 142 RNYYRCTHKNDQGCKAIKQVQRIQEDPPLHRTTYSGHH 179
R YYRC+ + + C A KQV+R DP + TY+ H
Sbjct: 372 RGYYRCS--SSKNCPARKQVERNHMDPTVLLVTYTSDH 479
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.314 0.133 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,213,605
Number of Sequences: 36976
Number of extensions: 165965
Number of successful extensions: 807
Number of sequences better than 10.0: 85
Number of HSP's better than 10.0 without gapping: 761
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 773
length of query: 283
length of database: 9,014,727
effective HSP length: 95
effective length of query: 188
effective length of database: 5,502,007
effective search space: 1034377316
effective search space used: 1034377316
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 58 (26.9 bits)
Medicago: description of AC146784.5