TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146749.13 - phase: 0 /pseudo
         (68 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

AW689142 similar to GP|20260314|gb unknown protein {Arabidopsis ...    50  2e-07
TC90733 similar to PIR|C96712|C96712 hypothetical protein F14K14...    26  3.4
TC85316 weakly similar to PIR|E84707|E84707 probable protein kin...    24  9.9
TC87404 similar to GP|22137130|gb|AAM91410.1 At1g47330/T3F24_2 {...    24  9.9

>AW689142 similar to GP|20260314|gb unknown protein {Arabidopsis thaliana},
           partial (28%)
          Length = 580

 Score = 49.7 bits (117), Expect = 2e-07
 Identities = 25/53 (47%), Positives = 35/53 (65%), Gaps = 1/53 (1%)
 Frame = +1

Query: 6   SERDFKGEASSDKSKSTLERTKEETGWPSFRQVV-DLLKLSLEEFTSSILKFM 57
           S ++FKG  S+DK     E +KE+ GWPSF Q++ DL KLSLE   ++  +FM
Sbjct: 376 SXQEFKGRESNDKRMPIPESSKEDPGWPSFGQLIADLSKLSLEAXANAFTQFM 534


>TC90733 similar to PIR|C96712|C96712 hypothetical protein F14K14.14
           [imported] - Arabidopsis thaliana, partial (18%)
          Length = 745

 Score = 25.8 bits (55), Expect = 3.4
 Identities = 14/55 (25%), Positives = 25/55 (45%)
 Frame = +1

Query: 11  KGEASSDKSKSTLERTKEETGWPSFRQVVDLLKLSLEEFTSSILKFMSNLIALGE 65
           KG      S+      KE   WP F+  +DL+++ L +  ++I K+    +   E
Sbjct: 157 KGACEKGHSEELKAMYKE---WPFFQSTIDLIEMVLGKADTTIAKYYDEALVSEE 312


>TC85316 weakly similar to PIR|E84707|E84707 probable protein kinase
           [imported] - Arabidopsis thaliana, partial (66%)
          Length = 1528

 Score = 24.3 bits (51), Expect = 9.9
 Identities = 11/24 (45%), Positives = 14/24 (57%)
 Frame = +2

Query: 15  SSDKSKSTLERTKEETGWPSFRQV 38
           SS  SKS+L R K  + W S + V
Sbjct: 446 SSISSKSSLRRAKSTSSWSSLKLV 517


>TC87404 similar to GP|22137130|gb|AAM91410.1 At1g47330/T3F24_2 {Arabidopsis
           thaliana}, partial (70%)
          Length = 1944

 Score = 24.3 bits (51), Expect = 9.9
 Identities = 12/17 (70%), Positives = 13/17 (75%)
 Frame = +1

Query: 51  SSILKFMSNLIALGEAS 67
           SS LKF SNL+AL  AS
Sbjct: 220 SSTLKFSSNLVALNIAS 270


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.310    0.126    0.333 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,404,001
Number of Sequences: 36976
Number of extensions: 10690
Number of successful extensions: 66
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 66
length of query: 68
length of database: 9,014,727
effective HSP length: 44
effective length of query: 24
effective length of database: 7,387,783
effective search space: 177306792
effective search space used: 177306792
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 51 (24.3 bits)