BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146683.4 + phase: 0 /pseudo
(424 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BG582075 similar to PIR|T05242|T052 hypothetical protein F18A5.1... 395 e-110
BM815354 similar to PIR|T05242|T05 hypothetical protein F18A5.12... 320 9e-88
AW586232 similar to PIR|T05242|T05 hypothetical protein F18A5.12... 162 2e-40
TC88302 similar to GP|8953714|dbj|BAA98077.1 contains similarity... 70 2e-12
CB892263 similar to GP|13877621|gb Unknown protein {Arabidopsis ... 68 6e-12
TC92335 similar to GP|14517422|gb|AAK62601.1 AT5g53570/MNC6_11 {... 67 2e-11
TC81063 similar to GP|13877621|gb|AAK43888.1 Unknown protein {Ar... 59 3e-09
TC92258 similar to GP|9758258|dbj|BAB08757.1 contains similarity... 53 3e-07
TC90928 homologue to GP|21593435|gb|AAM65402.1 putative plant ad... 51 7e-07
AW225627 similar to GP|18377650|gb unknown protein {Arabidopsis ... 50 2e-06
BQ139629 similar to GP|15408841|dbj hypothetical protein~similar... 44 2e-04
TC85577 homologue to GP|6715512|gb|AAF26445.1| vacuolar H+-ATPas... 38 0.008
TC89538 weakly similar to GP|21689895|gb|AAM67508.1 unknown prot... 37 0.014
TC80366 similar to GP|13877617|gb|AAK43886.1 protein kinase-like... 37 0.014
TC93450 similar to GP|8777354|dbj|BAA96944.1 microtubule-associa... 37 0.019
TC80046 similar to SP|P22699|GUN6_DICDI Endoglucanase precursor ... 36 0.025
TC86742 similar to PIR|T01541|T01541 hypothetical protein A_IG00... 35 0.055
TC93280 weakly similar to GP|14190399|gb|AAK55680.1 AT3g06200/F2... 35 0.055
TC80893 similar to GP|4557063|gb|AAD22502.1| expressed protein {... 35 0.055
BQ751144 weakly similar to PIR|PQ0479|PQ04 pistil extensin-like ... 35 0.072
>BG582075 similar to PIR|T05242|T052 hypothetical protein F18A5.120 -
Arabidopsis thaliana, partial (21%)
Length = 784
Score = 395 bits (1015), Expect = e-110
Identities = 204/233 (87%), Positives = 204/233 (87%)
Frame = +1
Query: 1 MAKKRVPDWLNSPMWSSPTEQNRFSATSYPSEPPSPPPVTVVEDPPSIHNAITTSPPSSS 60
MAKKRVPDWLNSPMWSSPTEQNRFSATSYPSEPPSPPPVTVVEDPPSIHNAITTSPPSSS
Sbjct: 58 MAKKRVPDWLNSPMWSSPTEQNRFSATSYPSEPPSPPPVTVVEDPPSIHNAITTSPPSSS 237
Query: 61 SSSASTSSTDDMSISRLAQSQSQLLAEVPFTLKSKCL*LLFSIQLY*YC*LFVY**LSRK 120
SSSASTSSTDDMSISRLAQSQSQLLAE LSRK
Sbjct: 238 SSSASTSSTDDMSISRLAQSQSQLLAE-----------------------------LSRK 330
Query: 121 VIDMRELRKIASQGIPDSPGLRSTIWKLLLGYLPPDRSLWSSELAKKRSQYKRFKQDILI 180
VIDMRELRKIASQGIPDSPGLRSTIWKLLLGYLPPDRSLWSSELAKKRSQYKRFKQDILI
Sbjct: 331 VIDMRELRKIASQGIPDSPGLRSTIWKLLLGYLPPDRSLWSSELAKKRSQYKRFKQDILI 510
Query: 181 NPSEITRRMFNSASYDADDVKCETRGMLSRSQITHGEHPLSLGKTSIWNQFFQ 233
NPSEITRRMFNSASYDADDVKCETRGMLSRSQITHGEHPLSLGKTSIWNQFFQ
Sbjct: 511 NPSEITRRMFNSASYDADDVKCETRGMLSRSQITHGEHPLSLGKTSIWNQFFQ 669
Score = 38.5 bits (88), Expect = 0.005
Identities = 17/26 (65%), Positives = 19/26 (72%)
Frame = +2
Query: 368 TKVNPQFYAFRWITLLLTQEFDFADS 393
++ P F WITLLLTQEFDFADS
Sbjct: 665 SRSTPNFMHLGWITLLLTQEFDFADS 742
>BM815354 similar to PIR|T05242|T05 hypothetical protein F18A5.120 -
Arabidopsis thaliana, partial (31%)
Length = 494
Score = 320 bits (819), Expect = 9e-88
Identities = 156/157 (99%), Positives = 156/157 (99%)
Frame = +3
Query: 183 SEITRRMFNSASYDADDVKCETRGMLSRSQITHGEHPLSLGKTSIWNQFFQDTDIIEQID 242
SEITRRMFNSASYDADDVKCETRGMLSRSQITHGEHPLSLGKTSIWNQFFQDTDIIEQID
Sbjct: 24 SEITRRMFNSASYDADDVKCETRGMLSRSQITHGEHPLSLGKTSIWNQFFQDTDIIEQID 203
Query: 243 RDVKRTHPDMHFFCGDSQLAKSNQEALKNILIIFAKLNPGIRYVQGMNEVLAPLFYVFKN 302
RDVKRTHPDMHFFCGDSQLAKSNQEALKNILIIFAKLNPGIRYVQGMNEVLAPLFYVFKN
Sbjct: 204 RDVKRTHPDMHFFCGDSQLAKSNQEALKNILIIFAKLNPGIRYVQGMNEVLAPLFYVFKN 383
Query: 303 DPDEENAAFSEADTFFCFVELLSGFRDNFCQQLDNSI 339
DPDEENAAFSEADTFFCFVELLSGFRDNF QQLDNSI
Sbjct: 384 DPDEENAAFSEADTFFCFVELLSGFRDNFWQQLDNSI 494
>AW586232 similar to PIR|T05242|T05 hypothetical protein F18A5.120 -
Arabidopsis thaliana, partial (30%)
Length = 529
Score = 162 bits (411), Expect = 2e-40
Identities = 74/88 (84%), Positives = 84/88 (95%)
Frame = +1
Query: 321 VELLSGFRDNFCQQLDNSIVGIRSTITRLSQLLKEHDEELWRHLEVTTKVNPQFYAFRWI 380
VELLSG RDNF QQLDNS+VGIRSTIT+LSQLL++HDEELWRHLE+T+K+NPQFYAFRWI
Sbjct: 1 VELLSGLRDNFVQQLDNSVVGIRSTITKLSQLLRKHDEELWRHLEITSKINPQFYAFRWI 180
Query: 381 TLLLTQEFDFADSLRIWDTLVSDPDGPQ 408
TLLLTQEF+FADSL IWDTL+ DP+GPQ
Sbjct: 181 TLLLTQEFNFADSLHIWDTLLGDPEGPQ 264
>TC88302 similar to GP|8953714|dbj|BAA98077.1 contains similarity to GTPase
activating protein~gene_id:F6N7.7 {Arabidopsis
thaliana}, complete
Length = 1198
Score = 70.1 bits (170), Expect = 2e-12
Identities = 39/148 (26%), Positives = 79/148 (53%)
Frame = +1
Query: 265 NQEALKNILIIFAKLNPGIRYVQGMNEVLAPLFYVFKNDPDEENAAFSEADTFFCFVELL 324
N L++IL+ ++ N + Y QGM+++L+P+ +V ++ E++ F+CFV L+
Sbjct: 394 NVNVLRDILLTYSFYNFDLGYCQGMSDLLSPILFVMED----------ESEAFWCFVSLM 543
Query: 325 SGFRDNFCQQLDNSIVGIRSTITRLSQLLKEHDEELWRHLEVTTKVNPQFYAFRWITLLL 384
NF + + G+ S + LS+L++ D L + + +N F+ FRWI +
Sbjct: 544 ERLGPNFNRDQN----GMHSQLFALSKLVELLDSPLHNYFKQRDCLN-YFFCFRWILIQF 708
Query: 385 TQEFDFADSLRIWDTLVSDPDGPQVQIY 412
+EF++ ++R+W+ L + + +Y
Sbjct: 709 KREFEYEKTMRLWEVLWTHYPSEHLHLY 792
Score = 30.4 bits (67), Expect = 1.3
Identities = 15/36 (41%), Positives = 21/36 (57%), Gaps = 2/36 (5%)
Frame = +3
Query: 142 RSTIWKLLLGYLPPDRSLWSSELAK--KRSQYKRFK 175
R+ +W LLLGY P D + E K K+S+Y+ K
Sbjct: 153 RNEVWGLLLGYYPYDSTYAEREFLKSVKKSEYETIK 260
>CB892263 similar to GP|13877621|gb Unknown protein {Arabidopsis thaliana},
partial (47%)
Length = 804
Score = 68.2 bits (165), Expect = 6e-12
Identities = 60/228 (26%), Positives = 98/228 (42%), Gaps = 13/228 (5%)
Frame = +2
Query: 117 LSRKVIDMRELRKIASQGIPDSPGLRSTIWKLLLGYLPPDRSLWSSELAKKRSQYKRFKQ 176
LS V+ + LR++A G+PD +R +W+LLLGY PP+ L +KR +Y
Sbjct: 182 LSGTVVILDNLRELAWSGVPDY--MRPKVWRLLLGYEPPNSDRKEGVLGRKRGEYL---- 343
Query: 177 DILINPSEITRRMFNSASYDADDVKCETRGMLSRSQITHGEHPLSLGKTSIWNQFFQDTD 236
D + S YD D + RS + +
Sbjct: 344 DCI------------SQYYDIPDSE--------RSD--------------------DEVN 403
Query: 237 IIEQIDRDVKRTHPDMHFFCGDSQLAKSNQEALKNILIIFAKLNPGIRYVQGMNEVLAPL 296
++ QI D RT PD+ FF + Q++L+ IL +A +P YVQG+N+++ P
Sbjct: 404 MLRQIAVDCPRTVPDVTFF-----QQQQVQKSLERILYAWAIRHPASGYVQGINDLVTPF 568
Query: 297 FYVF-------------KNDPDEENAAFSEADTFFCFVELLSGFRDNF 331
VF +D + + EAD ++C +LL G ++++
Sbjct: 569 LVVFISEHLEGGIDDWSMSDLSSDKISNVEADCYWCLSKLLDGMQEHY 712
>TC92335 similar to GP|14517422|gb|AAK62601.1 AT5g53570/MNC6_11 {Arabidopsis
thaliana}, partial (37%)
Length = 1077
Score = 66.6 bits (161), Expect = 2e-11
Identities = 41/132 (31%), Positives = 70/132 (52%)
Frame = +1
Query: 272 ILIIFAKLNPGIRYVQGMNEVLAPLFYVFKNDPDEENAAFSEADTFFCFVELLSGFRDNF 331
IL +A +P I Y QGM+++L+P+ V D + F+CFV + R NF
Sbjct: 22 ILEAYALYDPEIGYCQGMSDLLSPIICVVSEDHE----------AFWCFVGFMKKARQNF 171
Query: 332 CQQLDNSIVGIRSTITRLSQLLKEHDEELWRHLEVTTKVNPQFYAFRWITLLLTQEFDFA 391
+LD VGIR + +++++K D L+RHLE + F+ +R + +L +E F
Sbjct: 172 --RLDE--VGIRRQLDIVAKIIKFKDSHLFRHLE-KLQAEDCFFVYRMVVVLFRRELTFE 336
Query: 392 DSLRIWDTLVSD 403
+L +W+ + +D
Sbjct: 337 QTLCLWEVMWAD 372
>TC81063 similar to GP|13877621|gb|AAK43888.1 Unknown protein {Arabidopsis
thaliana}, partial (53%)
Length = 749
Score = 59.3 bits (142), Expect = 3e-09
Identities = 40/145 (27%), Positives = 72/145 (49%), Gaps = 13/145 (8%)
Frame = +2
Query: 234 DTDIIEQIDRDVKRTHPDMHFFCGDSQLAKSNQEALKNILIIFAKLNPGIRYVQGMNEVL 293
+ ++ QI D RT PD+ FF Q++L+ IL +A +P YVQG+N+++
Sbjct: 305 EISMLRQIAVDCPRTVPDVAFF-----QQPQVQKSLERILYAWAIRHPASGYVQGINDLV 469
Query: 294 APLFYVF-------------KNDPDEENAAFSEADTFFCFVELLSGFRDNFCQQLDNSIV 340
P F VF +D + + EAD ++C +LL G +D++ +
Sbjct: 470 TPFFVVFLSEYLEGSINNWTMSDLSSDKISNVEADCYWCLSKLLDGMQDHY----TFAQP 637
Query: 341 GIRSTITRLSQLLKEHDEELWRHLE 365
GI+ + +L +L++ D+ + H+E
Sbjct: 638 GIQRLVFKLKELVRRIDDPVSSHME 712
Score = 42.7 bits (99), Expect = 3e-04
Identities = 21/55 (38%), Positives = 34/55 (61%)
Frame = +1
Query: 117 LSRKVIDMRELRKIASQGIPDSPGLRSTIWKLLLGYLPPDRSLWSSELAKKRSQY 171
LS ++ + +LR++A G+PD +R T+W+LLLGY P + L +KR +Y
Sbjct: 91 LSGTMVILDKLRELAWSGVPDY--MRPTVWRLLLGYAPTNSDRREGVLRRKRLEY 249
>TC92258 similar to GP|9758258|dbj|BAB08757.1 contains similarity to GTPase
activating protein~gene_id:MBG8.4 {Arabidopsis
thaliana}, partial (38%)
Length = 727
Score = 52.8 bits (125), Expect = 3e-07
Identities = 34/128 (26%), Positives = 65/128 (50%)
Frame = +1
Query: 238 IEQIDRDVKRTHPDMHFFCGDSQLAKSNQEALKNILIIFAKLNPGIRYVQGMNEVLAPLF 297
+ QI DV RT + F+ L+K L +IL ++A ++ + Y QGM+++ +P+
Sbjct: 349 LHQIGLDVVRTDRTLVFYEKQENLSK-----LWDILAVYAWIDKEVGYGQGMSDLCSPMI 513
Query: 298 YVFKNDPDEENAAFSEADTFFCFVELLSGFRDNFCQQLDNSIVGIRSTITRLSQLLKEHD 357
+ + EAD F+CF L+ R NF + +G+ + ++ L+ + + D
Sbjct: 514 ILLDD----------EADAFWCFERLMRRLRGNF--RCTGRTLGVEAQLSNLASITQVID 657
Query: 358 EELWRHLE 365
+L +H+E
Sbjct: 658 PKLHKHIE 681
>TC90928 homologue to GP|21593435|gb|AAM65402.1 putative plant adhesion
molecule {Arabidopsis thaliana}, partial (66%)
Length = 1058
Score = 51.2 bits (121), Expect = 7e-07
Identities = 42/156 (26%), Positives = 69/156 (43%), Gaps = 1/156 (0%)
Frame = +2
Query: 247 RTHPDMHFFCGDSQLAKSNQEALKNILIIFAKLNPGIRYVQGMNEVLAPLFYVFKNDPDE 306
R D F C + Q +L N+L ++ + + YVQGM LA L ++
Sbjct: 74 RHFSDFPFTCILPENHGPGQRSLYNVLKAYSVFDREVGYVQGMG-FLAGLLLLY------ 232
Query: 307 ENAAFSEADTFFCFVELLSGFRDNFCQQLDNS-IVGIRSTITRLSQLLKEHDEELWRHLE 365
SE D F+ V LL G + L + + ++ + + +L++EH +L H
Sbjct: 233 ----MSEEDAFWLLVALLKGAVHAPMEGLYLAGLPLVQQYLFQFERLVREHLPKLGEHF- 397
Query: 366 VTTKVNPQFYAFRWITLLLTQEFDFADSLRIWDTLV 401
+NP YA +W + + F F +LRIWD +
Sbjct: 398 TQEMINPSMYASQWFITVFSYSFPFHLALRIWDVFL 505
>AW225627 similar to GP|18377650|gb unknown protein {Arabidopsis thaliana},
partial (16%)
Length = 455
Score = 49.7 bits (117), Expect = 2e-06
Identities = 25/78 (32%), Positives = 44/78 (56%)
Frame = +3
Query: 226 SIWNQFFQDTDIIEQIDRDVKRTHPDMHFFCGDSQLAKSNQEALKNILIIFAKLNPGIRY 285
S W++FF++ ++ +D+D+ R +P+ G Q L+ IL+++ +P Y
Sbjct: 3 STWSRFFRNAELERLVDQDLSRLYPEH----GSYFQTPGCQGMLRRILLLWCLKHPDCGY 170
Query: 286 VQGMNEVLAPLFYVFKND 303
QGM+E+LAP YV + D
Sbjct: 171 RQGMHELLAPFLYVLQVD 224
>BQ139629 similar to GP|15408841|dbj hypothetical protein~similar to
Arabidopsis thaliana chromosome 2 At2g43490, partial
(15%)
Length = 666
Score = 43.5 bits (101), Expect = 2e-04
Identities = 29/108 (26%), Positives = 55/108 (50%), Gaps = 2/108 (1%)
Frame = +1
Query: 293 LAPLFYVFKNDPDEENAAFSEADTFFCFVELLSGFRDNFCQQLDNSIVGIRSTITRLSQL 352
L+P +F+++ AD F+CF LL R+NF + ++ + L +
Sbjct: 1 LSPFVVIFEDN----------ADAFWCFEMLLRRMRENFKMEGPTRVM---KQLRALWHI 141
Query: 353 LKEHDEELWRHLEVTTKVNPQ--FYAFRWITLLLTQEFDFADSLRIWD 398
L+ D+EL+ HL +K+ + +AFR + +L +E F ++L +W+
Sbjct: 142 LELSDKELFAHL---SKIGAESLHFAFRMLLVLFRRELSFNEALSMWE 276
>TC85577 homologue to GP|6715512|gb|AAF26445.1| vacuolar H+-ATPase B subunit
{Nicotiana tabacum}, partial (14%)
Length = 841
Score = 37.7 bits (86), Expect = 0.008
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Frame = -1
Query: 10 LNSPMWSSPTEQNRFSATSYP---SEPPSPPPVTVVEDPP-SIHNAITTSPPSSSSSSAS 65
++S + SP+ S + P S+ PSP V+ V PP + NA + SPP+SS S A
Sbjct: 502 VSSTIAQSPSSSPTISPVATPPKSSQAPSPSAVSPVASPPVPVKNAPSPSPPASSDSPAV 323
Query: 66 TSSTDDMSIS 75
+ + SIS
Sbjct: 322 SPAVTPSSIS 293
>TC89538 weakly similar to GP|21689895|gb|AAM67508.1 unknown protein
{Arabidopsis thaliana}, partial (37%)
Length = 990
Score = 37.0 bits (84), Expect = 0.014
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 7/56 (12%)
Frame = +3
Query: 17 SPTEQNRFSATSYPSEP-------PSPPPVTVVEDPPSIHNAITTSPPSSSSSSAS 65
+P +RFS+T+ P+ P PSPPP + PPS + T PP SS+AS
Sbjct: 171 TPQPSSRFSSTAAPATPHPPPSATPSPPPPSSATPPPS---SATPPPPPPFSSTAS 329
>TC80366 similar to GP|13877617|gb|AAK43886.1 protein kinase-like protein
{Arabidopsis thaliana}, partial (16%)
Length = 814
Score = 37.0 bits (84), Expect = 0.014
Identities = 21/44 (47%), Positives = 25/44 (56%)
Frame = +3
Query: 30 PSEPPSPPPVTVVEDPPSIHNAITTSPPSSSSSSASTSSTDDMS 73
PS P +PPPVT PPS A +SPP S++ SA ST S
Sbjct: 39 PSTPANPPPVTPSAPPPST-PATPSSPPPSTTPSAPPPSTPSNS 167
Score = 31.2 bits (69), Expect = 0.79
Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 6/50 (12%)
Frame = +3
Query: 25 SATSYPSEPP------SPPPVTVVEDPPSIHNAITTSPPSSSSSSASTSS 68
S + PS PP +PPP T PPS SPPS ++ S S
Sbjct: 90 STPATPSSPPPSTTPSAPPPSTPSNSPPSPPTTPAISPPSGGGTTPSPPS 239
Score = 31.2 bits (69), Expect = 0.79
Identities = 23/60 (38%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Frame = +3
Query: 16 SSPTEQNRFSAT--SYPSEPPSPPPVTVVEDPPSIHNAITTSPPSSSSSSASTSSTDDMS 73
SSP SA S PS P PP T PPS T SPPS + S+ S + S
Sbjct: 108 SSPPPSTTPSAPPPSTPSNSPPSPPTTPAISPPS-GGGTTPSPPSRTPPSSDDSPSPPSS 284
Score = 29.6 bits (65), Expect = 2.3
Identities = 23/61 (37%), Positives = 29/61 (46%), Gaps = 2/61 (3%)
Frame = +3
Query: 11 NSPMWSSPTEQNRFSATSYPSEPPSPPPVTVV--EDPPSIHNAITTSPPSSSSSSASTSS 68
NSP SP S S PSPP T +D PS ++ T PPS SSS+ ++
Sbjct: 162 NSP--PSPPTTPAISPPSGGGTTPSPPSRTPPSSDDSPSPPSSKTPPPPSPPSSSSISTG 335
Query: 69 T 69
T
Sbjct: 336 T 338
>TC93450 similar to GP|8777354|dbj|BAA96944.1 microtubule-associated
protein-like {Arabidopsis thaliana}, partial (22%)
Length = 806
Score = 36.6 bits (83), Expect = 0.019
Identities = 25/76 (32%), Positives = 39/76 (50%)
Frame = +3
Query: 349 LSQLLKEHDEELWRHLEVTTKVNPQFYAFRWITLLLTQEFDFADSLRIWDTLVSDPDGPQ 408
L LL D L HL + +V PQ++ RW+ +L +EF L IWD + + D +
Sbjct: 111 LYHLLSLADSSLHSHL-LDLEVEPQYFYLRWLRVLFGREFSLDKLLVIWDEIFAS-DNSK 284
Query: 409 VQIYSFLPCIVFGFKV 424
V+ S I +GF++
Sbjct: 285 VE-SSADENIDYGFRI 329
>TC80046 similar to SP|P22699|GUN6_DICDI Endoglucanase precursor (EC
3.2.1.4) (Endo-1 4-beta-glucanase) (Spore germination
protein 270-6), partial (11%)
Length = 643
Score = 36.2 bits (82), Expect = 0.025
Identities = 19/58 (32%), Positives = 32/58 (54%), Gaps = 1/58 (1%)
Frame = +3
Query: 17 SPTEQNRFSATSYPSEPPSPPPVTVVED-PPSIHNAITTSPPSSSSSSASTSSTDDMS 73
+PTE + ++T +E P P T E PPS + T+PPS+ +S+ +T + + S
Sbjct: 414 TPTETSTETSTETSTETPPPSTETSTETTPPSTETSTETTPPSTETSTETTPPSTETS 587
Score = 28.9 bits (63), Expect = 3.9
Identities = 18/84 (21%), Positives = 35/84 (41%)
Frame = +3
Query: 6 VPDWLNSPMWSSPTEQNRFSATSYPSEPPSPPPVTVVEDPPSIHNAITTSPPSSSSSSAS 65
V D + + SPTE + ++T P+E T E P +T P+ +S+
Sbjct: 237 VTDTSTNTVSPSPTETSTETSTETPTE-------TSTETPTETSTETSTETPTETSTETP 395
Query: 66 TSSTDDMSISRLAQSQSQLLAEVP 89
T ++ + ++ ++ E P
Sbjct: 396 TETSTETPTETSTETSTETSTETP 467
Score = 28.1 bits (61), Expect = 6.7
Identities = 15/40 (37%), Positives = 22/40 (54%)
Frame = +3
Query: 27 TSYPSEPPSPPPVTVVEDPPSIHNAITTSPPSSSSSSAST 66
TS + PPS T PPS + T+PPS+ +S+ +T
Sbjct: 516 TSTETTPPSTETSTETT-PPSTETSTETTPPSTETSTENT 632
Score = 28.1 bits (61), Expect = 6.7
Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 7/64 (10%)
Frame = +3
Query: 17 SPTEQNRFSATSYPSEPPSPPPVTVVEDPP-------SIHNAITTSPPSSSSSSASTSST 69
+PTE + ++T P+E + P + P S + T PPS+ +S+ +T +
Sbjct: 330 TPTETSTETSTETPTETSTETPTETSTETPTETSTETSTETSTETPPPSTETSTETTPPS 509
Query: 70 DDMS 73
+ S
Sbjct: 510 TETS 521
>TC86742 similar to PIR|T01541|T01541 hypothetical protein A_IG005I10.16 -
Arabidopsis thaliana, partial (19%)
Length = 2073
Score = 35.0 bits (79), Expect = 0.055
Identities = 20/54 (37%), Positives = 25/54 (46%)
Frame = +3
Query: 13 PMWSSPTEQNRFSATSYPSEPPSPPPVTVVEDPPSIHNAITTSPPSSSSSSAST 66
P S PT + + TS PPSPPP T V P ++ + PP S S T
Sbjct: 720 PSPSPPTSSHPSTTTSSTPAPPSPPPSTTVFSP--LNTLLFPPPPIPSPSQTKT 875
>TC93280 weakly similar to GP|14190399|gb|AAK55680.1 AT3g06200/F28L1_14
{Arabidopsis thaliana}, partial (20%)
Length = 507
Score = 35.0 bits (79), Expect = 0.055
Identities = 21/71 (29%), Positives = 37/71 (51%)
Frame = +2
Query: 12 SPMWSSPTEQNRFSATSYPSEPPSPPPVTVVEDPPSIHNAITTSPPSSSSSSASTSSTDD 71
SP+ +PT N ++ + PSEP SP P P S+ +++S ++SA T S+
Sbjct: 143 SPLSKTPTAPNSYAL*NLPSEPTSPLP------PSSLTLTLSSSSSPVLAASAKTLSSQT 304
Query: 72 MSISRLAQSQS 82
+++ L + S
Sbjct: 305 SALTVLTSTSS 337
>TC80893 similar to GP|4557063|gb|AAD22502.1| expressed protein {Arabidopsis
thaliana}, partial (39%)
Length = 883
Score = 35.0 bits (79), Expect = 0.055
Identities = 26/73 (35%), Positives = 36/73 (48%), Gaps = 2/73 (2%)
Frame = -1
Query: 16 SSPTEQNRFSATSYPSEPPSPPPVTVVEDPPSIHNAITTSPP--SSSSSSASTSSTDDMS 73
SSP+ + S +S S P S PP + S + + S P SSSS S+S+S T S
Sbjct: 523 SSPSSSSSSSPSSSSSSPSSLPPAPLASGSSSGSPSSSPSSPE*SSSSPSSSSSCTSSSS 344
Query: 74 ISRLAQSQSQLLA 86
S + S S L +
Sbjct: 343 SSSSSSSVSLLFS 305
Score = 27.7 bits (60), Expect = 8.7
Identities = 28/96 (29%), Positives = 41/96 (42%), Gaps = 1/96 (1%)
Frame = -1
Query: 9 WLNSPMWSSPTEQNRFSATSYPSEPPSPPPVTVVEDPPS-IHNAITTSPPSSSSSSASTS 67
W S SS + + S +S S PS + PP+ + + ++ PSSS SS S
Sbjct: 568 WGVSSSSSSSSSSSSSSPSSSSSSSPSSSSSSPSSLPPAPLASGSSSGSPSSSPSSPE*S 389
Query: 68 STDDMSISRLAQSQSQLLAEVPFTLKSKCL*LLFSI 103
S+ S S S S + S + LLFS+
Sbjct: 388 SSSPSSSSSCTSSSSS-------SSSSSSVSLLFSL 302
>BQ751144 weakly similar to PIR|PQ0479|PQ04 pistil extensin-like protein
(clone pMG14) - common tobacco (fragment), partial (11%)
Length = 632
Score = 34.7 bits (78), Expect = 0.072
Identities = 25/63 (39%), Positives = 33/63 (51%), Gaps = 2/63 (3%)
Frame = +1
Query: 9 WLNSPMWSSPTEQNRFSATSYPSEPPS--PPPVTVVEDPPSIHNAITTSPPSSSSSSAST 66
+L SP+ S PT R S PS PPS P P ++ P+ A SPP+SS SS +
Sbjct: 124 FLLSPVPSWPTVVTRRRLLSLPSSPPSTSPSPHALLRS-PTAPPAAPLSPPASSPSSPTR 300
Query: 67 SST 69
S+
Sbjct: 301 PSS 309
Score = 28.9 bits (63), Expect = 3.9
Identities = 17/69 (24%), Positives = 29/69 (41%)
Frame = +1
Query: 1 MAKKRVPDWLNSPMWSSPTEQNRFSATSYPSEPPSPPPVTVVEDPPSIHNAITTSPPSSS 60
+ ++R+ +SP +SP+ + + P P PP + P + + PPS S
Sbjct: 160 VTRRRLLSLPSSPPSTSPSPHALLRSPTAPPAAPLSPPASSPSSPTRPSSLFSPPPPSPS 339
Query: 61 SSSASTSST 69
S ST
Sbjct: 340 RSRPPPPST 366
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.327 0.139 0.431
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,736,104
Number of Sequences: 36976
Number of extensions: 239744
Number of successful extensions: 6079
Number of sequences better than 10.0: 253
Number of HSP's better than 10.0 without gapping: 3605
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5219
length of query: 424
length of database: 9,014,727
effective HSP length: 99
effective length of query: 325
effective length of database: 5,354,103
effective search space: 1740083475
effective search space used: 1740083475
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 60 (27.7 bits)
Medicago: description of AC146683.4