TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146758.8 - phase: 0 /pseudo
         (35 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

BQ139183 similar to PIR|E84781|E84 hypothetical protein At2g3650...    61  1e-10
TC88824 similar to PIR|T47552|T47552 hypothetical protein F8J2.1...    57  2e-09
TC83338 similar to GP|9758290|dbj|BAB08814.1 emb|CAB86899.1~gene...    56  4e-09

>BQ139183 similar to PIR|E84781|E84 hypothetical protein At2g36500 [imported]
           - Arabidopsis thaliana, partial (25%)
          Length = 668

 Score = 60.8 bits (146), Expect = 1e-10
 Identities = 31/35 (88%), Positives = 32/35 (90%)
 Frame = +3

Query: 1   MAARRVDAVLLTDANGLLFGIMTDKDTATRVISEG 35
           MAARRVDAVLLTDAN LL GIMTDKD ATRVI+EG
Sbjct: 339 MAARRVDAVLLTDANALLSGIMTDKDIATRVIAEG 443


>TC88824 similar to PIR|T47552|T47552 hypothetical protein F8J2.120 -
           Arabidopsis thaliana, partial (69%)
          Length = 1309

 Score = 56.6 bits (135), Expect = 2e-09
 Identities = 27/35 (77%), Positives = 32/35 (91%)
 Frame = +1

Query: 1   MAARRVDAVLLTDANGLLFGIMTDKDTATRVISEG 35
           MAARRVDAVLLTD++ LL GI+TDKD ATRV++EG
Sbjct: 223 MAARRVDAVLLTDSSALLSGILTDKDVATRVVAEG 327


>TC83338 similar to GP|9758290|dbj|BAB08814.1
           emb|CAB86899.1~gene_id:MLE2.12~strong similarity to
           unknown protein {Arabidopsis thaliana}, partial (13%)
          Length = 519

 Score = 55.8 bits (133), Expect = 4e-09
 Identities = 26/34 (76%), Positives = 32/34 (93%)
 Frame = +3

Query: 1   MAARRVDAVLLTDANGLLFGIMTDKDTATRVISE 34
           MAARRVDA+LLTD+NGLL GI+TDKD AT+V++E
Sbjct: 372 MAARRVDALLLTDSNGLLCGILTDKDIATKVVAE 473


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.322    0.136    0.360 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 490,085
Number of Sequences: 36976
Number of extensions: 1545
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of query: 35
length of database: 9,014,727
effective HSP length: 11
effective length of query: 24
effective length of database: 8,607,991
effective search space: 206591784
effective search space used: 206591784
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (24.6 bits)