
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146759.1 + phase: 0 /pseudo
(188 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC87746 similar to GP|15021761|gb|AAK77908.1 AAA-metalloprotease... 87 2e-25
TC92976 similar to GP|15021761|gb|AAK77908.1 AAA-metalloprotease... 87 3e-18
BG588188 weakly similar to GP|20260382|gb| unknown protein {Arab... 30 0.72
TC76803 PIR|T09622|T09622 protein kinase MMK4 (EC 2.7.1.-) cold... 28 2.1
TC84968 28 2.8
TC83711 weakly similar to GP|14279437|gb|AAK58599.1 ethylene-ind... 27 3.6
AW687281 weakly similar to SP|Q9LSU3|PSA6 Proteasome subunit alp... 27 6.1
TC89618 weakly similar to PIR|T05940|T05940 cytochrome P450 83D1... 27 6.1
AW586898 27 6.1
TC78929 similar to GP|1946358|gb|AAB63076.1| unknown protein {Ar... 27 6.1
BM779623 weakly similar to GP|6118407|gb| flavone synthase II {C... 27 6.1
BG588627 homologue to GP|21740798|emb OSJNBb0091E11.12 {Oryza sa... 26 8.0
TC91597 similar to GP|21323350|dbj|BAB97978. Hypothetical protei... 26 8.0
>TC87746 similar to GP|15021761|gb|AAK77908.1 AAA-metalloprotease FtsH
{Pisum sativum}, partial (49%)
Length = 1274
Score = 86.7 bits (213), Expect(2) = 2e-25
Identities = 57/112 (50%), Positives = 72/112 (63%), Gaps = 18/112 (16%)
Frame = +2
Query: 23 GSFQEA-LKKLGTLMT--LIGGLILSFFYFRPFGKNQEISFQEFKIKVLEPGLVDHIVVS 79
GSF EA +K+ +T L+ GL LS P + Q+ISFQEFK K+LEPGLVDHIVVS
Sbjct: 446 GSFHEAFIKQFQNYLTPLLVVGLFLSSLSLGPRDQ-QQISFQEFKNKLLEPGLVDHIVVS 622
Query: 80 NKELAKIYVKNN-----ESEV----------AKYKYYFKIGSVDSFERKLKK 116
NK +AKIYV+N+ +SEV +YKY IGSV+SFE KL++
Sbjct: 623 NKSVAKIYVRNSPLNQADSEVQGTLPAKGSGGQYKYIINIGSVESFEEKLEE 778
Score = 45.4 bits (106), Expect(2) = 2e-25
Identities = 37/86 (43%), Positives = 46/86 (53%), Gaps = 16/86 (18%)
Frame = +3
Query: 112 RKLKKD*ALIIMILYVLLILLKPTGFR--------CFSYYLHSCWLSEFSF--------I 155
RK KK *AL + ILY+L ILLK G R C + L W + +
Sbjct: 774 RKRKKH*ALTLTILYLLHILLKWFGTRS**DLRQPCCFWELSGLWEGKCKVDLVLVVAPL 953
Query: 156 IRNVLMEC*TLEKHMLL**TNMPKTR 181
+R V++E TLEKHMLL *T +PKTR
Sbjct: 954 VR-VVVEYLTLEKHMLLK*TKIPKTR 1028
>TC92976 similar to GP|15021761|gb|AAK77908.1 AAA-metalloprotease FtsH
{Pisum sativum}, partial (12%)
Length = 824
Score = 87.4 bits (215), Expect = 3e-18
Identities = 56/104 (53%), Positives = 65/104 (61%), Gaps = 13/104 (12%)
Frame = +3
Query: 1 MGNDKKKTN---SQSLAQWMKVAVVGSFQEALKK----------LGTLMTLIGGLILSFF 47
MGNDKKKTN QS Q MK GSFQEAL K + M LI G+ LS
Sbjct: 255 MGNDKKKTNRKKKQSQTQKMKE---GSFQEALMKQFQEFRTPLSVAMAMILIMGITLSIL 425
Query: 48 YFRPFGKNQEISFQEFKIKVLEPGLVDHIVVSNKELAKIYVKNN 91
YF + Q+ISFQEF K+LEPGLVDHIVVS+K +A+IYV N+
Sbjct: 426 YFDAGKQQQQISFQEFVNKLLEPGLVDHIVVSDKNVAQIYVMNS 557
Score = 31.2 bits (69), Expect = 0.25
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +1
Query: 97 KYKYYFKIGSVDSFERKLKK 116
+YKYYF IG+V +FE KL++
Sbjct: 700 QYKYYFNIGNVFAFEEKLER 759
>BG588188 weakly similar to GP|20260382|gb| unknown protein {Arabidopsis
thaliana}, partial (6%)
Length = 670
Score = 29.6 bits (65), Expect = 0.72
Identities = 14/36 (38%), Positives = 22/36 (60%)
Frame = +1
Query: 89 KNNESEVAKYKYYFKIGSVDSFERKLKKD*ALIIMI 124
+ NES KY YFK + SF+++L KD +++I
Sbjct: 487 EKNESSHGKYSSYFKHATHISFKKRLCKDRLALVLI 594
>TC76803 PIR|T09622|T09622 protein kinase MMK4 (EC 2.7.1.-) cold- and
drought-induced - alfalfa, complete
Length = 1709
Score = 28.1 bits (61), Expect = 2.1
Identities = 19/44 (43%), Positives = 21/44 (47%)
Frame = +2
Query: 29 LKKLGTLMTLIGGLILSFFYFRPFGKNQEISFQEFKIKVLEPGL 72
L KL L+ LIG +I SFF E S Q FKI GL
Sbjct: 1556 LVKLFALL*LIGTMIYSFFLLYYSYSGYEFSEQNFKISYFLNGL 1687
>TC84968
Length = 526
Score = 27.7 bits (60), Expect = 2.8
Identities = 21/63 (33%), Positives = 28/63 (44%)
Frame = +2
Query: 86 IYVKNNESEVAKYKYYFKIGSVDSFERKLKKD*ALIIMILYVLLILLKPTGFRCFSYYLH 145
I++ NES +AKY K + + KD + + I K TGF FSY
Sbjct: 8 IFLYKNESIMAKYFVIIKPERTMDYFS*ILKD------TVKRM*IFNKTTGFTFFSYNR* 169
Query: 146 SCW 148
SCW
Sbjct: 170 SCW 178
>TC83711 weakly similar to GP|14279437|gb|AAK58599.1 ethylene-induced
esterase {Citrus sinensis}, partial (24%)
Length = 362
Score = 27.3 bits (59), Expect = 3.6
Identities = 10/29 (34%), Positives = 21/29 (71%)
Frame = -1
Query: 65 IKVLEPGLVDHIVVSNKELAKIYVKNNES 93
I +++P ++DH V+ + +KI++ NN+S
Sbjct: 110 IYIIDPSILDHPVLKFQWNSKIFIANNKS 24
>AW687281 weakly similar to SP|Q9LSU3|PSA6 Proteasome subunit alpha type 6
(EC 3.4.25.1) (20S proteasome alpha subunit A), partial
(65%)
Length = 612
Score = 26.6 bits (57), Expect = 6.1
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +1
Query: 109 SFERKLKKD*ALIIMILYVLLILLKP 134
S E +KKD I++IL V+++ LKP
Sbjct: 388 SVELMMKKDHNYIVLILLVIMLALKP 465
>TC89618 weakly similar to PIR|T05940|T05940 cytochrome P450 83D1p - soybean
(fragment), partial (20%)
Length = 883
Score = 26.6 bits (57), Expect = 6.1
Identities = 19/47 (40%), Positives = 26/47 (54%)
Frame = +2
Query: 46 FFYFRPFGKNQEISFQEFKIKVLEPGLVDHIVVSNKELAKIYVKNNE 92
FF F F Q+ Q F +++ GL IVVS+ E+AK KNN+
Sbjct: 221 FFIFN-FQNFQKFMDQYFHLQL---GLRSAIVVSSAEIAKEIFKNND 349
>AW586898
Length = 629
Score = 26.6 bits (57), Expect = 6.1
Identities = 20/47 (42%), Positives = 26/47 (54%), Gaps = 6/47 (12%)
Frame = -2
Query: 114 LKKD*ALIIMI----LYVLLIL--LKPTGFRCFSYYLHSCWLSEFSF 154
LKK LI + +Y+L L LKPTG ++ HSC LS F+F
Sbjct: 307 LKKSNILIFNV*SLEIYLLKFLKFLKPTGHFLCPFH-HSCALSSFNF 170
>TC78929 similar to GP|1946358|gb|AAB63076.1| unknown protein {Arabidopsis
thaliana}, partial (63%)
Length = 627
Score = 26.6 bits (57), Expect = 6.1
Identities = 14/47 (29%), Positives = 27/47 (56%)
Frame = -3
Query: 100 YYFKIGSVDSFERKLKKD*ALIIMILYVLLILLKPTGFRCFSYYLHS 146
Y K G++ + +KD ++++ + +L + KPTGFR S+ + S
Sbjct: 520 YSIK*GNITKRDM*SRKDVCIVVIGVPILSMRAKPTGFRESSHKVPS 380
>BM779623 weakly similar to GP|6118407|gb| flavone synthase II {Callistephus
chinensis}, partial (38%)
Length = 733
Score = 26.6 bits (57), Expect = 6.1
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +2
Query: 68 LEPGLVDHIVVSNKELAKIYVKNNESEVAKYKYYFKIGSV 107
L G V IVVS+ LAK ++K NE + K I +V
Sbjct: 239 LRLGSVPFIVVSSPSLAKEFLKTNELVYSSRKMNIAINTV 358
>BG588627 homologue to GP|21740798|emb OSJNBb0091E11.12 {Oryza sativa},
partial (4%)
Length = 807
Score = 26.2 bits (56), Expect = 8.0
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -2
Query: 122 IMILYVLLILLKPTGFRCFSYYLHSCWLSEFSFI 155
I ++Y+LL +KP CFS+ S W+S + +
Sbjct: 242 IALIYLLLTPVKPNFLSCFSF--PSSWISSTTLL 147
>TC91597 similar to GP|21323350|dbj|BAB97978. Hypothetical protein
{Corynebacterium glutamicum ATCC 13032}, partial (5%)
Length = 718
Score = 26.2 bits (56), Expect = 8.0
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -2
Query: 135 TGFRCFSYYLHSCWLSEF 152
TGF CFS L SC+L+ F
Sbjct: 372 TGFSCFSTGLSSCFLAGF 319
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.337 0.148 0.450
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,601,180
Number of Sequences: 36976
Number of extensions: 77189
Number of successful extensions: 814
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 811
length of query: 188
length of database: 9,014,727
effective HSP length: 91
effective length of query: 97
effective length of database: 5,649,911
effective search space: 548041367
effective search space used: 548041367
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 15 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.7 bits)
S2: 55 (25.8 bits)
Medicago: description of AC146759.1