TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146722.4 - phase: 1 
         (88 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

BG647724 similar to GP|11141605|gb LEUNIG {Arabidopsis thaliana}...   175  2e-45
TC80769 similar to GP|11141605|gb|AAG32022.1 LEUNIG {Arabidopsis...    78  4e-31
TC79322 similar to GP|13605815|gb|AAK32893.1 At2g32700/F24L7.16 ...   120  1e-28
TC87928 similar to PIR|A96839|A96839 F23A5.2(form2) [imported] -...    57  9e-10
TC87616 similar to PIR|A96839|A96839 F23A5.2(form2) [imported] -...    55  4e-09
TC79260 weakly similar to GP|9759350|dbj|BAB10005.1 WD-repeat pr...    49  3e-07
TC88481 similar to PIR|T00806|T02445 probable U4/U6 small nuclea...    48  6e-07
TC85659 SP|O24076|GBLP_MEDSA Guanine nucleotide-binding protein ...    48  6e-07
TC78188 similar to PIR|C84870|C84870 probable splicing factor [i...    47  2e-06
TC82717 weakly similar to GP|21539583|gb|AAM53344.1 putative coa...    45  4e-06
TC79118 similar to GP|16323188|gb|AAL15328.1 AT5g67320/K8K14_4 {...    44  1e-05
BQ147028 similar to GP|16323188|gb| AT5g67320/K8K14_4 {Arabidops...    44  1e-05
BF631811 similar to GP|9759350|dbj WD-repeat protein-like {Arabi...    43  2e-05
TC89149 similar to GP|20466231|gb|AAM20433.1 cell cycle switch p...    43  2e-05
TC78591 similar to GP|9759350|dbj|BAB10005.1 WD-repeat protein-l...    42  4e-05
BG586181 similar to GP|4689316|gb| peroxisomal targeting signal ...    42  4e-05
BG457241 homologue to PIR|F84600|F8 coatomer alpha subunit [impo...    41  7e-05
BG648991 similar to PIR|C86239|C86 protein T10O24.21 [imported] ...    41  9e-05
TC84162 similar to GP|15810485|gb|AAL07130.1 putative WD40-repea...    40  1e-04
TC77248 similar to GP|13489182|gb|AAK27816.1 putative WD-repeat ...    40  1e-04

>BG647724 similar to GP|11141605|gb LEUNIG {Arabidopsis thaliana}, partial
           (25%)
          Length = 757

 Score =  175 bits (444), Expect = 2e-45
 Identities = 86/86 (100%), Positives = 86/86 (100%)
 Frame = +2

Query: 1   FTFSELNSVRASTNKVVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITD 60
           FTFSELNSVRASTNKVVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITD
Sbjct: 395 FTFSELNSVRASTNKVVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITD 574

Query: 61  VRFSPSMPRLATSSYDKTVRVWDVDN 86
           VRFSPSMPRLATSSYDKTVRVWDVDN
Sbjct: 575 VRFSPSMPRLATSSYDKTVRVWDVDN 652


>TC80769 similar to GP|11141605|gb|AAG32022.1 LEUNIG {Arabidopsis thaliana},
           partial (40%)
          Length = 1362

 Score = 78.2 bits (191), Expect(2) = 4e-31
 Identities = 37/50 (74%), Positives = 43/50 (86%), Gaps = 1/50 (2%)
 Frame = +2

Query: 1   FTFSELNSVRASTNKVVCSHFSSDGKLLASGGHDKKVVLWYTD-SLKQKA 49
           FTFS++NSVRAS++K+ C HFSSDGKLLASGGHDKK V+WY    LKQKA
Sbjct: 326 FTFSDVNSVRASSSKIACCHFSSDGKLLASGGHDKKAVIWYRRIHLKQKA 475



 Score = 71.2 bits (173), Expect(2) = 4e-31
 Identities = 34/40 (85%), Positives = 36/40 (90%)
 Frame = +3

Query: 47  QKATLEEHSLLITDVRFSPSMPRLATSSYDKTVRVWDVDN 86
           +K  LEEHS LITDVRFS SMPRLATSS+DKTVRVWDVDN
Sbjct: 468 KKPILEEHSALITDVRFSASMPRLATSSFDKTVRVWDVDN 587



 Score = 26.2 bits (56), Expect = 2.3
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = +3

Query: 50   TLEEHSLLITDVRFSPSMPRLATSSYDKTVRVW 82
            TL  H  LIT +  S     +A++S+DK +++W
Sbjct: 1095 TLSAHDGLITALAVSTVNGLVASASHDKFIKLW 1193


>TC79322 similar to GP|13605815|gb|AAK32893.1 At2g32700/F24L7.16
           {Arabidopsis thaliana}, partial (59%)
          Length = 1824

 Score =  120 bits (300), Expect = 1e-28
 Identities = 56/88 (63%), Positives = 72/88 (81%)
 Frame = +2

Query: 1   FTFSELNSVRASTNKVVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITD 60
           F+FSE++S+R S  KVVC HFSSDGKLLAS GHDKKVVLW  ++LK ++T EEH+++ITD
Sbjct: 764 FSFSEVSSIRKSNGKVVCCHFSSDGKLLASAGHDKKVVLWNMETLKTQSTPEEHTVIITD 943

Query: 61  VRFSPSMPRLATSSYDKTVRVWDVDNVS 88
           VRF P+  +LATSS+D TVR+WD  + S
Sbjct: 944 VRFRPNSTQLATSSFDTTVRLWDAADPS 1027



 Score = 32.7 bits (73), Expect = 0.025
 Identities = 20/65 (30%), Positives = 35/65 (53%)
 Frame = +2

Query: 18   CSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSPSMPRLATSSYDK 77
            C    S   LL  GG+ + + LW+    K   T+  H  +I+ +  SP    +A++S+DK
Sbjct: 1442 CVFHPSYSNLLVIGGY-QSLELWHMAENKCM-TIPAHEGVISALAQSPVTGMVASASHDK 1615

Query: 78   TVRVW 82
            +V++W
Sbjct: 1616 SVKIW 1630


>TC87928 similar to PIR|A96839|A96839 F23A5.2(form2) [imported] -
           Arabidopsis thaliana, partial (95%)
          Length = 1519

 Score = 57.4 bits (137), Expect = 9e-10
 Identities = 29/73 (39%), Positives = 41/73 (55%)
 Frame = +2

Query: 11  ASTNKVVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSPSMPRL 70
           A  + V+CS +  DG  + SGG DK+V +W   S  Q  T+  H   I D+ + P M  L
Sbjct: 374 AHDHPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPITVAMHDAPIKDIAWIPEMNLL 553

Query: 71  ATSSYDKTVRVWD 83
           AT S+DK ++ WD
Sbjct: 554 ATGSWDKNIKYWD 592



 Score = 26.9 bits (58), Expect = 1.4
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +2

Query: 58  ITDVRFSPSMPRLATSSYDKTVRVWDV 84
           ++ + FSP    L  +S+D  VR W+V
Sbjct: 245 VSSLNFSPKSNLLVATSWDNQVRCWEV 325


>TC87616 similar to PIR|A96839|A96839 F23A5.2(form2) [imported] -
           Arabidopsis thaliana, partial (96%)
          Length = 1471

 Score = 55.5 bits (132), Expect = 4e-09
 Identities = 28/68 (41%), Positives = 38/68 (55%)
 Frame = +3

Query: 16  VVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSPSMPRLATSSY 75
           V+CS +  DG  + SGG DK+  +W   S  Q  T+  H   I ++ + P M  LAT S 
Sbjct: 348 VLCSAWKDDGTTVFSGGCDKQAKMWPLLSGGQPVTVAMHDAPIKEIAWIPEMSLLATGSL 527

Query: 76  DKTVRVWD 83
           DKTV+ WD
Sbjct: 528 DKTVKYWD 551



 Score = 26.2 bits (56), Expect = 2.3
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +3

Query: 58  ITDVRFSPSMPRLATSSYDKTVRVWDV 84
           I+ + FSP    L  +S+D  VR W++
Sbjct: 207 ISSLSFSPKANFLVATSWDNQVRCWEI 287


>TC79260 weakly similar to GP|9759350|dbj|BAB10005.1 WD-repeat protein-like
           {Arabidopsis thaliana}, partial (50%)
          Length = 1227

 Score = 48.9 bits (115), Expect = 3e-07
 Identities = 27/82 (32%), Positives = 42/82 (50%), Gaps = 3/82 (3%)
 Frame = +2

Query: 6   LNSVRASTNKVVCSHFSSDGKLLASGGHDKKVVLWYTDS---LKQKATLEEHSLLITDVR 62
           L  + A  ++V    FS DGK LA+  +D+  ++W  D+   L  K  L  H   ++ V 
Sbjct: 524 LQILDAHDDEVWFVQFSHDGKYLATASNDRTAIIWEVDTNDGLSMKHKLSGHQKSVSSVS 703

Query: 63  FSPSMPRLATSSYDKTVRVWDV 84
           +SP+   L T   ++ VR WDV
Sbjct: 704 WSPNGQELLTCGVEEAVRRWDV 769



 Score = 29.6 bits (65), Expect = 0.21
 Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 8/60 (13%)
 Frame = +2

Query: 34  DKKVVLWYTDSLKQKATLEEHSLLITD--------VRFSPSMPRLATSSYDKTVRVWDVD 85
           DK++ L Y+D    K  +   +L I D        V+FS     LAT+S D+T  +W+VD
Sbjct: 461 DKEMSL-YSDHHCGKTQIPSRTLQILDAHDDEVWFVQFSHDGKYLATASNDRTAIIWEVD 637


>TC88481 similar to PIR|T00806|T02445 probable U4/U6 small nuclear
            ribonucleoprotein [imported] - Arabidopsis thaliana,
            partial (60%)
          Length = 1836

 Score = 48.1 bits (113), Expect = 6e-07
 Identities = 32/82 (39%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
 Frame = +1

Query: 3    FSELNSVRASTNKVVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVR 62
            FSE+   R  T    CS FS DGK LA+        LW   ++K+ +TL+ H+   TDV 
Sbjct: 931  FSEIGDDRPLTG---CS-FSRDGKGLATCSFTGATKLWSMPNVKKVSTLKGHTQRATDVA 1098

Query: 63   FSP-SMPRLATSSYDKTVRVWD 83
            +SP     LAT+S D+T + W+
Sbjct: 1099 YSPVHKNHLATASADRTAKYWN 1164



 Score = 47.4 bits (111), Expect = 1e-06
 Identities = 26/63 (41%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
 Frame = +1

Query: 21   FSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSPSMPR-LATSSYDKTV 79
            FS +G  LA+GG D    +W     K   T+  HS LI+ V+F P     L T+SYD T 
Sbjct: 1477 FSPNGYHLATGGEDNTCRIWDLRKKKSLYTIPAHSNLISQVKFEPQEGYFLVTASYDMTA 1656

Query: 80   RVW 82
            +VW
Sbjct: 1657 KVW 1665



 Score = 43.9 bits (102), Expect = 1e-05
 Identities = 28/83 (33%), Positives = 36/83 (42%)
 Frame = +1

Query: 2    TFSELNSVRASTNKVVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDV 61
            T  EL      +  V    F  DG L AS G D    +W   + +    LE H   I  +
Sbjct: 1294 TEEELLLQEGHSRSVYGLDFHHDGSLAASCGLDALARVWDLRTGRSVLALEGHVKSILGI 1473

Query: 62   RFSPSMPRLATSSYDKTVRVWDV 84
             FSP+   LAT   D T R+WD+
Sbjct: 1474 SFSPNGYHLATGGEDNTCRIWDL 1542



 Score = 33.1 bits (74), Expect = 0.019
 Identities = 18/78 (23%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
 Frame = +1

Query: 6    LNSVRASTNKVVCSHFS-SDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFS 64
            L ++ A +N +    F   +G  L +  +D    +W +   K   TL  H   +T +   
Sbjct: 1558 LYTIPAHSNLISQVKFEPQEGYFLVTASYDMTAKVWSSRDFKPVKTLSGHEAKVTSLDVL 1737

Query: 65   PSMPRLATSSYDKTVRVW 82
                 + T S+D+T+++W
Sbjct: 1738 GDGGYIVTVSHDRTIKLW 1791


>TC85659 SP|O24076|GBLP_MEDSA Guanine nucleotide-binding protein beta
           subunit-like protein. [Alfalfa] {Medicago sativa},
           complete
          Length = 1261

 Score = 48.1 bits (113), Expect = 6e-07
 Identities = 28/79 (35%), Positives = 47/79 (59%), Gaps = 5/79 (6%)
 Frame = +2

Query: 13  TNKVVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEE---HSLLITDVRFSPS--M 67
           T  V+   FS D + + S   D+ + LW T   + K T+++   HS  ++ VRFSPS   
Sbjct: 374 TKDVLSVAFSIDNRQIVSASRDRTIKLWNTLG-ECKYTIQDGDAHSDWVSCVRFSPSTLQ 550

Query: 68  PRLATSSYDKTVRVWDVDN 86
           P + ++S+D+TV+VW++ N
Sbjct: 551 PTIVSASWDRTVKVWNLTN 607



 Score = 37.4 bits (85), Expect = 0.001
 Identities = 22/67 (32%), Positives = 40/67 (58%)
 Frame = +2

Query: 22  SSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSPSMPRLATSSYDKTVRV 81
           S DG L ASGG D  ++LW     K+  +L+  S +I  + FSP+   L  ++ + ++++
Sbjct: 665 SPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGS-IIHALCFSPNRYWLCAAT-ESSIKI 838

Query: 82  WDVDNVS 88
           WD+++ S
Sbjct: 839 WDLESKS 859



 Score = 35.8 bits (81), Expect = 0.003
 Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
 Frame = +2

Query: 19  SHF------SSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSPSMPRLAT 72
           SHF      SSDG+   SG  D ++ LW  ++         H+  +  V FS    ++ +
Sbjct: 248 SHFVQDVVLSSDGQFALSGSWDGELRLWDLNAGTSARRFVGHTKDVLSVAFSIDNRQIVS 427

Query: 73  SSYDKTVRVWD 83
           +S D+T+++W+
Sbjct: 428 ASRDRTIKLWN 460


>TC78188 similar to PIR|C84870|C84870 probable splicing factor [imported] -
           Arabidopsis thaliana, partial (95%)
          Length = 1436

 Score = 46.6 bits (109), Expect = 2e-06
 Identities = 21/66 (31%), Positives = 38/66 (56%), Gaps = 1/66 (1%)
 Frame = +1

Query: 21  FSSDGKLLASGGHDKKVVLWYT-DSLKQKATLEEHSLLITDVRFSPSMPRLATSSYDKTV 79
           F+  G ++ASG HDK++ LW      K    L+ H   + D+ ++    ++ ++S DKT+
Sbjct: 337 FNPTGSVVASGSHDKEIFLWNVHGDCKNFMVLKGHKNAVLDLHWTSDGTQIISASPDKTL 516

Query: 80  RVWDVD 85
           R+WD +
Sbjct: 517 RLWDTE 534



 Score = 40.0 bits (92), Expect = 2e-04
 Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
 Frame = +1

Query: 9   VRASTNKVVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITD---VRFSP 65
           ++   N V+  H++SDG  + S   DK + LW T++ KQ   + EH   +      R  P
Sbjct: 430 LKGHKNAVLDLHWTSDGTQIISASPDKTLRLWDTETGKQIKKMVEHLSYVNSCCPTRRGP 609

Query: 66  SMPRLATSSYDKTVRVWDV 84
             P + + S D T ++WD+
Sbjct: 610 --PLVVSGSDDGTAKLWDM 660



 Score = 26.2 bits (56), Expect = 2.3
 Identities = 10/34 (29%), Positives = 21/34 (61%)
 Frame = +1

Query: 51  LEEHSLLITDVRFSPSMPRLATSSYDKTVRVWDV 84
           L  H   +  ++F+P+   +A+ S+DK + +W+V
Sbjct: 301 LTGHQSAVYTMKFNPTGSVVASGSHDKEIFLWNV 402


>TC82717 weakly similar to GP|21539583|gb|AAM53344.1 putative coatomer
           complex subunit {Arabidopsis thaliana}, partial (29%)
          Length = 1118

 Score = 45.4 bits (106), Expect = 4e-06
 Identities = 23/62 (37%), Positives = 33/62 (53%)
 Frame = +1

Query: 22  SSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSPSMPRLATSSYDKTVRV 81
           S+D + L SG  D    +W  DS     TLE H   +T +   P +P + T+S D TV++
Sbjct: 676 SNDKQYLLSGSDDYTAKVWDYDSKNCVQTLEGHKNNVTAICAHPEIPIIITASEDSTVKI 855

Query: 82  WD 83
           WD
Sbjct: 856 WD 861


>TC79118 similar to GP|16323188|gb|AAL15328.1 AT5g67320/K8K14_4 {Arabidopsis
           thaliana}, partial (44%)
          Length = 1098

 Score = 43.9 bits (102), Expect = 1e-05
 Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 9/80 (11%)
 Frame = +2

Query: 15  KVVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSPSMP------ 68
           +V C  +   G LLAS   D    +W     K      EHS  I  +R+SP+ P      
Sbjct: 323 EVNCVKWDPTGTLLASCSDDITAKIWSVKQDKYLHDFREHSKEIYTIRWSPTGPGTNNPN 502

Query: 69  ---RLATSSYDKTVRVWDVD 85
               LA++S+D TV++WD++
Sbjct: 503 KKLLLASASFDSTVKLWDIE 562



 Score = 37.4 bits (85), Expect = 0.001
 Identities = 20/58 (34%), Positives = 30/58 (51%)
 Frame = +2

Query: 27  LLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSPSMPRLATSSYDKTVRVWDV 84
           LLAS   D  V LW  +  K   +L  H   +  V FSP+   +A+ S DK++ +W +
Sbjct: 512 LLASASFDSTVKLWDIELGKLIHSLNGHRHPVYSVAFSPNGEYIASGSLDKSLHIWSL 685


>BQ147028 similar to GP|16323188|gb| AT5g67320/K8K14_4 {Arabidopsis
           thaliana}, partial (14%)
          Length = 658

 Score = 43.5 bits (101), Expect = 1e-05
 Identities = 25/81 (30%), Positives = 39/81 (47%), Gaps = 9/81 (11%)
 Frame = +3

Query: 14  NKVVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSPSMPR---- 69
           ++V C  +   G LLAS   D    +W     K      EHS  +  +R+SP+ P     
Sbjct: 405 SEVNCIKWDPTGSLLASCSDDNTAKIWSMKQDKYIHDFREHSKEVYTIRWSPTGPGTNNP 584

Query: 70  -----LATSSYDKTVRVWDVD 85
                LA++S+D TV++WD +
Sbjct: 585 NKKLVLASASFDSTVKLWDAE 647


>BF631811 similar to GP|9759350|dbj WD-repeat protein-like {Arabidopsis
           thaliana}, partial (21%)
          Length = 575

 Score = 43.1 bits (100), Expect = 2e-05
 Identities = 20/62 (32%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
 Frame = +3

Query: 28  LASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSPSMPR-LATSSYDKTVRVWDVDN 86
           +ASG  D +V +W+  S +    L  HS  +  V ++P+ P  LA++S D+T+R+W +++
Sbjct: 216 IASGSEDSQVYIWHRSSGEPIEALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLNS 395

Query: 87  VS 88
           ++
Sbjct: 396 LN 401


>TC89149 similar to GP|20466231|gb|AAM20433.1 cell cycle switch protein
           {Arabidopsis thaliana}, partial (71%)
          Length = 1283

 Score = 42.7 bits (99), Expect = 2e-05
 Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
 Frame = +2

Query: 21  FSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSPSMPRLATS---SYDK 77
           +S D + LASGG+D ++++W   S +    L EH+  +  + +SP    L  S   + D+
Sbjct: 569 WSCDDRELASGGNDNQLLVWNQHSQQPTLRLTEHTAAVKAIAWSPHQSNLLVSGGGTADR 748

Query: 78  TVRVWDVDN 86
            +R W+  N
Sbjct: 749 CIRFWNTTN 775



 Score = 40.4 bits (93), Expect = 1e-04
 Identities = 22/81 (27%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
 Frame = +2

Query: 5   ELNSVRASTNKVVCSHFSSDGKLLASGGHDK-KVVLWYTDSLKQKATLEEHSLLITDVRF 63
           +LNSV   +     +   +  +L+++ G+ + ++++W   SL + ATL  HS+ +  +  
Sbjct: 782 QLNSVDTGSQVCNLAWSKNVNELVSTHGYSQNQIMVWKYPSLAKVATLTGHSMRVLYLAM 961

Query: 64  SPSMPRLATSSYDKTVRVWDV 84
           SP    + T + D+T+R W+V
Sbjct: 962 SPDGQTIVTGAGDETLRFWNV 1024


>TC78591 similar to GP|9759350|dbj|BAB10005.1 WD-repeat protein-like
           {Arabidopsis thaliana}, partial (17%)
          Length = 916

 Score = 42.0 bits (97), Expect = 4e-05
 Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
 Frame = +2

Query: 21  FSSDGKLLASGGHDKKVVLWY--TDSLKQKATLEEHSLLITDVRFSPSMPRLATSSYDKT 78
           FS +GK LAS  +D+  ++W    + +  K  L  H   I+ V +SP+   L T   +++
Sbjct: 488 FSHNGKYLASASNDQTAIIWEVGVNGVCVKHRLSGHQKPISSVSWSPNDEELLTCGVEES 667

Query: 79  VRVWDV 84
           +R WDV
Sbjct: 668 IRRWDV 685


>BG586181 similar to GP|4689316|gb| peroxisomal targeting signal type 2
           receptor {Arabidopsis thaliana}, partial (56%)
          Length = 804

 Score = 42.0 bits (97), Expect = 4e-05
 Identities = 26/68 (38%), Positives = 34/68 (49%), Gaps = 2/68 (2%)
 Frame = +1

Query: 18  CSHFSSDGKLLASGGHDKKVVLWYTDSLKQK-ATLEEHSLLITDVRFSPSMPRLATS-SY 75
           C     D  ++A+G  DK V +W   S +   A L  H   +  V+FSP +  L  S SY
Sbjct: 184 CDWNKYDECIIATGSVDKSVKVWDVRSYRVPVAVLNGHGYAVRKVKFSPHVRNLLVSCSY 363

Query: 76  DKTVRVWD 83
           D TV VWD
Sbjct: 364 DMTVCVWD 387



 Score = 25.4 bits (54), Expect = 4.0
 Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = +1

Query: 50 TLEEHSLLITDVRFSPSMPRL-ATSSYDKTVRVWDV 84
          T +EH+  +    ++P    + A++S D TVR+WDV
Sbjct: 22 TFKEHAYCVYSSVWNPRHADVFASASGDCTVRIWDV 129


>BG457241 homologue to PIR|F84600|F8 coatomer alpha subunit [imported] -
           Arabidopsis thaliana, partial (15%)
          Length = 654

 Score = 41.2 bits (95), Expect = 7e-05
 Identities = 21/64 (32%), Positives = 33/64 (50%)
 Frame = +1

Query: 20  HFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSPSMPRLATSSYDKTV 79
           HF +   L  SGG D K+ +W     +   TL  H   I  V+F    P + ++S D+T+
Sbjct: 244 HFHNSQPLFVSGGDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHESPWIVSASDDQTI 423

Query: 80  RVWD 83
           R+W+
Sbjct: 424 RIWN 435



 Score = 35.4 bits (80), Expect = 0.004
 Identities = 17/67 (25%), Positives = 32/67 (47%)
 Frame = +1

Query: 21  FSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSPSMPRLATSSYDKTVR 80
           F  +   + S   D+ + +W   S    + L  H+  +    F P    + ++S D+TVR
Sbjct: 373 FHHESPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCALFHPKDDLVVSASLDQTVR 552

Query: 81  VWDVDNV 87
           VWD+ ++
Sbjct: 553 VWDIGSL 573



 Score = 25.4 bits (54), Expect = 4.0
 Identities = 13/42 (30%), Positives = 21/42 (49%)
 Frame = +1

Query: 16  VVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLL 57
           V+C+ F     L+ S   D+ V +W   SLK+K+      +L
Sbjct: 484 VMCALFHPKDDLVVSASLDQTVRVWDIGSLKRKSASXADDIL 609


>BG648991 similar to PIR|C86239|C86 protein T10O24.21 [imported] -
           Arabidopsis thaliana, partial (35%)
          Length = 702

 Score = 40.8 bits (94), Expect = 9e-05
 Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
 Frame = +3

Query: 21  FSSDGKLLASGGHDKKVVLWYT-DSLKQKATLEEHSLLITDVRFSPSMPRLATSSYDKTV 79
           F + G L+ S G D KV +W   ++ K   T   HS  + D+ F+    +  ++ YDK +
Sbjct: 354 FPNSGHLILSAGMDTKVKIWDVFNTGKCMRTYMGHSKAVRDICFTNDGTKFLSAGYDKNI 533

Query: 80  RVWDVD 85
           + WD +
Sbjct: 534 KYWDTE 551



 Score = 28.5 bits (62), Expect = 0.47
 Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
 Frame = +3

Query: 21  FSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSPSMPR---LATSSYDK 77
           F++DG    S G+DK +  W T++ +  +T     +    V+ +P   +   L     DK
Sbjct: 483 FTNDGTKFLSAGYDKNIKYWDTETGQVISTFSTGKIPYV-VKLNPDEDKQNVLLAGMSDK 659

Query: 78  TVRVWDVD 85
            +  WD++
Sbjct: 660 KIVQWDMN 683


>TC84162 similar to GP|15810485|gb|AAL07130.1 putative WD40-repeat protein
          {Arabidopsis thaliana}, partial (29%)
          Length = 628

 Score = 40.4 bits (93), Expect = 1e-04
 Identities = 20/62 (32%), Positives = 30/62 (48%)
 Frame = +1

Query: 27 LLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSPSMPRLATSSYDKTVRVWDVDN 86
          L+ SG  D+   +W    L      + H   I  V FSP    + T+S DKT+R+W + +
Sbjct: 28 LVCSGSQDRTACVWRLPDLVSVVVFKGHKRGIWSVEFSPVDQCVVTASGDKTIRIWAISD 207

Query: 87 VS 88
           S
Sbjct: 208GS 213



 Score = 32.3 bits (72), Expect = 0.033
 Identities = 21/77 (27%), Positives = 32/77 (41%)
 Frame = +1

Query: 6   LNSVRASTNKVVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSP 65
           L +    T+ V+ + F + G  + S G D  V LW   S +  AT + H   +  +    
Sbjct: 217 LKTFEGHTSSVLRALFVTRGTQIVSCGADGLVKLWTVKSNECVATYDNHEDKVWALAVGR 396

Query: 66  SMPRLATSSYDKTVRVW 82
               LAT   D  V +W
Sbjct: 397 KTETLATGGSDAVVNLW 447


>TC77248 similar to GP|13489182|gb|AAK27816.1 putative WD-repeat containing
           protein {Oryza sativa}, partial (92%)
          Length = 2005

 Score = 40.4 bits (93), Expect = 1e-04
 Identities = 25/84 (29%), Positives = 42/84 (49%), Gaps = 3/84 (3%)
 Frame = +1

Query: 2   TFSELNSV---RASTNKVVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLI 58
           T+++++S    + S   ++         L+A+G  D   V++   S +  ATL  HS  +
Sbjct: 718 TYTQISSHPLNKTSKQGIIALDILHSKDLIATGNIDTNAVIFDRPSGQVLATLTGHSKKV 897

Query: 59  TDVRFSPSMPRLATSSYDKTVRVW 82
           T V+F      + T S DKTVR+W
Sbjct: 898 TSVKFVGQGESIITGSADKTVRLW 969


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.315    0.128    0.369 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,722,444
Number of Sequences: 36976
Number of extensions: 29246
Number of successful extensions: 328
Number of sequences better than 10.0: 128
Number of HSP's better than 10.0 without gapping: 258
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 317
length of query: 88
length of database: 9,014,727
effective HSP length: 64
effective length of query: 24
effective length of database: 6,648,263
effective search space: 159558312
effective search space used: 159558312
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 51 (24.3 bits)