BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146760.4 + phase: 0
(303 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BE124666 similar to PIR|JQ0957|JQ0 myb-related protein 330 - gar... 207 5e-54
TC88523 similar to PIR|T05690|T05690 myb-related transcription f... 206 1e-53
BF643814 similar to GP|19386839|db putative myb-related protein ... 196 7e-51
BG448527 similar to PIR|T51509|T51 probable transcription factor... 194 5e-50
TC81520 similar to PIR|D86470|D86470 hypothetical protein AAD460... 191 3e-49
TC86588 similar to GP|5139814|dbj|BAA81736.1 GmMYB29B2 {Glycine ... 188 2e-48
TC88428 homologue to PIR|T07393|T07393 myb-related transcription... 184 3e-47
TC77877 similar to GP|5139806|dbj|BAA81732.1 GmMYB29A2 {Glycine ... 182 2e-46
TC81202 homologue to GP|17380966|gb|AAL36295.1 putative transcri... 174 4e-44
TC84780 homologue to PIR|F85021|F85021 probable transcription fa... 173 6e-44
BI311137 similar to GP|17380966|gb putative transcription factor... 172 1e-43
TC80659 similar to PIR|T48607|T48607 probable transcription fact... 172 2e-43
BF647428 homologue to PIR|T51621|T51 myb-like protein [imported]... 166 1e-41
TC90505 similar to GP|3941528|gb|AAC83640.1| putative transcript... 164 3e-41
TC78268 weakly similar to PIR|B85064|B85064 MYB-like protein [im... 164 4e-41
BQ147051 similar to GP|23476311|gb myb-like transcription factor... 157 6e-41
BG644406 homologue to PIR|T07398|T07 myb-related transcription f... 160 4e-40
TC89556 similar to GP|18419456|gb|AAL69334.1 blind {Lycopersicon... 160 4e-40
TC82254 similar to GP|22266673|dbj|BAC07543. myb-related transcr... 159 1e-39
TC78267 weakly similar to PIR|B85064|B85064 MYB-like protein [im... 159 2e-39
>BE124666 similar to PIR|JQ0957|JQ0 myb-related protein 330 - garden
snapdragon, partial (48%)
Length = 536
Score = 207 bits (526), Expect = 5e-54
Identities = 92/148 (62%), Positives = 113/148 (76%)
Frame = +3
Query: 29 TTTTTPCCSKVGLKRGPWTVEEDEVLSEYIKKEGEGRWRTLPKRAGLLRCGKSCRLRWMN 88
T +PCC K +G WT EEDE L YIK GEG WR+LPK AGLLRCGKSCRLRW+N
Sbjct: 24 TMGRSPCCEKEHTNKGAWTKEEDERLINYIKLHGEGCWRSLPKAAGLLRCGKSCRLRWIN 203
Query: 89 YLRPSVKRGQIAPDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWNTHLSKKLINQ 148
YLRP +KRG E+DLI+ LH LLGN+WSLIA R+PGRTDNEIKNYWNTH+ +KL ++
Sbjct: 204 YLRPDLKRGNFTEQEDDLIINLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLYSR 383
Query: 149 GIDPRTHKPLNNPSSSSSIIPNTNHQTS 176
G+DP+TH+ LN+ ++S++IIP N S
Sbjct: 384 GVDPQTHRSLNDSTTSTTIIPPANAAVS 467
>TC88523 similar to PIR|T05690|T05690 myb-related transcription factor MYB4
- Arabidopsis thaliana, partial (54%)
Length = 1292
Score = 206 bits (523), Expect = 1e-53
Identities = 89/134 (66%), Positives = 108/134 (80%)
Frame = +1
Query: 33 TPCCSKVGLKRGPWTVEEDEVLSEYIKKEGEGRWRTLPKRAGLLRCGKSCRLRWMNYLRP 92
+PCC K +G WT EED+ L YI+ GEG WR+LPK AGLLRCGKSCRLRW+NYLRP
Sbjct: 280 SPCCEKAHTNKGAWTKEEDDRLISYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRP 459
Query: 93 SVKRGQIAPDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWNTHLSKKLINQGIDP 152
+KRG +E++LI++LH LLGN+WSLIAGR+PGRTDNEIKNYWNTH+ +KL+N+GIDP
Sbjct: 460 DLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLNRGIDP 639
Query: 153 RTHKPLNNPSSSSS 166
TH+PLN S S S
Sbjct: 640 ATHRPLNEVSHSQS 681
>BF643814 similar to GP|19386839|db putative myb-related protein {Oryza
sativa (japonica cultivar-group)}, partial (49%)
Length = 545
Score = 196 bits (499), Expect = 7e-51
Identities = 88/165 (53%), Positives = 117/165 (70%)
Frame = +1
Query: 34 PCCSKVGLKRGPWTVEEDEVLSEYIKKEGEGRWRTLPKRAGLLRCGKSCRLRWMNYLRPS 93
PCC K +G W+ EEDE L YIK++GEG WR+LPK AGL RCGKSCRLRW+NYLRP
Sbjct: 1 PCCEKQHTNKGAWSKEEDERLINYIKQQGEGCWRSLPKAAGLARCGKSCRLRWINYLRPD 180
Query: 94 VKRGQIAPDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWNTHLSKKLINQGIDPR 153
+KRG +E++LI+ LH ++GN+WS IA ++PGRTDNEIKNYWNTH+ +KL ++GIDP
Sbjct: 181 LKRGNFTHEEDELIISLHAMVGNKWSQIAQKLPGRTDNEIKNYWNTHIKRKLYSRGIDPT 360
Query: 154 THKPLNNPSSSSSIIPNTNHQTSTPFFAPSSSDHHHPITITNNEP 198
TH+PL S +++ T+ T+T S++ P + NN P
Sbjct: 361 THQPLKTLSGTAAASTGTSSATTT------SAEAASPTMVVNNNP 477
>BG448527 similar to PIR|T51509|T51 probable transcription factor (MYB9) -
Arabidopsis thaliana, partial (40%)
Length = 633
Score = 194 bits (492), Expect = 5e-50
Identities = 86/143 (60%), Positives = 108/143 (75%), Gaps = 3/143 (2%)
Frame = +1
Query: 33 TPCCSKVGLKRGPWTVEEDEVLSEYIKKEGEGRWRTLPKRAGLLRCGKSCRLRWMNYLRP 92
+PCC ++G+K+GPWT EEDE L +YI K G G W TL KRAGL RCGKSCRLRW NYLRP
Sbjct: 49 SPCCDEIGVKKGPWTQEEDEKLIDYINKHGHGNWGTLSKRAGLNRCGKSCRLRWTNYLRP 228
Query: 93 SVKRGQIAPDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWNTHLSKKLINQGIDP 152
+KRG+ +EE +I+ LH +LGN+WS IA +PGRTDNEIKNYWNT++ KKL+ GIDP
Sbjct: 229 DIKRGKFTDEEERVIINLHSVLGNKWSKIAAHLPGRTDNEIKNYWNTNIRKKLLKMGIDP 408
Query: 153 RTHKP---LNNPSSSSSIIPNTN 172
THKP N+ S S+++ +N
Sbjct: 409 ETHKPRTDYNHLMSLSNLLGMSN 477
>TC81520 similar to PIR|D86470|D86470 hypothetical protein AAD46010.1
[imported] - Arabidopsis thaliana, partial (39%)
Length = 1259
Score = 191 bits (485), Expect = 3e-49
Identities = 83/129 (64%), Positives = 99/129 (76%)
Frame = +2
Query: 29 TTTTTPCCSKVGLKRGPWTVEEDEVLSEYIKKEGEGRWRTLPKRAGLLRCGKSCRLRWMN 88
T +PCC + GLK+GPWT EED+ L E+I++ G G WR LPK AGL RCGKSCRLRW N
Sbjct: 53 TMGRSPCCDESGLKKGPWTPEEDQKLVEHIQQHGHGSWRALPKLAGLNRCGKSCRLRWTN 232
Query: 89 YLRPSVKRGQIAPDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWNTHLSKKLINQ 148
YLRP +KRG+ + +EE IL LH +LGN+WS IA +PGRTDNEIKN+WNTHL KKLI
Sbjct: 233 YLRPDIKRGKFSQEEEQTILHLHSILGNKWSAIATHLPGRTDNEIKNFWNTHLKKKLIQM 412
Query: 149 GIDPRTHKP 157
G DP TH+P
Sbjct: 413 GFDPMTHQP 439
>TC86588 similar to GP|5139814|dbj|BAA81736.1 GmMYB29B2 {Glycine max},
partial (85%)
Length = 1389
Score = 188 bits (478), Expect = 2e-48
Identities = 91/159 (57%), Positives = 113/159 (70%), Gaps = 6/159 (3%)
Frame = +2
Query: 34 PCCSKVGLKRGPWTVEEDEVLSEYIKKEGEGRWRTLPKRAGLLRCGKSCRLRWMNYLRPS 93
PCC K+GLKRGPW++EEDE+L+ YI+K G G WR LPK AGLLRCGKSCRLRW+NYLRP
Sbjct: 119 PCCEKMGLKRGPWSLEEDEILTSYIQKHGHGNWRALPKLAGLLRCGKSCRLRWINYLRPD 298
Query: 94 VKRGQIAPDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWNTHLSKKLINQGIDPR 153
+KRG +EE+ I++LH +LGNRWS IA ++PGRTDNEIKN W+THL KKL NQ
Sbjct: 299 IKRGNFTNEEEENIIKLHEMLGNRWSAIAAKLPGRTDNEIKNVWHTHLKKKL-NQTNSEA 475
Query: 154 THKPLNNP------SSSSSIIPNTNHQTSTPFFAPSSSD 186
K ++ P S+SS+I + + T SSSD
Sbjct: 476 KKKAISKPKIKRSDSNSSTITQSESASACT----TSSSD 580
>TC88428 homologue to PIR|T07393|T07393 myb-related transcription factor -
tomato, partial (52%)
Length = 865
Score = 184 bits (468), Expect = 3e-47
Identities = 89/152 (58%), Positives = 106/152 (69%)
Frame = +3
Query: 34 PCCSKVGLKRGPWTVEEDEVLSEYIKKEGEGRWRTLPKRAGLLRCGKSCRLRWMNYLRPS 93
PCC KVGLK+GPWT EED+ L +I G+ WR +PK AGLLRCGKSCRLRW NYLRP
Sbjct: 153 PCCDKVGLKKGPWTAEEDKKLINFILTNGQCCWRAVPKLAGLLRCGKSCRLRWTNYLRPD 332
Query: 94 VKRGQIAPDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWNTHLSKKLINQGIDPR 153
+KRG ++ EE +++ LH LGNRWS IA +PGRTDNEIKN+WNTH+ KKL GIDP
Sbjct: 333 LKRGLLSEYEEKMVIDLHAQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLKKMGIDPV 512
Query: 154 THKPLNNPSSSSSIIPNTNHQTSTPFFAPSSS 185
THK L+N +II T Q+ SSS
Sbjct: 513 THKLLSN-----AIIEQTQTQSEQEPQQQSSS 593
>TC77877 similar to GP|5139806|dbj|BAA81732.1 GmMYB29A2 {Glycine max},
partial (78%)
Length = 1156
Score = 182 bits (461), Expect = 2e-46
Identities = 75/114 (65%), Positives = 92/114 (79%)
Frame = +3
Query: 34 PCCSKVGLKRGPWTVEEDEVLSEYIKKEGEGRWRTLPKRAGLLRCGKSCRLRWMNYLRPS 93
PCC K GLK+GPWT+EEDE+L+ YI K G WR LPK AGLLRCGKSCRLRW+NYL+P
Sbjct: 78 PCCEKKGLKKGPWTLEEDEILTSYINKHGHSNWRALPKHAGLLRCGKSCRLRWINYLKPD 257
Query: 94 VKRGQIAPDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWNTHLSKKLIN 147
+KRG +EE+ I+++H LGNRWS IA ++PGRTDNEIKN W+THL K+L+N
Sbjct: 258 IKRGNFTNEEEETIIKMHESLGNRWSAIAAKLPGRTDNEIKNVWHTHLKKRLLN 419
>TC81202 homologue to GP|17380966|gb|AAL36295.1 putative transcription
factor {Arabidopsis thaliana}, partial (40%)
Length = 1506
Score = 174 bits (441), Expect = 4e-44
Identities = 83/145 (57%), Positives = 101/145 (69%), Gaps = 3/145 (2%)
Frame = +2
Query: 35 CCSKVGLKRGPWTVEEDEVLSEYIKKEGEGRWRTLPKRAGLLRCGKSCRLRWMNYLRPSV 94
CC K L++G W+ EEDE L YI K G G W ++PK AGL RCGKSCRLRW+NYLRP +
Sbjct: 74 CCYKQKLRKGLWSPEEDEKLLNYITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDL 253
Query: 95 KRGQIAPDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWNTHLSKKLINQGIDPRT 154
KRG + EE+LI+ LH +LGNRWS IA ++PGRTDNEIKN WN+ L K+L GIDP T
Sbjct: 254 KRGAFSQQEENLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCLKKRLRQSGIDPNT 433
Query: 155 HKPLN---NPSSSSSIIPNTNHQTS 176
HKPL+ N + S TN + S
Sbjct: 434 HKPLSEVENDNEKSLTSNKTNQKGS 508
>TC84780 homologue to PIR|F85021|F85021 probable transcription factor
[imported] - Arabidopsis thaliana, partial (39%)
Length = 971
Score = 173 bits (439), Expect = 6e-44
Identities = 81/143 (56%), Positives = 101/143 (69%)
Frame = +1
Query: 35 CCSKVGLKRGPWTVEEDEVLSEYIKKEGEGRWRTLPKRAGLLRCGKSCRLRWMNYLRPSV 94
CC K L++G W+ EEDE L +I K G G W ++PK+AGL RCGKSCRLRW+NYLRP +
Sbjct: 118 CCYKQKLRKGLWSPEEDEKLLNHITKYGHGCWSSVPKQAGLQRCGKSCRLRWINYLRPDL 297
Query: 95 KRGQIAPDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWNTHLSKKLINQGIDPRT 154
KRG + +EE+LI+ LH +LGNRWS IA ++PGRTDNEIKN WN+ L KKL +GIDP T
Sbjct: 298 KRGTFSQEEENLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCLKKKLRQKGIDPVT 477
Query: 155 HKPLNNPSSSSSIIPNTNHQTST 177
HKPL+ + T Q T
Sbjct: 478 HKPLSEVENVDEEEGKTRSQEKT 546
>BI311137 similar to GP|17380966|gb putative transcription factor
{Arabidopsis thaliana}, partial (35%)
Length = 761
Score = 172 bits (436), Expect = 1e-43
Identities = 80/135 (59%), Positives = 98/135 (72%), Gaps = 2/135 (1%)
Frame = +1
Query: 35 CCSKVGLKRGPWTVEEDEVLSEYIKKEGEGRWRTLPKRAGLLRCGKSCRLRWMNYLRPSV 94
CC K L++G W+ EEDE L YI K G G W ++PK AGL RCGKSCRLRW+NYLRP +
Sbjct: 163 CCYKQKLRKGLWSPEEDEKLLNYITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDL 342
Query: 95 KRGQIAPDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWNTHLSKKLINQGIDPRT 154
KRG + EE+ I+ LH LLGNRWS IA ++PGRTDNEIKN WN+ L KKL +GIDP T
Sbjct: 343 KRGAFSEQEENSIIELHALLGNRWSQIAAQLPGRTDNEIKNLWNSSLKKKLKQKGIDPNT 522
Query: 155 HKPL--NNPSSSSSI 167
H+P NN + + +I
Sbjct: 523 HQPFSENNDNDTPNI 567
>TC80659 similar to PIR|T48607|T48607 probable transcription factor MYB40 -
Arabidopsis thaliana, partial (46%)
Length = 1040
Score = 172 bits (435), Expect = 2e-43
Identities = 79/123 (64%), Positives = 90/123 (72%)
Frame = +2
Query: 36 CSKVGLKRGPWTVEEDEVLSEYIKKEGEGRWRTLPKRAGLLRCGKSCRLRWMNYLRPSVK 95
C KVGLKRGPWT+EED L +I G WR +PK AGLLRCGKSCRLRW+NYLRP +K
Sbjct: 14 CDKVGLKRGPWTIEEDHKLVNFILNNGIHCWRMVPKLAGLLRCGKSCRLRWINYLRPDLK 193
Query: 96 RGQIAPDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWNTHLSKKLINQGIDPRTH 155
RG EED I++LH LGNRWS IA PGRTDNEIKN+WNT + KKL G+DP H
Sbjct: 194 RGGFTEIEEDQIIQLHARLGNRWSKIASHFPGRTDNEIKNHWNTKIKKKLKFLGLDPVNH 373
Query: 156 KPL 158
KP+
Sbjct: 374 KPI 382
>BF647428 homologue to PIR|T51621|T51 myb-like protein [imported] -
Arabidopsis thaliana, partial (44%)
Length = 689
Score = 166 bits (420), Expect = 1e-41
Identities = 77/153 (50%), Positives = 95/153 (61%)
Frame = +2
Query: 26 KQKTTTTTPCCSKVGLKRGPWTVEEDEVLSEYIKKEGEGRWRTLPKRAGLLRCGKSCRLR 85
K+K PCC K G+K+GPWT EED +L YI++ G G W+ +P GLLRC KSCRLR
Sbjct: 80 KEKKMVRPPCCDKEGVKKGPWTPEEDIILVSYIQEHGPGNWKAVPTNTGLLRCSKSCRLR 259
Query: 86 WMNYLRPSVKRGQIAPDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWNTHLSKKL 145
W NYLRP +KRG EE +I+ L LLGNRW+ IA +P RTDN+IKNYWNT+L KKL
Sbjct: 260 WTNYLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIAAYLPQRTDNDIKNYWNTYLKKKL 439
Query: 146 INQGIDPRTHKPLNNPSSSSSIIPNTNHQTSTP 178
K L +SS S + + S P
Sbjct: 440 ----------KKLETSTSSESCLGHDEFSVSQP 508
>TC90505 similar to GP|3941528|gb|AAC83640.1| putative transcription factor
{Arabidopsis thaliana}, partial (49%)
Length = 984
Score = 164 bits (416), Expect = 3e-41
Identities = 71/121 (58%), Positives = 86/121 (70%)
Frame = +1
Query: 25 KKQKTTTTTPCCSKVGLKRGPWTVEEDEVLSEYIKKEGEGRWRTLPKRAGLLRCGKSCRL 84
+KQ+ PCC K G+K+GPWT EED +L YI++ G G WR +P + GL RC KSCRL
Sbjct: 142 EKQRNMGRPPCCDKEGVKKGPWTPEEDIILVTYIQEHGPGNWRAVPTKTGLSRCSKSCRL 321
Query: 85 RWMNYLRPSVKRGQIAPDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWNTHLSKK 144
RW NYLRP +KRG EE +I+ L LLGNRW+ IA +P RTDN+IKNYWNTHL KK
Sbjct: 322 RWTNYLRPGIKRGNFTEQEEKMIIHLQDLLGNRWAAIASYLPQRTDNDIKNYWNTHLKKK 501
Query: 145 L 145
L
Sbjct: 502 L 504
>TC78268 weakly similar to PIR|B85064|B85064 MYB-like protein [imported] -
Arabidopsis thaliana, partial (35%)
Length = 888
Score = 164 bits (415), Expect = 4e-41
Identities = 94/250 (37%), Positives = 136/250 (53%), Gaps = 1/250 (0%)
Frame = +1
Query: 6 STDQDKSETTNSNSNSNPNKKQKTTTTTPCCSKVGLKRGPWTVEEDEVLSEYIKKEGEGR 65
S+ +DK + S S+ K K T C K G+++G WT EED L Y+ + G
Sbjct: 13 SSCRDKHTHSLSLSSLVSQKIIKMARTPSCDKKSGMRKGTWTAEEDRKLIAYVTRYGCWN 192
Query: 66 WRTLPKRAGLLRCGKSCRLRWMNYLRPSVKRGQIAPDEEDLILRLHRLLGNRWSLIAGRI 125
WR LPK AGL RCGKSCRLRW+NYLRP++KRG +EE+LI+R+H+ LGNRWS IA +
Sbjct: 193 WRQLPKFAGLSRCGKSCRLRWLNYLRPNIKRGNFTQEEEELIIRMHKKLGNRWSTIAAEL 372
Query: 126 PGRTDNEIKNYWNTHLSKKLINQGI-DPRTHKPLNNPSSSSSIIPNTNHQTSTPFFAPSS 184
PGRTDNE+KN+W+T L K+ I+ + + T S+ I N Q S S
Sbjct: 373 PGRTDNEVKNHWHTSLKKRAIDNIVTNEETKSTQGRCVSNYQITLPANSQISDTNGPLSP 552
Query: 185 SDHHHPITITNNEPDPSQTQQAQGCGNLVNDVSAMDNHHVLTNNNRGDYGDDNGNNNYGG 244
++ T+++ + + + + DV H L+N G ++ ++
Sbjct: 553 FSSSSELSSTSSDHNSTALDDFGFLDSFIEDVDESFWLHNLSNKPSG-IVQNHTTESFVM 729
Query: 245 DDVFTSFLDS 254
D+ F SFLD+
Sbjct: 730 DNDFGSFLDA 759
>BQ147051 similar to GP|23476311|gb myb-like transcription factor 6
{Gossypium hirsutum}, partial (53%)
Length = 445
Score = 157 bits (398), Expect(2) = 6e-41
Identities = 69/109 (63%), Positives = 85/109 (77%)
Frame = +3
Query: 26 KQKTTTTTPCCSKVGLKRGPWTVEEDEVLSEYIKKEGEGRWRTLPKRAGLLRCGKSCRLR 85
KQ T PCC K + +G W+ +ED+ L +YI+ GEG W ++PK AGL RCGKSCRLR
Sbjct: 45 KQ*LTMRKPCCDKENINKGAWSKQEDQKLIDYIQVHGEGCWGSIPKAAGLHRCGKSCRLR 224
Query: 86 WMNYLRPSVKRGQIAPDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIK 134
W+NYLRP +KRG A DEEDLI++LH LLGNRW+LIAGR+PGRTDNE+K
Sbjct: 225 WLNYLRPDIKRGIFAQDEEDLIIKLHALLGNRWALIAGRVPGRTDNEVK 371
Score = 27.3 bits (59), Expect(2) = 6e-41
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = +2
Query: 134 KNYWNTHLSKKLI 146
+NYWN+H+ KKLI
Sbjct: 368 ENYWNSHIRKKLI 406
>BG644406 homologue to PIR|T07398|T07 myb-related transcription factor THM6 -
tomato, partial (42%)
Length = 762
Score = 160 bits (406), Expect = 4e-40
Identities = 67/112 (59%), Positives = 83/112 (73%)
Frame = +1
Query: 34 PCCSKVGLKRGPWTVEEDEVLSEYIKKEGEGRWRTLPKRAGLLRCGKSCRLRWMNYLRPS 93
PCC K G+K+GPWT EED +L ++++ G G WRT+P GL RC KSCRLRW NYLRP
Sbjct: 157 PCCDKTGVKKGPWTPEEDIMLVSFVQEHGPGNWRTVPTHTGLRRCSKSCRLRWTNYLRPG 336
Query: 94 VKRGQIAPDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWNTHLSKKL 145
+KRG EE +I++L LLGN+W+ IA +P RTDN+IKNYWNTHL KKL
Sbjct: 337 IKRGSFTDQEEKMIIQLQALLGNKWAAIASYLPERTDNDIKNYWNTHLKKKL 492
>TC89556 similar to GP|18419456|gb|AAL69334.1 blind {Lycopersicon
esculentum}, partial (37%)
Length = 990
Score = 160 bits (406), Expect = 4e-40
Identities = 77/184 (41%), Positives = 112/184 (60%), Gaps = 1/184 (0%)
Frame = +3
Query: 25 KKQKTTTTTPCCSKVGLKRGPWTVEEDEVLSEYIKKEGEG-RWRTLPKRAGLLRCGKSCR 83
+++K +PCC K +K+GPW+ EED L EYI+K G G W TLPK+ GL RCGKSCR
Sbjct: 3 RREKKMGRSPCCDKANVKKGPWSPEEDAKLKEYIEKHGTGGNWITLPKKVGLTRCGKSCR 182
Query: 84 LRWMNYLRPSVKRGQIAPDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWNTHLSK 143
LRW+NYLRP++K G+ + E+ +I L +G+RWS+IA ++ GRTDN++KNYWNT L K
Sbjct: 183 LRWLNYLRPNIKHGEFSDSEDKIICTLFASIGSRWSIIASKLEGRTDNDVKNYWNTKLKK 362
Query: 144 KLINQGIDPRTHKPLNNPSSSSSIIPNTNHQTSTPFFAPSSSDHHHPITITNNEPDPSQT 203
K+++ H P + + N S+P + ++S + T ++ S T
Sbjct: 363 KIMSM-----NHSVEMKPQQVTLLSILQNSTKSSPSLSFTNSSFSYSSTSSSLLSGNSST 527
Query: 204 QQAQ 207
AQ
Sbjct: 528 SAAQ 539
>TC82254 similar to GP|22266673|dbj|BAC07543. myb-related transcription
factor VlMYBB1-1 {Vitis labrusca x Vitis vinifera},
partial (46%)
Length = 754
Score = 159 bits (403), Expect = 1e-39
Identities = 76/167 (45%), Positives = 104/167 (61%), Gaps = 14/167 (8%)
Frame = +2
Query: 33 TPCCSKVGLKRGPWTVEEDEVLSEYIKKEGEGRWRTLPKRAGLLRCGKSCRLRWMNYLRP 92
TP C K GL++G WT EED+ L Y+ + G WR LPK AGL RCGKSCRLRW+NYLRP
Sbjct: 107 TPYCDKNGLRKGTWTPEEDKKLIAYVTRYGCWNWRQLPKFAGLERCGKSCRLRWLNYLRP 286
Query: 93 SVKRGQIAPDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWNTHLSKKLIN----- 147
+KRG + +EE+ I++LH LGNRW++I+ +PGRTDNEIKNYW+T + K L+
Sbjct: 287 DIKRGSFSHEEEETIIKLHEKLGNRWTMISANLPGRTDNEIKNYWHTTIKKTLVKNKSNT 466
Query: 148 -------QGIDPRTHKPLNNPSSSSSIIPNTN--HQTSTPFFAPSSS 185
+ + + H + P ++ N + + TS P PS+S
Sbjct: 467 KRGTKKAKDSNSKNHPTMEKPKKLGEMLENNSDFNITSPPSSQPSTS 607
>TC78267 weakly similar to PIR|B85064|B85064 MYB-like protein [imported] -
Arabidopsis thaliana, partial (35%)
Length = 869
Score = 159 bits (401), Expect = 2e-39
Identities = 80/178 (44%), Positives = 114/178 (63%), Gaps = 7/178 (3%)
Frame = +2
Query: 33 TPCCSKV-GLKRGPWTVEEDEVLSEYIKKEGEGRWRTLPKRAGLLRCGKSCRLRWMNYLR 91
TP C K+ G+++G WT EED L Y+ + G WR LPK AGL RCGKSCRLRW+NYLR
Sbjct: 101 TPSCDKISGMRKGTWTAEEDRKLIAYVTRYGFWNWRQLPKFAGLSRCGKSCRLRWLNYLR 280
Query: 92 PSVKRGQIAPDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWNTHLSKKLINQGID 151
P+++RG DEE+LI+R+H+ LGN+WS IA +PGRTDNE+KN+W+T L K+ I+ +
Sbjct: 281 PNIRRGNFTKDEEELIIRMHKKLGNKWSTIAAELPGRTDNEVKNHWHTSLKKRAIDNIVT 460
Query: 152 PRTHKPLNNPSSSSSIIPNT------NHQTSTPFFAPSSSDHHHPITITNNEPDPSQT 203
K + S II +T N+Q TP + S+++ P++ ++ + S T
Sbjct: 461 NEETK----STKSKDIIESTQGRDISNYQI-TPPDSSQISNNNGPLSPFSSSSEISST 619
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.311 0.129 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,084,542
Number of Sequences: 36976
Number of extensions: 211186
Number of successful extensions: 1687
Number of sequences better than 10.0: 176
Number of HSP's better than 10.0 without gapping: 1548
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1638
length of query: 303
length of database: 9,014,727
effective HSP length: 96
effective length of query: 207
effective length of database: 5,465,031
effective search space: 1131261417
effective search space used: 1131261417
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 58 (26.9 bits)
Medicago: description of AC146760.4