TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146757.12 + phase: 0 /partial
         (192 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

BF632421 similar to GP|1330293|emb|C orf {Homo sapiens}, partial...    99  1e-21
TC79434 weakly similar to GP|21689735|gb|AAM67489.1 unknown prot...    28  1.7

>BF632421 similar to GP|1330293|emb|C orf {Homo sapiens}, partial (88%)
          Length = 592

 Score = 98.6 bits (244), Expect = 1e-21
 Identities = 52/59 (88%), Positives = 52/59 (88%)
 Frame = +1

Query: 1   AKALTEKVHEVIRSEEKATRKFSYTVSGVLSSGGSSTSRSDNLQKLLEVTEKYSVYRFK 59
           AKALTEKVHEVIRSEEKATRKFSYTVSGVLSSG SSTSRSDNLQKLLEVTEK      K
Sbjct: 409 AKALTEKVHEVIRSEEKATRKFSYTVSGVLSSGASSTSRSDNLQKLLEVTEKIQYINLK 585


>TC79434 weakly similar to GP|21689735|gb|AAM67489.1 unknown protein
           {Arabidopsis thaliana}, partial (20%)
          Length = 1583

 Score = 28.5 bits (62), Expect = 1.7
 Identities = 20/66 (30%), Positives = 28/66 (42%)
 Frame = +1

Query: 4   LTEKVHEVIRSEEKATRKFSYTVSGVLSSGGSSTSRSDNLQKLLEVTEKYSVYRFKTRSC 63
           LT+   +VIR + KAT KF     G L   G   +     + L+      S Y F   +C
Sbjct: 169 LTKNRIDVIRRKRKATEKFLKKDIGDLLVNGLDVNAYGRAEGLIAELTLTSCYDFVEWTC 348

Query: 64  TFIDGH 69
            F+  H
Sbjct: 349 DFVLKH 366


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.316    0.131    0.362 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,879,350
Number of Sequences: 36976
Number of extensions: 52538
Number of successful extensions: 211
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 211
length of query: 192
length of database: 9,014,727
effective HSP length: 91
effective length of query: 101
effective length of database: 5,649,911
effective search space: 570641011
effective search space used: 570641011
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)