BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146752.14 - phase: 2 /pseudo
(1086 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC83437 weakly similar to PIR|D86384|D86384 unknown protein [imp... 185 9e-47
TC80819 weakly similar to GP|10140689|gb|AAG13524.1 putative non... 157 2e-38
BG586266 similar to GP|7267666|em RNA-directed DNA polymerase-li... 128 1e-29
BE248682 similar to GP|18568269|gb putative gag-pol polyprotein ... 124 2e-28
TC77455 similar to GP|22335695|dbj|BAC10549. nine-cis-epoxycarot... 124 2e-28
CA919100 homologue to PIR|G90291|G902 endoglucanase precursor [i... 97 4e-20
AW686588 82 1e-15
BE941032 74 2e-14
TC82520 75 1e-13
BF650289 weakly similar to GP|9049283|dbj| orf129a {Beta vulgari... 74 2e-13
BF650593 68 2e-11
BG647708 weakly similar to GP|13786450|gb| putative reverse tran... 63 5e-10
AW774658 similar to GP|2808681|emb| Hcr9-4B {Lycopersicon hirsut... 44 1e-07
BE999296 55 1e-07
BG587113 weakly similar to PIR|A84888|A8 hypothetical protein At... 52 1e-06
BG585866 49 8e-06
BG456581 48 2e-05
BF520135 47 4e-05
BG453645 47 5e-05
BG586862 46 7e-05
>TC83437 weakly similar to PIR|D86384|D86384 unknown protein [imported] -
Arabidopsis thaliana, partial (6%)
Length = 951
Score = 185 bits (469), Expect = 9e-47
Identities = 112/280 (40%), Positives = 159/280 (56%), Gaps = 1/280 (0%)
Frame = +2
Query: 531 MVVGSVVFASQSAFIKGRQILDGILIANELVDDAKRNNKELLMFKVDFEKAYDSVDWRYL 590
+V+GSV+ +QSAF+K RQIL+ + + + RN +++ K ++ +
Sbjct: 179 VVIGSVISDAQSAFVKNRQILEMVFL*QMRLWMRLRN*RKIFCCLRWILKRLITLSIGLI 358
Query: 591 DEVM-AKMNFPRLWRSWIMECVTTATTSVLVNGCPTDEFHFERGLRQGDPLSPFLFLLAA 649
+ M+F LWR WI ECV+TATTSVLVNG PT
Sbjct: 359 WILF*VGMSFLVLWRKWIKECVSTATTSVLVNGSPT------------------------ 466
Query: 650 EGLNVMMSTVGSNGLFAPYTVGAEVPVSVSHLQFADDTLLIGVKSWANVRAMKTVLLLFE 709
NV+M ++ LF Y+ G PV VSHLQFA+DTLL+ K+WAN+RA++ L++F
Sbjct: 467 ---NVLMKSLVQTQLFTRYSFGVVNPVVVSHLQFANDTLLLETKNWANIRALRAALVIF* 637
Query: 710 DVSGLKVNFHKSMFFGVNINESWLHEAAVVMHCRHGRIPFIYLGLPIGGDPRKLHFWHPL 769
+SGLKVNFHKS VNI SWL EAA V+ + G++PF+YLG+PI G+ R+L FW P+
Sbjct: 638 AMSGLKVNFHKSGLVCVNIAPSWLSEAASVLSWKVGKVPFLYLGMPIEGNSRRLSFWEPI 817
Query: 770 VERIRRRLSGVLEDRESLWNVVLCAKYGEVGGRVQFSEGV 809
V RI+ RL+G WN +++ GGR+ + V
Sbjct: 818 VNRIKARLTG--------WN----SRFLSFGGRLVLLKSV 901
>TC80819 weakly similar to GP|10140689|gb|AAG13524.1 putative non-LTR
retroelement reverse transcriptase {Oryza sativa
(japonica cultivar-group)}, partial (2%)
Length = 1262
Score = 157 bits (397), Expect = 2e-38
Identities = 80/188 (42%), Positives = 104/188 (54%)
Frame = +2
Query: 879 EMFLLGWGADGGAWRWRRRLFAWEEELVEECVARLSNFVLQADLSDRWVWRLHSSQLYTV 938
+M LGW DG AW W RRLF WEEE V EC L+NFVLQ +++D+W W L Y+V
Sbjct: 383 DMGRLGWTVDGRAWEWTRRLFVWEEECVRECCILLNNFVLQDNVNDKWRWLLDPVNGYSV 562
Query: 939 QSAYSYLTAVDSNITAEFDRFLWLKAVPLKVNIFVWRLFLNRLATKDNLRKRNVLEATNV 998
+ Y Y+T+ +W K +P KV++FVWRL NRL TKDNL R VL ATN
Sbjct: 563 KVFYRYITSTGHISDRSLVDDVWHKHIPSKVSLFVWRLLRNRLPTKDNLVHRGVLLATNA 742
Query: 999 SSGALCGKEEERDHLFFQCDYYGRLWLLISNWLGFVTVFHDNLYTHANQFCALGGFSKNY 1058
+ C E HLF C+ + LW L+ NWLG ++ L TH QF + G +
Sbjct: 743 ACVCGCVDSESTTHLFLHCNVFCSLWSLVRNWLGIPSMSSGELRTHFIQFAKMVGMPRVS 922
Query: 1059 MKAFTIIW 1066
F +I+
Sbjct: 923 HLYFRLIF 946
Score = 62.4 bits (150), Expect(2) = 5e-13
Identities = 31/79 (39%), Positives = 42/79 (52%)
Frame = +3
Query: 812 IWWRQLNQIRCGVGLAENAWLVDNIVRKVGDGSTTLFWEDPWLLNVPLAVSFSRLFELAE 871
+WW+ + ++R GVG W +NI VGDG FW D W +VPL + + RL +LA
Sbjct: 180 MWWKTICKVREGVGEGVGNWFEENIRMVVGDGRDAFFWYDTWAGDVPLRLKYPRLLDLAM 359
Query: 872 NKGVSVREMFLLGWGADGG 890
+K V L WG GG
Sbjct: 360 DKECKVG----LTWGGWGG 404
Score = 30.8 bits (68), Expect = 3.0
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +1
Query: 1058 YMKAFTIIWISVLFTIWKDRNRRIFQNQI 1086
+ K+F+ I + IWK+RN R+FQN +
Sbjct: 907 HAKSFSFILQVNFWVIWKERNNRLFQNTV 993
Score = 30.8 bits (68), Expect(2) = 5e-13
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +1
Query: 780 VLEDRESLWNVVLCAKYGEVGG 801
+L D+E LW+ VL A+YGE GG
Sbjct: 85 LLVDKEGLWHRVLKARYGEEGG 150
>BG586266 similar to GP|7267666|em RNA-directed DNA polymerase-like protein
{Arabidopsis thaliana}, partial (18%)
Length = 789
Score = 128 bits (322), Expect = 1e-29
Identities = 69/190 (36%), Positives = 107/190 (56%), Gaps = 3/190 (1%)
Frame = -3
Query: 535 SVVFASQSAFIKGRQILDGILIANELVDDAKRNNKEL---LMFKVDFEKAYDSVDWRYLD 591
S++ SQSAF+ GR I D +LI ++++ +++ + + K D KAYD + W +L
Sbjct: 688 SIISPSQSAFVPGRAISDNVLITHKILHYLRQSGAKKHVSMAVKTDMTKAYDRIAWNFLR 509
Query: 592 EVMAKMNFPRLWRSWIMECVTTATTSVLVNGCPTDEFHFERGLRQGDPLSPFLFLLAAEG 651
EV+ ++ F +W SWIMECV+T + S L+NG P RGLRQGDPLSP+LF+L E
Sbjct: 508 EVLTRLGFHGIWISWIMECVSTVSYSFLINGGPQGRVLPSRGLRQGDPLSPYLFILCTEV 329
Query: 652 LNVMMSTVGSNGLFAPYTVGAEVPVSVSHLQFADDTLLIGVKSWANVRAMKTVLLLFEDV 711
L+ + G V P ++HL FADDT+ G + ++ + +++ +
Sbjct: 328 LSGLCQQALRKGTLPGVKVARNCP-PINHLLFADDTMFFGKSNASSCAILLSIMDKYRAA 152
Query: 712 SGLKVNFHKS 721
SG +N KS
Sbjct: 151 SGRCIN*TKS 122
>BE248682 similar to GP|18568269|gb putative gag-pol polyprotein {Zea mays},
partial (1%)
Length = 441
Score = 124 bits (312), Expect = 2e-28
Identities = 69/147 (46%), Positives = 90/147 (60%), Gaps = 3/147 (2%)
Frame = +3
Query: 626 DEFHFERGLRQGDPLSPFLFLLAAEGLNVMMSTVGSNGLFAPYTVGAEVPVSVSHLQFAD 685
+E +RGL+QGDPL+PFLFLL AEG++ +M + LF + V VSHLQ+AD
Sbjct: 6 EEISVQRGLKQGDPLAPFLFLLVAEGISGLMKNAVNRNLFQGFDV-KRGGTRVSHLQYAD 182
Query: 686 DTLLIGVKSWANVRAMKTVLLLFEDVSGLKVNFHKSMFFGVNINESWLHEAAVVMHCRHG 745
DTL IG+ + N+ +K +L FE SGLKVNFHKS G+N+ ++ A ++CR
Sbjct: 183 DTLCIGMPTVDNLWTLKALLQGFEMASGLKVNFHKSSLIGINVPRDFMEAACRFLNCREE 362
Query: 746 RIPFIYLGLPIGGD---PRKLHFWHPL 769
IPFIYLGLP GG R H W L
Sbjct: 363 SIPFIYLGLP-GGS*S*KRLSHLWGAL 440
>TC77455 similar to GP|22335695|dbj|BAC10549. nine-cis-epoxycarotenoid
dioxygenase1 {Pisum sativum}, partial (43%)
Length = 1865
Score = 124 bits (311), Expect = 2e-28
Identities = 80/243 (32%), Positives = 118/243 (47%), Gaps = 10/243 (4%)
Frame = -2
Query: 813 WWRQLNQIRCGVGLAENAWLVDNIVRKVGDGSTTLFWEDPWLLNVPLAVSFSRLFELAEN 872
WW+ L + + W ++RKVGDG ++ FW+D W +VPL SF R F
Sbjct: 772 WWKDLMSLE---EVGRVRWFPRELIRKVGDGRSSFFWKDAWDSSVPLRESFPRAFFPYRL 602
Query: 873 KGVSVREMFLLGWGADGGAWR--WRR-RLFAWEEELVEECVARLSNFVLQADLSDRWVWR 929
+ +++ A+G WR WRR LF WE+E + E + RL VL+ +D WVW+
Sbjct: 601 LKMGCGDLW--DMNAEGVRWRLYWRRLELFEWEKERLLELLGRLEGVVLRY-WADIWVWK 431
Query: 930 LHSSQLYTVQSAY---SYLTAVDSNITAEFD---RFLWLKAVPLKVNIFVWRLFLNRLAT 983
+++V S Y L ++ ++ E + R LW P KV F W LFL+R+ T
Sbjct: 430 PDKEGVFSVNSCYFLLQNLRLLEDRLSYEEEVIFRELWKSKAPAKVLAFSWTLFLDRIPT 251
Query: 984 KDNLRKRNVLEATNVSSGALCGKEEER-DHLFFQCDYYGRLWLLISNWLGFVTVFHDNLY 1042
NL KR +L + CG ++E HLF CD ++ + WL F + NL
Sbjct: 250 MVNLGKRRLLRVEDSKRCVFCGCQDETVVHLFLHCDVISKV*REVMRWLNFNLISPPNLL 71
Query: 1043 THA 1045
HA
Sbjct: 70 IHA 62
>CA919100 homologue to PIR|G90291|G902 endoglucanase precursor [imported] -
Sulfolobus solfataricus, partial (3%)
Length = 789
Score = 96.7 bits (239), Expect = 4e-20
Identities = 51/133 (38%), Positives = 70/133 (52%), Gaps = 2/133 (1%)
Frame = -2
Query: 956 FDRFLWLKAVPLKVNIFVWRLFLNRLATKDNLRKRNVL--EATNVSSGALCGKEEERDHL 1013
+ +W + VPLKV++F WRL +RL TK NL R V+ EA SG CG E HL
Sbjct: 596 YAEMIWHRQVPLKVSVFAWRLLRDRLPTKSNLIYRGVIPTEAGLCVSG--CGALESAQHL 423
Query: 1014 FFQCDYYGRLWLLISNWLGFVTVFHDNLYTHANQFCALGGFSKNYMKAFTIIWISVLFTI 1073
F C Y+ LW L+ +W+GFV V + L H QF G +K +IW+ + +
Sbjct: 422 FLSCSYFASLWSLVRDWIGFVGVDTNVLSDHFVQFVHSTGGNKASQSFLQLIWLLCAWVL 243
Query: 1074 WKDRNRRIFQNQI 1086
W +RN F + I
Sbjct: 242 WTERNNMCFNDSI 204
>AW686588
Length = 567
Score = 81.6 bits (200), Expect = 1e-15
Identities = 41/118 (34%), Positives = 58/118 (48%)
Frame = +1
Query: 965 VPLKVNIFVWRLFLNRLATKDNLRKRNVLEATNVSSGALCGKEEERDHLFFQCDYYGRLW 1024
VPLKV+I WRL +RL TK NL +R L CG E +HLF C +G +W
Sbjct: 142 VPLKVSILAWRLIRDRLPTKANLVRRRCLAVEAAGCVVGCGIAETANHLFLHCATFGAVW 321
Query: 1025 LLISNWLGFVTVFHDNLYTHANQFCALGGFSKNYMKAFTIIWISVLFTIWKDRNRRIF 1082
I W+G +L H QF G ++ +IW+ ++ +W +RN R+F
Sbjct: 322 QHIRAWIGVSGADPHDLSDHFIQFITCTGHTRARRSFMQLIWLLCVWMVWNERNNRLF 495
>BE941032
Length = 435
Score = 73.9 bits (180), Expect(2) = 2e-14
Identities = 35/86 (40%), Positives = 50/86 (57%)
Frame = +2
Query: 970 NIFVWRLFLNRLATKDNLRKRNVLEATNVSSGALCGKEEERDHLFFQCDYYGRLWLLISN 1029
+IF+W + LNR TKDNL KR V+ A S CG + HLF C+++ ++W+ +S+
Sbjct: 146 SIFLWCVLLNRFPTKDNLLKRGVISAIYQSCVGECGNLYDATHLFLHCNFFRQIWINVSD 325
Query: 1030 WLGFVTVFHDNLYTHANQFCALGGFS 1055
WL FV V + QF + GGFS
Sbjct: 326 WLSFVMVTLLRISDRLAQFGSFGGFS 403
Score = 23.9 bits (50), Expect(2) = 2e-14
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 921 DLSDRWVWRLHSSQLYTVQSAYSYL 945
D +D W LHSS+ T+ +AYS+L
Sbjct: 9 DTNDVWPKNLHSSKNCTI-NAYSFL 80
>TC82520
Length = 833
Score = 75.5 bits (184), Expect = 1e-13
Identities = 59/203 (29%), Positives = 86/203 (42%), Gaps = 14/203 (6%)
Frame = +2
Query: 898 LFAWEEELVEECVARLSNFVLQADLSDRWVWRLHSSQLYTVQSAYSYLTAVDSNITAEFD 957
LFAWEEE V E A L N VLQ ++ D W L YT + NI+
Sbjct: 2 LFAWEEESVREWYALLHNTVLQENVHDVCRWLLDPI*GYT-----------EGNIS--LS 142
Query: 958 RFLWL------------KAVPLKVNIFVWRLFLNRLATKDNLRKRNVLEATNVSSGAL-- 1003
+LW K K ++V L++ + + +TN S G
Sbjct: 143 HYLWTTIG*ESS*RCLAKEYSFK-GVYVRVASLSQ*TSHEG*FNAATCSSTN-SHGLHFG 316
Query: 1004 CGKEEERDHLFFQCDYYGRLWLLISNWLGFVTVFHDNLYTHANQFCALGGFSKNYMKAFT 1063
CG E HLF CD +G LW + WL + V ++ QF ++ G +
Sbjct: 317 CGDSETATHLFLHCDIFGSLWSHVLRWLHLLLVLPADIRQFFIQFTSMAGSPRFTHSFLQ 496
Query: 1064 IIWISVLFTIWKDRNRRIFQNQI 1086
I+W + ++ +WK RN R+FQN +
Sbjct: 497 IMWFASVWVLWKKRNNRVFQNSL 565
>BF650289 weakly similar to GP|9049283|dbj| orf129a {Beta vulgaris}, partial
(69%)
Length = 616
Score = 74.3 bits (181), Expect = 2e-13
Identities = 37/92 (40%), Positives = 57/92 (61%), Gaps = 1/92 (1%)
Frame = +3
Query: 532 VVGSVVFASQSAFIKGRQILDGILIANELVDDAKRNN-KELLMFKVDFEKAYDSVDWRYL 590
V+ SVV +QSAF+KGR I D I++++ELV R M K+D KAYDS +W ++
Sbjct: 324 VLNSVVSENQSAFVKGRVIFDNIILSHELVKSYSRKGISPRCMVKIDLXKAYDSXEWPFI 503
Query: 591 DEVMAKMNFPRLWRSWIMECVTTATTSVLVNG 622
+M ++ FP + +W+M +TTA+ + NG
Sbjct: 504 KHLMLELGFPYKFVNWVMAXLTTASYTFNXNG 599
>BF650593
Length = 486
Score = 68.2 bits (165), Expect = 2e-11
Identities = 30/57 (52%), Positives = 39/57 (67%)
Frame = +3
Query: 963 KAVPLKVNIFVWRLFLNRLATKDNLRKRNVLEATNVSSGALCGKEEERDHLFFQCDY 1019
K+VPLKV+ VWRLF N LAT+DNL KR VL+ ++ CG+EE H FF+C +
Sbjct: 300 KSVPLKVSCLVWRLFQNXLATRDNLSKRGVLDQNSIXCVXDCGREESVSHFFFECPF 470
>BG647708 weakly similar to GP|13786450|gb| putative reverse transcriptase
{Oryza sativa}, partial (9%)
Length = 708
Score = 63.2 bits (152), Expect = 5e-10
Identities = 36/91 (39%), Positives = 50/91 (54%)
Frame = +1
Query: 631 ERGLRQGDPLSPFLFLLAAEGLNVMMSTVGSNGLFAPYTVGAEVPVSVSHLQFADDTLLI 690
E+GLRQGDPLSP+LF+L A L+ ++ G+ V P ++HL FADD+LL
Sbjct: 7 EKGLRQGDPLSPYLFILCANVLSGLLKREGNKQNLHGIQVARSDP-KITHLLFADDSLLF 183
Query: 691 GVKSWANVRAMKTVLLLFEDVSGLKVNFHKS 721
+ + VL ++ SG VNF KS
Sbjct: 184 ARANLTEAATIMQVLHSYQSASGQLVNFEKS 276
>AW774658 similar to GP|2808681|emb| Hcr9-4B {Lycopersicon hirsutum}, partial
(4%)
Length = 665
Score = 43.5 bits (101), Expect(2) = 1e-07
Identities = 21/41 (51%), Positives = 27/41 (65%)
Frame = -1
Query: 657 STVGSNGLFAPYTVGAEVPVSVSHLQFADDTLLIGVKSWAN 697
S + S+ + ++G SHLQFADDTLL+GVKSWAN
Sbjct: 449 SNLLSHSICLNLSIGMHSLTVFSHLQFADDTLLLGVKSWAN 327
Score = 31.2 bits (69), Expect(2) = 1e-07
Identities = 12/28 (42%), Positives = 22/28 (77%)
Frame = -3
Query: 699 RAMKTVLLLFEDVSGLKVNFHKSMFFGV 726
RA++++L++FE++SGLKVN + + V
Sbjct: 327 RALRSILVIFENMSGLKVNLREEVIIYV 244
>BE999296
Length = 384
Score = 55.1 bits (131), Expect = 1e-07
Identities = 31/94 (32%), Positives = 46/94 (47%)
Frame = -1
Query: 938 VQSAYSYLTAVDSNITAEFDRFLWLKAVPLKVNIFVWRLFLNRLATKDNLRKRNVLEATN 997
+ AY +L + D+ + E+ +W +PLKV FV R+ N L TKDN +R V+ +
Sbjct: 306 IHGAYQFLMSADAPLDREYIDSVWHNHIPLKVCFFVLRVLRNCLPTKDNFVRRRVIHEEH 127
Query: 998 VSSGALCGKEEERDHLFFQCDYYGRLWLLISNWL 1031
+ C +E D LF LW L+ WL
Sbjct: 126 MLCPTGCSFKETTDDLF--------LWPLV*QWL 49
>BG587113 weakly similar to PIR|A84888|A8 hypothetical protein At2g45230
[imported] - Arabidopsis thaliana, partial (10%)
Length = 767
Score = 52.4 bits (124), Expect = 1e-06
Identities = 37/139 (26%), Positives = 60/139 (42%), Gaps = 11/139 (7%)
Frame = -3
Query: 924 DRWVWRLHSSQLYTVQSAYSYLT----------AVDSNITAEFDRFLWLKAVPLKVNIFV 973
D + W S Y+V+S Y T VD + + +W KV F+
Sbjct: 426 DSYSWEYSKSGHYSVKSGYYVQTNIIAAANQRGTVDQPSLDDLYQRVWKYNTSPKVRHFL 247
Query: 974 WRLFLNRLATKDNLRKRNVLEATNVSSGALCGKEEER-DHLFFQCDYYGRLWLLISNWLG 1032
WR N L T N+R R++ + S + CG E E +H+ FQC Y +W
Sbjct: 246 WRCISNSLPTAANMRSRHI---SKDGSCSRCGMESETVNHILFQCPYARLIWATSPIHAP 76
Query: 1033 FVTVFHDNLYTHANQFCAL 1051
+ +D+LY++ ++ +L
Sbjct: 75 PYGIMYDSLYSNLHRVLSL 19
>BG585866
Length = 828
Score = 49.3 bits (116), Expect = 8e-06
Identities = 29/116 (25%), Positives = 54/116 (46%), Gaps = 2/116 (1%)
Frame = +3
Query: 920 ADLSDRWVWRLHSSQLYTVQSAYSYLTAVDSNITAEFD--RFLWLKAVPLKVNIFVWRLF 977
A + D ++W +S+ +YT +S YS++ + + ++W +P K F+W
Sbjct: 336 ASIGDAYIWPHNSNGVYTAKSGYSWILSQTETVNYNNSSWSWIWRLKIPEKYKFFLWLAC 515
Query: 978 LNRLATKDNLRKRNVLEATNVSSGALCGKEEERDHLFFQCDYYGRLWLLISNWLGF 1033
N + T L RN++ + A+C + E + FF C R +I + +GF
Sbjct: 516 HNAVPTLSLLNHRNMV------NSAICSRCGEHEESFFHCVRDCRFSKIIWHKIGF 665
>BG456581
Length = 683
Score = 48.1 bits (113), Expect = 2e-05
Identities = 34/102 (33%), Positives = 50/102 (48%), Gaps = 1/102 (0%)
Frame = +2
Query: 931 HSSQLYTVQSAYSYLTAVDSNITAEFDRFLWLKAVPLKVNIFVWRLFLNRLATKDNLRKR 990
H +L T++ YS+LT+ S A + +W +P + WRL +RL T DNL R
Sbjct: 2 HQGKL-TIKLVYSFLTSHTS--CAPWASTIWNSCIPPSHSFICWRLAHDRLPTDDNLSSR 172
Query: 991 NVLEATNVSSGALCGKE-EERDHLFFQCDYYGRLWLLISNWL 1031
VS + C ++ E DHLF +C + LW +WL
Sbjct: 173 G---CALVSMCSFCLEQVETSDHLFLRCKFVVTLW----SWL 277
>BF520135
Length = 202
Score = 47.0 bits (110), Expect = 4e-05
Identities = 26/62 (41%), Positives = 30/62 (47%)
Frame = +3
Query: 960 LWLKAVPLKVNIFVWRLFLNRLATKDNLRKRNVLEATNVSSGALCGKEEERDHLFFQCDY 1019
LW K KV+IF WRLF RL TK N+ KR ++ C E HLF CD
Sbjct: 15 LWRKEDLSKVSIFAWRLFHGRLPTKANVFKRGIVHHDAHMCVTRCRLIESDVHLFLHCDV 194
Query: 1020 YG 1021
G
Sbjct: 195 LG 200
>BG453645
Length = 622
Score = 46.6 bits (109), Expect = 5e-05
Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 1/94 (1%)
Frame = +3
Query: 991 NVLEATNVSSGALCG-KEEERDHLFFQCDYYGRLWLLISNWLGFVTVFHDNLYTHANQFC 1049
N L S+ LC K E H+F CD +W + W + NL+ H +
Sbjct: 3 NALPPEVSSTCVLCNLKVETTTHIFLHCDVASLVWFRVMKWFDVNFLIPPNLFVHW-ECW 179
Query: 1050 ALGGFSKNYMKAFTIIWISVLFTIWKDRNRRIFQ 1083
+ GG + K ++W + ++ +W RN IF+
Sbjct: 180 SEGGSANRVTKGHWLVWHTTIWVLWAKRNDLIFK 281
>BG586862
Length = 804
Score = 46.2 bits (108), Expect = 7e-05
Identities = 35/127 (27%), Positives = 58/127 (45%), Gaps = 4/127 (3%)
Frame = -1
Query: 962 LKAVPLKVNIFVWRLFLNRLATKDNLRKRNVLEATNVSSGALCGKEEER----DHLFFQC 1017
+K +P + F+WRL N L KD L KR + LC + E + HLF C
Sbjct: 645 IKTIP-RHKSFLWRLLHNALPVKDELHKRGI------RCSLLCPRCESKIETVQHLFLNC 487
Query: 1018 DYYGRLWLLISNWLGFVTVFHDNLYTHANQFCALGGFSKNYMKAFTIIWISVLFTIWKDR 1077
+ + W + LG FH + H + + + F + I ++L++IW R
Sbjct: 486 EVTQKEWF--GSQLGIN--FHSSGVLHFHDW--ITNFILKNDEETIIALTALLYSIWHAR 325
Query: 1078 NRRIFQN 1084
N+++F+N
Sbjct: 324 NQKVFEN 304
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.347 0.155 0.542
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,723,974
Number of Sequences: 36976
Number of extensions: 670812
Number of successful extensions: 6915
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 2845
Number of HSP's successfully gapped in prelim test: 363
Number of HSP's that attempted gapping in prelim test: 3857
Number of HSP's gapped (non-prelim): 3542
length of query: 1086
length of database: 9,014,727
effective HSP length: 106
effective length of query: 980
effective length of database: 5,095,271
effective search space: 4993365580
effective search space used: 4993365580
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 14 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 38 (21.7 bits)
S2: 64 (29.3 bits)
Medicago: description of AC146752.14