BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146711.8 + phase: 0
(207 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC89987 weakly similar to PIR|D86443|D86443 probable PPR-repeat ... 148 2e-36
BG455368 weakly similar to GP|9759524|dbj selenium-binding prote... 134 3e-32
AL370459 weakly similar to GP|20146256|d hypothetical protein {O... 110 3e-25
CA921534 similar to PIR|D96516|D96 F16N3.14 [imported] - Arabido... 92 2e-19
TC80535 weakly similar to GP|14335136|gb|AAK59848.1 At2g15690/F9... 91 3e-19
TC83158 weakly similar to PIR|H86191|H86191 hypothetical protein... 89 2e-18
BF635667 weakly similar to PIR|C85359|C853 hypothetical protein ... 83 7e-17
AW776322 weakly similar to PIR|H84859|H84 hypothetical protein A... 82 1e-16
BG646586 weakly similar to GP|10177683|dbj selenium-binding prot... 79 2e-15
BQ122819 similar to PIR|C84748|C84 hypothetical protein At2g3368... 77 5e-15
BI308000 similar to GP|7363286|dbj| Similar to Arabidopsis thali... 74 3e-14
BF633384 similar to PIR|T46179|T46 hypothetical protein T8H10.30... 70 4e-13
TC83482 weakly similar to GP|9758453|dbj|BAB08982.1 selenium-bin... 67 6e-12
BE202782 weakly similar to GP|22093801|dbj hypothetical protein~... 62 2e-10
TC83657 weakly similar to GP|11994382|dbj|BAB02341. gb|AAB82628.... 59 1e-09
BE941714 weakly similar to GP|11994734|dbj selenium-binding prot... 59 2e-09
AW127386 43 7e-05
AW687696 weakly similar to PIR|T49965|T499 hypothetical protein ... 42 2e-04
BG645006 similar to GP|17064738|gb Unknown protein {Arabidopsis ... 38 0.003
BG584228 weakly similar to PIR|F71411|F71 hypothetical protein -... 33 0.10
>TC89987 weakly similar to PIR|D86443|D86443 probable PPR-repeat protein
[imported] - Arabidopsis thaliana, partial (62%)
Length = 1559
Score = 148 bits (373), Expect = 2e-36
Identities = 77/204 (37%), Positives = 130/204 (62%), Gaps = 1/204 (0%)
Frame = +2
Query: 1 MIDLLGRAKRFEEATMLIEEGK-NPDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQAPRD 59
M+DLLGR +EA LI+ P+ + WR+LL+ACK+H +E+ + + + +
Sbjct: 839 MVDLLGRFGMLKEAYELIKSMSIKPNDVIWRSLLSACKVHHNLEIGKIAAENLFMLNQNN 1018
Query: 60 GGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKKTPAMSWVDIDREVHTFMAGDLSHPRA 119
G +++L N+YA A KWD+V ++++ + L +TP S ++ R+V+ F++ D S P+
Sbjct: 1019 SGDYLVLANMYAKAQKWDDVAKIRTKLAERNLVQTPGFSLIEAKRKVYKFVSQDKSIPQW 1198
Query: 120 HEISEMLHELIEKVITLGYNPDTKFVLQDLEEEKKISALYYHSEKLAIAFALWKTCGKNT 179
+ I EM+H++ +V GY PDT VL D+++E+K L +HS+KLAIAF L T +
Sbjct: 1199 NIIYEMIHQMEWQVKFEGYIPDTSQVLLDVDDEEKKERLKFHSQKLAIAFGLIHT-SEGX 1375
Query: 180 AIRIFKNLRVCGDCHSWIKFVSLL 203
+RI +NLR+C DCH++ K++S++
Sbjct: 1376 PLRITRNLRMCSDCHTYTKYISMI 1447
>BG455368 weakly similar to GP|9759524|dbj selenium-binding protein-like
{Arabidopsis thaliana}, partial (33%)
Length = 687
Score = 134 bits (336), Expect = 3e-32
Identities = 74/196 (37%), Positives = 112/196 (56%), Gaps = 2/196 (1%)
Frame = +1
Query: 12 EEATMLIEE-GKNPDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQAPRDGGTHILLTNIY 70
E+A L++ P+ W LL A IHG ++AE + + + P + G ++LL+ Y
Sbjct: 10 EKALQLVQTMPMEPNGGVWGALLGASHIHGNPDVAEIASRSLFELEPDNLGNYLLLSKTY 189
Query: 71 ASAGKWDNVIEMKSAGRDLRLKKTPAMSWVDIDREV-HTFMAGDLSHPRAHEISEMLHEL 129
A A KWD+V ++ R+ +L+K P SWV+ + H F AGD+ HP +EI + L +L
Sbjct: 190 ALAAKWDDVSRVRKLMREKQLRKNPGCSWVEAKNGIIHEFFAGDVKHPEINEIKKALDDL 369
Query: 130 IEKVITLGYNPDTKFVLQDLEEEKKISALYYHSEKLAIAFALWKTCGKNTAIRIFKNLRV 189
++++ GY P V D+++E K L HSEKLA+A+ L T +T I+I KNLR+
Sbjct: 370 LQRLKCTGYQPKLNSVPYDIDDEGKRCLLVSHSEKLALAYGLLSTDAGST-IKIMKNLRI 546
Query: 190 CGDCHSWIKFVSLLTG 205
C DCH + S LTG
Sbjct: 547 CEDCHIVMCGASXLTG 594
>AL370459 weakly similar to GP|20146256|d hypothetical protein {Oryza sativa
(japonica cultivar-group)}, partial (11%)
Length = 477
Score = 110 bits (276), Expect = 3e-25
Identities = 54/103 (52%), Positives = 73/103 (70%)
Frame = +1
Query: 103 DREVHTFMAGDLSHPRAHEISEMLHELIEKVITLGYNPDTKFVLQDLEEEKKISALYYHS 162
+ +VH F GD HP+A +I E L EL K+ +GY P+T FVL D+E+E+K L+ HS
Sbjct: 1 ENQVHKFHVGDTLHPKAQQIYEKLDELALKIKNVGYVPNTDFVLHDVEDEQKEQYLFQHS 180
Query: 163 EKLAIAFALWKTCGKNTAIRIFKNLRVCGDCHSWIKFVSLLTG 205
EKLA+AFAL T IR+FKNLRVCGDCH+ IK++S+++G
Sbjct: 181 EKLAVAFALISTPNPK-PIRVFKNLRVCGDCHTAIKYISMVSG 306
>CA921534 similar to PIR|D96516|D96 F16N3.14 [imported] - Arabidopsis
thaliana, partial (18%)
Length = 790
Score = 91.7 bits (226), Expect = 2e-19
Identities = 63/182 (34%), Positives = 90/182 (48%)
Frame = -1
Query: 24 PDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQAPRDGGTHILLTNIYASAGKWDNVIEMK 83
P V W TL N +IHG++E R+ LLT + S K
Sbjct: 697 PGVELWETLRNFARIHGDLE--------------REDCADELLTVLDPS----------K 590
Query: 84 SAGRDLRLKKTPAMSWVDIDREVHTFMAGDLSHPRAHEISEMLHELIEKVITLGYNPDTK 143
+A + L + S +++ E + + P E L L ++ GY PDT+
Sbjct: 589 AAADKVPLPQRKKQSAINMLEEKNRVSEYRCNMPYKEEGDVKLRGLTGQMREAGYVPDTR 410
Query: 144 FVLQDLEEEKKISALYYHSEKLAIAFALWKTCGKNTAIRIFKNLRVCGDCHSWIKFVSLL 203
+VL D++EE+K AL YHSE+LAIA+ L T T +RI KNLR+CGDCH+ IK +S +
Sbjct: 409 YVLHDIDEEEKEKALQYHSERLAIAYGLIST-PPRTTLRIIKNLRICGDCHNAIKIMSKI 233
Query: 204 TG 205
G
Sbjct: 232 VG 227
>TC80535 weakly similar to GP|14335136|gb|AAK59848.1 At2g15690/F9O13.24
{Arabidopsis thaliana}, partial (55%)
Length = 1727
Score = 90.9 bits (224), Expect = 3e-19
Identities = 65/206 (31%), Positives = 103/206 (49%), Gaps = 1/206 (0%)
Frame = +2
Query: 1 MIDLLGRAKRFEEATMLIEEGK-NPDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQAPRD 59
++D+LG++ +EA IE+ P V + TL N +IHG+V++ + + ++ P
Sbjct: 710 LLDVLGQSGYLKEAEEFIEQLPFEPTVTVFETLKNYARIHGDVDLEDHVEELIVSLDPSK 889
Query: 60 GGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKKTPAMSWVDIDREVHTFMAGDLSHPRA 119
+ + T KK A+S +D + + +P
Sbjct: 890 AVANKIPTP---------------------PPKKYTAISMLDGKNRIIEY-----KNPTL 991
Query: 120 HEISEMLHELIEKVITLGYNPDTKFVLQDLEEEKKISALYYHSEKLAIAFALWKTCGKNT 179
++ E L + + GY PDT++VL D+++E K AL YHSE+LAIA+ L T T
Sbjct: 992 YKDDEKLIAM-NSMKDAGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLIST-PPRT 1165
Query: 180 AIRIFKNLRVCGDCHSWIKFVSLLTG 205
+RI KNLRVCGDCH+ IK +S + G
Sbjct: 1166PLRIIKNLRVCGDCHNAIKIMSRIVG 1243
>TC83158 weakly similar to PIR|H86191|H86191 hypothetical protein [imported]
- Arabidopsis thaliana, partial (42%)
Length = 1194
Score = 88.6 bits (218), Expect = 2e-18
Identities = 50/152 (32%), Positives = 84/152 (54%), Gaps = 1/152 (0%)
Frame = +2
Query: 1 MIDLLGRAKRFEEATMLIEE-GKNPDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQAPRD 59
++DL RA R +EA +I++ P+ + +LL AC+ G+VE+AEK MK ++ P
Sbjct: 587 LVDLYSRAGRLKEAWDVIKKMPMMPNEVVLGSLLAACRTQGDVELAEKVMKYQVELYPGG 766
Query: 60 GGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKKTPAMSWVDIDREVHTFMAGDLSHPRA 119
++L +NIYA+ GKWD +++ ++ L+K A S ++ID +H F++GD H
Sbjct: 767 DSNYVLFSNIYAAVGKWDGASKVRREMKERGLQKNLAFSSIEIDSGIHKFVSGDKYHEEN 946
Query: 120 HEISEMLHELIEKVITLGYNPDTKFVLQDLEE 151
I L L ++ GY PD D+++
Sbjct: 947 DYIYSALELLSFELHLYGYVPDFSGKESDVDD 1042
>BF635667 weakly similar to PIR|C85359|C853 hypothetical protein AT4g30700
[imported] - Arabidopsis thaliana, partial (6%)
Length = 603
Score = 83.2 bits (204), Expect = 7e-17
Identities = 46/137 (33%), Positives = 67/137 (48%), Gaps = 2/137 (1%)
Frame = +3
Query: 1 MIDLLGRAKRFEEATMLIEEGKNPDVI--QWRTLLNACKIHGEVEMAEKFMKKMLDQAPR 58
M+DL R R EEA L+E K+ V W LL C +H V++ E + P
Sbjct: 114 MVDLFSRCGRLEEALQLLERMKSSSVTGSMWGALLAGCVMHQNVKIGEVAAHHLFQLEPN 293
Query: 59 DGGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKKTPAMSWVDIDREVHTFMAGDLSHPR 118
+ ++ L IY S G V + RDL L KTP W++I H F GDLSHP
Sbjct: 294 NTSNYVALWGIYQSRGMVLGVSTIXGKMRDLGLVKTPGCXWINIAGRAHKFYQGDLSHPL 473
Query: 119 AHEISEMLHELIEKVIT 135
+H I + ++E+ +++
Sbjct: 474 SHIICKRVYEIXXTLLS 524
>AW776322 weakly similar to PIR|H84859|H84 hypothetical protein At2g42920
[imported] - Arabidopsis thaliana, partial (27%)
Length = 633
Score = 82.0 bits (201), Expect = 1e-16
Identities = 40/123 (32%), Positives = 75/123 (60%), Gaps = 1/123 (0%)
Frame = +1
Query: 1 MIDLLGRAKRFEEATMLIEEGK-NPDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQAPRD 59
++D+LG+A EEA LI+ PD I W +LL++C+ H V++A + +++ + P D
Sbjct: 256 IVDVLGQAGLLEEAEELIKGMPLKPDAIIWGSLLSSCRKHRNVQIARRAAQRVYELNPSD 435
Query: 60 GGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKKTPAMSWVDIDREVHTFMAGDLSHPRA 119
++L++N++A++ K++ IE + ++ +K P S +++ EVH F+AG HP+
Sbjct: 436 ASGYVLMSNVHAASNKFEEAIEQRLLMKENLTEKEPGCSSIELYGEVHEFIAGGRLHPKT 615
Query: 120 HEI 122
EI
Sbjct: 616 QEI 624
>BG646586 weakly similar to GP|10177683|dbj selenium-binding protein-like
{Arabidopsis thaliana}, partial (9%)
Length = 687
Score = 78.6 bits (192), Expect = 2e-15
Identities = 39/101 (38%), Positives = 58/101 (56%), Gaps = 1/101 (0%)
Frame = -3
Query: 1 MIDLLGRAKRFEEATMLIEEGK-NPDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQAPRD 59
M+DLLGRA + E+A LI+E + D W +LL AC+++G VE+ E + + + P D
Sbjct: 634 MVDLLGRAGQLEKAYSLIKENSTSADATTWGSLLAACRVYGNVELGEIAARHLFEIDPTD 455
Query: 60 GGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKKTPAMSWV 100
G ++LL N YAS KW+ E+K +KK SW+
Sbjct: 454 SGNYVLLANTYASNDKWERAEEVKKLMSKKGMKKPSGYSWI 332
>BQ122819 similar to PIR|C84748|C84 hypothetical protein At2g33680 [imported]
- Arabidopsis thaliana, partial (15%)
Length = 771
Score = 77.0 bits (188), Expect = 5e-15
Identities = 43/137 (31%), Positives = 69/137 (49%), Gaps = 1/137 (0%)
Frame = +2
Query: 5 LGRAKRFEEATMLIEEGK-NPDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQAPRDGGTH 63
L RA + EA IE + + WR LL ACK H E+ +K+++ + +
Sbjct: 20 LSRAGKLNEAKEFIESATVDHGLCLWRILLGACKNHRNYELGVYAGEKLVELGSPESSAY 199
Query: 64 ILLTNIYASAGKWDNVIEMKSAGRDLRLKKTPAMSWVDIDREVHTFMAGDLSHPRAHEIS 123
+LL++IY + G +NV ++ + + K P SW+++ VH F+ GD HP+ EI
Sbjct: 200 VLLSSIYTALGDRENVERVRRIMKARGVNKEPGCSWIELKGLVHVFVVGDNQHPQVDEIR 379
Query: 124 EMLHELIEKVITLGYNP 140
L L + +I GY P
Sbjct: 380 LELELLTKLMIDEGYQP 430
>BI308000 similar to GP|7363286|dbj| Similar to Arabidopsis thaliana DNA
chromosome 4 BAC clone F4I10; vegetative storage
protein., partial (12%)
Length = 771
Score = 74.3 bits (181), Expect = 3e-14
Identities = 42/87 (48%), Positives = 53/87 (60%)
Frame = +3
Query: 119 AHEISEMLHELIEKVITLGYNPDTKFVLQDLEEEKKISALYYHSEKLAIAFALWKTCGKN 178
+ EI L L +K+ GY PDT + D+EE+ K L HSE+LAIAF L T
Sbjct: 6 SEEIYAFLEALGDKIRDAGYIPDTNSI-HDVEEKVKEQLLSSHSERLAIAFGLLNT-NHG 179
Query: 179 TAIRIFKNLRVCGDCHSWIKFVSLLTG 205
T I + KNLRVCGDCH K++SL+TG
Sbjct: 180 TPIHVRKNLRVCGDCHDVTKYISLVTG 260
>BF633384 similar to PIR|T46179|T46 hypothetical protein T8H10.30 -
Arabidopsis thaliana, partial (22%)
Length = 595
Score = 70.5 bits (171), Expect = 4e-13
Identities = 39/117 (33%), Positives = 65/117 (55%), Gaps = 2/117 (1%)
Frame = +1
Query: 1 MIDLLGRAKRFEEATMLIEE--GKNPDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQAPR 58
++DLLGR+ + EEA LI+ V W +LL ACKIH +E+ E K + P
Sbjct: 244 LVDLLGRSGQIEEAYNLIKTMPSNMKKVDAWSSLLGACKIHQNLEIGEIAAKNLFVLDPN 423
Query: 59 DGGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKKTPAMSWVDIDREVHTFMAGDLS 115
++LL+NIY+SAG WD I+++ ++ ++K + +++ +F GD+S
Sbjct: 424 VASYYVLLSNIYSSAGLWDQAIDVRKKMKEKGVRKNLDVVGLNMAMRFTSFWQGDVS 594
>TC83482 weakly similar to GP|9758453|dbj|BAB08982.1 selenium-binding
protein-like {Arabidopsis thaliana}, partial (10%)
Length = 895
Score = 66.6 bits (161), Expect = 6e-12
Identities = 35/102 (34%), Positives = 57/102 (55%), Gaps = 1/102 (0%)
Frame = +2
Query: 1 MIDLLGRAKRFEEATMLIEEGK-NPDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQAPRD 59
M+DL GRA RF+EA LI+ PDV+ W LL AC +H +E+ E +++
Sbjct: 233 MVDLYGRAGRFDEAENLIKNMPFEPDVVLWGALLAACGLHSNLELGEYAAERIRRLESSH 412
Query: 60 GGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKKTPAMSWVD 101
++ +L+ I G W +V E++ ++ +KK A+SWV+
Sbjct: 413 PVSYSVLSKIQGEKGVWSSVNELRDTMKERGIKKQTAISWVE 538
Score = 26.6 bits (57), Expect = 7.2
Identities = 16/56 (28%), Positives = 28/56 (49%), Gaps = 2/56 (3%)
Frame = +2
Query: 24 PDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQ--APRDGGTHILLTNIYASAGKWD 77
PD + + +L+AC G VE EK ML + + + + ++Y AG++D
Sbjct: 101 PDEVTFVNVLSACVHAGLVEEGEKHFTDMLTKYGIQAEMEHYSCMVDLYGRAGRFD 268
>BE202782 weakly similar to GP|22093801|dbj hypothetical protein~predicted by
GlimmerM~similar to Arabidopsis thaliana chromosome3
At3g23330, partial (13%)
Length = 548
Score = 61.6 bits (148), Expect = 2e-10
Identities = 33/69 (47%), Positives = 42/69 (60%)
Frame = +2
Query: 137 GYNPDTKFVLQDLEEEKKISALYYHSEKLAIAFALWKTCGKNTAIRIFKNLRVCGDCHSW 196
G P TK VLQD+EE+ K L HSEKLA+ L T +++ KNLR+C DCH+
Sbjct: 2 GCLPMTKSVLQDVEEQDKEQILCGHSEKLAVVLGLINT-SPGQPLQVIKNLRICDDCHAV 178
Query: 197 IKFVSLLTG 205
IK +S L G
Sbjct: 179 IKVISRLEG 205
>TC83657 weakly similar to GP|11994382|dbj|BAB02341.
gb|AAB82628.1~gene_id:MIL23.2~similar to unknown protein
{Arabidopsis thaliana}, partial (10%)
Length = 1299
Score = 58.9 bits (141), Expect = 1e-09
Identities = 44/131 (33%), Positives = 71/131 (53%), Gaps = 2/131 (1%)
Frame = +3
Query: 1 MIDLLGRAKRFEEATMLIEE-GKNPDVIQWRTLLNACKIHGEVEMAEKFMKKM-LDQAPR 58
M+DLLGRA + +EA LI+ P+ ++ AC IH +++MAE+ MK + D A
Sbjct: 189 MVDLLGRAGKLKEAYELIKRMPMKPNETVLGAMIGACWIHSDMKMAEQVMKMIGADSAAC 368
Query: 59 DGGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKKTPAMSWVDIDREVHTFMAGDLSHPR 118
++LL+NIYA++ KW+ ++S+ D +K P S + + A DLS +
Sbjct: 369 VNSHNVLLSNIYAASEKWEKAEMIRSSMVDGGSEKIPGYSSIILSNS-----AVDLSISK 533
Query: 119 AHEISEMLHEL 129
EIS ++ L
Sbjct: 534 --EISRQMNGL 560
>BE941714 weakly similar to GP|11994734|dbj selenium-binding protein-like
{Arabidopsis thaliana}, partial (10%)
Length = 619
Score = 58.5 bits (140), Expect = 2e-09
Identities = 32/89 (35%), Positives = 53/89 (58%), Gaps = 6/89 (6%)
Frame = +2
Query: 1 MIDLLGRAKRFEEATMLIEEGKNP-----DVIQWRTLLNACKIHGEVEMAEKFMKKMLDQ 55
++DLL RA FEEA ++I + N + + WR L+AC HGE ++AE +K+L
Sbjct: 338 LVDLLSRAGLFEEAMVMIRKITNSWNGSEETLAWRAFLSACCNHGETQLAELAAEKVLQL 517
Query: 56 APR-DGGTHILLTNIYASAGKWDNVIEMK 83
G ++LL+N+YA++GK ++ +K
Sbjct: 518 DNHIHSGVYVLLSNLYAASGKHNDARRVK 604
Score = 26.9 bits (58), Expect = 5.5
Identities = 12/52 (23%), Positives = 24/52 (46%)
Frame = +2
Query: 1 MIDLLGRAKRFEEATMLIEEGKNPDVIQWRTLLNACKIHGEVEMAEKFMKKM 52
++D+ + E A L + DV+ W +++ +HG+ + A K M
Sbjct: 32 LLDMYAKCGNLELAKRLFDSMNMRDVVCWNAMISGMAMHGDGKGALKLFYDM 187
>AW127386
Length = 360
Score = 43.1 bits (100), Expect = 7e-05
Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Frame = +2
Query: 98 SWVDIDREVHTFMAGDLSHPRAHEISEMLHELIEKVITLGYNPDTKFVL--QDLEE 151
+WVD+ RE+ F+AGD S+PR+ EIS M+ L + GY P V +D EE
Sbjct: 14 AWVDVGRELCPFLAGDTSNPRSCEISPMMKRLNILMKDAGYAPSEGVVSSEEDFEE 181
>AW687696 weakly similar to PIR|T49965|T499 hypothetical protein F8M21.190 -
Arabidopsis thaliana, partial (16%)
Length = 289
Score = 42.0 bits (97), Expect = 2e-04
Identities = 24/47 (51%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = +2
Query: 1 MIDLLGRAKRFEEATMLIEEGK-NPDVIQWRTLLNACKIHGEVEMAE 46
M+DLLGRA F EA LI+ + I WRTLL AC+ +G VE+ E
Sbjct: 149 MVDLLGRAGLFVEAYELIKSMPVECNAIIWRTLLAACRNYGNVELGE 289
>BG645006 similar to GP|17064738|gb Unknown protein {Arabidopsis thaliana},
partial (34%)
Length = 727
Score = 37.7 bits (86), Expect = 0.003
Identities = 24/76 (31%), Positives = 39/76 (50%), Gaps = 4/76 (5%)
Frame = +1
Query: 10 RFEEATMLIEEGK---NPDVIQWRTLLNACKIHGEVEMAEKFMKKMLD-QAPRDGGTHIL 65
+ E+ L EE K +PDV+ + LL AC +VE AE+ + ++ + D T+
Sbjct: 376 KLEKVPKLFEELKVNTSPDVVTFNLLLTACASENDVETAERVLLQLKKAKVDPDWVTYST 555
Query: 66 LTNIYASAGKWDNVIE 81
LTN+Y D+ +E
Sbjct: 556 LTNLYIRNASVDDCLE 603
>BG584228 weakly similar to PIR|F71411|F71 hypothetical protein - Arabidopsis
thaliana, partial (19%)
Length = 827
Score = 32.7 bits (73), Expect = 0.10
Identities = 24/100 (24%), Positives = 41/100 (41%), Gaps = 1/100 (1%)
Frame = -3
Query: 24 PDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQAPRDGGTHIL-LTNIYASAGKWDNVIEM 82
P + +W LL A ++HG+ +M + +K+ + G H++ I G+ E
Sbjct: 414 PTISEWGVLLGAFRMHGKTKMGKITAEKLFELDDEYFGNHVV**ACICWQMGRSHC*QEE 235
Query: 83 KSAGRDLRLKKTPAMSWVDIDREVHTFMAGDLSHPRAHEI 122
R + W+ + +H F A D SH EI
Sbjct: 234 NERQR**EI------CWIAVKNRIHVFQANDSSHEMNSEI 133
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.321 0.137 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,667,810
Number of Sequences: 36976
Number of extensions: 83286
Number of successful extensions: 438
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 413
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 420
length of query: 207
length of database: 9,014,727
effective HSP length: 92
effective length of query: 115
effective length of database: 5,612,935
effective search space: 645487525
effective search space used: 645487525
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (26.2 bits)
Medicago: description of AC146711.8