TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146693.3 - phase: 0 /pseudo
         (634 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC83803 weakly similar to GP|14209566|dbj|BAB56062. putative rec...    32  0.97
NP303217 NP303217|AJ297721.1|CAC20726.1 putative repetitive prol...    32  0.97
AL388729 PIR|S42643|S42 ubiquitin / ribosomal protein S27a - pot...    30  2.2
TC86671 similar to PIR|T06782|T06782 extensin - soybean, partial...    29  4.8
TC83145 weakly similar to GP|16604509|gb|AAL24260.1 AT5g58730/mz...    28  8.2

>TC83803 weakly similar to GP|14209566|dbj|BAB56062. putative
           receptor-protein kinase {Oryza sativa (japonica
           cultivar-group)}, partial (2%)
          Length = 754

 Score = 31.6 bits (70), Expect = 0.97
 Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
 Frame = +2

Query: 312 SPRTEKPNRISERLSPNSLPRLILS--PHTPKCLRPKSPKWPNKW 354
           S RT K + I+++L  ++   LIL   P TP CLRP  P  P  W
Sbjct: 113 STRTNKKHEINDKL*NHNHHPLILFHLPLTPSCLRPN*PF*PQLW 247


>NP303217 NP303217|AJ297721.1|CAC20726.1 putative repetitive proline-rich
           protein
          Length = 525

 Score = 31.6 bits (70), Expect = 0.97
 Identities = 26/73 (35%), Positives = 33/73 (44%), Gaps = 4/73 (5%)
 Frame = +1

Query: 311 KSPRTEKPNRISERL--SPNSLPRLILSPHTPKCLRPKSPKWPNKWPPLLKH*ESFPVN- 367
           K P T KP    + +  SPN  P L         L+P  PK P+K PP  K     P+N 
Sbjct: 175 KPPPTYKPPIKKQPINKSPNKKPLL---------LKPPLPKPPHKEPPSRKR----PINT 315

Query: 368 -PKQTPKLMSTPF 379
            P + P L+  PF
Sbjct: 316 PPDKKPPLLKPPF 354


>AL388729 PIR|S42643|S42 ubiquitin / ribosomal protein S27a - potato
           (fragment), partial (33%)
          Length = 425

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 33/114 (28%), Positives = 48/114 (41%), Gaps = 1/114 (0%)
 Frame = +1

Query: 317 KPNRISERLSPNSLPRLILSPHTPKCLRPKSPKWPNKWPPLLKH*ESFP-VNPKQTPKLM 375
           KP   +++ S  +  RLIL P T          W + WP LL    + P VNP  +P   
Sbjct: 100 KPRSKTKKESHRTKQRLILLPGTTS--------WED-WPALLA*RTTIPEVNPTLSP--- 243

Query: 376 STPFLMGVVSWKGQLLKPKELRERVLGFLVRKMRNRLIRTRPLTH*GLLSSTWR 429
               ++ V  W G+  K  + +ER      +K        +PL H*G +   WR
Sbjct: 244 ---LVLPVFRWVGRRKKDGK-KERT*QLKAQKKE-----FKPLRH*GRVEKLWR 378


>TC86671 similar to PIR|T06782|T06782 extensin - soybean, partial (41%)
          Length = 991

 Score = 29.3 bits (64), Expect = 4.8
 Identities = 26/78 (33%), Positives = 34/78 (43%), Gaps = 8/78 (10%)
 Frame = +3

Query: 309 K*KSPRTEKPNRISERLSPNSLPRLILSPHTP----KCLRPKSPKWPNKW----PPLLKH 360
           K KSP    P +  +  SP     +  SP  P    K L P  PK P K+    PP+ K+
Sbjct: 225 KYKSPPPPLPKKPYKYPSPPPPIYMYKSPPPPIYKYKSLPPPPPKKPYKYPSPPPPVYKY 404

Query: 361 *ESFPVNPKQTPKLMSTP 378
                 +PK+T K  S P
Sbjct: 405 KSPPSPSPKKTYKYPSPP 458


>TC83145 weakly similar to GP|16604509|gb|AAL24260.1 AT5g58730/mzn1_180
           {Arabidopsis thaliana}, partial (33%)
          Length = 904

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
 Frame = +1

Query: 327 PNSLPRLILSPHTPKCLRPKSPKWPN--KWPPLLKH*ESFPVNPKQTP 372
           P S+P L LS  + K  +    K P    W PLLK   S P + + TP
Sbjct: 295 PFSIPSLSLSISSLKWAQISPTKQPTFLSWSPLLKQPSSMPTSDQITP 438


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.364    0.164    0.631 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,161,546
Number of Sequences: 36976
Number of extensions: 364381
Number of successful extensions: 5010
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1517
Number of HSP's successfully gapped in prelim test: 207
Number of HSP's that attempted gapping in prelim test: 3437
Number of HSP's gapped (non-prelim): 1877
length of query: 634
length of database: 9,014,727
effective HSP length: 102
effective length of query: 532
effective length of database: 5,243,175
effective search space: 2789369100
effective search space used: 2789369100
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 14 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 36 (21.5 bits)
S2: 61 (28.1 bits)