Medicago
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146751.9 - phase: 0 
         (186 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC80547 similar to GP|7268087|emb|CAB78425.1 DnaJ-like protein {...   335  8e-93
TC80859 weakly similar to GP|22295876|dbj|BAC09701. DnaJ protein...    80  6e-16
TC83173 similar to PIR|T11855|T11855 DnaJ protein homolog - kidn...    69  1e-12
TC77215 similar to PIR|T11855|T11855 DnaJ protein homolog - kidn...    66  9e-12
TC77214 similar to PIR|T11855|T11855 DnaJ protein homolog - kidn...    65  1e-11
TC87441 similar to GP|21928031|gb|AAM78044.1 At3g62600/F26K9_30 ...    64  3e-11
BG452391 weakly similar to GP|22135874|gb| DnaJ protein  putativ...    63  6e-11
TC89246 homologue to PIR|T06594|T06594 heat shock protein dnaJ -...    63  8e-11
BF631720 weakly similar to GP|10798648|em putative DNAJ protein ...    62  1e-10
BF005029 similar to GP|9758896|dbj| gene_id:MRG7.10~unknown prot...    62  1e-10
TC90060 similar to GP|23428796|gb|AAM23263.1 DnaJ-like protein {...    62  1e-10
BG647719 similar to GP|10177754|dbj DnaJ protein-like {Arabidops...    62  2e-10
TC85315 similar to GP|9758827|dbj|BAB09499.1 gene_id:MTH12.18~un...    60  4e-10
TC79039 similar to GP|9294537|dbj|BAB02800.1 DnaJ-like protein {...    60  7e-10
TC90074 similar to PIR|G84590|G84590 probable heat shock protein...    59  9e-10
TC93716 similar to GP|6179940|gb|AAF05720.1| DnaJ-like protein {...    59  9e-10
TC80183 similar to GP|4508077|gb|AAD21421.1| 62114 {Arabidopsis ...    59  9e-10
TC87379 similar to PIR|T04618|T04618 heat shock protein homolog ...    59  1e-09
TC77858 similar to GP|20197886|gb|AAD22362.2 putative DnaJ prote...    59  1e-09
TC82757 similar to PIR|T08563|T08563 dnaJ-related protein T22F8....    58  2e-09

>TC80547 similar to GP|7268087|emb|CAB78425.1 DnaJ-like protein {Arabidopsis
           thaliana}, partial (34%)
          Length = 776

 Score =  335 bits (858), Expect = 8e-93
 Identities = 170/193 (88%), Positives = 177/193 (91%), Gaps = 7/193 (3%)
 Frame = +2

Query: 1   MRCYGLTIPGSDHRLITPTLPP-SLSFRPTTIPMTRISFGASFPKLKATFNDGMAAEERS 59
           MRCYGLTIPGSDHR ITPTLPP SLSFRPTTIPMTRISFG+SFPKL+ATFNDG+ AEERS
Sbjct: 29  MRCYGLTIPGSDHRFITPTLPPPSLSFRPTTIPMTRISFGSSFPKLRATFNDGVVAEERS 208

Query: 60  FYDLLGIPESGSLMDIKRAYKQLARKYHPDVSPPDRVKEYTKRFIQVQEAYETLSDPSRR 119
           FYDLLGIPESGSLMDIK AYKQLARKYHPDVSPPDRV+EYTKRFIQVQEAYETLSDPSRR
Sbjct: 209 FYDLLGIPESGSLMDIKSAYKQLARKYHPDVSPPDRVEEYTKRFIQVQEAYETLSDPSRR 388

Query: 120 IMYDRDMAIGIHLAFNACKCYNHSDQVSEQKGDWK----SQLAGLQRRSDSKV--AAENM 173
           IMYDRDMA GIHLAFNA KCYNHSDQVSEQKG+WK    SQL GL+RRSDSKV   AEN 
Sbjct: 389 IMYDRDMARGIHLAFNARKCYNHSDQVSEQKGEWKSRWQSQLDGLKRRSDSKVMDGAENT 568

Query: 174 SWAARVRQQRGEL 186
           SWAAR+RQQRG L
Sbjct: 569 SWAARIRQQRGGL 607


>TC80859 weakly similar to GP|22295876|dbj|BAC09701. DnaJ protein
           {Thermosynechococcus elongatus BP-1}, partial (9%)
          Length = 800

 Score = 79.7 bits (195), Expect = 6e-16
 Identities = 52/164 (31%), Positives = 90/164 (54%), Gaps = 4/164 (2%)
 Frame = +1

Query: 23  SLSFRPTTIPMTRISFGASFPKLKATFNDGMAAEERSFYDLLGI-PESGSLMDIKRAYKQ 81
           S   RP+ +    IS  A+  KL     +G      +FY +L + P+S ++ DIKRAY+ 
Sbjct: 133 SKQLRPSHVHFATISCRAT--KLVEETKNGS-----NFYKMLSVNPKSATMEDIKRAYRS 291

Query: 82  LARKYHPDV-SPPDRVKEYTKRFIQVQEAYETLSDPSRRIMYDRDMAIGIHLAFNACKCY 140
           +A +YHPDV   P   +E TK F+++  AYETLS+P  R  YD ++ +  ++        
Sbjct: 292 MALQYHPDVCHDPSMKEESTKIFVRLNAAYETLSNPMLREQYDSELGLRNNM-------M 450

Query: 141 NHSDQVSEQ--KGDWKSQLAGLQRRSDSKVAAENMSWAARVRQQ 182
           N+++ V+E+  +  W+ Q+  L++RS+ ++     SW +  R +
Sbjct: 451 NNNNIVNEEIWRSRWQEQVVELKKRSNRRMEQRGRSWGSTSRMR 582


>TC83173 similar to PIR|T11855|T11855 DnaJ protein homolog - kidney bean
           (fragment), partial (83%)
          Length = 675

 Score = 68.9 bits (167), Expect = 1e-12
 Identities = 33/68 (48%), Positives = 44/68 (64%)
 Frame = +1

Query: 59  SFYDLLGIPESGSLMDIKRAYKQLARKYHPDVSPPDRVKEYTKRFIQVQEAYETLSDPSR 118
           S YD+LGI  + S  +IK AY++LAR  HPDV+  DR       F+++Q AY TLSDP +
Sbjct: 196 SHYDILGISAAASNQEIKAAYRRLARLCHPDVASVDRKNSSADDFMKIQVAYSTLSDPDK 375

Query: 119 RIMYDRDM 126
           R  YDR +
Sbjct: 376 RANYDRSL 399


>TC77215 similar to PIR|T11855|T11855 DnaJ protein homolog - kidney bean
           (fragment), partial (70%)
          Length = 858

 Score = 65.9 bits (159), Expect = 9e-12
 Identities = 32/77 (41%), Positives = 43/77 (55%)
 Frame = +3

Query: 50  NDGMAAEERSFYDLLGIPESGSLMDIKRAYKQLARKYHPDVSPPDRVKEYTKRFIQVQEA 109
           N    +   S Y +LGI    S  +IK AY++LAR  HPDV+  DR       F+++  A
Sbjct: 234 NSSSHSSPASLYQILGISAGASNQEIKAAYRRLARVCHPDVAAIDRKNSSADDFMKIHSA 413

Query: 110 YETLSDPSRRIMYDRDM 126
           Y TLSDP +R  YDR +
Sbjct: 414 YSTLSDPDKRANYDRSL 464


>TC77214 similar to PIR|T11855|T11855 DnaJ protein homolog - kidney bean
           (fragment), partial (61%)
          Length = 750

 Score = 65.5 bits (158), Expect = 1e-11
 Identities = 31/68 (45%), Positives = 42/68 (61%)
 Frame = +1

Query: 59  SFYDLLGIPESGSLMDIKRAYKQLARKYHPDVSPPDRVKEYTKRFIQVQEAYETLSDPSR 118
           S Y++LGI    S  +IK AY++LAR  HPDV+  DR       F+++  AY TLSDP +
Sbjct: 250 SHYEILGISAGASNQEIKAAYRRLARVCHPDVAAIDRKNSSADDFMKIHSAYSTLSDPDK 429

Query: 119 RIMYDRDM 126
           R  YDR +
Sbjct: 430 RANYDRSL 453


>TC87441 similar to GP|21928031|gb|AAM78044.1 At3g62600/F26K9_30
           {Arabidopsis thaliana}, partial (94%)
          Length = 1563

 Score = 63.9 bits (154), Expect = 3e-11
 Identities = 30/67 (44%), Positives = 46/67 (67%)
 Frame = +2

Query: 58  RSFYDLLGIPESGSLMDIKRAYKQLARKYHPDVSPPDRVKEYTKRFIQVQEAYETLSDPS 117
           +S+YD+L + +  S   IKRAY++LA KYHPD +P +  +E  K+F ++  AYE LSD  
Sbjct: 260 KSYYDILQVSKGASDDQIKRAYRKLALKYHPDKNPGN--EEANKKFAEISNAYEVLSDNE 433

Query: 118 RRIMYDR 124
           +R +YD+
Sbjct: 434 KRNIYDK 454


>BG452391 weakly similar to GP|22135874|gb| DnaJ protein  putative
           {Arabidopsis thaliana}, partial (59%)
          Length = 612

 Score = 63.2 bits (152), Expect = 6e-11
 Identities = 29/67 (43%), Positives = 43/67 (63%), Gaps = 2/67 (2%)
 Frame = +1

Query: 59  SFYDLLGIPESGSLMDIKRAYKQLARKYHPD--VSPPDRVKEYTKRFIQVQEAYETLSDP 116
           S+Y +LG+    S+ +I+RAY++LA ++HPD     P  + E   +F  +QEAY  LSDP
Sbjct: 205 SYYSILGVSSDSSIDEIRRAYRKLAMQWHPDRWTRTPSLLSEAKCKFQNIQEAYSVLSDP 384

Query: 117 SRRIMYD 123
            +R MYD
Sbjct: 385 XKRSMYD 405


>TC89246 homologue to PIR|T06594|T06594 heat shock protein dnaJ - garden
           pea, partial (50%)
          Length = 1119

 Score = 62.8 bits (151), Expect = 8e-11
 Identities = 34/101 (33%), Positives = 55/101 (53%), Gaps = 8/101 (7%)
 Frame = +1

Query: 38  FGASFPKLKATFNDG--------MAAEERSFYDLLGIPESGSLMDIKRAYKQLARKYHPD 89
           F ++F      F+ G        + A    +Y  LG+P+S +  +IK AY++LAR+YHPD
Sbjct: 382 FPSTFSNSNTKFSSGTRPKRFHTVFAASSDYYSTLGVPKSATGKEIKAAYRRLARQYHPD 561

Query: 90  VSPPDRVKEYTKRFIQVQEAYETLSDPSRRIMYDRDMAIGI 130
           V   ++    T +F ++  AYE LSD  +R +YD+    G+
Sbjct: 562 V---NKEPGATDKFKEISNAYEVLSDDKKRALYDQYGEAGV 675


>BF631720 weakly similar to GP|10798648|em putative DNAJ protein {Nicotiana
           tabacum}, partial (25%)
          Length = 630

 Score = 62.4 bits (150), Expect = 1e-10
 Identities = 31/68 (45%), Positives = 45/68 (65%)
 Frame = +3

Query: 57  ERSFYDLLGIPESGSLMDIKRAYKQLARKYHPDVSPPDRVKEYTKRFIQVQEAYETLSDP 116
           E  +Y  LG+  + S  +IK+AY++LA KYHPD +P +  KE  + F ++ EAYE LSD 
Sbjct: 57  ETEYYTRLGVQPNASQDEIKKAYRKLAVKYHPDKNPGN--KEAEEMFKKISEAYEVLSDE 230

Query: 117 SRRIMYDR 124
            +R MYD+
Sbjct: 231 QKRQMYDQ 254


>BF005029 similar to GP|9758896|dbj| gene_id:MRG7.10~unknown protein
           {Arabidopsis thaliana}, partial (23%)
          Length = 539

 Score = 62.4 bits (150), Expect = 1e-10
 Identities = 35/93 (37%), Positives = 50/93 (53%)
 Frame = +1

Query: 61  YDLLGIPESGSLMDIKRAYKQLARKYHPDVSPPDRVKEYTKRFIQVQEAYETLSDPSRRI 120
           Y +LGI  S   ++IKRAY+ LARKYHPDVS      E    F  ++ AYE LS+ + R+
Sbjct: 226 YTVLGIARSADAVEIKRAYRLLARKYHPDVSKDLNAAE---SFKSIRHAYEVLSNETTRV 396

Query: 121 MYDRDMAIGIHLAFNACKCYNHSDQVSEQKGDW 153
            YDR++    H  +     YN   +   ++  W
Sbjct: 397 QYDRELQFS-HKPYQEKWSYNTEFEDEVRRYRW 492


>TC90060 similar to GP|23428796|gb|AAM23263.1 DnaJ-like protein {Glycine
           max}, partial (90%)
          Length = 804

 Score = 62.4 bits (150), Expect = 1e-10
 Identities = 41/129 (31%), Positives = 59/129 (44%), Gaps = 3/129 (2%)
 Frame = +1

Query: 60  FYDLLGIPESGSLMDIKRAYKQLARKYHPD--VSPPDRVKEYTKRFIQVQEAYETLSDPS 117
           +Y +LGI    S  DI+ AY++LA ++HPD     P    E  +RF Q+QEAY  LSD S
Sbjct: 241 YYSVLGIRSDASSSDIRTAYRKLAMRWHPDKFARNPTTAGEAKRRFQQIQEAYSVLSDES 420

Query: 118 RRIMYDRDMAIGIHLAFNA-CKCYNHSDQVSEQKGDWKSQLAGLQRRSDSKVAAENMSWA 176
           +R MYD  +   +       C   +    +     D    L  LQR     V  + M++ 
Sbjct: 421 KRSMYDAGLYDPLEEEDQEFCDFMSEMISMMNNVKDEGDSLEDLQRMFVEMVGGDGMNFD 600

Query: 177 ARVRQQRGE 185
               Q  G+
Sbjct: 601 MNQNQTAGK 627


>BG647719 similar to GP|10177754|dbj DnaJ protein-like {Arabidopsis
           thaliana}, partial (16%)
          Length = 702

 Score = 61.6 bits (148), Expect = 2e-10
 Identities = 32/73 (43%), Positives = 45/73 (60%)
 Frame = +3

Query: 52  GMAAEERSFYDLLGIPESGSLMDIKRAYKQLARKYHPDVSPPDRVKEYTKRFIQVQEAYE 111
           G A+  RS+YD+LG+ +  S  +IK+AY  LA+K HPD +  D   E  K+F +V  AYE
Sbjct: 237 GSASLARSYYDVLGVSKDASSSEIKKAYYGLAKKLHPDANKDD--PEAEKKFQEVTLAYE 410

Query: 112 TLSDPSRRIMYDR 124
            L D  +R  YD+
Sbjct: 411 VLKDGEKRQQYDQ 449


>TC85315 similar to GP|9758827|dbj|BAB09499.1 gene_id:MTH12.18~unknown
           protein {Arabidopsis thaliana}, partial (39%)
          Length = 713

 Score = 60.5 bits (145), Expect = 4e-10
 Identities = 30/70 (42%), Positives = 46/70 (64%)
 Frame = +2

Query: 54  AAEERSFYDLLGIPESGSLMDIKRAYKQLARKYHPDVSPPDRVKEYTKRFIQVQEAYETL 113
           A    S Y++LG+  S S+ +IK+AY++LA KYHPDV+  D  +E   +F++++ AY TL
Sbjct: 311 AKRGESPYEVLGLSPSASVNEIKKAYRKLALKYHPDVNKEDNAQE---KFLRIKHAYNTL 481

Query: 114 SDPSRRIMYD 123
            + S R  YD
Sbjct: 482 LNSSSRRKYD 511


>TC79039 similar to GP|9294537|dbj|BAB02800.1 DnaJ-like protein {Arabidopsis
           thaliana}, partial (30%)
          Length = 807

 Score = 59.7 bits (143), Expect = 7e-10
 Identities = 29/70 (41%), Positives = 43/70 (61%)
 Frame = +1

Query: 59  SFYDLLGIPESGSLMDIKRAYKQLARKYHPDVSPPDRVKEYTKRFIQVQEAYETLSDPSR 118
           S Y++L +    S M+IK AY+ LA+ YHPD +     +     FI+++ AYETLSDPS 
Sbjct: 247 SLYEVLRLNPGASAMEIKSAYRSLAKVYHPDAAARRLQECNDGDFIEIRNAYETLSDPSS 426

Query: 119 RIMYDRDMAI 128
           R +YD  + +
Sbjct: 427 RQIYDLSLMV 456


>TC90074 similar to PIR|G84590|G84590 probable heat shock protein [imported]
           - Arabidopsis thaliana, partial (88%)
          Length = 1287

 Score = 59.3 bits (142), Expect = 9e-10
 Identities = 24/65 (36%), Positives = 47/65 (71%)
 Frame = +1

Query: 60  FYDLLGIPESGSLMDIKRAYKQLARKYHPDVSPPDRVKEYTKRFIQVQEAYETLSDPSRR 119
           +Y +L + ++ +  ++K+AY++LA K+HPD +P ++ K+   +F ++ EAYE LSDP ++
Sbjct: 13  YYKILKVDKNATEEELKKAYRKLAMKWHPDKNPSNK-KDAEAKFKEISEAYEVLSDPQKK 189

Query: 120 IMYDR 124
            +YD+
Sbjct: 190 AIYDQ 204


>TC93716 similar to GP|6179940|gb|AAF05720.1| DnaJ-like protein {Nicotiana
           tabacum}, partial (33%)
          Length = 571

 Score = 59.3 bits (142), Expect = 9e-10
 Identities = 27/65 (41%), Positives = 45/65 (68%)
 Frame = +2

Query: 60  FYDLLGIPESGSLMDIKRAYKQLARKYHPDVSPPDRVKEYTKRFIQVQEAYETLSDPSRR 119
           +Y LL +  +    D+K+AY++LA K+HPD +P ++ KE   +F Q+ EAY+ LSD ++R
Sbjct: 143 YYKLLQVDRNAKDDDLKKAYRKLAMKWHPDKNPNNK-KEAEAKFKQISEAYDVLSDSNKR 319

Query: 120 IMYDR 124
            +YD+
Sbjct: 320 AVYDQ 334


>TC80183 similar to GP|4508077|gb|AAD21421.1| 62114 {Arabidopsis thaliana},
           partial (59%)
          Length = 1063

 Score = 59.3 bits (142), Expect = 9e-10
 Identities = 35/96 (36%), Positives = 53/96 (54%), Gaps = 2/96 (2%)
 Frame = +2

Query: 47  ATFNDGMA--AEERSFYDLLGIPESGSLMDIKRAYKQLARKYHPDVSPPDRVKEYTKRFI 104
           AT    MA   +E   YDLLG+ +S +  +IK+AY +L+ K+HPD +P     E  K F+
Sbjct: 476 ATICPSMAIYCDEDDCYDLLGVTQSANSSEIKKAYYKLSLKHHPDKNPD---PESRKIFV 646

Query: 105 QVQEAYETLSDPSRRIMYDRDMAIGIHLAFNACKCY 140
           ++  AYE L D + R  YD  +A    + +N  + Y
Sbjct: 647 KIANAYEILKDEATREKYDYAIAHPEEVFYNTAQYY 754


>TC87379 similar to PIR|T04618|T04618 heat shock protein homolog F20O9.160 -
           Arabidopsis thaliana, partial (75%)
          Length = 1431

 Score = 58.5 bits (140), Expect = 1e-09
 Identities = 26/65 (40%), Positives = 46/65 (70%)
 Frame = +2

Query: 60  FYDLLGIPESGSLMDIKRAYKQLARKYHPDVSPPDRVKEYTKRFIQVQEAYETLSDPSRR 119
           +Y++L + ++ +  ++K+AY++LA K+HPD +P ++    TK F  + EAYE LSDP +R
Sbjct: 95  YYEILEVDKNATDDELKKAYRKLAMKWHPDKNPDNKNDAETK-FKLISEAYEVLSDPQKR 271

Query: 120 IMYDR 124
            +YD+
Sbjct: 272 AIYDQ 286


>TC77858 similar to GP|20197886|gb|AAD22362.2 putative DnaJ protein
           {Arabidopsis thaliana}, partial (78%)
          Length = 1869

 Score = 58.5 bits (140), Expect = 1e-09
 Identities = 26/68 (38%), Positives = 44/68 (64%)
 Frame = +3

Query: 57  ERSFYDLLGIPESGSLMDIKRAYKQLARKYHPDVSPPDRVKEYTKRFIQVQEAYETLSDP 116
           +  +Y +LG+ ++ +  +IK AY++LAR YHPDV+     +E   +F ++  AYE LSD 
Sbjct: 492 DADYYTVLGVSKNSTKSEIKTAYRKLARNYHPDVNKDPGAEE---KFKEISNAYEVLSDD 662

Query: 117 SRRIMYDR 124
            +R +YD+
Sbjct: 663 EKRSIYDK 686


>TC82757 similar to PIR|T08563|T08563 dnaJ-related protein T22F8.50 -
           Arabidopsis thaliana, partial (95%)
          Length = 1317

 Score = 58.2 bits (139), Expect = 2e-09
 Identities = 30/75 (40%), Positives = 44/75 (58%)
 Frame = +2

Query: 56  EERSFYDLLGIPESGSLMDIKRAYKQLARKYHPDVSPPDRVKEYTKRFIQVQEAYETLSD 115
           +E ++YD LG+    S  DIK+AY   AR  HPD +P D   +  + F  + EAY+ LSD
Sbjct: 101 KETAYYDTLGVSVDASAADIKKAYYVKARIVHPDKNPGD--PKAAENFQLLGEAYQVLSD 274

Query: 116 PSRRIMYDRDMAIGI 130
           P +R  YD++   G+
Sbjct: 275 PEKREAYDKNGKAGV 319


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.319    0.134    0.400 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,532,848
Number of Sequences: 36976
Number of extensions: 66074
Number of successful extensions: 486
Number of sequences better than 10.0: 94
Number of HSP's better than 10.0 without gapping: 449
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 451
length of query: 186
length of database: 9,014,727
effective HSP length: 90
effective length of query: 96
effective length of database: 5,686,887
effective search space: 545941152
effective search space used: 545941152
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)


Medicago: description of AC146751.9