TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146664.9 - phase: 0 
         (59 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

BQ149736 GP|21166054|gb hypothetical protein {Dictyostelium disc...    69  4e-13
TC81294 weakly similar to PIR|E96501|E96501 hypothetical protein...    59  5e-10
AW736112 weakly similar to GP|6728972|gb| unknown protein {Arabi...    37  0.001
BF648767                                                               35  0.004
CA923110 similar to GP|17529326|gb unknown protein {Arabidopsis ...    27  1.2
BM814721 homologue to GP|14597044|em unnamed protein product {Ar...    27  1.2
BG646666 similar to PIR|T48087|T48 transport inhibitor response ...    27  1.6
AW127239 weakly similar to SP|Q9FPQ6|GP1_C Vegetative cell wall ...    25  7.9
TC77637 similar to GP|15292697|gb|AAK92717.1 putative RNA-bindin...    25  7.9

>BQ149736 GP|21166054|gb hypothetical protein {Dictyostelium discoideum},
           partial (3%)
          Length = 578

 Score = 68.9 bits (167), Expect = 4e-13
 Identities = 30/50 (60%), Positives = 37/50 (74%)
 Frame = +1

Query: 1   MGHLSTLACPKVHEEARYLPNMISANFLQKSTVWPESFKNSGTNNFSIGI 50
           MGHLSTL CPKV EEAR++P+++    LQ+S VWP SFK  GTNN  I +
Sbjct: 427 MGHLSTLXCPKVLEEARHIPDVLYGELLQRSXVWPXSFKKFGTNNMXIXL 576


>TC81294 weakly similar to PIR|E96501|E96501 hypothetical protein F28H19.3
           [imported] - Arabidopsis thaliana, partial (9%)
          Length = 1154

 Score = 58.5 bits (140), Expect = 5e-10
 Identities = 27/59 (45%), Positives = 39/59 (65%)
 Frame = +2

Query: 1   MGHLSTLACPKVHEEARYLPNMISANFLQKSTVWPESFKNSGTNNFSIGIYFLSPHNPR 59
           + HLS +A PKV +E ++ P+++SA+ L +S VWP SFK  G  + SI +YF  P N R
Sbjct: 773 LAHLSNIASPKVLDEMKFFPHVLSADLLPRSEVWPNSFKEEGPTDESIALYFF-PGNRR 946


>AW736112 weakly similar to GP|6728972|gb| unknown protein {Arabidopsis
           thaliana}, partial (12%)
          Length = 585

 Score = 37.4 bits (85), Expect = 0.001
 Identities = 17/52 (32%), Positives = 26/52 (49%)
 Frame = +3

Query: 3   HLSTLACPKVHEEARYLPNMISANFLQKSTVWPESFKNSGTNNFSIGIYFLS 54
           HLS+ A PKV E        +S N + + + WP  F + G    +I +YF +
Sbjct: 120 HLSSSASPKVLEVVTKFSPEVSLNEVSRLSTWPSQFHHGGAREDNIALYFFA 275


>BF648767 
          Length = 544

 Score = 35.4 bits (80), Expect = 0.004
 Identities = 16/31 (51%), Positives = 20/31 (63%)
 Frame = +3

Query: 1   MGHLSTLACPKVHEEARYLPNMISANFLQKS 31
           M HLS L CPKV +E   LP+++SA  L  S
Sbjct: 450 MAHLSDLXCPKVWKETELLPDVLSAXLLPXS 542


>CA923110 similar to GP|17529326|gb unknown protein {Arabidopsis thaliana},
           partial (36%)
          Length = 799

 Score = 27.3 bits (59), Expect = 1.2
 Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = +3

Query: 3   HLSTLACPKVHEEARYLPNMISAN-FLQKSTVWPESFKNSGT 43
           HL+T A P  H    ++PN+ + N ++ K TV PE  +NS +
Sbjct: 318 HLNTYA*PSFHVYGMFMPNIAATNEYIDKQTV-PE-LRNSSS 437


>BM814721 homologue to GP|14597044|em unnamed protein product {Arabidopsis
           thaliana}, partial (17%)
          Length = 771

 Score = 27.3 bits (59), Expect = 1.2
 Identities = 12/45 (26%), Positives = 22/45 (48%)
 Frame = +1

Query: 13  HEEARYLPNMISANFLQKSTVWPESFKNSGTNNFSIGIYFLSPHN 57
           H +      +IS + L  + ++ E+F N G+N+F      +  HN
Sbjct: 565 HHDQSQFQGLISLSELNNNNMFSENFNNEGSNDFFSENSIMFDHN 699


>BG646666 similar to PIR|T48087|T48 transport inhibitor response protein TIR1
           [imported] - Arabidopsis thaliana, partial (20%)
          Length = 764

 Score = 26.9 bits (58), Expect = 1.6
 Identities = 13/42 (30%), Positives = 25/42 (58%), Gaps = 2/42 (4%)
 Frame = -1

Query: 9   CPKV--HEEARYLPNMISANFLQKSTVWPESFKNSGTNNFSI 48
           CP +  H ++R   + +   FL + T+WP  +++S  N+F+I
Sbjct: 347 CPYITRHVQSRPRNSPVYI*FLHRITIWP*IWRSSFINDFNI 222


>AW127239 weakly similar to SP|Q9FPQ6|GP1_C Vegetative cell wall protein gp1
           precursor (Hydroxyproline-rich glycoprotein 1)., partial
           (5%)
          Length = 362

 Score = 24.6 bits (52), Expect = 7.9
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +1

Query: 24  SANFLQKSTVWPESFKNSGTNNFSIGIYFLSPH 56
           S++F+  STV  +S  NS +  F+ G     PH
Sbjct: 247 SSSFVASSTVSVKSKSNSRSGTFAGGFNITKPH 345


>TC77637 similar to GP|15292697|gb|AAK92717.1 putative RNA-binding protein
            {Arabidopsis thaliana}, partial (59%)
          Length = 1724

 Score = 24.6 bits (52), Expect = 7.9
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -1

Query: 9    CPKVHEEARYLPNMISANFLQKS 31
            CP++ EE +  P++   +FLQ S
Sbjct: 1451 CPEIGEELQLTPSIAKMHFLQHS 1383


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.318    0.133    0.418 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,125,265
Number of Sequences: 36976
Number of extensions: 20688
Number of successful extensions: 108
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 108
length of query: 59
length of database: 9,014,727
effective HSP length: 35
effective length of query: 24
effective length of database: 7,720,567
effective search space: 185293608
effective search space used: 185293608
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 51 (24.3 bits)