TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146784.12 - phase: 0 /pseudo
         (60 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

AW774987                                                               25  6.0

>AW774987 
          Length = 587

 Score = 25.0 bits (53), Expect = 6.0
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = -1

Query: 5   FRERSNIVLDCFSCLDSKNSFSKFDVDKLARLADIYHV 42
           F E+ NI++DC   L SK +    +   + R+ +I++V
Sbjct: 482 FLEKKNIIIDCQVILLSKYNDRPLEKGIIYRVKNIFYV 369


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.326    0.141    0.420 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,765,360
Number of Sequences: 36976
Number of extensions: 15827
Number of successful extensions: 149
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 149
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 149
length of query: 60
length of database: 9,014,727
effective HSP length: 36
effective length of query: 24
effective length of database: 7,683,591
effective search space: 184406184
effective search space used: 184406184
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 51 (24.3 bits)