Medicago
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146721.7 - phase: 0 
         (188 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC80554 similar to GP|13430400|gb|AAK25822.1 bZip transcription ...   222  8e-59
TC81433 similar to GP|13430400|gb|AAK25822.1 bZip transcription ...   166  6e-42
TC77200 similar to GP|22597162|gb|AAN03468.1 bZIP transcription ...    80  5e-16
TC77220 similar to GP|22597162|gb|AAN03468.1 bZIP transcription ...    79  1e-15
TC92502 weakly similar to GP|22597162|gb|AAN03468.1 bZIP transcr...    79  1e-15
TC78431 similar to GP|16797791|gb|AAL27150.1 bZIP transcription ...    70  5e-13
TC85773 weakly similar to GP|9650828|emb|CAC00658.1 common plant...    69  1e-12
TC86844 similar to GP|16797791|gb|AAL27150.1 bZIP transcription ...    69  1e-12
TC85772 weakly similar to GP|9650828|emb|CAC00658.1 common plant...    69  1e-12
TC87979 weakly similar to GP|10954097|gb|AAG25728.1 bZIP protein...    65  2e-11
AW981132 similar to GP|4457221|gb|A putative bZIP DNA-binding pr...    65  2e-11
CB893389 similar to PIR|T48034|T480 bZIP transcription factor-li...    62  1e-10
TC85206 similar to GP|16580134|gb|AAK92215.1 bZIP transcription ...    61  3e-10
TC91337 weakly similar to GP|13365772|dbj|BAB39174. RISBZ4 {Oryz...    59  9e-10
TC87794 similar to GP|13775107|gb|AAK39130.1 bZIP transcription ...    57  4e-09
TC78777 similar to PIR|T10985|T10985 regulator protein ROM2 - ki...    57  4e-09
TC83004 similar to PIR|T10985|T10985 regulator protein ROM2 - ki...    55  2e-08
TC88990 similar to PIR|T11751|T11751 transcription repressor ROM...    55  2e-08
BE941734 similar to GP|7406677|emb| putative ripening-related bZ...    55  2e-08
TC82668 weakly similar to GP|13346157|gb|AAK19602.1 bZIP protein...    47  4e-06

>TC80554 similar to GP|13430400|gb|AAK25822.1 bZip transcription factor
           {Phaseolus vulgaris}, partial (52%)
          Length = 839

 Score =  222 bits (565), Expect = 8e-59
 Identities = 127/195 (65%), Positives = 146/195 (74%), Gaps = 7/195 (3%)
 Frame = +1

Query: 1   MLP-SNTSPYLQNYNNMIQNNNISSYQLQKFSNQIYGNYLNTPHQQFPDFNYSPQSSCIS 59
           +LP S+ SPY     NMIQN  I + Q  K SNQ YG +   P Q   DF  SP SSCIS
Sbjct: 85  LLPYSDPSPYPPCNYNMIQNT-IQTPQHPKLSNQFYG-FNQNPIQILQDF--SPPSSCIS 252

Query: 60  SNSTSDEADEQNLSLINERKHRRMISNRESARRSRMRKQKHLDELWSQVLWLRNENHQLI 119
           SNSTSDEADEQNL LINERKHRRM+SNRESARRSRMRKQK LDELWSQV+WLRNENHQL+
Sbjct: 253 SNSTSDEADEQNLGLINERKHRRMVSNRESARRSRMRKQKQLDELWSQVVWLRNENHQLL 432

Query: 120 EKLNHVSENHDQVVQENAQLKEEALELRQMIKDMQIHSPLIPSFSPLDDT------YLRD 173
           +KLN+  E HD+VVQEN QLKE+A ELRQM+ DMQ+HS  +P  SPL+D        ++ 
Sbjct: 433 DKLNNFCETHDKVVQENVQLKEQASELRQMVCDMQLHSSCLP-LSPLEDVPSITSPNVKS 609

Query: 174 DSSNNSISSSMDLLG 188
           DSSN  I+SS+DLLG
Sbjct: 610 DSSN**ITSSVDLLG 654


>TC81433 similar to GP|13430400|gb|AAK25822.1 bZip transcription factor
           {Phaseolus vulgaris}, partial (68%)
          Length = 774

 Score =  166 bits (419), Expect = 6e-42
 Identities = 93/170 (54%), Positives = 115/170 (66%), Gaps = 7/170 (4%)
 Frame = +2

Query: 14  NNMIQNNNISSYQLQKFSNQIYG-NYLNTPHQQFPDFNYSPQSSCISSNST-SDEADEQN 71
           N ++  N I +Y L      +   +Y +  H QF         SC+SSNST SDEADE  
Sbjct: 95  NFVLPQNEIPNYHLSNILGTLPNFHYPSAGHDQFAP------PSCLSSNSTTSDEADELQ 256

Query: 72  LSLINERKHRRMISNRESARRSRMRKQKHLDELWSQVLWLRNENHQLIEKLNHVSENHDQ 131
            ++I+ERKHRRMISNRESARRSRMRKQKHLDELWSQV+ LR ENH L++KLNHVSE+HD 
Sbjct: 257 FNIIDERKHRRMISNRESARRSRMRKQKHLDELWSQVMKLRTENHNLVDKLNHVSESHDT 436

Query: 132 VVQENAQLKEEALELRQMIKDMQIHSPLIPSFS-----PLDDTYLRDDSS 176
           VVQENA+LKEE  +LRQM+ DMQI +    +       P + +  +DDSS
Sbjct: 437 VVQENARLKEETFDLRQMVADMQIGNSFPCNMEDLCEIPCNTSQHKDDSS 586


>TC77200 similar to GP|22597162|gb|AAN03468.1 bZIP transcription factor ATB2
           {Glycine max}, partial (84%)
          Length = 1481

 Score = 80.1 bits (196), Expect = 5e-16
 Identities = 46/98 (46%), Positives = 67/98 (67%)
 Frame = +1

Query: 56  SCISSNSTSDEADEQNLSLINERKHRRMISNRESARRSRMRKQKHLDELWSQVLWLRNEN 115
           S +  NS S+E D Q  +L+++RK +RMISNRESARRSRMRKQKHLD+L SQV  LR EN
Sbjct: 562 SSLLQNSGSEE-DLQ--ALMDQRKRKRMISNRESARRSRMRKQKHLDDLVSQVSKLRKEN 732

Query: 116 HQLIEKLNHVSENHDQVVQENAQLKEEALELRQMIKDM 153
            +++  +N  ++ +  V  EN+ L+ +  EL   ++ +
Sbjct: 733 QEILTSVNITTQKYLSVEAENSVLRAQMGELSNRLESL 846


>TC77220 similar to GP|22597162|gb|AAN03468.1 bZIP transcription factor ATB2
           {Glycine max}, partial (65%)
          Length = 1341

 Score = 79.0 bits (193), Expect = 1e-15
 Identities = 40/87 (45%), Positives = 59/87 (66%)
 Frame = +3

Query: 67  ADEQNLSLINERKHRRMISNRESARRSRMRKQKHLDELWSQVLWLRNENHQLIEKLNHVS 126
           ++E  + L+++RK +RMISNRESARRSRMRKQKHLD+L  Q+  LRNEN Q++  +N  +
Sbjct: 615 SEEDLMLLMDQRKRKRMISNRESARRSRMRKQKHLDDLAVQLSQLRNENQQILTSVNLTT 794

Query: 127 ENHDQVVQENAQLKEEALELRQMIKDM 153
           +    V  EN+ L+ +  EL    + +
Sbjct: 795 QRFLAVESENSVLRAQLNELNSRFESL 875


>TC92502 weakly similar to GP|22597162|gb|AAN03468.1 bZIP transcription
           factor ATB2 {Glycine max}, partial (59%)
          Length = 597

 Score = 78.6 bits (192), Expect = 1e-15
 Identities = 38/96 (39%), Positives = 66/96 (68%)
 Frame = +3

Query: 58  ISSNSTSDEADEQNLSLINERKHRRMISNRESARRSRMRKQKHLDELWSQVLWLRNENHQ 117
           +S+ S S  ++E    L+++RK +R  S RESARRSRMRKQKH+D+L ++V  LRNEN +
Sbjct: 12  VSTESQSYGSEEDLQRLMDQRKRKRKQSGRESARRSRMRKQKHMDDLIAEVERLRNENSE 191

Query: 118 LIEKLNHVSENHDQVVQENAQLKEEALELRQMIKDM 153
           ++ ++N  ++++ ++  EN  L+ +  EL Q ++ +
Sbjct: 192 ILTRMNMTTQHYLKIEAENCVLRAQMCELNQRLQSL 299


>TC78431 similar to GP|16797791|gb|AAL27150.1 bZIP transcription factor
           {Nicotiana tabacum}, partial (61%)
          Length = 1546

 Score = 70.1 bits (170), Expect = 5e-13
 Identities = 43/120 (35%), Positives = 64/120 (52%), Gaps = 6/120 (5%)
 Frame = +1

Query: 53  PQSSCISSNSTSDEADEQNLSLINE------RKHRRMISNRESARRSRMRKQKHLDELWS 106
           P +S  S   + D+  E    +I+       ++ RRM+SNRESARRSR RKQ HL EL +
Sbjct: 658 PSTSGSSREQSDDDEAEGETYMIDSTDPTDVKRVRRMLSNRESARRSRRRKQAHLTELET 837

Query: 107 QVLWLRNENHQLIEKLNHVSENHDQVVQENAQLKEEALELRQMIKDMQIHSPLIPSFSPL 166
           QV  LR EN  L+++L  V++ +     +N  LK +   LR  +K  +     +   +PL
Sbjct: 838 QVSQLRGENSTLVKRLTDVNQKYTDSAVDNRVLKADVETLRAKVKMAEETVKRVTGLNPL 1017


>TC85773 weakly similar to GP|9650828|emb|CAC00658.1 common plant regulatory
           factor 7 {Petroselinum crispum}, partial (62%)
          Length = 945

 Score = 68.6 bits (166), Expect = 1e-12
 Identities = 33/103 (32%), Positives = 65/103 (63%)
 Frame = +1

Query: 51  YSPQSSCISSNSTSDEADEQNLSLINERKHRRMISNRESARRSRMRKQKHLDELWSQVLW 110
           YS  +S + ++ +  + +   +++ +++K +RM SNRESARRSRM+KQ+H+++L +Q+  
Sbjct: 187 YSSGTSSLQNSGSEGDHNHVQVNITDQKKRKRMQSNRESARRSRMKKQQHMEDLSNQIEQ 366

Query: 111 LRNENHQLIEKLNHVSENHDQVVQENAQLKEEALELRQMIKDM 153
           L+ EN Q+   +   ++ +  V  ENA L+ +  EL   ++ +
Sbjct: 367 LKKENIQISTNVGVTTQMYLNVESENAILRVQMAELSHRLQSL 495


>TC86844 similar to GP|16797791|gb|AAL27150.1 bZIP transcription factor
           {Nicotiana tabacum}, partial (47%)
          Length = 1609

 Score = 68.6 bits (166), Expect = 1e-12
 Identities = 39/98 (39%), Positives = 59/98 (59%), Gaps = 5/98 (5%)
 Frame = +1

Query: 59  SSNSTSDEADEQNLSLINE-----RKHRRMISNRESARRSRMRKQKHLDELWSQVLWLRN 113
           +S S+ DE  +  +++  +     ++ RRM+SNRESARRSR RKQ HL EL +QV  LR 
Sbjct: 601 TSGSSDDEEGDGEINMNGDNPTDAKRVRRMLSNRESARRSRRRKQAHLTELETQVSELRG 780

Query: 114 ENHQLIEKLNHVSENHDQVVQENAQLKEEALELRQMIK 151
           EN  L+++L  V++  +    +N  LK +   LR  +K
Sbjct: 781 ENSSLLKRLTDVTQKFNNSAVDNRILKADVETLRAKVK 894


>TC85772 weakly similar to GP|9650828|emb|CAC00658.1 common plant regulatory
           factor 7 {Petroselinum crispum}, partial (64%)
          Length = 1224

 Score = 68.6 bits (166), Expect = 1e-12
 Identities = 33/103 (32%), Positives = 65/103 (63%)
 Frame = +1

Query: 51  YSPQSSCISSNSTSDEADEQNLSLINERKHRRMISNRESARRSRMRKQKHLDELWSQVLW 110
           YS  +S + ++ +  + +   +++ +++K +RM SNRESARRSRM+KQ+H+++L +Q+  
Sbjct: 676 YSSGTSSLQNSGSEGDHNHVQVNITDQKKRKRMQSNRESARRSRMKKQQHMEDLSNQIEQ 855

Query: 111 LRNENHQLIEKLNHVSENHDQVVQENAQLKEEALELRQMIKDM 153
           L+ EN Q+   +   ++ +  V  ENA L+ +  EL   ++ +
Sbjct: 856 LKKENIQISTNVGVTTQMYLNVESENAILRVQMAELSHRLQSL 984


>TC87979 weakly similar to GP|10954097|gb|AAG25728.1 bZIP protein BZO2H2
           {Arabidopsis thaliana}, partial (49%)
          Length = 1346

 Score = 65.1 bits (157), Expect = 2e-11
 Identities = 43/113 (38%), Positives = 61/113 (53%), Gaps = 7/113 (6%)
 Frame = +2

Query: 59  SSNSTSDEADE-----QNLSLINERKHRRMISNRESARRSRMRKQKHLDELWSQVLWLRN 113
           SS   SDE DE     Q+ + ++ ++ RR +SNRESARRSR RKQ HL +L  QV  LR 
Sbjct: 494 SSRDPSDEDDEAGPCEQSTNPVDMKRLRRKVSNRESARRSRRRKQAHLADLEVQVEQLRL 673

Query: 114 ENHQLIEKLNHVSENHDQVVQENAQLKEEALELRQMIK--DMQIHSPLIPSFS 164
           EN  L ++L   S+        N  LK +   LR  +K  +  +    +P+F+
Sbjct: 674 ENASLFKQLTDASQQFRDANTNNRVLKSDVEALRAKVKLAEDMVSRGTLPTFN 832


>AW981132 similar to GP|4457221|gb|A putative bZIP DNA-binding protein
           {Capsicum chinense}, partial (47%)
          Length = 587

 Score = 64.7 bits (156), Expect = 2e-11
 Identities = 31/88 (35%), Positives = 56/88 (63%)
 Frame = +2

Query: 66  EADEQNLSLINERKHRRMISNRESARRSRMRKQKHLDELWSQVLWLRNENHQLIEKLNHV 125
           E+      L+++RK++R  SNRESA+R RMRK KH+D++ SQ+  L  +N +++  +N  
Sbjct: 233 ESSGPEKELMDQRKNKRKQSNRESAKRCRMRKHKHVDDMMSQMSQLTKDNSEILNSINIT 412

Query: 126 SENHDQVVQENAQLKEEALELRQMIKDM 153
           ++++  V  EN+ L+ +  EL Q  + +
Sbjct: 413 TQHYLNVEAENSILRAQIGELSQRFQSL 496


>CB893389 similar to PIR|T48034|T480 bZIP transcription factor-like protein -
           Arabidopsis thaliana, partial (35%)
          Length = 724

 Score = 62.4 bits (150), Expect = 1e-10
 Identities = 38/89 (42%), Positives = 51/89 (56%)
 Frame = +1

Query: 63  TSDEADEQNLSLINERKHRRMISNRESARRSRMRKQKHLDELWSQVLWLRNENHQLIEKL 122
           TS  +D  N   ++ERK +RMISNRESARRSR RKQK L++   +   LRNEN +L E +
Sbjct: 166 TSSGSDGVN-GAMDERKRKRMISNRESARRSRERKQKLLEDYQDEANRLRNENRRLSENI 342

Query: 123 NHVSENHDQVVQENAQLKEEALELRQMIK 151
               E  +     N  L+ +  EL   +K
Sbjct: 343 RVREEGFNANEAANGVLRAQTQELTDQLK 429


>TC85206 similar to GP|16580134|gb|AAK92215.1 bZIP transcription factor
           BZI-4 {Nicotiana tabacum}, partial (31%)
          Length = 1139

 Score = 60.8 bits (146), Expect = 3e-10
 Identities = 37/99 (37%), Positives = 58/99 (58%)
 Frame = +2

Query: 53  PQSSCISSNSTSDEADEQNLSLINERKHRRMISNRESARRSRMRKQKHLDELWSQVLWLR 112
           P SSC S++  SD  D Q    I+ERK +RM+SNRESARRSR+RKQ+ +++L  +   L+
Sbjct: 482 PVSSC-SASGGSDGMDLQ----IDERKRKRMLSNRESARRSRLRKQQQVEDLTGEAGKLK 646

Query: 113 NENHQLIEKLNHVSENHDQVVQENAQLKEEALELRQMIK 151
            EN +L   +    E + ++   N  ++ +  EL    +
Sbjct: 647 IENDRLARSIKATEEAYLKMEAANDVIRAQTRELEAQFR 763


>TC91337 weakly similar to GP|13365772|dbj|BAB39174. RISBZ4 {Oryza sativa},
           partial (38%)
          Length = 1112

 Score = 59.3 bits (142), Expect = 9e-10
 Identities = 42/117 (35%), Positives = 60/117 (50%), Gaps = 11/117 (9%)
 Frame = +1

Query: 59  SSNSTSDEADEQNLS--------LINERKHRRMISNRESARRSRMRKQKHLDELWSQVLW 110
           +++ +SD +DE N S         ++ ++ RR  SN ESARRSR RKQ HL EL +QV  
Sbjct: 337 TASGSSDPSDEDNESGPCEQITNPVDMKRQRRKDSNCESARRSRWRKQAHLSELEAQVEK 516

Query: 111 LRNENHQLIEKLNHVSENHDQVVQENAQLKEEALELRQMIK---DMQIHSPLIPSFS 164
           L+ EN  L ++    S+   +    N  LK +   LR  +K   DM   S L  S +
Sbjct: 517 LKLENATLYKQFTDTSQQFHEADTNNRVLKSDVEALRAKVKLAEDMVTRSSLTTSLN 687


>TC87794 similar to GP|13775107|gb|AAK39130.1 bZIP transcription factor 2
           {Phaseolus vulgaris}, partial (50%)
          Length = 1264

 Score = 57.0 bits (136), Expect = 4e-09
 Identities = 30/69 (43%), Positives = 42/69 (60%)
 Frame = +2

Query: 78  RKHRRMISNRESARRSRMRKQKHLDELWSQVLWLRNENHQLIEKLNHVSENHDQVVQENA 137
           ++ RR  SNRESARRSR+RKQ   DEL  +   L  EN  L  +L+ +   ++++  ENA
Sbjct: 389 KRQRRKQSNRESARRSRLRKQAECDELAQRAEVLNQENASLRAELSPIKSEYEKIPSENA 568

Query: 138 QLKEEALEL 146
            LKE   E+
Sbjct: 569 SLKERLGEI 595


>TC78777 similar to PIR|T10985|T10985 regulator protein ROM2 - kidney bean,
            partial (84%)
          Length = 1822

 Score = 57.0 bits (136), Expect = 4e-09
 Identities = 30/65 (46%), Positives = 44/65 (67%)
 Frame = +1

Query: 78   RKHRRMISNRESARRSRMRKQKHLDELWSQVLWLRNENHQLIEKLNHVSENHDQVVQENA 137
            ++ RR  SNRESARRSR+RKQ   +EL  +V  L  E+  L  ++N ++EN +++  ENA
Sbjct: 997  KRERRKQSNRESARRSRLRKQAEAEELARKVESLNAESASLRSEINRLAENSERLRMENA 1176

Query: 138  QLKEE 142
             LKE+
Sbjct: 1177 ALKEK 1191


>TC83004 similar to PIR|T10985|T10985 regulator protein ROM2 - kidney bean,
           partial (78%)
          Length = 1250

 Score = 55.1 bits (131), Expect = 2e-08
 Identities = 31/65 (47%), Positives = 43/65 (65%)
 Frame = +1

Query: 78  RKHRRMISNRESARRSRMRKQKHLDELWSQVLWLRNENHQLIEKLNHVSENHDQVVQENA 137
           ++ RR  SNRESARRSR+RKQ   +EL  +V  L  EN  L  ++N ++EN  ++  ENA
Sbjct: 778 KRERRKQSNRESARRSRLRKQAEAEELARRVDALTAENLALKSEMNELAENSAKLKIENA 957

Query: 138 QLKEE 142
            LKE+
Sbjct: 958 TLKEK 972


>TC88990 similar to PIR|T11751|T11751 transcription repressor ROM1 - kidney
            bean, partial (91%)
          Length = 1528

 Score = 54.7 bits (130), Expect = 2e-08
 Identities = 28/65 (43%), Positives = 42/65 (64%)
 Frame = +1

Query: 78   RKHRRMISNRESARRSRMRKQKHLDELWSQVLWLRNENHQLIEKLNHVSENHDQVVQENA 137
            ++ +R  SNRESAR+SR+RKQ   +EL  +V  L  EN  L E+L  +SE  +++  EN 
Sbjct: 991  KRQKRKQSNRESARKSRLRKQAECEELLKRVEALGGENRTLREELQKLSEECEKLTSEND 1170

Query: 138  QLKEE 142
             +KE+
Sbjct: 1171 SIKED 1185


>BE941734 similar to GP|7406677|emb| putative ripening-related bZIP protein
           {Vitis vinifera}, partial (18%)
          Length = 607

 Score = 54.7 bits (130), Expect = 2e-08
 Identities = 30/66 (45%), Positives = 40/66 (60%)
 Frame = +2

Query: 77  ERKHRRMISNRESARRSRMRKQKHLDELWSQVLWLRNENHQLIEKLNHVSENHDQVVQEN 136
           ER+ RRMI NRESA RSR RKQ +  EL ++V  L+ EN +L +K   + E     V+E 
Sbjct: 8   ERRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKEENEELQKKQEEIMELQKNQVKEM 187

Query: 137 AQLKEE 142
             L+ E
Sbjct: 188 MNLQRE 205


>TC82668 weakly similar to GP|13346157|gb|AAK19602.1 bZIP protein DPBF4
           {Arabidopsis thaliana}, partial (32%)
          Length = 973

 Score = 47.0 bits (110), Expect = 4e-06
 Identities = 32/80 (40%), Positives = 44/80 (55%), Gaps = 11/80 (13%)
 Frame = +1

Query: 50  NYSPQSSCISSNSTS-----------DEADEQNLSLINERKHRRMISNRESARRSRMRKQ 98
           ++ P +S +SS+S S           D  D    +L  ER+ RR I NRESA RSR RKQ
Sbjct: 178 SFQPNTSLVSSSSISSLSDAKPGRKRDAPDAYEKAL--ERRLRRKIKNRESAARSRARKQ 351

Query: 99  KHLDELWSQVLWLRNENHQL 118
            + +EL ++V  L  +N QL
Sbjct: 352 AYHNELVTKVTLLEQQNMQL 411


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.311    0.126    0.352 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,248,786
Number of Sequences: 36976
Number of extensions: 88300
Number of successful extensions: 617
Number of sequences better than 10.0: 85
Number of HSP's better than 10.0 without gapping: 608
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 614
length of query: 188
length of database: 9,014,727
effective HSP length: 91
effective length of query: 97
effective length of database: 5,649,911
effective search space: 548041367
effective search space used: 548041367
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 55 (25.8 bits)


Medicago: description of AC146721.7