TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146752.5 + phase: 2 /pseudo/partial
         (273 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC88167 similar to GP|16416383|dbj|BAB70612. anthocyanin-related...   344  2e-95
BQ144095 weakly similar to GP|12842949|dbj| data source:SPTR  so...    30  0.76
BF646957 similar to GP|15215700|gb| AT3g16170/MSL1_21 {Arabidops...    28  3.8
TC77711 similar to PIR|T46160|T46160 caffeic acid O-methyltransf...    28  3.8
TC77007 similar to PIR|T10804|T10804 tonoplast intrinsic protein...    28  4.9
TC78141 similar to GP|5002348|gb|AAD37430.1| peroxidase 5 precur...    27  6.4

>TC88167 similar to GP|16416383|dbj|BAB70612. anthocyanin-related membrane
           protein 1 {Arabidopsis thaliana}, partial (87%)
          Length = 1397

 Score =  344 bits (882), Expect = 2e-95
 Identities = 200/249 (80%), Positives = 209/249 (83%), Gaps = 1/249 (0%)
 Frame = +3

Query: 1   QNGTIIYFLDWLMWKQIFLL*RHINTPHLQV*CYLTAGLFHASCCLHGFS*KQNIDSRR* 60
           QNGTIIYFLDWLMWKQIFLL*RHINTPHLQV*CYLTAGLFHASCCLHGFS*KQNIDSRR*
Sbjct: 285 QNGTIIYFLDWLMWKQIFLL*RHINTPHLQV*CYLTAGLFHASCCLHGFS*KQNIDSRR* 464

Query: 61  LV*LFA*LALS*LYFRMFMLVTVPVEVILV*ETFLLSLALPCMHSVMSVRSF**KMLIEK 120
           LV*LFA*LALS*LYFRMFMLVTVPVEVILV*ETFLLSLALPCMHSVMSVRSF**KMLIEK
Sbjct: 465 LV*LFA*LALS*LYFRMFMLVTVPVEVILV*ETFLLSLALPCMHSVMSVRSF**KMLIEK 644

Query: 121 SSWQC*VSLVVSSVPFKCLFGGIISAIQMYP*KLIIY*GLLVF-FVTFIFILKP*LSLQS 179
           SSWQC*VSLVVSSVPFK L+   +S + ++  +L  +   L F ++ F FIL    SL  
Sbjct: 645 SSWQC*VSLVVSSVPFK*LYLSAMS-LNLFTGRLGQHFLFLDFLWLCFCFIL---*SL-- 806

Query: 180 YT*AQ*A*IYSLVGWGICLSSMVLLC*ICLF*PQTCGLS*FASSLTMRRLIGCTTWRLVL 239
                            CLSSMVLLC*ICLF*PQTCGLS*FASSLTMRRLIGCTTWRLVL
Sbjct: 807 ----------------FCLSSMVLLC*ICLF*PQTCGLS*FASSLTMRRLIGCTTWRLVL 938

Query: 240 LSSALLSTL 248
           LSSALLSTL
Sbjct: 939 LSSALLSTL 965


>BQ144095 weakly similar to GP|12842949|dbj| data source:SPTR  source
           key:Q9Y2Y1  evidence:ISS~homolog to PUTATIVE
           DNA-DIRECTED RNA POLYMERASE, partial (39%)
          Length = 615

 Score = 30.4 bits (67), Expect = 0.76
 Identities = 16/53 (30%), Positives = 26/53 (48%), Gaps = 12/53 (22%)
 Frame = -3

Query: 232 CTTWRLVLLSSALLSTLCTYCCTFIS*TS----------CSVWSLF--FWYFF 272
           C    L L+++  +  L  YCC FIS*+S           ++W+ +  FW+ F
Sbjct: 457 CCISLLPLVATLFIQALVKYCCRFIS*SSLLHVITSLRMATIWAWYVGFWFIF 299


>BF646957 similar to GP|15215700|gb| AT3g16170/MSL1_21 {Arabidopsis
           thaliana}, partial (34%)
          Length = 643

 Score = 28.1 bits (61), Expect = 3.8
 Identities = 17/41 (41%), Positives = 24/41 (58%)
 Frame = -1

Query: 137 KCLFGGIISAIQMYP*KLIIY*GLLVFFVTFIFILKP*LSL 177
           KCL   +   + +Y *K  + *  + FFVT+ F+L P LSL
Sbjct: 187 KCLLKVLNEFLILYL*KKWVE*NFVCFFVTWRFLLCPFLSL 65


>TC77711 similar to PIR|T46160|T46160 caffeic acid O-methyltransferase-like
           protein - Arabidopsis thaliana, partial (86%)
          Length = 2361

 Score = 28.1 bits (61), Expect = 3.8
 Identities = 13/41 (31%), Positives = 19/41 (45%)
 Frame = +1

Query: 230 IGCTTWRLVLLSSALLSTLCTYCCTFIS*TSCSVWSLFFWY 270
           I C++    + SS  LS  C++CC       C  WS   W+
Sbjct: 208 IRCSS*SCWISSSCCLSWFCSFCC-------CFCWSQHIWW 309


>TC77007 similar to PIR|T10804|T10804 tonoplast intrinsic protein  delta
           type - upland cotton, complete
          Length = 1041

 Score = 27.7 bits (60), Expect = 4.9
 Identities = 13/41 (31%), Positives = 18/41 (43%)
 Frame = +1

Query: 230 IGCTTWRLVLLSSALLSTLCTYCCTFIS*TSCSVWSLFFWY 270
           I C++    + SS  L   CT+CC       C  W   FW+
Sbjct: 214 IRCSS*SSRVTSSCCLPWFCTFCC-------CCSWCQHFWW 315


>TC78141 similar to GP|5002348|gb|AAD37430.1| peroxidase 5 precursor
           {Phaseolus vulgaris}, partial (92%)
          Length = 1254

 Score = 27.3 bits (59), Expect = 6.4
 Identities = 9/23 (39%), Positives = 14/23 (60%), Gaps = 2/23 (8%)
 Frame = +1

Query: 249 CTYCCTFIS--*TSCSVWSLFFW 269
           C  CC ++   *+SC +W  +FW
Sbjct: 553 CQICCCWLKHK*SSCIIWCTYFW 621


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.374    0.167    0.659 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,271,150
Number of Sequences: 36976
Number of extensions: 194507
Number of successful extensions: 4567
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2483
Number of HSP's successfully gapped in prelim test: 176
Number of HSP's that attempted gapping in prelim test: 1973
Number of HSP's gapped (non-prelim): 2833
length of query: 273
length of database: 9,014,727
effective HSP length: 95
effective length of query: 178
effective length of database: 5,502,007
effective search space: 979357246
effective search space used: 979357246
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 13 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 35 (21.5 bits)
S2: 57 (26.6 bits)