Medicago
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146747.7 - phase: 0 /pseudo
         (305 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC82231 similar to GP|7658344|gb|AAF66134.1| unknown protein; 15...   177  6e-45
BQ124750 similar to PIR|G86446|G864 unknown protein [imported] -...    64  6e-11
TC79555 homologue to GP|10567859|gb|AAG18593.1 L8019.5 {Leishman...    46  2e-05
TC80893 similar to GP|4557063|gb|AAD22502.1| expressed protein {...    45  3e-05
TC88762 similar to GP|22136928|gb|AAM91808.1 unknown protein {Ar...    41  5e-04
TC77438 homologue to PIR|T06807|T06807 nucleosome assembly prote...    41  7e-04
TC77949 weakly similar to GP|11762218|gb|AAG40387.1 AT4g27520 {A...    40  9e-04
TC78495 homologue to PIR|S53504|S53504 extensin-like protein S3 ...    40  9e-04
TC86742 similar to PIR|T01541|T01541 hypothetical protein A_IG00...    40  0.001
TC91646 weakly similar to GP|6523547|emb|CAB62280.1 hydroxyproli...    39  0.002
TC79359 weakly similar to PIR|S49915|S49915 extensin-like protei...    39  0.002
BQ751144 weakly similar to PIR|PQ0479|PQ04 pistil extensin-like ...    39  0.003
TC87688 similar to GP|10177535|dbj|BAB10930. gene_id:K1F13.21~un...    39  0.003
TC81858 similar to GP|18252179|gb|AAL61922.1 unknown protein {Ar...    39  0.003
AW585707 weakly similar to GP|13605599|gb| AT4g32910/F26P21_30 {...    39  0.003
TC90331 weakly similar to GP|21751020|dbj|BAC03887. unnamed prot...    39  0.003
TC77337 weakly similar to GP|4019275|gb|AAC95573.1| orf 48 {Atel...    38  0.004
TC80366 similar to GP|13877617|gb|AAK43886.1 protein kinase-like...    38  0.004
TC87439 weakly similar to GP|5139695|dbj|BAA81686.1 expressed in...    38  0.004
BQ154427 weakly similar to GP|13277220|emb ZF-HD homeobox protei...    35  0.047

>TC82231 similar to GP|7658344|gb|AAF66134.1| unknown protein; 15741-13972
           {Arabidopsis thaliana}, partial (48%)
          Length = 494

 Score =  177 bits (449), Expect(2) = 6e-45
 Identities = 106/144 (73%), Positives = 108/144 (74%), Gaps = 12/144 (8%)
 Frame = +2

Query: 24  APSRSQSPTVTSSSPAAQAASASPSPTVPPLMAHVSPSWHDPSPNSKKLRTPSNTPPALK 83
           APSRSQSPT TSS PAAQAAS  PSPT PP M HVSPSWHDP  NSKKL+T S TPP  K
Sbjct: 14  APSRSQSPTATSSLPAAQAASVLPSPTAPPPMVHVSPSWHDPFKNSKKLKTLSKTPPV*K 193

Query: 84  *GY-------LMR*RKWLMKLDPLMCCC*IMECFMRW-----N*VMSSLRLMLI*WVV*I 131
           * Y       +M *RK LMKLDPLMCC *IM CFMRW     N*VM SLRLML *WVV*I
Sbjct: 194 *RYSQRM*EIMML*RKRLMKLDPLMCC**IMVCFMRWNWRKRN*VM*SLRLMLT*WVV*I 373

Query: 132 *LKLLCLI*RRIGKILYLLLLLCF 155
           *LKLLC  * RIGKILYLLLLL F
Sbjct: 374 *LKLLCRK*-RIGKILYLLLLLLF 442



 Score = 21.2 bits (43), Expect(2) = 6e-45
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +3

Query: 154 CFITSWS 160
           CFITSWS
Sbjct: 438 CFITSWS 458


>BQ124750 similar to PIR|G86446|G864 unknown protein [imported] - Arabidopsis
           thaliana, partial (13%)
          Length = 658

 Score = 64.3 bits (155), Expect = 6e-11
 Identities = 26/32 (81%), Positives = 28/32 (87%)
 Frame = +3

Query: 272 AAGIMRIAALCFQWNWYGSIEKWHKQRKCKCL 303
           AAGIM I ALC QWNWYGSIEKWHKQRKC+ +
Sbjct: 3   AAGIMCIVALCLQWNWYGSIEKWHKQRKCQLM 98


>TC79555 homologue to GP|10567859|gb|AAG18593.1 L8019.5 {Leishmania major},
            partial (1%)
          Length = 1410

 Score = 46.2 bits (108), Expect = 2e-05
 Identities = 30/75 (40%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
 Frame = +2

Query: 11   SSSSPSSTSSSAPAPSRSQSPTVTSSSPAAQAAS-----ASPSPTVPPLMAHVSPSWHDP 65
            +SS PS+T  S+P     + P  T+SSPA  A S     ASPS +VPP     S S   P
Sbjct: 1010 ASSGPSNTCPSSPRRRSGRLPAATTSSPATNANSPPFPPASPSSSVPPAKPPTSKSARSP 1189

Query: 66   SPN-SKKLRTPSNTP 79
            +P  S+    PS++P
Sbjct: 1190 APV*SRPSPPPSSSP 1234



 Score = 39.3 bits (90), Expect = 0.002
 Identities = 28/71 (39%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
 Frame = +2

Query: 12  SSSPSSTSSSAPAPSRSQSPTVTSSSPAAQAASASPSPTVPPLMAHVSPSWHDPSPNSKK 71
           S  PSST SS   PSR  SP  T+  P     ++ PSPT  P  +    S   PS +S  
Sbjct: 479 SPQPSSTRSSPAPPSRPSSPATTTRPP----PTSKPSPTQTP--SRSPSSARTPSTSSTP 640

Query: 72  LRTP--SNTPP 80
            R P  S+ PP
Sbjct: 641 TRAPLLSSPPP 673



 Score = 33.5 bits (75), Expect = 0.10
 Identities = 26/79 (32%), Positives = 35/79 (43%), Gaps = 1/79 (1%)
 Frame = +2

Query: 1   MADAFFIFSLSSSSPSSTSSSAPAPSRSQSPTVTSSSPAAQAASASPSPTV-PPLMAHVS 59
           MA    +      SP  T      P  S  P+ T SSPA  +  +SP+ T  PP  +  S
Sbjct: 410 MASYLLVLHHHQPSPKPTL----VPP*SPQPSSTRSSPAPPSRPSSPATTTRPPPTSKPS 577

Query: 60  PSWHDPSPNSKKLRTPSNT 78
           P+   PS +    RTPS +
Sbjct: 578 PT-QTPSRSPSSARTPSTS 631


>TC80893 similar to GP|4557063|gb|AAD22502.1| expressed protein {Arabidopsis
           thaliana}, partial (39%)
          Length = 883

 Score = 45.1 bits (105), Expect = 3e-05
 Identities = 31/72 (43%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
 Frame = -1

Query: 9   SLSSSSPSSTSSSAPAPSRSQSPTVTSSSPAA--QAASASPSPTVPPLMAHVSPSWHDPS 66
           S SSSS SS+SSS+P+ S S SP+ +SSSP++   A  AS S +  P  +  SP     S
Sbjct: 559 SSSSSSSSSSSSSSPSSSSSSSPSSSSSSPSSLPPAPLASGSSSGSPSSSPSSPE*SSSS 380

Query: 67  PNSKKLRTPSNT 78
           P+S    T S++
Sbjct: 379 PSSSSSCTSSSS 344



 Score = 28.5 bits (62), Expect = 3.4
 Identities = 18/46 (39%), Positives = 26/46 (56%)
 Frame = -1

Query: 11  SSSSPSSTSSSAPAPSRSQSPTVTSSSPAAQAASASPSPTVPPLMA 56
           S SS  S SSS  +P  S S   +SSS  + ++S+S S +V  L +
Sbjct: 442 SGSSSGSPSSSPSSPE*SSSSPSSSSSCTSSSSSSSSSSSVSLLFS 305


>TC88762 similar to GP|22136928|gb|AAM91808.1 unknown protein {Arabidopsis
           thaliana}, partial (3%)
          Length = 805

 Score = 41.2 bits (95), Expect = 5e-04
 Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 12/87 (13%)
 Frame = +3

Query: 9   SLSSSSPSST--------SSSAPAPSRSQSPTVTSSSPAAQAASASP----SPTVPPLMA 56
           S ++S P+ST        ++S PA + + SP  T++SP A   ++SP    SPT  P  +
Sbjct: 126 STTTSPPASTPASSPVSTTTSPPASTPASSPVPTTTSPPAPTPASSPVSTNSPTASPAGS 305

Query: 57  HVSPSWHDPSPNSKKLRTPSNTPPALK 83
             + +   PS  +    +PS+TPP  +
Sbjct: 306 LPAAATPSPSSTTAGSPSPSSTPPGTR 386



 Score = 32.3 bits (72), Expect = 0.23
 Identities = 19/66 (28%), Positives = 32/66 (47%), Gaps = 2/66 (3%)
 Frame = +3

Query: 17  STSSSAPAPSRSQSPTVTSSSPAAQA--ASASPSPTVPPLMAHVSPSWHDPSPNSKKLRT 74
           S +  AP+P +  +PT  SSSP+A +  ++ +  P   P  + VS +   P+        
Sbjct: 42  SGNGIAPSPYQFNNPTSPSSSPSASSPVSTTTSPPASTPASSPVSTTTSPPASTPASSPV 221

Query: 75  PSNTPP 80
           P+ T P
Sbjct: 222 PTTTSP 239



 Score = 28.5 bits (62), Expect = 3.4
 Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 4/42 (9%)
 Frame = +3

Query: 11  SSSSPSSTSSSAPAPSR----SQSPTVTSSSPAAQAASASPS 48
           ++ SPSST++ +P+PS     ++S   T+   +   ASASPS
Sbjct: 318 ATPSPSSTTAGSPSPSSTPPGTRSSNETTPGRSIGVASASPS 443



 Score = 27.3 bits (59), Expect = 7.5
 Identities = 22/71 (30%), Positives = 29/71 (39%)
 Frame = +3

Query: 9  SLSSSSPSSTSSSAPAPSRSQSPTVTSSSPAAQAASASPSPTVPPLMAHVSPSWHDPSPN 68
          SL      + S +  APS  Q    TS S +  A+S   + T PP     S      SP 
Sbjct: 12 SLPPGVAQTPSGNGIAPSPYQFNNPTSPSSSPSASSPVSTTTSPPASTPAS------SPV 173

Query: 69 SKKLRTPSNTP 79
          S     P++TP
Sbjct: 174STTTSPPASTP 206


>TC77438 homologue to PIR|T06807|T06807 nucleosome assembly protein 1 - garden
            pea, partial (93%)
          Length = 1607

 Score = 40.8 bits (94), Expect = 7e-04
 Identities = 22/49 (44%), Positives = 33/49 (66%)
 Frame = -3

Query: 1    MADAFFIFSLSSSSPSSTSSSAPAPSRSQSPTVTSSSPAAQAASASPSP 49
            +AD FF+  +SSSS SS+SSS+ + S S S   +SSS ++ + S + SP
Sbjct: 1161 LADDFFLVLVSSSSSSSSSSSSSSSSSSSSSASSSSSSSSSSRSPNSSP 1015


>TC77949 weakly similar to GP|11762218|gb|AAG40387.1 AT4g27520 {Arabidopsis
           thaliana}, partial (34%)
          Length = 1297

 Score = 40.4 bits (93), Expect = 9e-04
 Identities = 28/77 (36%), Positives = 38/77 (48%), Gaps = 6/77 (7%)
 Frame = +3

Query: 11  SSSSPSSTSSSAPAPS---RSQSPTVTSSSPAAQAASASPSPTVPPLMAHVSPSWHDPSP 67
           SS SPS+   S P+PS    + SP+ +  SP A   ++SP PT  P  +  SP    P  
Sbjct: 504 SSPSPSAGGLSPPSPSPTTTTPSPSGSPPSPVAIPPASSPVPTSGPTASSPSPVVSTPPA 683

Query: 68  NSKKLRTPS---NTPPA 81
                 +PS   +TPPA
Sbjct: 684 GGPMASSPSPVVSTPPA 734



 Score = 28.1 bits (61), Expect = 4.4
 Identities = 16/38 (42%), Positives = 18/38 (47%)
 Frame = +3

Query: 30  SPTVTSSSPAAQAASASPSPTVPPLMAHVSPSWHDPSP 67
           SP    SSP+  A   SP P+  P     SPS   PSP
Sbjct: 486 SPRTPKSSPSPSAGGLSP-PSPSPTTTTPSPSGSPPSP 596


>TC78495 homologue to PIR|S53504|S53504 extensin-like protein S3 - alfalfa,
           partial (97%)
          Length = 1049

 Score = 40.4 bits (93), Expect = 9e-04
 Identities = 20/69 (28%), Positives = 32/69 (45%)
 Frame = +3

Query: 12  SSSPSSTSSSAPAPSRSQSPTVTSSSPAAQAASASPSPTVPPLMAHVSPSWHDPSPNSKK 71
           +++P +T  ++P P +S  P V SS P  Q++      T PP+ +   P    P P    
Sbjct: 288 ANTPPTTPQASPPPVQSSPPPVQSSPPPLQSSPPPAQSTPPPVQSSPPPVQQSPPPTPLT 467

Query: 72  LRTPSNTPP 80
                +TPP
Sbjct: 468 PPPVQSTPP 494



 Score = 38.9 bits (89), Expect = 0.002
 Identities = 25/68 (36%), Positives = 30/68 (43%)
 Frame = +3

Query: 13  SSPSSTSSSAPAPSRSQSPTVTSSSPAAQAASASPSPTVPPLMAHVSPSWHDPSPNSKKL 72
           SSP    SS P P++S  P V SS P  Q  S  P+P  PP +    P    P  +    
Sbjct: 357 SSPPPLQSSPP-PAQSTPPPVQSSPPPVQ-QSPPPTPLTPPPVQSTPPPASPPPASPPPF 530

Query: 73  RTPSNTPP 80
             P  TPP
Sbjct: 531 SPPPATPP 554



 Score = 32.7 bits (73), Expect = 0.18
 Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
 Frame = +3

Query: 12  SSSPSSTSSSAPAPSRSQSPTVTSSSPAAQAASASP-SPTVPPLMAHVSPSWHDPSPNSK 70
           S+SP+S S + P P  +  PT   +SP    +S  P   + PPL +   P+   P P   
Sbjct: 246 STSPNS-SPAPPTPPANTPPTTPQASPPPVQSSPPPVQSSPPPLQSSPPPAQSTPPPVQS 422

Query: 71  KLRTPSNTPP 80
                  +PP
Sbjct: 423 SPPPVQQSPP 452



 Score = 31.6 bits (70), Expect = 0.40
 Identities = 19/73 (26%), Positives = 32/73 (43%)
 Frame = +3

Query: 11  SSSSPSSTSSSAPAPSRSQSPTVTSSSPAAQAASASPSPTVPPLMAHVSPSWHDPSPNSK 70
           +  +PS++ +S+PAP     PT     P A     +P  + PP+ +   P    P P   
Sbjct: 231 AQQAPSTSPNSSPAP-----PT-----PPANTPPTTPQASPPPVQSSPPPVQSSPPPLQS 380

Query: 71  KLRTPSNTPPALK 83
                 +TPP ++
Sbjct: 381 SPPPAQSTPPPVQ 419



 Score = 30.8 bits (68), Expect = 0.68
 Identities = 26/84 (30%), Positives = 33/84 (38%), Gaps = 12/84 (14%)
 Frame = +3

Query: 10  LSSSSPSSTSSSAPA----PSRSQSPTVT--------SSSPAAQAASASPSPTVPPLMAH 57
           L SS P + S+  P     P   QSP  T        S+ P A    ASP P  PP    
Sbjct: 372 LQSSPPPAQSTPPPVQSSPPPVQQSPPPTPLTPPPVQSTPPPASPPPASPPPFSPPPATP 551

Query: 58  VSPSWHDPSPNSKKLRTPSNTPPA 81
              +    +P      TP ++PPA
Sbjct: 552 PPATPPPATPPPALTPTPLSSPPA 623



 Score = 27.3 bits (59), Expect = 7.5
 Identities = 16/62 (25%), Positives = 31/62 (49%)
 Frame = +3

Query: 9   SLSSSSPSSTSSSAPAPSRSQSPTVTSSSPAAQAASASPSPTVPPLMAHVSPSWHDPSPN 68
           +L+ +  SS  ++ PAP+ ++  +   +     + S +P+P +  L   +SPS  D S  
Sbjct: 588 ALTPTPLSSPPATTPAPAPAKLKSKAPALAPVLSPSDAPAPGLSSLSPSISPSGTDDSGA 767

Query: 69  SK 70
            K
Sbjct: 768 EK 773


>TC86742 similar to PIR|T01541|T01541 hypothetical protein A_IG005I10.16 -
           Arabidopsis thaliana, partial (19%)
          Length = 2073

 Score = 39.7 bits (91), Expect = 0.001
 Identities = 32/79 (40%), Positives = 39/79 (48%), Gaps = 1/79 (1%)
 Frame = +3

Query: 9   SLSSSSPSSTSSSAPAPSRSQSPTVTSSSPAAQAASASPSPTV-PPLMAHVSPSWHDPSP 67
           SLSSSS  S  S +P P+ S   T TSS+PA    S  PS TV  PL   + P    PSP
Sbjct: 690 SLSSSSSPSPPSPSP-PTSSHPSTTTSSTPA--PPSPPPSTTVFSPLNTLLFPPPPIPSP 860

Query: 68  NSKKLRTPSNTPPALK*GY 86
           +  K   P + P     G+
Sbjct: 861 SQTKTHFPIHLPSTTPLGF 917


>TC91646 weakly similar to GP|6523547|emb|CAB62280.1 hydroxyproline-rich
           glycoprotein DZ-HRGP {Volvox carteri f. nagariensis},
           partial (15%)
          Length = 984

 Score = 38.9 bits (89), Expect = 0.002
 Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 5/74 (6%)
 Frame = +1

Query: 12  SSSPSSTSS----SAPAPSRSQSPTVTSSSPAAQAASASPSPTVPPLMAHVSPSWHDP-S 66
           ++SPS T+S    S P P     P    S P     S SP P  PP ++  +P+   P S
Sbjct: 331 TTSPSPTASPPPRSPPRPPPRSPPRQLMSPPRPLPRSPSPPPRNPPELSRTTPTPRPPMS 510

Query: 67  PNSKKLRTPSNTPP 80
           P+      P+ TPP
Sbjct: 511 PSPSPTSPPAATPP 552



 Score = 33.9 bits (76), Expect = 0.080
 Identities = 23/70 (32%), Positives = 32/70 (44%), Gaps = 1/70 (1%)
 Frame = +1

Query: 14  SPSSTSSSAPAPSRSQSPTVTSSSPAAQAA-SASPSPTVPPLMAHVSPSWHDPSPNSKKL 72
           SP      +P+P     P ++ ++P  +   S SPSPT PP  A    S   P P  ++L
Sbjct: 415 SPPRPLPRSPSPPPRNPPELSRTTPTPRPPMSPSPSPTSPPA-ATPPVSRPPPRPALRRL 591

Query: 73  RTPSNTPPAL 82
             P   PP L
Sbjct: 592 LPPPPLPPTL 621



 Score = 27.7 bits (60), Expect = 5.7
 Identities = 24/70 (34%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
 Frame = +1

Query: 15  PSSTSSSAPAPSRSQSPTVTSSSPAAQAASASPSPTVPP--LMAHVSPSWHDPSPNSKKL 72
           PS    + P PS + SP+ T+S P    +   P P  PP  LM+   P    PSP     
Sbjct: 295 PSRLPLTTP-PSLTTSPSPTASPPPR--SPPRPPPRSPPRQLMSPPRPLPRSPSP----- 450

Query: 73  RTPSNTPPAL 82
             P   PP L
Sbjct: 451 --PPRNPPEL 474



 Score = 26.9 bits (58), Expect = 9.8
 Identities = 22/70 (31%), Positives = 27/70 (38%), Gaps = 12/70 (17%)
 Frame = +1

Query: 22  APAPSRSQSP------------TVTSSSPAAQAASASPSPTVPPLMAHVSPSWHDPSPNS 69
           AP+P  S SP            T   S   + + +ASP P  PP     SP     SP  
Sbjct: 247 APSPRPSPSPLSPLRFPSRLPLTTPPSLTTSPSPTASPPPRSPPRPPPRSPPRQLMSPPR 426

Query: 70  KKLRTPSNTP 79
              R+PS  P
Sbjct: 427 PLPRSPSPPP 456


>TC79359 weakly similar to PIR|S49915|S49915 extensin-like protein - maize,
           partial (3%)
          Length = 1170

 Score = 38.9 bits (89), Expect = 0.002
 Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
 Frame = +3

Query: 6   FIFSLSSSSPSSTSSSAPAPSRSQSPTVTSSSPAAQAASASPSPT---VPPLMAHVSPSW 62
           F  +  +SSP S+ ++ P  S S SPT + +SPA     + PS T    P   A   P  
Sbjct: 213 FAQNAPASSPKSSVTAKPPSSVSVSPTNSPASPAKSPTLSPPSQTPAVSPSGSASTPPPA 392

Query: 63  HDPSPNSKKLRTPSNTPPAL 82
             P   S  ++ PS+  PA+
Sbjct: 393 TSPPAKSPAVQPPSSVSPAI 452



 Score = 28.5 bits (62), Expect = 3.4
 Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 19/84 (22%)
 Frame = +3

Query: 14  SPSSTSSSAP------------------APSRSQSPTVTSSSPAAQAASASPSPTVPPLM 55
           SPS ++S+ P                  +P+ S S  V+S+ P +  AS+ P+  V P+ 
Sbjct: 357 SPSGSASTPPPATSPPAKSPAVQPPSSVSPAISPSNNVSSTPPVSSPASSPPTAAVSPVS 536

Query: 56  AHV-SPSWHDPSPNSKKLRTPSNT 78
           + V +PS   P P +     PS++
Sbjct: 537 SPVEAPSVSSP-PEASSAGIPSSS 605


>BQ751144 weakly similar to PIR|PQ0479|PQ04 pistil extensin-like protein
           (clone pMG14) - common tobacco (fragment), partial (11%)
          Length = 632

 Score = 38.5 bits (88), Expect = 0.003
 Identities = 25/71 (35%), Positives = 37/71 (51%), Gaps = 1/71 (1%)
 Frame = +1

Query: 13  SSPSSTSSSAPAP-SRSQSPTVTSSSPAAQAASASPSPTVPPLMAHVSPSWHDPSPNSKK 71
           S PSS  S++P+P +  +SPT   ++P +  AS+  SPT P  +    P    PSP+  +
Sbjct: 181 SLPSSPPSTSPSPHALLRSPTAPPAAPLSPPASSPSSPTRPSSLFSPPP----PSPSRSR 348

Query: 72  LRTPSNTPPAL 82
              PS   P L
Sbjct: 349 PPPPSTPSPLL 381



 Score = 30.8 bits (68), Expect = 0.68
 Identities = 25/78 (32%), Positives = 39/78 (49%), Gaps = 8/78 (10%)
 Frame = +1

Query: 13  SSPSSTSSSAPA-PSRSQ---SPTVTSSSPAAQAASASPSPTVP----PLMAHVSPSWHD 64
           ++P S  +S+P+ P+R     SP   S S +     ++PSP +P    PL    SP +  
Sbjct: 253 AAPLSPPASSPSSPTRPSSLFSPPPPSPSRSRPPPPSTPSPLLPLPLLPLATEPSP-FPP 429

Query: 65  PSPNSKKLRTPSNTPPAL 82
            SP  +   +PS +PP L
Sbjct: 430 SSPPPRPASSPSLSPPVL 483



 Score = 30.4 bits (67), Expect = 0.89
 Identities = 24/71 (33%), Positives = 29/71 (40%)
 Frame = +1

Query: 12  SSSPSSTSSSAPAPSRSQSPTVTSSSPAAQAASASPSPTVPPLMAHVSPSWHDPSPNSKK 71
           S  P S+    PA S S SP V    P+A     SPS     L     PS     P+S +
Sbjct: 415 SPFPPSSPPPRPASSPSLSPPVLLFPPSASPPPWSPSRPPSALAPPSRPSLPASPPSSPR 594

Query: 72  LRTPSNTPPAL 82
             T  +  PAL
Sbjct: 595 SSTRPSRFPAL 627


>TC87688 similar to GP|10177535|dbj|BAB10930. gene_id:K1F13.21~unknown
           protein {Arabidopsis thaliana}, partial (46%)
          Length = 2077

 Score = 38.5 bits (88), Expect = 0.003
 Identities = 29/80 (36%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
 Frame = -2

Query: 4   AFFIFSLSS-SSPSSTSSSAPAPSRSQSPTVTSSSPAAQAASASPSPTVPPLMAHVSPSW 62
           ++  F +SS SS SS+SSS+ + S S SP  +SSS ++ ++SAS   ++    + +S S+
Sbjct: 786 SYLTFPISSASSSSSSSSSSSSSSISNSPAFSSSSSSSLSSSAS---SLSSPFS*LSSSF 616

Query: 63  HDPSPNSKKLRTPSNTPPAL 82
              S NS   +  S+ PP L
Sbjct: 615 SKYSVNSSIFKNLSSIPPPL 556



 Score = 27.7 bits (60), Expect = 5.7
 Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 7/50 (14%)
 Frame = -2

Query: 6   FIFSLSSSSPS--STSSSAPAPSRSQSPTVTS-----SSPAAQAASASPS 48
           F FS SSSS S   +SSS+ + S+S SP++       S+P+  ++S+S S
Sbjct: 552 FSFSSSSSSSSSLPSSSSSSSSSKSSSPSLPPFAFFFSTPSKSSSSSSNS 403



 Score = 26.9 bits (58), Expect = 9.8
 Identities = 18/47 (38%), Positives = 26/47 (55%)
 Frame = -2

Query: 7   IFSLSSSSPSSTSSSAPAPSRSQSPTVTSSSPAAQAASASPSPTVPP 53
           IF   SS P   + S  + S S S   +SSS ++ + S+SPS  +PP
Sbjct: 591 IFKNLSSIPPPLTFSFSSSSSSSSSLPSSSSSSSSSKSSSPS--LPP 457


>TC81858 similar to GP|18252179|gb|AAL61922.1 unknown protein {Arabidopsis
           thaliana}, partial (9%)
          Length = 748

 Score = 38.5 bits (88), Expect = 0.003
 Identities = 24/89 (26%), Positives = 47/89 (51%), Gaps = 12/89 (13%)
 Frame = +1

Query: 5   FFIFSL---------SSSSPSST---SSSAPAPSRSQSPTVTSSSPAAQAASASPSPTVP 52
           FF+F+L          S+SP++    S +APAP  + +P  ++++P   +A++  S   P
Sbjct: 97  FFVFALLATTAFGEAPSTSPTAAPKASHAAPAPKATATPPSSTTTPPKSSATSPTSSPAP 276

Query: 53  PLMAHVSPSWHDPSPNSKKLRTPSNTPPA 81
            + +  SP+   P+     + +P+ +PPA
Sbjct: 277 KVSSPPSPT---PTSAEAPVESPTESPPA 354



 Score = 37.4 bits (85), Expect = 0.007
 Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
 Frame = +1

Query: 12  SSSPSSTSSSAPAPSRSQSPTVTSS-SPAAQAASASPSPTVPPLMAHVSPSWHDPSPNSK 70
           SS+ S TSS AP  S   SPT TS+ +P      + P+P  P +    SP    P+ +  
Sbjct: 241 SSATSPTSSPAPKVSSPPSPTPTSAEAPVESPTESPPAPVSPTVSPATSPVASGPAVSDA 420

Query: 71  KLRTPSNTPPA 81
               P+ +  A
Sbjct: 421 PAEAPAGSSAA 453


>AW585707 weakly similar to GP|13605599|gb| AT4g32910/F26P21_30 {Arabidopsis
           thaliana}, partial (6%)
          Length = 452

 Score = 38.5 bits (88), Expect = 0.003
 Identities = 30/85 (35%), Positives = 39/85 (45%)
 Frame = +2

Query: 11  SSSSPSSTSSSAPAPSRSQSPTVTSSSPAAQAASASPSPTVPPLMAHVSPSWHDPSPNSK 70
           S++ P S S + P    SQS   T+ SP    A  SP P   P    VSPS    SPN  
Sbjct: 116 STTEP*SHSPAKPTTILSQSTLSTTLSPVQFLALPSPGPAATP---SVSPS----SPNLL 274

Query: 71  KLRTPSNTPPALK*GYLMR*RKWLM 95
           K   P   P +LK   ++  R+ +M
Sbjct: 275 KPPMPETVPKSLKLSSVVEIRRLMM 349


>TC90331 weakly similar to GP|21751020|dbj|BAC03887. unnamed protein product
           {Homo sapiens}, partial (25%)
          Length = 557

 Score = 38.5 bits (88), Expect = 0.003
 Identities = 25/70 (35%), Positives = 38/70 (53%)
 Frame = +1

Query: 9   SLSSSSPSSTSSSAPAPSRSQSPTVTSSSPAAQAASASPSPTVPPLMAHVSPSWHDPSPN 68
           S SS+S SSTSSS+ +PS   SP+  S++P+ + +S     T  P     S S    SP+
Sbjct: 340 SSSSTSSSSTSSSSSSPSSFSSPSSMSAAPSLRGSSCPTG*TRYPAPKSSSSSSSSNSPS 519

Query: 69  SKKLRTPSNT 78
           S    + S++
Sbjct: 520 SSSPSSSSSS 549



 Score = 32.7 bits (73), Expect = 0.18
 Identities = 29/93 (31%), Positives = 39/93 (41%), Gaps = 19/93 (20%)
 Frame = +1

Query: 6   FIFSLSSSSPSSTSSS-----------------APAPSRSQSPTVTSSSPAAQAASASPS 48
           F+ + SSSS SS SSS                 A + S S S T +SSS  +  +S S  
Sbjct: 238 FVNAASSSSSSSASSSLSLFLLGCEEAGGNTS*ASSSSTSSSSTSSSSSSPSSFSSPSSM 417

Query: 49  PTVPPLMAHVSPS--WHDPSPNSKKLRTPSNTP 79
              P L     P+     P+P S    + SN+P
Sbjct: 418 SAAPSLRGSSCPTG*TRYPAPKSSSSSSSSNSP 516


>TC77337 weakly similar to GP|4019275|gb|AAC95573.1| orf 48 {Ateline
           herpesvirus 3}, partial (8%)
          Length = 986

 Score = 38.1 bits (87), Expect = 0.004
 Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 7/72 (9%)
 Frame = -2

Query: 5   FFIF------SLSSSSPSSTSSSAPAPSRSQSPTVTSSSPAAQAASASPSPTVPPLMAHV 58
           FF+F      S SSSS SS+ SS+  PS S S   +SSS ++ ++S+S S + P   +  
Sbjct: 775 FFLFFGGCKASSSSSSSSSSLSSSSTPSSSSSSPPSSSSSSSSSSSSSSSWSSPSSSSSS 596

Query: 59  SP-SWHDPSPNS 69
           SP S   P+P S
Sbjct: 595 SPFSSAPPAPPS 560



 Score = 34.7 bits (78), Expect = 0.047
 Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 10/81 (12%)
 Frame = -2

Query: 12  SSSPSSTSSSAPAPSRSQSPTVTSSSPAAQAASASPSPT------VPPLMAHVSPSWHD- 64
           SSS SS+SSS+ + S S   + +SSSP + A  A PS        +  L+ +  PS  D 
Sbjct: 670 SSSSSSSSSSSSSSSWSSPSSSSSSSPFSSAPPAPPSGAFFELLLLLELLPYPPPSSDDN 491

Query: 65  ---PSPNSKKLRTPSNTPPAL 82
              PSPN+    + S++  +L
Sbjct: 490 SSSPSPNAPSPSSSSSSSSSL 428



 Score = 34.7 bits (78), Expect = 0.047
 Identities = 28/85 (32%), Positives = 40/85 (46%), Gaps = 12/85 (14%)
 Frame = -2

Query: 9   SLSSSSPSSTSSSAPAPSRSQSPTVTSSSPAAQAASA------------SPSPTVPPLMA 56
           S SSSS SS+SSS  +PS S S +  SS+P A  + A             P P+     +
Sbjct: 664 SSSSSSSSSSSSSWSSPSSSSSSSPFSSAPPAPPSGAFFELLLLLELLPYPPPSSDDNSS 485

Query: 57  HVSPSWHDPSPNSKKLRTPSNTPPA 81
             SP+   PS +S    +  ++P A
Sbjct: 484 SPSPNAPSPSSSSSSSSSLPSSPSA 410


>TC80366 similar to GP|13877617|gb|AAK43886.1 protein kinase-like protein
           {Arabidopsis thaliana}, partial (16%)
          Length = 814

 Score = 38.1 bits (87), Expect = 0.004
 Identities = 25/69 (36%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
 Frame = +3

Query: 14  SPSSTSSSAPAPSRSQSPTVTSSSPAAQAASASP-SPTVPPLMAHVSPSWHDPSPNSKKL 72
           +PS+   S PA   S  P+ T S+P     S SP SP   P ++  S     PSP     
Sbjct: 69  TPSAPPPSTPATPSSPPPSTTPSAPPPSTPSNSPPSPPTTPAISPPSGGGTTPSP----- 233

Query: 73  RTPSNTPPA 81
             PS TPP+
Sbjct: 234 --PSRTPPS 254



 Score = 36.2 bits (82), Expect = 0.016
 Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
 Frame = +3

Query: 13 SSPSSTSSSAPAPSRSQSP---TVTSSSPAAQAASASPSP-TVPPLMAHVSPSWHDPSPN 68
          SSP   + S+P PS   +P   T ++  P+  A  +SP P T P      +PS   PSP 
Sbjct: 3  SSPPPATPSSPPPSTPANPPPVTPSAPPPSTPATPSSPPPSTTPSAPPPSTPSNSPPSPP 182

Query: 69 SKKLRTPSNTPPA 81
          +    TP+ +PP+
Sbjct: 183T----TPAISPPS 209


>TC87439 weakly similar to GP|5139695|dbj|BAA81686.1 expressed in cucumber
           hypocotyls {Cucumis sativus}, partial (57%)
          Length = 897

 Score = 38.1 bits (87), Expect = 0.004
 Identities = 23/59 (38%), Positives = 29/59 (48%), Gaps = 3/59 (5%)
 Frame = +3

Query: 26  SRSQSPTVTSSSPAAQAASASP---SPTVPPLMAHVSPSWHDPSPNSKKLRTPSNTPPA 81
           S S +PT + S+PAA    +SP    PT P   A V+     P   S K   P+ TPPA
Sbjct: 105 SPSAAPTTSPSTPAATTPVSSPVAAPPTTPTTPAPVASPKSSPPATSPKAAAPTATPPA 281



 Score = 29.3 bits (64), Expect = 2.0
 Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
 Frame = +3

Query: 11  SSSSPSST--SSSAPAPSRSQSPTVTSSSPAAQAASASPSPTVPPLMAHVSPSWHDPSPN 68
           +SS P+ T  S+  PAP   +SP   +   +  A +   +PT  P +   +PS      N
Sbjct: 282 ASSPPAVTPVSTPPPAPVPVKSPPTPAPVSSPPAVTPVAAPTTTPAVPAPAPS--KGKKN 455

Query: 69  SKKLRTPSNTPPAL 82
            KK   P+ +P  L
Sbjct: 456 KKKHGAPAPSPALL 497



 Score = 28.5 bits (62), Expect = 3.4
 Identities = 16/68 (23%), Positives = 31/68 (45%)
 Frame = +3

Query: 12  SSSPSSTSSSAPAPSRSQSPTVTSSSPAAQAASASPSPTVPPLMAHVSPSWHDPSPNSKK 71
           +S  SS  +++P  +   +    +SSP A    ++P P   P+ +  +P+     P    
Sbjct: 213 ASPKSSPPATSPKAAAPTATPPAASSPPAVTPVSTPPPAPVPVKSPPTPAPVSSPPAVTP 392

Query: 72  LRTPSNTP 79
           +  P+ TP
Sbjct: 393 VAAPTTTP 416


>BQ154427 weakly similar to GP|13277220|emb ZF-HD homeobox protein
          {Flaveria bidentis}, partial (28%)
          Length = 645

 Score = 34.7 bits (78), Expect = 0.047
 Identities = 23/72 (31%), Positives = 33/72 (44%), Gaps = 6/72 (8%)
 Frame = +2

Query: 15 PSSTSSSAPAPSR---SQSPTVTSSSPAAQAASASPSPTVPPLMAHVSPSWHDPSPNSKK 71
          P       P P R   SQS + + S+  + + S   SP+ PP ++H+ PS+H  S     
Sbjct: 23 PPQPPPPLPLPHRGPISQSTSPSQSTSPSHSPSPIXSPSSPPPLSHLPPSYHHSSAPHML 202

Query: 72 LRTPSN---TPP 80
          L    N   TPP
Sbjct: 203LALGGNAYSTPP 238


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.337    0.143    0.471 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,900,649
Number of Sequences: 36976
Number of extensions: 204823
Number of successful extensions: 6385
Number of sequences better than 10.0: 487
Number of HSP's better than 10.0 without gapping: 4136
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5366
length of query: 305
length of database: 9,014,727
effective HSP length: 96
effective length of query: 209
effective length of database: 5,465,031
effective search space: 1142191479
effective search space used: 1142191479
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.8 bits)
S2: 58 (26.9 bits)


Medicago: description of AC146747.7