BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146711.13 - phase: 0 /pseudo
(895 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC80825 similar to PIR|F84614|F84614 probable kinesin heavy chai... 374 e-162
TC88934 similar to PIR|T00434|T00434 probable kinesin heavy chai... 340 1e-93
TC79642 similar to PIR|T07397|T07397 kinesin heavy chain-like pr... 253 3e-77
BQ149758 weakly similar to PIR|F84614|F8 probable kinesin heavy ... 243 3e-64
TC81646 similar to GP|13536981|dbj|BAB40709. BY-2 kinesin-like p... 133 2e-59
TC83691 similar to PIR|T00434|T00434 probable kinesin heavy chai... 143 5e-40
TC80383 similar to PIR|C85065|C85065 kinesin-like protein [impor... 157 2e-38
BE999515 similar to PIR|T07397|T0 kinesin heavy chain-like prote... 157 2e-38
TC80343 similar to PIR|C96661|C96661 kinesin-like protein 73641... 135 7e-32
AJ499156 similar to GP|10176794|db kinesin-like protein {Arabido... 130 3e-30
TC82643 similar to GP|10998143|dbj|BAB03114. kinesin (centromere... 117 3e-26
AW690287 similar to GP|9759626|db contains similarity to kinesin... 112 5e-25
AW689037 similar to GP|10177316|d kinesin-like protein {Arabidop... 104 2e-22
AL371575 similar to PIR|C85065|C85 kinesin-like protein [importe... 92 9e-19
CA989870 similar to GP|18201934|g kinesin-like protein heavy cha... 88 2e-17
AW685809 similar to PIR|E84792|E8 probable kinesin heavy chain [... 86 8e-17
AW692096 homologue to GP|10140692|gb kinesin-like protein {Oryza... 84 3e-16
BI272139 similar to PIR|C96661|C9 kinesin-like protein 73641-79... 78 1e-14
TC80963 weakly similar to PIR|F84614|F84614 probable kinesin hea... 77 3e-14
BG583316 homologue to GP|11994617|db contains similarity to kine... 74 2e-13
>TC80825 similar to PIR|F84614|F84614 probable kinesin heavy chain
[imported] - Arabidopsis thaliana, partial (16%)
Length = 1771
Score = 374 bits (960), Expect(3) = e-162
Identities = 188/189 (99%), Positives = 189/189 (99%)
Frame = +3
Query: 531 YNEQIRDLLATGPASKRLEIKQNYEGHHHVPGVVEAKVDNISDVWTVLQAGSNARAVGSN 590
YNEQIRDLLATGPASKRLEIKQNYEGHHHVPGVVEAKVDNISDVWTVLQAGSNARAVGSN
Sbjct: 60 YNEQIRDLLATGPASKRLEIKQNYEGHHHVPGVVEAKVDNISDVWTVLQAGSNARAVGSN 239
Query: 591 NVNEHSSRSHCMLCIMVKTKNLMNGECTKSKLWLVDLSGSERLAKTDVQGERLKEAQNIN 650
NVNEHSSRSHCMLCIMVKTKNLMNGECTKSKLWLVDL+GSERLAKTDVQGERLKEAQNIN
Sbjct: 240 NVNEHSSRSHCMLCIMVKTKNLMNGECTKSKLWLVDLAGSERLAKTDVQGERLKEAQNIN 419
Query: 651 RSLSALGDVISALAAKSSHIPYRNSKLTHLLQDSLGGDSKTLMFVQISPSDQDVGETLSS 710
RSLSALGDVISALAAKSSHIPYRNSKLTHLLQDSLGGDSKTLMFVQISPSDQDVGETLSS
Sbjct: 420 RSLSALGDVISALAAKSSHIPYRNSKLTHLLQDSLGGDSKTLMFVQISPSDQDVGETLSS 599
Query: 711 LNFATRVRG 719
LNFATRVRG
Sbjct: 600 LNFATRVRG 626
Score = 208 bits (529), Expect(3) = e-162
Identities = 112/169 (66%), Positives = 124/169 (73%)
Frame = +2
Query: 725 VKKQIDTGELQKTKAMLDKARSECRCKEESLRKLEESLQNIESKAKGKDNIHKNLQEKIK 784
++ ++ ++ K L K K+ ++SLQNIESKAKGKDNIHKNLQEKIK
Sbjct: 644 LRSKLIQANFKRQKQCLTKHEVSAEVKKNP*GN*KKSLQNIESKAKGKDNIHKNLQEKIK 823
Query: 785 ELEGQIKLKTSMQNQSEKQVSQLCERLKGKEETCCTLQHKVKELERKIKEQLQTETANFQ 844
ELEGQI+LKTSMQNQSEKQVSQLCE+LKGKEETCCTLQHKVKELERKIKEQLQTETANFQ
Sbjct: 824 ELEGQIELKTSMQNQSEKQVSQLCEKLKGKEETCCTLQHKVKELERKIKEQLQTETANFQ 1003
Query: 845 QKVCNTFAKLLPTLFSNSLFLPKVWDLEKKLKDQLQGSESESSFLKDKV 893
Q K WDLEKKLKDQLQGSESESSFLKDK+
Sbjct: 1004Q---------------------KAWDLEKKLKDQLQGSESESSFLKDKI 1087
Score = 79.7 bits (195), Expect = 5e-15
Identities = 41/53 (77%), Positives = 43/53 (80%)
Frame = +1
Query: 720 VELDPVKKQIDTGELQKTKAMLDKARSECRCKEESLRKLEESLQNIESKAKGK 772
VEL PVKKQIDTGELQKTKAMLDKARSECR KEESLRKLEE + +GK
Sbjct: 628 VELGPVKKQIDTGELQKTKAMLDKARSECRSKEESLRKLEEKFAKH*EQGQGK 786
Score = 30.8 bits (68), Expect(3) = e-162
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +2
Query: 512 SKERSETFSYDISVSVLEV 530
SKERSET S+ ISVSVLEV
Sbjct: 2 SKERSETCSFYISVSVLEV 58
>TC88934 similar to PIR|T00434|T00434 probable kinesin heavy chain
[imported] - Arabidopsis thaliana, partial (49%)
Length = 2193
Score = 340 bits (872), Expect = 1e-93
Identities = 184/400 (46%), Positives = 260/400 (65%), Gaps = 7/400 (1%)
Frame = +3
Query: 378 YYEEMTQRKKLFNEVQEAKGNIRVFCRCRPLNKVEMSSGCTTVVDFDAAKDGCLGILA-- 435
Y+ + + +KL+NEVQ+ KG+IRV+CR RP + + T + +DG + I
Sbjct: 24 YHRVLEENRKLYNEVQDLKGSIRVYCRVRPFLPGQPNHSSTV----ENIEDGVITINVPS 191
Query: 436 -TGSSKKLFRFDRVYTPKDDQVDVFADASSMVISVLDGYNVCIFAYGQTGTGKTFTMEG- 493
G ++ F F++V+ P Q +VFAD +V SVLDG+NVCIFAYGQTG+GKTFTM G
Sbjct: 192 KNGKGRRSFNFNKVFGPSAAQGEVFADMQPLVRSVLDGFNVCIFAYGQTGSGKTFTMTGP 371
Query: 494 ---TEQNRGVNYRTLEHLFRVSKERSETFSYDISVSVLEVYNEQIRDLLATGPASKRLEI 550
TE+++GVNYR L LF + +R +TF YD+SV ++E+YNEQ+RDLL T +KRLEI
Sbjct: 372 KEITEKSQGVNYRALSDLFYTANQRKDTFRYDVSVQMIEIYNEQVRDLLVTDGTNKRLEI 551
Query: 551 KQNYEGHHHVPGVVEAKVDNISDVWTVLQAGSNARAVGSNNVNEHSSRSHCMLCIMVKTK 610
+ N + VP +V + +DV ++ G RAVG+ +N+ SSRSH L + V+ +
Sbjct: 552 RSNSQRGLSVPDASLVQVSSTNDVIELMNLGHKNRAVGATALNDRSSRSHSCLTVHVQGR 731
Query: 611 NLMNGECTKSKLWLVDLSGSERLAKTDVQGERLKEAQNINRSLSALGDVISALAAKSSHI 670
+L +G + + LVDL+GSER+ K++ G+RLKEAQ+IN+SLSALGDVI++LA K+ H+
Sbjct: 732 DLTSGAVLRGCMHLVDLAGSERVDKSEATGDRLKEAQHINKSLSALGDVIASLAQKNQHV 911
Query: 671 PYRNSKLTHLLQDSLGGDSKTLMFVQISPSDQDVGETLSSLNFATRVRGVELDPVKKQID 730
PYRNSKLT LLQDSLGG +KTLMFV ISP VGET+S+L FA RV VEL + D
Sbjct: 912 PYRNSKLTQLLQDSLGGQAKTLMFVHISPEANAVGETISTLKFAERVATVELGAARVNKD 1091
Query: 731 TGELQKTKAMLDKARSECRCKEESLRKLEESLQNIESKAK 770
++++ K + ++ KE + LE S+ K +
Sbjct: 1092GADVKELKEQIASLKAALARKEGN---LEHSISGSSGKCR 1202
>TC79642 similar to PIR|T07397|T07397 kinesin heavy chain-like protein (clone
PKCBP) - potato, partial (42%)
Length = 2321
Score = 253 bits (647), Expect(2) = 3e-77
Identities = 139/329 (42%), Positives = 206/329 (62%), Gaps = 3/329 (0%)
Frame = +3
Query: 441 KLFRFDRVYTPKDDQVDVFADASSMVISVLDGYNVCIFAYGQTGTGKTFTMEGTEQNRGV 500
K + +DRV+ Q VF D +V S +DGYNVCIFAYGQTG+GKTFT+ G+E N G+
Sbjct: 1083 KQYIYDRVFGGDATQETVFEDTRYLVQSAVDGYNVCIFAYGQTGSGKTFTIYGSEDNPGL 1262
Query: 501 NYRTLEHLFRVSKERSETFSYDISVSVLEVYNEQIRDLLATGPAS-KRLEIKQNYEGHHH 559
R + LFR+ + S +S+ + ++E+Y + + DLL A RL+IK++ G
Sbjct: 1263 TPRAIAELFRILRRDSNKYSFSLKAYMVELYQDTLIDLLLPKNAKHSRLDIKKDSTGMVV 1442
Query: 560 VPGVVEAKVDNISDVWTVLQAGSNARAVGSNNVNEHSSRSHCMLCIMVKTKNLMNGECTK 619
V V + I ++ ++Q GS R + +NE SSRSH +L I+V++ NL + +
Sbjct: 1443 VENVTVMSISTIEELNYIIQKGSERRHISGTQMNEESSRSHLILSIVVESTNLQSQSVAR 1622
Query: 620 SKLWLVDLSGSERLAKTDVQGERLKEAQNINRSLSALGDVISALAAKSSHIPYRNSKLTH 679
KL VDL+GSER+ K+ G +LKEAQ+IN+SLSALGDVISAL++ H PYRN KLT
Sbjct: 1623 GKLSFVDLAGSERVKKSGSMGSQLKEAQSINKSLSALGDVISALSSGGQHTPYRNHKLTM 1802
Query: 680 LLQDSLGGDSKTLMFVQISPSDQDVGETLSSLNFATRVRGVELDPVKKQIDTGELQKTKA 739
L+ DSLGG++KTLMFV +SP + + ET +SL +A+RVR + DP K + + E+ + K
Sbjct: 1803 LMSDSLGGNAKTLMFVNVSPIESSLDETHNSLMYASRVRSIVNDP-SKNVSSKEIARLKK 1979
Query: 740 MLD--KARSECRCKEESLRKLEESLQNIE 766
++ K ++ + E L ++++ N E
Sbjct: 1980 LVTYWKQQAGRAIEHEDLEEIQDERPNKE 2066
Score = 54.7 bits (130), Expect(2) = 3e-77
Identities = 49/225 (21%), Positives = 105/225 (45%), Gaps = 17/225 (7%)
Frame = +2
Query: 207 RASKESVPPVPSDFIECNYCAAQIEIPSSQIKVMQTKSTAKYENKIKELTMQCELKAKEC 266
+A+K+++ V SD C + ++ +++ S ++ + + + K C
Sbjct: 350 KANKQNLQAVTSD---CERLRSLCNKKDQALQAIESTSKKDLVETNNQVLQKLKYELKYC 520
Query: 267 YEAWTSLTEMSREVEKVQMELDQVTFKSFTTELTAEKQAENLRSI--------SNRYELD 318
S E + + + L+Q S + +E+ + LR + S Y+L+
Sbjct: 521 KGELDSAEETIKTLRSEKAILEQKL--SVLEKRNSEESSSLLRKLEQERKAVKSEVYDLE 694
Query: 319 KK--KWAEAIISLQEKVQLMKSEQSRL--SFKA----HECVDSIPELNKMVYAVQELVK- 369
+K + + +++ + + + SE S L +FK E + I N+ ++ ++ +
Sbjct: 695 RKIEGYRQELMAAKSIISVKDSELSALQNNFKELEELREMKEDIDRKNEQTASILKMQRA 874
Query: 370 QCEDLKVKYYEEMTQRKKLFNEVQEAKGNIRVFCRCRPLNKVEMS 414
Q +++ Y EE RK+ FN +++ KG IRV+CR RP+++ E+S
Sbjct: 875 QLAEMEGLYKEEQVLRKRYFNVIEDMKGKIRVYCRLRPISEKEVS 1009
Score = 32.0 bits (71), Expect = 1.1
Identities = 34/159 (21%), Positives = 66/159 (41%)
Frame = +2
Query: 734 LQKTKAMLDKARSECRCKEESLRKLEESLQNIESKAKGKDNIHKNLQEKIKELEGQIKLK 793
L+ K L S+C K +++LQ IES +K KD + N + +++L+ ++K
Sbjct: 347 LKANKQNLQAVTSDCERLRSLCNKKDQALQAIESTSK-KDLVETN-NQVLQKLKYELKYC 520
Query: 794 TSMQNQSEKQVSQLCERLKGKEETCCTLQHKVKELERKIKEQLQTETANFQQKVCNTFAK 853
+ +E E +K L+ K+ LE++ E+ + +Q+
Sbjct: 521 KGELDSAE-------ETIKTLRSEKAILEQKLSVLEKRNSEESSSLLRKLEQE------- 658
Query: 854 LLPTLFSNSLFLPKVWDLEKKLKDQLQGSESESSFLKDK 892
+V+DLE+K++ Q + S + K
Sbjct: 659 -------RKAVKSEVYDLERKIEGYRQELMAAKSIISVK 754
>BQ149758 weakly similar to PIR|F84614|F8 probable kinesin heavy chain
[imported] - Arabidopsis thaliana, partial (11%)
Length = 367
Score = 243 bits (619), Expect = 3e-64
Identities = 119/121 (98%), Positives = 121/121 (99%)
Frame = +3
Query: 315 YELDKKKWAEAIISLQEKVQLMKSEQSRLSFKAHECVDSIPELNKMVYAVQELVKQCEDL 374
YELDKKKWAEAIISLQEKVQLMKSEQSRLSF+AHECVDSIPELNKMVYAVQELVKQCEDL
Sbjct: 3 YELDKKKWAEAIISLQEKVQLMKSEQSRLSFEAHECVDSIPELNKMVYAVQELVKQCEDL 182
Query: 375 KVKYYEEMTQRKKLFNEVQEAKGNIRVFCRCRPLNKVEMSSGCTTVVDFDAAKDGCLGIL 434
KVKYYEEMTQRKKLFNEVQEAKGNIRVFCRCRPLNKVEMS+GCTTVVDFDAAKDGCLGIL
Sbjct: 183 KVKYYEEMTQRKKLFNEVQEAKGNIRVFCRCRPLNKVEMSAGCTTVVDFDAAKDGCLGIL 362
Query: 435 A 435
A
Sbjct: 363 A 365
>TC81646 similar to GP|13536981|dbj|BAB40709. BY-2 kinesin-like protein 5
{Nicotiana tabacum}, partial (50%)
Length = 1456
Score = 133 bits (335), Expect(2) = 2e-59
Identities = 73/149 (48%), Positives = 97/149 (64%)
Frame = +3
Query: 620 SKLWLVDLSGSERLAKTDVQGERLKEAQNINRSLSALGDVISALAAKSSHIPYRNSKLTH 679
SKLW+VDL GSERL KT +G L E + IN SLSAL DV++AL K SH+PYRNSKLT
Sbjct: 513 SKLWMVDLGGSERLLKTGARGLTLDEGRAINLSLSALADVLAALKRKRSHVPYRNSKLTQ 692
Query: 680 LLQDSLGGDSKTLMFVQISPSDQDVGETLSSLNFATRVRGVELDPVKKQIDTGELQKTKA 739
LL+DSLG SK LM V ISPS++DV ET+ SLNFA R R +E K++ ++ +
Sbjct: 693 LLRDSLGDGSKVLMLVHISPSEEDVCETICSLNFAKRARAIE---SIKEVPMESKKQKEM 863
Query: 740 MLDKARSECRCKEESLRKLEESLQNIESK 768
+ + + E+ + L + +QN+E K
Sbjct: 864 KIMELEENIKEAEKQRQSLGDQIQNVELK 950
Score = 115 bits (287), Expect(2) = 2e-59
Identities = 64/150 (42%), Positives = 91/150 (60%), Gaps = 1/150 (0%)
Frame = +1
Query: 455 QVDVFADASSMVISVLDGYNVCIFAYGQTGTGKTFTMEGTEQNRGVNYRTLEHLFR-VSK 513
Q VF D ++ S +DG+NVC+FAYGQTGTGKTFTM+GT + G+ R LE LFR S
Sbjct: 16 QESVFVDVEPILRSAMDGHNVCVFAYGQTGTGKTFTMDGTNEQPGIIPRALEELFRQASM 195
Query: 514 ERSETFSYDISVSVLEVYNEQIRDLLATGPASKRLEIKQNYEGHHHVPGVVEAKVDNISD 573
+ S +F++ S+S+LEVY +RDLL A+ L I+ + +G + G+ E ++ + +
Sbjct: 196 DGSSSFTF--SMSMLEVYMGNVRDLL----ANSNLNIQTDPKGLVEIEGLSEVQISDCAK 357
Query: 574 VWTVLQAGSNARAVGSNNVNEHSSRSHCML 603
G R+ NVNE SSRSHC +
Sbjct: 358 AKWWYNKGRRCRSTSWTNVNEASSRSHCFI 447
>TC83691 similar to PIR|T00434|T00434 probable kinesin heavy chain
[imported] - Arabidopsis thaliana, partial (22%)
Length = 1056
Score = 143 bits (361), Expect(2) = 5e-40
Identities = 74/149 (49%), Positives = 103/149 (68%)
Frame = +1
Query: 612 LMNGECTKSKLWLVDLSGSERLAKTDVQGERLKEAQNINRSLSALGDVISALAAKSSHIP 671
++ G + + LVDL+GSER KT+ G+RLKEAQ+IN+SLSALGDVI++LA K++H+P
Sbjct: 157 VLTGSIIRGCMHLVDLAGSERADKTEATGDRLKEAQHINKSLSALGDVIASLAHKNAHVP 336
Query: 672 YRNSKLTHLLQDSLGGDSKTLMFVQISPSDQDVGETLSSLNFATRVRGVELDPVKKQIDT 731
YRNSKLT LLQD+LGG +KTLMFV ISP +GETLS+L FA RV VEL + D
Sbjct: 337 YRNSKLTQLLQDALGGQAKTLMFVHISPEPDALGETLSTLKFAERVSTVELGTARVNKDN 516
Query: 732 GELQKTKAMLDKARSECRCKEESLRKLEE 760
E+++ K + ++ K+ +++
Sbjct: 517 TEVKELKEQIAMLKAALARKDGEAEHIQQ 603
Score = 40.4 bits (93), Expect(2) = 5e-40
Identities = 22/53 (41%), Positives = 29/53 (54%)
Frame = +3
Query: 548 LEIKQNYEGHHHVPGVVEAKVDNISDVWTVLQAGSNARAVGSNNVNEHSSRSH 600
LEI+ + +VP V SDV T++ G RAVGS +N+ SSRSH
Sbjct: 6 LEIRNSSNNGINVPDASLVPVSTTSDVITLMNLGHKNRAVGSTAMNDRSSRSH 164
>TC80383 similar to PIR|C85065|C85065 kinesin-like protein [imported] -
Arabidopsis thaliana, partial (26%)
Length = 897
Score = 157 bits (396), Expect = 2e-38
Identities = 84/181 (46%), Positives = 116/181 (63%)
Frame = +1
Query: 542 GPASKRLEIKQNYEGHHHVPGVVEAKVDNISDVWTVLQAGSNARAVGSNNVNEHSSRSHC 601
G K+ IK + G+ V + V+++ +V +L +N+R+VG +NE SSRSH
Sbjct: 31 GTPGKQYSIKHDASGNTLVSDLTVVDVESVKEVAFLLNQAANSRSVGKTQMNEQSSRSHF 210
Query: 602 MLCIMVKTKNLMNGECTKSKLWLVDLSGSERLAKTDVQGERLKEAQNINRSLSALGDVIS 661
+ + + N + + L L+DL+GSERL+++ G+RLKE Q IN+SLS+L DVI
Sbjct: 211 VFTLRIYGVNESTDQQVQGVLNLIDLAGSERLSRSGSTGDRLKETQAINKSLSSLSDVIF 390
Query: 662 ALAAKSSHIPYRNSKLTHLLQDSLGGDSKTLMFVQISPSDQDVGETLSSLNFATRVRGVE 721
ALA K HIP+RNSKLT+LLQ LGGDSKTLMFV I+P GE+L SL FA+RV E
Sbjct: 391 ALAKKEDHIPFRNSKLTYLLQPCLGGDSKTLMFVNIAPDQASSGESLCSLRFASRVNACE 570
Query: 722 L 722
+
Sbjct: 571 I 573
>BE999515 similar to PIR|T07397|T0 kinesin heavy chain-like protein (clone
PKCBP) - potato, partial (13%)
Length = 526
Score = 157 bits (396), Expect = 2e-38
Identities = 87/182 (47%), Positives = 122/182 (66%)
Frame = +2
Query: 579 QAGSNARAVGSNNVNEHSSRSHCMLCIMVKTKNLMNGECTKSKLWLVDLSGSERLAKTDV 638
Q GS R +NE SSRSH +L I++++ NL + + KL VDL+GSER+ K+
Sbjct: 2 QRGSERRHTAGTQMNEESSRSHRILSIVIESVNLQSQSTARGKLSFVDLAGSERIKKSGS 181
Query: 639 QGERLKEAQNINRSLSALGDVISALAAKSSHIPYRNSKLTHLLQDSLGGDSKTLMFVQIS 698
+G +LKEAQ+IN+SLSALGDVISAL++ HIPYRN KLT L+ DSLGG++KTLMFV +S
Sbjct: 182 EGSQLKEAQSINKSLSALGDVISALSSGGQHIPYRNHKLTMLMSDSLGGNAKTLMFVNVS 361
Query: 699 PSDQDVGETLSSLNFATRVRGVELDPVKKQIDTGELQKTKAMLDKARSECRCKEESLRKL 758
P + + ET +SL +A+RVR + DP K I + E+ + K ++ KE++ RK
Sbjct: 362 PVESSLDETHNSLMYASRVRSIVNDP-SKNISSKEIARLKKIV------AYWKEQAGRKG 520
Query: 759 EE 760
E+
Sbjct: 521 ED 526
>TC80343 similar to PIR|C96661|C96661 kinesin-like protein 73641-79546
[imported] - Arabidopsis thaliana, partial (17%)
Length = 1406
Score = 135 bits (340), Expect = 7e-32
Identities = 74/152 (48%), Positives = 101/152 (65%)
Frame = +3
Query: 608 KTKNLMNGECTKSKLWLVDLSGSERLAKTDVQGERLKEAQNINRSLSALGDVISALAAKS 667
KT +L+ G C L LVDL+GSER+ +++ G+RLKEA N+SLSALGDVI ALA KS
Sbjct: 3 KTNSLLRG-C----LHLVDLAGSERVDRSEATGDRLKEAHXXNKSLSALGDVIFALAQKS 167
Query: 668 SHIPYRNSKLTHLLQDSLGGDSKTLMFVQISPSDQDVGETLSSLNFATRVRGVELDPVKK 727
H+PYRNSKLT LLQ SLGG +KTLMFVQ++P ET+S+L FA RV GVEL +
Sbjct: 168 PHVPYRNSKLTQLLQSSLGGQAKTLMFVQLNPDVASYSETISTLKFAERVSGVELGAARS 347
Query: 728 QIDTGELQKTKAMLDKARSECRCKEESLRKLE 759
+ ++++ + + K+E + +L+
Sbjct: 348 NKEGRDVRELMEQMSFLKDAMARKDEEIERLQ 443
>AJ499156 similar to GP|10176794|db kinesin-like protein {Arabidopsis
thaliana}, partial (22%)
Length = 678
Score = 130 bits (326), Expect = 3e-30
Identities = 76/175 (43%), Positives = 100/175 (56%), Gaps = 29/175 (16%)
Frame = +1
Query: 577 VLQAGSNARAVGSNNVNEHSSRSHCMLCIMVKTKNLMNGECTKSKLWLVDLSGSERLAKT 636
+L +N+R+VG +NE SSRSH + + + N + + L L+DL+GSERL+++
Sbjct: 13 LLNQAANSRSVGKTQMNEQSSRSHFVFTLRIYGVNESTDQQVQGVLNLIDLAGSERLSRS 192
Query: 637 DVQGERLKEAQ-----------------------------NINRSLSALGDVISALAAKS 667
G+RLKE Q IN+SLS+L DVI ALA K
Sbjct: 193 GSTGDRLKETQVCKTIRCFLFYTVLLL*FIIIQTSFTCN*AINKSLSSLSDVIFALAKKE 372
Query: 668 SHIPYRNSKLTHLLQDSLGGDSKTLMFVQISPSDQDVGETLSSLNFATRVRGVEL 722
HIP+RNSKLT+LLQ LGGDSKTLMFV I+P GE+L SL FA+RV E+
Sbjct: 373 DHIPFRNSKLTYLLQPCLGGDSKTLMFVNIAPDQASSGESLCSLRFASRVNACEI 537
>TC82643 similar to GP|10998143|dbj|BAB03114. kinesin (centromere protein)
like heavy chain-like protein {Arabidopsis thaliana},
partial (25%)
Length = 880
Score = 117 bits (292), Expect = 3e-26
Identities = 76/217 (35%), Positives = 128/217 (58%), Gaps = 5/217 (2%)
Frame = +2
Query: 596 SSRSHCMLCIMVKTK---NLMNGEC-TKSKLWLVDLSGSERLAKTDVQGERLKEAQNINR 651
SSRSH + + V++ + GE T S+L L+DL+GSE +K + G R +E IN+
Sbjct: 11 SSRSHTIFTLTVESSPCGEYIEGEAVTLSQLNLIDLAGSES-SKAETIGMRRREGSYINK 187
Query: 652 SLSALGDVISALA-AKSSHIPYRNSKLTHLLQDSLGGDSKTLMFVQISPSDQDVGETLSS 710
SL LG VIS L AK+SHIPYR+SKLT +LQ SL G + + ++PS ET ++
Sbjct: 188 SLLTLGTVISKLTEAKASHIPYRDSKLTRVLQSSLSGHGRVSLICTVTPSSSSSEETHNT 367
Query: 711 LNFATRVRGVELDPVKKQIDTGELQKTKAMLDKARSECRCKEESLRKLEESLQNIESKAK 770
L FA R + +E+ + +I K+++ K + E +C +E L +L+ + ++ K
Sbjct: 368 LKFAHRAKHIEIQAAQNKI-----IDEKSLIKKYQQEIQCLKEELEQLKRGIVTVQPKDI 532
Query: 771 GKDNIHKNLQEKIKELEGQIKLKTSMQNQSEKQVSQL 807
G D+I L++K++ +GQ+KL++ ++ + + + + L
Sbjct: 533 GDDDI-VLLKQKLE--DGQVKLQSRLEQEEDAKAALL 634
>AW690287 similar to GP|9759626|db contains similarity to kinesin heavy
chain~gene_id:MNA5.20 {Arabidopsis thaliana}, partial
(17%)
Length = 676
Score = 112 bits (281), Expect = 5e-25
Identities = 67/149 (44%), Positives = 92/149 (60%), Gaps = 3/149 (2%)
Frame = +2
Query: 382 MTQRKKLFNEVQEAKGNIRVFCRCRPLNKVEMSSGCTTVVDF--DAAKDGCLGILATGSS 439
+ ++K+LFN++ +KG+IRVFCR RPL + E S VVDF D G + +S
Sbjct: 206 INEKKRLFNDLLTSKGSIRVFCRTRPLFEDEGPS----VVDFPDDYTIRVNTGDESLANS 373
Query: 440 KKLFRFDRVYTPKDDQVDVFADASSMVISVLDGYNVCIFAYGQTGTGKTFTMEGTEQNRG 499
KK F FD+VY P Q ++F+D +V S LDGYNV IFAYGQT +GKT TMEG+ +RG
Sbjct: 374 KKDFEFDKVYGPHVGQAELFSDVQPLVQSALDGYNVSIFAYGQTHSGKTHTMEGSSYDRG 553
Query: 500 VNYRTLEHLFRVSK-ERSETFSYDISVSV 527
+ R E LF ++ + + T Y V+V
Sbjct: 554 LYARCFEELFDLTNLDTTSTSQYKFCVTV 640
>AW689037 similar to GP|10177316|d kinesin-like protein {Arabidopsis
thaliana}, partial (13%)
Length = 662
Score = 104 bits (259), Expect = 2e-22
Identities = 72/212 (33%), Positives = 110/212 (50%), Gaps = 20/212 (9%)
Frame = +3
Query: 510 RVSKERSETFSYDISVSVLEVYNEQIRDLLA--------------TGPASKRLEIKQNYE 555
RV + E+ + I VS +E++ E++ DLL PA ++I++
Sbjct: 12 RVQDLKEESNEFLIRVSFIEIFKEEVFDLLDPNASKGESVCNAKFAAPARVPIQIRETLS 191
Query: 556 GHHHVPGVVEAKVDNISDVWTVLQAGSNARAVGSNNVNEHSSRSHCMLCIMVKTKNLMNG 615
G + GV E +V ++ + L GS +RA GS N+N SSRSH + I ++ KN +
Sbjct: 192 GGITLAGVTEPEVKTKEEMSSYLSRGSMSRATGSTNMNSQSSRSHAIFTITMEQKNGDDV 371
Query: 616 ECTKSKLWLVDLSGSERLAKTDVQGERLKEAQNINRSLSALGDVISALAAKSSHIPYRNS 675
C +KL LVDL+GSER +T G RLKE +IN+ L LG+VISAL + R
Sbjct: 372 LC--AKLHLVDLAGSERAKRTGADGMRLKEGIHINKGLLTLGNVISALGDERRRKRRRPC 545
Query: 676 KLTHL------LQDSLGGDSKTLMFVQISPSD 701
++ + + SLG +S T+M + P+D
Sbjct: 546 TVSRIAS*HAFCRISLGXNSXTVMIACVXPAD 641
>AL371575 similar to PIR|C85065|C85 kinesin-like protein [imported] -
Arabidopsis thaliana, partial (15%)
Length = 461
Score = 92.0 bits (227), Expect = 9e-19
Identities = 56/154 (36%), Positives = 80/154 (51%), Gaps = 2/154 (1%)
Frame = +1
Query: 334 QLMKSEQSRLSFKAHECVDSIPELNKMVYAVQELVKQCEDLKVKYYEEMTQRKKLFNEVQ 393
Q + +E+ +L +++ + +++L Q D + + E RKKL N V
Sbjct: 1 QKLHAEREKLEMADLSAMETRATFEEQKKFIRKLQDQLADKEFQVVEGEKLRKKLHNTVL 180
Query: 394 EAKGNIRVFCRCRPL--NKVEMSSGCTTVVDFDAAKDGCLGILATGSSKKLFRFDRVYTP 451
E KGNIRVFCR RPL ++ E T + G + + K+LF FD+V+
Sbjct: 181 ELKGNIRVFCRVRPLLQDRSETKMVVTYPTSIEMLGRG-IELEQNAGQKQLFTFDKVFND 357
Query: 452 KDDQVDVFADASSMVISVLDGYNVCIFAYGQTGT 485
Q DVF + S +V S LDGY VCIFAYGQTG+
Sbjct: 358 DASQHDVFTEISQLVQSALDGYKVCIFAYGQTGS 459
>CA989870 similar to GP|18201934|g kinesin-like protein heavy chain
{Arabidopsis thaliana}, partial (9%)
Length = 806
Score = 87.8 bits (216), Expect = 2e-17
Identities = 44/88 (50%), Positives = 58/88 (65%)
Frame = +2
Query: 670 IPYRNSKLTHLLQDSLGGDSKTLMFVQISPSDQDVGETLSSLNFATRVRGVELDPVKKQI 729
IPYRNSKLT +LQDSLGG +KTLMFV I+P +GET+S+L FA RV +EL K
Sbjct: 2 IPYRNSKLTQVLQDSLGGHAKTLMFVHINPEINALGETISTLKFAERVASIELGAAKSNK 181
Query: 730 DTGELQKTKAMLDKARSECRCKEESLRK 757
+TGE+++ K + +S KE L +
Sbjct: 182 ETGEIRELKEEISNIKSALERKENELEQ 265
>AW685809 similar to PIR|E84792|E8 probable kinesin heavy chain [imported] -
Arabidopsis thaliana, partial (14%)
Length = 651
Score = 85.5 bits (210), Expect = 8e-17
Identities = 44/110 (40%), Positives = 68/110 (61%), Gaps = 3/110 (2%)
Frame = +2
Query: 393 QEAKGNIRVFCRCRPLNKVEMSSGCTTVVDFDAAKDGC--LGILATGSSKKLFRFDRVYT 450
++ + N++V RCRPL+ E S VV + K + +A +K+F FD+V+
Sbjct: 236 KDKETNVQVLLRCRPLSDEEQRSNVPKVVSCNENKREVTVMHTIANKQVEKVFNFDKVFG 415
Query: 451 PKDDQVDVFADASSMVIS-VLDGYNVCIFAYGQTGTGKTFTMEGTEQNRG 499
PK Q ++ A + +++ VLDG+N +FAYGQTGTGKT+TMEG +N+G
Sbjct: 416 PKSQQRSIYDQAIAPIVNEVLDGFNCTVFAYGQTGTGKTYTMEGGMKNKG 565
>AW692096 homologue to GP|10140692|gb kinesin-like protein {Oryza sativa
(japonica cultivar-group)}, partial (14%)
Length = 387
Score = 83.6 bits (205), Expect = 3e-16
Identities = 47/106 (44%), Positives = 68/106 (63%), Gaps = 1/106 (0%)
Frame = +1
Query: 625 VDLSGSERLAKTDVQGERLKEAQNINRSLSALGDVISALA-AKSSHIPYRNSKLTHLLQD 683
+DL+GSE +KT+ G R KE IN+SL LG VI L+ K+SH+PYR+SKLT LLQ
Sbjct: 1 IDLAGSES-SKTETTGLRRKEGSYINKSLLTLGTVIGKLSEGKASHVPYRDSKLTRLLQS 177
Query: 684 SLGGDSKTLMFVQISPSDQDVGETLSSLNFATRVRGVELDPVKKQI 729
SL G + I+P+ ++ ET ++L FA+R + VE+ + +I
Sbjct: 178 SLSGHGHVSLICTITPASSNMEETHNTLKFASRAKRVEIYASRNKI 315
>BI272139 similar to PIR|C96661|C9 kinesin-like protein 73641-79546
[imported] - Arabidopsis thaliana, partial (10%)
Length = 381
Score = 78.2 bits (191), Expect = 1e-14
Identities = 42/111 (37%), Positives = 65/111 (57%), Gaps = 1/111 (0%)
Frame = +1
Query: 499 GVNYRTLEHLFRVSKERSETFSYDISVSVLEVYNEQIRDLLATGPASKRLEIKQNYEGHH 558
GVNYR L LF +S+ R + Y++ V ++E+YNEQ+RDLL++ KRL I + +
Sbjct: 7 GVNYRALHDLFHISQSRKNSIVYEVGVQMVEIYNEQVRDLLSSNGPQKRLGIWNTTQPNG 186
Query: 559 -HVPGVVEAKVDNISDVWTVLQAGSNARAVGSNNVNEHSSRSHCMLCIMVK 608
VP V+++ +V ++ G RA + +NE SSRSH +L I V+
Sbjct: 187 LAVPDASMHSVNSMQNVLELMNIGMMNRATSATALNERSSRSHSVLSIHVR 339
>TC80963 weakly similar to PIR|F84614|F84614 probable kinesin heavy chain
[imported] - Arabidopsis thaliana, partial (4%)
Length = 685
Score = 77.0 bits (188), Expect = 3e-14
Identities = 54/173 (31%), Positives = 89/173 (51%)
Frame = +1
Query: 251 KIKELTMQCELKAKECYEAWTSLTEMSREVEKVQMELDQVTFKSFTTELTAEKQAENLRS 310
K + CELK ++ ++ + E +KV D V S + + EN
Sbjct: 190 KFQLFVRDCELK-----QSPNAIPSDNDESKKVNENSDSVDENSMSNGIH-----ENSSD 339
Query: 311 ISNRYELDKKKWAEAIISLQEKVQLMKSEQSRLSFKAHECVDSIPELNKMVYAVQELVKQ 370
+ + + KK + L KVQ +K E L+ +S L +++ ++Q L +
Sbjct: 340 LGHTLPILKK-----VFDLSTKVQDLKKEHLALTDHVKTATESFTSL-EVLNSIQLLGSE 501
Query: 371 CEDLKVKYYEEMTQRKKLFNEVQEAKGNIRVFCRCRPLNKVEMSSGCTTVVDF 423
E LK KY +E ++R++L+NE+ E KGNI VFCRCRPL++ E ++G T+V +F
Sbjct: 502 YELLKRKYLDESSERRRLYNEIIELKGNIXVFCRCRPLSESEKANGFTSVDNF 660
>BG583316 homologue to GP|11994617|db contains similarity to kinesin
protein~gene_id:MGL6.9 {Arabidopsis thaliana}, partial
(15%)
Length = 725
Score = 74.3 bits (181), Expect = 2e-13
Identities = 44/101 (43%), Positives = 61/101 (59%), Gaps = 1/101 (0%)
Frame = +1
Query: 621 KLWLVDLSGSERLAKTDVQGERLK-EAQNINRSLSALGDVISALAAKSSHIPYRNSKLTH 679
K+ +DL+GSER A T + + E IN+SL AL + I AL HIP+R SKLT
Sbjct: 37 KISFIDLAGSERGADTTDNDRQTRIEGAEINKSLLALKECIRALDNDQIHIPFRGSKLTE 216
Query: 680 LLQDSLGGDSKTLMFVQISPSDQDVGETLSSLNFATRVRGV 720
+L+DS G+SKT+M ISP TL++L +A RV+ +
Sbjct: 217 VLRDSFVGNSKTVMISCISPGAGSCEHTLNTLRYADRVKSL 339
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.317 0.132 0.371
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,464,034
Number of Sequences: 36976
Number of extensions: 283898
Number of successful extensions: 1695
Number of sequences better than 10.0: 80
Number of HSP's better than 10.0 without gapping: 1646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1676
length of query: 895
length of database: 9,014,727
effective HSP length: 105
effective length of query: 790
effective length of database: 5,132,247
effective search space: 4054475130
effective search space used: 4054475130
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)
Medicago: description of AC146711.13