BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146776.3 - phase: 0
(286 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC85932 homologue to GP|10177452|dbj|BAB10843. hypersensitive-in... 541 e-155
TC85815 homologue to GP|3928150|emb|CAA10289.1 hypothetical prot... 477 e-135
TC85931 similar to GP|10177452|dbj|BAB10843. hypersensitive-indu... 402 e-113
TC87604 similar to GP|9758199|dbj|BAB08673.1 gb|AAF03497.1~gene_... 328 2e-90
BQ079371 similar to GP|7716470|gb|A hypersensitive-induced respo... 131 3e-31
TC85816 similar to GP|15021744|gb|AAK77899.1 root nodule extensi... 87 1e-17
TC89056 similar to GP|12751303|gb|AAK07610.1 prohibitin 1-like p... 49 3e-06
TC85287 similar to SP|O50008|METE_ARATH 5-methyltetrahydropteroy... 46 2e-05
TC82371 similar to GP|16323442|gb|AAL15215.1 unknown protein {Ar... 35 0.033
TC77808 similar to PIR|T03843|T03843 prohibitin - common tobacco... 35 0.043
TC86719 similar to GP|599956|emb|CAA83434.1| chloroplast inner m... 31 0.62
TC84242 similar to GP|21554710|gb|AAM63667.1 unknown {Arabidopsi... 30 1.1
CB893526 similar to GP|12751303|gb| prohibitin 1-like protein {B... 28 4.0
TC93646 similar to PIR|T10585|T10585 serine proteinase homolog F... 28 4.0
AL381276 similar to GP|2582388|gb| prohibitin {Pneumocystis cari... 27 6.9
BG644990 weakly similar to PIR|T01906|T0 hypothetical protein T1... 27 9.0
>TC85932 homologue to GP|10177452|dbj|BAB10843. hypersensitive-induced
response protein {Arabidopsis thaliana}, partial (98%)
Length = 1555
Score = 541 bits (1395), Expect = e-155
Identities = 277/286 (96%), Positives = 280/286 (97%)
Frame = +2
Query: 1 MGNLVCCVQVDQSQVAMKEGFGKFEKVLQPGCHCMPWFLGKRIAGHLSLRVQQLDIKCET 60
MGNL+CCVQVDQS VAMKEGFGKFE+VLQPGCHCMPWFLGKRIAGHLSLR+QQLDIKCET
Sbjct: 269 MGNLLCCVQVDQSTVAMKEGFGKFEEVLQPGCHCMPWFLGKRIAGHLSLRLQQLDIKCET 448
Query: 61 KTKDNVFVNVVASIQYRALADKANDAFYKLSNTRNQIQAYVFDVIRASVPKLNLDDTFEQ 120
KTKDNVFVNVVASIQYRALAD ANDAFYKLSNTR QIQAYVFDVIRASVPKL LDD FEQ
Sbjct: 449 KTKDNVFVNVVASIQYRALADNANDAFYKLSNTRGQIQAYVFDVIRASVPKLYLDDAFEQ 628
Query: 121 KNEIAKAVEEELEKAMSAYGYEIVQTLITDIEPDVHVKRAMNEINAAARMRLAAKEKAEA 180
KNEIAKAVEEELEKAMSAYGYEIVQTLITDIEPD HVKRAMNEINAAARMRLAAKEKAEA
Sbjct: 629 KNEIAKAVEEELEKAMSAYGYEIVQTLITDIEPDDHVKRAMNEINAAARMRLAAKEKAEA 808
Query: 181 EKILQIKRAEGEAESKYLSGLGIARQRQAIVDGLRDSVIGFSVNVPGTTAKDVMDMVLVT 240
EKILQIKRAEGEAESKYLSGLGIARQRQAIVDGLRDSVIGFSVNVPGTTAKDVMDMVLVT
Sbjct: 809 EKILQIKRAEGEAESKYLSGLGIARQRQAIVDGLRDSVIGFSVNVPGTTAKDVMDMVLVT 988
Query: 241 QYFDTMKEIGAASKSSAVFIPHGPGAVRDVASQIRDGLLQGSLSHQ 286
QYFDTMKEIGAASKSSAVFIPHGPGAVRDVASQIRDGLLQGSLSHQ
Sbjct: 989 QYFDTMKEIGAASKSSAVFIPHGPGAVRDVASQIRDGLLQGSLSHQ 1126
>TC85815 homologue to GP|3928150|emb|CAA10289.1 hypothetical protein {Cicer
arietinum}, complete
Length = 1245
Score = 477 bits (1227), Expect = e-135
Identities = 241/285 (84%), Positives = 264/285 (92%)
Frame = +1
Query: 1 MGNLVCCVQVDQSQVAMKEGFGKFEKVLQPGCHCMPWFLGKRIAGHLSLRVQQLDIKCET 60
MG + CVQVDQS VA+KE FGKF VL+PGCHC+PW LG +IAG LSLRVQQLD+KCET
Sbjct: 133 MGQALGCVQVDQSNVAIKEHFGKFADVLEPGCHCLPWCLGYQIAGGLSLRVQQLDVKCET 312
Query: 61 KTKDNVFVNVVASIQYRALADKANDAFYKLSNTRNQIQAYVFDVIRASVPKLNLDDTFEQ 120
KTKDNVFVNVVAS+QYRA+ADKA+DAFY+L+NTR QIQ+YVFDVIRASVPKL LD FEQ
Sbjct: 313 KTKDNVFVNVVASVQYRAVADKASDAFYRLTNTREQIQSYVFDVIRASVPKLELDAVFEQ 492
Query: 121 KNEIAKAVEEELEKAMSAYGYEIVQTLITDIEPDVHVKRAMNEINAAARMRLAAKEKAEA 180
KN+IAKAVEEELEKAMS YGY+IVQTLI DIEPDV+VKRAMNEINAAARMRLAA EKAEA
Sbjct: 493 KNDIAKAVEEELEKAMSMYGYQIVQTLIVDIEPDVNVKRAMNEINAAARMRLAANEKAEA 672
Query: 181 EKILQIKRAEGEAESKYLSGLGIARQRQAIVDGLRDSVIGFSVNVPGTTAKDVMDMVLVT 240
EKILQIK+AEGEAESKYLSGLGIARQRQAIVDGLRDSV+ FS NVPGTTAKDVMDMVLVT
Sbjct: 673 EKILQIKKAEGEAESKYLSGLGIARQRQAIVDGLRDSVLAFSENVPGTTAKDVMDMVLVT 852
Query: 241 QYFDTMKEIGAASKSSAVFIPHGPGAVRDVASQIRDGLLQGSLSH 285
QYFDTMKEIGA+SKSS+VFIPHGPGAVRD+A QIRDGLLQG+ ++
Sbjct: 853 QYFDTMKEIGASSKSSSVFIPHGPGAVRDIAVQIRDGLLQGNAAN 987
>TC85931 similar to GP|10177452|dbj|BAB10843. hypersensitive-induced
response protein {Arabidopsis thaliana}, partial (71%)
Length = 779
Score = 402 bits (1034), Expect = e-113
Identities = 204/204 (100%), Positives = 204/204 (100%)
Frame = +1
Query: 1 MGNLVCCVQVDQSQVAMKEGFGKFEKVLQPGCHCMPWFLGKRIAGHLSLRVQQLDIKCET 60
MGNLVCCVQVDQSQVAMKEGFGKFEKVLQPGCHCMPWFLGKRIAGHLSLRVQQLDIKCET
Sbjct: 166 MGNLVCCVQVDQSQVAMKEGFGKFEKVLQPGCHCMPWFLGKRIAGHLSLRVQQLDIKCET 345
Query: 61 KTKDNVFVNVVASIQYRALADKANDAFYKLSNTRNQIQAYVFDVIRASVPKLNLDDTFEQ 120
KTKDNVFVNVVASIQYRALADKANDAFYKLSNTRNQIQAYVFDVIRASVPKLNLDDTFEQ
Sbjct: 346 KTKDNVFVNVVASIQYRALADKANDAFYKLSNTRNQIQAYVFDVIRASVPKLNLDDTFEQ 525
Query: 121 KNEIAKAVEEELEKAMSAYGYEIVQTLITDIEPDVHVKRAMNEINAAARMRLAAKEKAEA 180
KNEIAKAVEEELEKAMSAYGYEIVQTLITDIEPDVHVKRAMNEINAAARMRLAAKEKAEA
Sbjct: 526 KNEIAKAVEEELEKAMSAYGYEIVQTLITDIEPDVHVKRAMNEINAAARMRLAAKEKAEA 705
Query: 181 EKILQIKRAEGEAESKYLSGLGIA 204
EKILQIKRAEGEAESKYLSGLGIA
Sbjct: 706 EKILQIKRAEGEAESKYLSGLGIA 777
>TC87604 similar to GP|9758199|dbj|BAB08673.1
gb|AAF03497.1~gene_id:K17N15.12~similar to unknown
protein {Arabidopsis thaliana}, partial (96%)
Length = 1194
Score = 328 bits (840), Expect = 2e-90
Identities = 162/284 (57%), Positives = 215/284 (75%), Gaps = 2/284 (0%)
Frame = +3
Query: 1 MGNLVC--CVQVDQSQVAMKEGFGKFEKVLQPGCHCMPWFLGKRIAGHLSLRVQQLDIKC 58
MGN C C V+QS V + E +G+F++V QPG F G+ +AG LS R+ LD+K
Sbjct: 129 MGNTFCLFCGCVEQSSVGIVEQWGRFQRVAQPGFQIFNPFAGECLAGILSTRIASLDVKI 308
Query: 59 ETKTKDNVFVNVVASIQYRALADKANDAFYKLSNTRNQIQAYVFDVIRASVPKLNLDDTF 118
ETKTKDNVFV ++ SIQYR + + A+DAFY+L N + QIQAYVFDV RA VPK+NLD+ F
Sbjct: 309 ETKTKDNVFVQLLCSIQYRVVKENADDAFYELQNPQEQIQAYVFDVARAIVPKMNLDELF 488
Query: 119 EQKNEIAKAVEEELEKAMSAYGYEIVQTLITDIEPDVHVKRAMNEINAAARMRLAAKEKA 178
EQK E+AK V EEL K M YGY I L+ DI PD V+RAMNEINAA R+ LA++ K
Sbjct: 489 EQKGEVAKGVMEELGKVMGEYGYSIEHILMVDIIPDPSVRRAMNEINAAQRLLLASEFKG 668
Query: 179 EAEKILQIKRAEGEAESKYLSGLGIARQRQAIVDGLRDSVIGFSVNVPGTTAKDVMDMVL 238
EA+K+L +K+AE EAESK+L G+G+ARQRQAI DGLR++++ FS V GT+AK+VMD+++
Sbjct: 669 EADKVLIVKKAEAEAESKFLGGVGVARQRQAITDGLRENILQFSNKVEGTSAKEVMDLIM 848
Query: 239 VTQYFDTMKEIGAASKSSAVFIPHGPGAVRDVASQIRDGLLQGS 282
+TQYFDT++++G SK++ VFIPHGPG VRD+ QIR+G+++ S
Sbjct: 849 ITQYFDTIRDLGNNSKNTTVFIPHGPGHVRDIGDQIRNGMMEAS 980
>BQ079371 similar to GP|7716470|gb|A hypersensitive-induced response protein
{Zea mays}, partial (21%)
Length = 397
Score = 131 bits (329), Expect = 3e-31
Identities = 59/63 (93%), Positives = 62/63 (97%)
Frame = +2
Query: 1 MGNLVCCVQVDQSQVAMKEGFGKFEKVLQPGCHCMPWFLGKRIAGHLSLRVQQLDIKCET 60
MGNL+CCVQVDQS VAMKEGFGKFE+VLQPGCHCMPWFLGKRIAGHLSLR+QQLDIKCET
Sbjct: 77 MGNLLCCVQVDQSTVAMKEGFGKFEEVLQPGCHCMPWFLGKRIAGHLSLRLQQLDIKCET 256
Query: 61 KTK 63
KTK
Sbjct: 257 KTK 265
>TC85816 similar to GP|15021744|gb|AAK77899.1 root nodule extensin {Pisum
sativum}, partial (32%)
Length = 603
Score = 86.7 bits (213), Expect = 1e-17
Identities = 41/49 (83%), Positives = 47/49 (95%)
Frame = +2
Query: 237 VLVTQYFDTMKEIGAASKSSAVFIPHGPGAVRDVASQIRDGLLQGSLSH 285
VLVTQYFDTMKEIGA+SKSS+VFIPHGPGAVRD+A QIRDGLLQG+ ++
Sbjct: 200 VLVTQYFDTMKEIGASSKSSSVFIPHGPGAVRDIAVQIRDGLLQGNAAN 346
>TC89056 similar to GP|12751303|gb|AAK07610.1 prohibitin 1-like protein
{Brassica napus}, partial (96%)
Length = 1131
Score = 48.5 bits (114), Expect = 3e-06
Identities = 45/189 (23%), Positives = 81/189 (42%), Gaps = 6/189 (3%)
Frame = +1
Query: 22 GKFEKVLQPGCHCM-PWFLGKRIAGHLSLRVQQLDIKCETKTKDNVFVNVVASIQYRALA 80
G +KV G H M PWF I +R + ++ + ++D V + + R +
Sbjct: 244 GVKDKVYPEGTHIMIPWFERPVI---YDVRARPHLVESTSGSRDLQMVKIGLRVLTRPVP 414
Query: 81 DKANDAFYKLSNTRNQ--IQAYVFDVIRASVPKLNLDDTFEQKNEIAKAVEEELEKAMSA 138
D+ + L N+ + + + + +++ V + N Q+ +++ + + L + S
Sbjct: 415 DQLPTVYRTLGENYNERVLPSIIHETLKSVVAQYNASQLITQREAVSREIRKILTERASQ 594
Query: 139 YGYEIVQTLITDIEPDVHVKRAMNEINAAARMRLAAK---EKAEAEKILQIKRAEGEAES 195
+ + IT + A+ AA+ AK EKAE +K I RA+GEA S
Sbjct: 595 FNIALDDVSITSLTFGREFTAAIEAKQVAAQEAERAKFVVEKAEQDKRSAIIRAQGEATS 774
Query: 196 KYLSGLGIA 204
L G IA
Sbjct: 775 AQLIGQAIA 801
>TC85287 similar to SP|O50008|METE_ARATH
5-methyltetrahydropteroyltriglutamate--homocysteine
methyltransferase (EC 2.1.1.14), complete
Length = 3967
Score = 45.8 bits (107), Expect = 2e-05
Identities = 43/189 (22%), Positives = 81/189 (42%), Gaps = 6/189 (3%)
Frame = +3
Query: 22 GKFEKVLQPGCH-CMPWFLGKRIAGHLSLRVQQLDIKCETKTKDNVFVNVVASIQYRALA 80
G +KV G H +PWF I +R + ++ + ++D V + + R L
Sbjct: 246 GVKDKVYPEGTHFVIPWFERPVI---YDVRARPHLVESTSGSRDLQMVKIGLRVLTRPLP 416
Query: 81 DKANDAFYKLSNTRNQ--IQAYVFDVIRASVPKLNLDDTFEQKNEIAKAVEEELEKAMSA 138
+ + L N+ + + + + ++A V + N Q+ +++ + + L + +
Sbjct: 417 GQLPTVYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQREAVSREIRKILTERAAN 596
Query: 139 YGYEIVQTLITDIEPDVHVKRAMNEINAAARMRLAAK---EKAEAEKILQIKRAEGEAES 195
+ + IT + A+ AA+ AK EKAE +K + RA+GEA+S
Sbjct: 597 FNIALDDVSITSLTFGKEFTAAIEAKQVAAQEAERAKFVVEKAEQDKRSAVIRAQGEAKS 776
Query: 196 KYLSGLGIA 204
L G IA
Sbjct: 777 AQLIGQAIA 803
>TC82371 similar to GP|16323442|gb|AAL15215.1 unknown protein {Arabidopsis
thaliana}, partial (29%)
Length = 599
Score = 35.0 bits (79), Expect = 0.033
Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 1/113 (0%)
Frame = +2
Query: 10 VDQSQVAMKEGFGKFEKVLQPGCHCMPWFLGKRIAGHLSLRVQQLDIKCETK-TKDNVFV 68
V + + + E FGK+ K L G H + L RIA SL+ + + I ++ TKDNV +
Sbjct: 239 VPEKKAFVIERFGKYVKTLPSGIHFLV-PLVDRIAYVHSLKEEAISIPDQSAITKDNVTI 415
Query: 69 NVVASIQYRALADKANDAFYKLSNTRNQIQAYVFDVIRASVPKLNLDDTFEQK 121
++ + Y + D A Y + N + +R+ + K+ LD TF K
Sbjct: 416 -LIDGVLYVKIVD-PKLASYGVENPLYAVIQLAQTTMRSELGKITLDKTFAGK 568
>TC77808 similar to PIR|T03843|T03843 prohibitin - common tobacco, partial
(96%)
Length = 1202
Score = 34.7 bits (78), Expect = 0.043
Identities = 27/116 (23%), Positives = 52/116 (44%), Gaps = 10/116 (8%)
Frame = +3
Query: 103 DVIRASVPKLNLDDTFEQKNEIAKAVEEELEKAMSAYGYEIVQTLITDIEPDVHVKRAMN 162
+V++A V + N D + +++ V + L + + + IT + RA+
Sbjct: 456 EVLKAVVAQFNADQLLTDRPQVSALVRDSLVRRAKDFNILLDDVAITHLSYGGEFSRAVE 635
Query: 163 EINAAARMRLAAK---EKAEAEKILQIKRAEGEAESKYL-------SGLGIARQRQ 208
+ A + +K KAE E+ I RAEGE+++ L +G+G+ R+
Sbjct: 636 QKQVAQQEAERSKFVVMKAEQERRAAIIRAEGESDAAKLISDATAVAGMGLIELRR 803
>TC86719 similar to GP|599956|emb|CAA83434.1| chloroplast inner membrane
protein {Pisum sativum}, partial (63%)
Length = 2950
Score = 30.8 bits (68), Expect = 0.62
Identities = 29/105 (27%), Positives = 47/105 (44%), Gaps = 12/105 (11%)
Frame = +3
Query: 90 LSNTRNQIQAYVFDVIRASV--PKLNLDDTFEQKNE-IAKAVEEELEKAMSAYGY----- 141
+S QI+ ++++S PKLNLD T ++ E + K V++EL +A A G
Sbjct: 1572 VSEVEVQIEKLKQQILKSSSQPPKLNLDKTIKKLEEKLEKEVDQELSEAAKALGLTQSLS 1751
Query: 142 ----EIVQTLITDIEPDVHVKRAMNEINAAARMRLAAKEKAEAEK 182
E + D D +K + ++ A RL+A A K
Sbjct: 1752 KLRDEFSKASSDDQPLDPLLKGKIEKLQADFNRRLSAAPNANKLK 1886
>TC84242 similar to GP|21554710|gb|AAM63667.1 unknown {Arabidopsis
thaliana}, partial (55%)
Length = 658
Score = 30.0 bits (66), Expect = 1.1
Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Frame = +3
Query: 166 AAARMRLAAKEKAEAEKILQIKRAEGE-AESKYLSGLGIARQRQ 208
AA ++RLAA EKA AE++ ++ R E E A+S++ AR RQ
Sbjct: 261 AAEQIRLAAMEKAYAERVRELTRREMEMAQSEF------ARARQ 374
>CB893526 similar to GP|12751303|gb| prohibitin 1-like protein {Brassica
napus}, partial (14%)
Length = 127
Score = 28.1 bits (61), Expect = 4.0
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +2
Query: 176 EKAEAEKILQIKRAEGEAESKYLSG 200
EKAE EK + RA+GEA+S L G
Sbjct: 47 EKAEQEKRSAVTRAQGEAKSAQLIG 121
>TC93646 similar to PIR|T10585|T10585 serine proteinase homolog F9F13.80 -
Arabidopsis thaliana, partial (25%)
Length = 720
Score = 28.1 bits (61), Expect = 4.0
Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
Frame = +2
Query: 183 ILQIKRAEGEAESKYLSGLGIARQRQAIVDGLRDSVIGFSVN-----VPGTTAKDVMDMV 237
I IKRA A++ +G +V + VIGF +N +PG D
Sbjct: 386 ISTIKRASETAKNHSAAG---------VVFYMDPYVIGFQLNPVAMKMPGIIIPSTNDSK 538
Query: 238 LVTQYFDTMKEIGAASKSSAVF 259
++ QY+++ EI + SK F
Sbjct: 539 ILMQYYNSSLEIDSVSKKVVKF 604
>AL381276 similar to GP|2582388|gb| prohibitin {Pneumocystis carinii},
partial (37%)
Length = 449
Score = 27.3 bits (59), Expect = 6.9
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = +2
Query: 176 EKAEAEKILQIKRAEGEAES 195
EKAE EK I RAEGEAE+
Sbjct: 125 EKAEQEKQAAIIRAEGEAEA 184
>BG644990 weakly similar to PIR|T01906|T0 hypothetical protein T12H20.3 -
Arabidopsis thaliana, partial (12%)
Length = 777
Score = 26.9 bits (58), Expect = 9.0
Identities = 16/81 (19%), Positives = 37/81 (44%)
Frame = +1
Query: 140 GYEIVQTLITDIEPDVHVKRAMNEINAAARMRLAAKEKAEAEKILQIKRAEGEAESKYLS 199
G+E +T++ + +H+ + + + ++ A+E E +L +K + S +
Sbjct: 313 GFEFPETIMVFTKEQIHILCSQKKASILESVKKPARESVGVEIVLHVKPKNDDGAS-LMD 489
Query: 200 GLGIARQRQAIVDGLRDSVIG 220
+ A + Q+ DG S +G
Sbjct: 490 AIIRAIRTQSKSDGHDSSTVG 552
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.318 0.133 0.370
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,240,587
Number of Sequences: 36976
Number of extensions: 63375
Number of successful extensions: 344
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 342
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 344
length of query: 286
length of database: 9,014,727
effective HSP length: 95
effective length of query: 191
effective length of database: 5,502,007
effective search space: 1050883337
effective search space used: 1050883337
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)
Medicago: description of AC146776.3